####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS243_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS243_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 17 - 37 4.67 11.18 LONGEST_CONTINUOUS_SEGMENT: 21 18 - 38 4.76 10.75 LCS_AVERAGE: 43.13 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 19 - 29 1.97 9.92 LCS_AVERAGE: 18.70 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.49 10.59 LCS_AVERAGE: 14.57 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 9 3 7 12 13 13 14 14 15 15 16 17 18 19 20 23 25 27 28 29 32 LCS_GDT V 3 V 3 4 6 9 3 4 4 5 6 14 14 15 15 16 17 19 19 21 24 27 29 30 34 35 LCS_GDT Q 4 Q 4 4 6 15 3 4 4 5 6 7 7 8 9 10 13 17 20 21 24 26 29 31 34 35 LCS_GDT G 5 G 5 4 6 19 0 4 4 5 6 7 7 8 9 12 12 16 18 19 21 26 27 31 34 35 LCS_GDT P 6 P 6 4 6 19 2 3 4 5 6 7 8 10 12 14 15 16 18 19 23 26 26 31 34 35 LCS_GDT W 7 W 7 4 6 19 0 3 4 5 6 7 8 10 12 14 15 17 18 21 24 28 29 31 34 35 LCS_GDT V 8 V 8 3 4 19 1 3 3 5 6 10 11 14 15 16 21 23 24 26 28 30 31 32 34 35 LCS_GDT G 9 G 9 8 10 19 5 7 8 11 13 14 14 15 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT S 10 S 10 8 10 19 5 7 8 9 10 11 12 14 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT S 11 S 11 8 10 19 5 7 8 9 10 11 11 14 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT Y 12 Y 12 8 10 19 5 7 8 9 10 11 11 14 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT V 13 V 13 8 10 19 5 7 8 9 10 11 11 14 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT A 14 A 14 8 10 19 5 7 8 9 10 11 11 15 16 18 19 21 24 26 28 30 31 32 34 35 LCS_GDT E 15 E 15 8 10 19 4 4 7 9 10 11 11 15 16 18 19 21 22 24 26 26 30 32 33 33 LCS_GDT T 16 T 16 8 10 19 4 7 8 9 10 11 11 15 16 18 19 21 24 26 28 30 31 32 34 35 LCS_GDT G 17 G 17 4 10 21 4 4 4 5 8 9 10 15 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT Q 18 Q 18 4 10 21 5 6 8 9 10 11 11 15 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT N 19 N 19 4 11 21 3 4 4 8 10 10 12 15 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT W 20 W 20 10 11 21 9 10 12 13 13 14 14 15 16 18 19 21 24 25 28 30 31 32 34 35 LCS_GDT A 21 A 21 10 11 21 9 10 12 13 13 14 14 15 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT S 22 S 22 10 11 21 9 10 12 13 13 14 14 15 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT L 23 L 23 10 11 21 9 10 12 13 13 14 14 15 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT A 24 A 24 10 11 21 9 10 12 13 13 14 14 15 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT A 25 A 25 10 11 21 9 10 12 13 13 14 14 15 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT N 26 N 26 10 11 21 9 10 12 13 13 14 14 15 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT E 27 E 27 10 11 21 9 10 12 13 13 14 14 15 16 17 21 23 24 26 28 30 31 32 34 35 LCS_GDT L 28 L 28 10 11 21 9 10 12 13 13 14 14 15 15 16 19 22 24 25 28 30 31 32 34 35 LCS_GDT R 29 R 29 10 11 21 4 10 12 13 13 14 14 15 16 17 19 22 24 25 28 29 31 32 34 35 LCS_GDT V 30 V 30 5 6 21 4 5 5 5 6 9 12 14 16 17 21 23 24 26 28 30 31 32 34 35 LCS_GDT T 31 T 31 5 6 21 4 5 5 6 7 9 12 14 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT E 32 E 32 5 6 21 4 5 5 6 7 9 12 14 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT R 33 R 33 5 6 21 4 5 5 5 5 9 12 15 16 18 20 23 24 26 28 30 31 32 34 35 LCS_GDT P 34 P 34 5 6 21 4 5 5 5 5 9 12 15 16 18 18 21 22 25 27 28 29 32 33 35 LCS_GDT F 35 F 35 3 4 21 0 3 4 5 6 8 11 15 16 18 20 22 24 26 28 30 31 32 34 35 LCS_GDT W 36 W 36 6 7 21 4 4 6 7 10 10 10 13 15 18 20 23 24 26 28 30 31 32 34 35 LCS_GDT I 37 I 37 6 7 21 4 4 12 13 13 14 14 15 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT S 38 S 38 6 7 21 4 8 12 13 13 14 14 15 16 18 21 23 24 26 28 30 31 32 34 35 LCS_GDT S 39 S 39 6 7 16 4 4 6 8 10 10 11 15 16 18 19 22 24 26 28 30 31 32 33 34 LCS_GDT F 40 F 40 6 7 16 4 4 6 8 10 10 11 15 16 18 19 21 22 25 28 30 31 32 33 33 LCS_GDT I 41 I 41 6 7 16 4 4 6 8 10 11 12 12 14 17 19 21 22 24 26 27 29 31 33 33 LCS_GDT G 42 G 42 4 7 16 3 4 5 5 7 9 11 11 13 15 17 21 22 23 26 27 28 29 31 32 LCS_GDT R 43 R 43 4 6 16 3 4 5 5 6 6 7 11 13 15 17 17 21 22 24 27 28 29 30 31 LCS_GDT S 44 S 44 4 6 16 3 4 5 5 6 6 7 8 11 13 14 14 15 16 16 23 24 25 29 29 LCS_GDT K 45 K 45 3 6 16 3 3 5 5 6 6 7 7 9 10 11 13 15 16 16 23 24 25 29 29 LCS_AVERAGE LCS_A: 25.46 ( 14.57 18.70 43.13 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 10 12 13 13 14 14 15 16 18 21 23 24 26 28 30 31 32 34 35 GDT PERCENT_AT 20.45 22.73 27.27 29.55 29.55 31.82 31.82 34.09 36.36 40.91 47.73 52.27 54.55 59.09 63.64 68.18 70.45 72.73 77.27 79.55 GDT RMS_LOCAL 0.21 0.49 0.91 1.01 1.01 1.30 1.30 1.68 3.30 3.54 4.10 4.40 4.50 4.78 5.11 5.38 5.53 5.68 6.50 6.58 GDT RMS_ALL_AT 10.63 10.59 10.57 10.61 10.61 10.70 10.70 10.43 12.17 12.21 9.38 9.67 9.81 9.93 9.48 9.65 9.53 9.67 9.88 9.98 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 27 E 27 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 1.333 0 0.631 0.600 4.549 36.364 39.273 - LGA V 3 V 3 3.489 0 0.118 0.161 5.630 17.273 20.000 4.457 LGA Q 4 Q 4 9.180 0 0.645 1.565 10.532 0.000 0.000 9.289 LGA G 5 G 5 13.244 0 0.024 0.024 13.244 0.000 0.000 - LGA P 6 P 6 13.174 0 0.682 0.591 16.662 0.000 0.000 16.662 LGA W 7 W 7 7.461 0 0.460 1.145 12.004 0.000 0.000 11.492 LGA V 8 V 8 5.586 0 0.656 1.477 5.974 7.273 4.156 5.427 LGA G 9 G 9 3.795 0 0.535 0.535 7.559 4.091 4.091 - LGA S 10 S 10 10.676 0 0.107 0.669 14.133 0.000 0.000 13.000 LGA S 11 S 11 14.335 0 0.021 0.658 16.589 0.000 0.000 16.589 LGA Y 12 Y 12 12.042 0 0.107 1.250 13.507 0.000 0.000 9.512 LGA V 13 V 13 11.818 0 0.063 0.121 15.726 0.000 0.000 13.387 LGA A 14 A 14 19.153 0 0.083 0.082 21.710 0.000 0.000 - LGA E 15 E 15 21.332 0 0.163 0.216 27.618 0.000 0.000 27.618 LGA T 16 T 16 16.687 0 0.098 0.135 17.946 0.000 0.000 13.710 LGA G 17 G 17 13.292 0 0.131 0.131 14.429 0.000 0.000 - LGA Q 18 Q 18 10.807 0 0.624 1.092 17.296 0.000 0.000 14.107 LGA N 19 N 19 6.772 0 0.093 0.977 10.433 1.364 0.682 10.266 LGA W 20 W 20 0.453 0 0.616 0.476 8.512 80.000 25.974 8.456 LGA A 21 A 21 0.667 0 0.063 0.062 1.227 95.455 89.455 - LGA S 22 S 22 1.099 0 0.061 0.619 1.964 77.727 68.788 1.964 LGA L 23 L 23 1.292 0 0.041 0.113 3.045 69.545 51.591 2.939 LGA A 24 A 24 1.041 0 0.028 0.028 1.172 73.636 72.000 - LGA A 25 A 25 0.527 0 0.024 0.024 0.615 90.909 89.091 - LGA N 26 N 26 0.448 0 0.046 0.089 1.109 90.909 84.318 0.745 LGA E 27 E 27 1.469 0 0.042 1.030 6.630 61.818 34.343 6.630 LGA L 28 L 28 1.582 0 0.185 1.408 6.731 70.000 40.682 4.100 LGA R 29 R 29 1.034 0 0.314 1.003 10.432 40.909 21.157 10.432 LGA V 30 V 30 7.936 0 0.592 0.530 11.901 0.000 0.000 11.901 LGA T 31 T 31 10.516 0 0.151 0.275 14.400 0.000 0.000 12.340 LGA E 32 E 32 14.313 0 0.173 0.794 17.172 0.000 0.000 17.172 LGA R 33 R 33 14.502 0 0.045 1.116 18.127 0.000 0.000 10.797 LGA P 34 P 34 14.628 0 0.137 0.168 15.711 0.000 0.000 15.711 LGA F 35 F 35 12.131 0 0.600 1.266 15.854 0.000 0.000 15.715 LGA W 36 W 36 8.694 0 0.621 1.012 17.982 0.000 0.000 17.506 LGA I 37 I 37 1.795 0 0.099 0.984 4.651 47.727 31.136 3.961 LGA S 38 S 38 0.370 0 0.108 0.654 4.101 49.545 40.303 4.101 LGA S 39 S 39 7.284 0 0.162 0.195 10.501 0.455 0.303 9.628 LGA F 40 F 40 9.078 0 0.114 1.715 12.653 0.000 0.000 9.099 LGA I 41 I 41 10.426 0 0.606 0.571 12.375 0.000 0.000 9.113 LGA G 42 G 42 13.942 0 0.097 0.097 15.412 0.000 0.000 - LGA R 43 R 43 12.615 0 0.051 1.104 13.542 0.000 0.000 8.412 LGA S 44 S 44 16.108 0 0.030 0.683 17.350 0.000 0.000 15.914 LGA K 45 K 45 17.200 0 0.029 0.782 21.603 0.000 0.000 21.603 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.080 9.057 10.224 20.795 16.303 5.351 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 15 1.68 38.636 33.074 0.841 LGA_LOCAL RMSD: 1.684 Number of atoms: 15 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.428 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.080 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.756921 * X + -0.031485 * Y + 0.652747 * Z + 12.388803 Y_new = 0.604056 * X + -0.414856 * Y + 0.680449 * Z + 34.816387 Z_new = 0.249372 * X + 0.909342 * Y + 0.333032 * Z + 9.430206 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.468045 -0.252031 1.219733 [DEG: 141.4086 -14.4403 69.8856 ] ZXZ: 2.376970 1.231279 0.267653 [DEG: 136.1903 70.5471 15.3354 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS243_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS243_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 15 1.68 33.074 9.08 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS243_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 12 N ALA 2 11.343 37.007 13.148 1.00 11.30 ATOM 13 CA ALA 2 10.854 36.972 14.490 1.00 11.30 ATOM 14 C ALA 2 9.698 36.015 14.572 1.00 11.30 ATOM 15 O ALA 2 9.493 35.376 15.602 1.00 11.30 ATOM 17 CB ALA 2 10.444 38.366 14.941 1.00 11.30 ATOM 18 N VAL 3 8.871 35.917 13.512 1.00 10.09 ATOM 19 CA VAL 3 7.743 35.025 13.599 1.00 10.09 ATOM 20 C VAL 3 8.167 33.642 13.179 1.00 10.09 ATOM 21 O VAL 3 8.386 33.363 12.001 1.00 10.09 ATOM 23 CB VAL 3 6.566 35.520 12.737 1.00 10.09 ATOM 24 CG1 VAL 3 5.403 34.542 12.817 1.00 10.09 ATOM 25 CG2 VAL 3 6.130 36.908 13.177 1.00 10.09 ATOM 26 N GLN 4 8.296 32.741 14.174 1.00 9.83 ATOM 27 CA GLN 4 8.777 31.392 14.004 1.00 9.83 ATOM 28 C GLN 4 7.798 30.501 13.298 1.00 9.83 ATOM 29 O GLN 4 8.203 29.643 12.514 1.00 9.83 ATOM 31 CB GLN 4 9.123 30.772 15.359 1.00 9.83 ATOM 32 CD GLN 4 11.090 29.403 14.557 1.00 9.83 ATOM 33 CG GLN 4 9.750 29.390 15.267 1.00 9.83 ATOM 34 OE1 GLN 4 11.995 30.147 14.934 1.00 9.83 ATOM 37 NE2 GLN 4 11.219 28.577 13.525 1.00 9.83 ATOM 38 N GLY 5 6.491 30.664 13.576 1.00 9.42 ATOM 39 CA GLY 5 5.509 29.752 13.051 1.00 9.42 ATOM 40 C GLY 5 5.232 30.037 11.606 1.00 9.42 ATOM 41 O GLY 5 5.613 31.061 11.042 1.00 9.42 ATOM 43 N PRO 6 4.512 29.105 11.031 1.00 8.91 ATOM 44 CA PRO 6 4.165 29.137 9.633 1.00 8.91 ATOM 45 C PRO 6 3.555 30.461 9.309 1.00 8.91 ATOM 46 O PRO 6 2.716 30.941 10.065 1.00 8.91 ATOM 47 CB PRO 6 3.172 27.985 9.471 1.00 8.91 ATOM 48 CD PRO 6 3.939 27.834 11.733 1.00 8.91 ATOM 49 CG PRO 6 3.552 27.011 10.536 1.00 8.91 ATOM 50 N TRP 7 3.948 31.052 8.170 1.00 9.44 ATOM 51 CA TRP 7 3.514 32.364 7.808 1.00 9.44 ATOM 52 C TRP 7 2.234 32.277 7.050 1.00 9.44 ATOM 53 O TRP 7 1.809 31.212 6.609 1.00 9.44 ATOM 55 CB TRP 7 4.588 33.076 6.984 1.00 9.44 ATOM 58 CG TRP 7 5.835 33.379 7.758 1.00 9.44 ATOM 59 CD1 TRP 7 5.940 34.167 8.867 1.00 9.44 ATOM 61 NE1 TRP 7 7.244 34.208 9.299 1.00 9.44 ATOM 62 CD2 TRP 7 7.155 32.898 7.480 1.00 9.44 ATOM 63 CE2 TRP 7 8.009 33.435 8.460 1.00 9.44 ATOM 64 CH2 TRP 7 9.881 32.351 7.516 1.00 9.44 ATOM 65 CZ2 TRP 7 9.377 33.167 8.489 1.00 9.44 ATOM 66 CE3 TRP 7 7.699 32.065 6.497 1.00 9.44 ATOM 67 CZ3 TRP 7 9.055 31.802 6.529 1.00 9.44 ATOM 68 N VAL 8 1.562 33.431 6.937 1.00 11.03 ATOM 69 CA VAL 8 0.316 33.558 6.255 1.00 11.03 ATOM 70 C VAL 8 0.580 33.633 4.777 1.00 11.03 ATOM 71 O VAL 8 1.697 33.925 4.350 1.00 11.03 ATOM 73 CB VAL 8 -0.470 34.790 6.741 1.00 11.03 ATOM 74 CG1 VAL 8 -0.774 34.676 8.226 1.00 11.03 ATOM 75 CG2 VAL 8 0.305 36.065 6.447 1.00 11.03 ATOM 76 N GLY 9 -0.443 33.322 3.947 1.00 10.77 ATOM 77 CA GLY 9 -0.289 33.385 2.516 1.00 10.77 ATOM 78 C GLY 9 -1.474 34.096 1.940 1.00 10.77 ATOM 79 O GLY 9 -2.556 34.106 2.525 1.00 10.77 ATOM 81 N SER 10 -1.284 34.734 0.767 1.00 11.31 ATOM 82 CA SER 10 -2.350 35.455 0.139 1.00 11.31 ATOM 83 C SER 10 -3.398 34.511 -0.357 1.00 11.31 ATOM 84 O SER 10 -4.588 34.739 -0.155 1.00 11.31 ATOM 86 CB SER 10 -1.814 36.311 -1.011 1.00 11.31 ATOM 88 OG SER 10 -2.860 37.019 -1.651 1.00 11.31 ATOM 89 N SER 11 -2.986 33.425 -1.039 1.00 11.95 ATOM 90 CA SER 11 -3.939 32.482 -1.555 1.00 11.95 ATOM 91 C SER 11 -4.554 31.704 -0.436 1.00 11.95 ATOM 92 O SER 11 -5.761 31.458 -0.429 1.00 11.95 ATOM 94 CB SER 11 -3.271 31.541 -2.561 1.00 11.95 ATOM 96 OG SER 11 -2.851 32.244 -3.717 1.00 11.95 ATOM 97 N TYR 12 -3.743 31.295 0.559 1.00 11.83 ATOM 98 CA TYR 12 -4.332 30.437 1.537 1.00 11.83 ATOM 99 C TYR 12 -5.362 31.199 2.288 1.00 11.83 ATOM 100 O TYR 12 -6.474 30.709 2.427 1.00 11.83 ATOM 102 CB TYR 12 -3.260 29.879 2.477 1.00 11.83 ATOM 103 CG TYR 12 -2.342 28.870 1.827 1.00 11.83 ATOM 105 OH TYR 12 0.198 26.099 0.047 1.00 11.83 ATOM 106 CZ TYR 12 -0.645 27.015 0.635 1.00 11.83 ATOM 107 CD1 TYR 12 -0.977 28.881 2.085 1.00 11.83 ATOM 108 CE1 TYR 12 -0.130 27.961 1.496 1.00 11.83 ATOM 109 CD2 TYR 12 -2.843 27.909 0.958 1.00 11.83 ATOM 110 CE2 TYR 12 -2.010 26.981 0.359 1.00 11.83 ATOM 111 N VAL 13 -5.059 32.448 2.691 1.00 11.14 ATOM 112 CA VAL 13 -5.915 33.216 3.552 1.00 11.14 ATOM 113 C VAL 13 -7.278 33.429 3.000 1.00 11.14 ATOM 114 O VAL 13 -8.240 33.390 3.764 1.00 11.14 ATOM 116 CB VAL 13 -5.301 34.592 3.875 1.00 11.14 ATOM 117 CG1 VAL 13 -6.309 35.465 4.607 1.00 11.14 ATOM 118 CG2 VAL 13 -4.034 34.429 4.700 1.00 11.14 ATOM 119 N ALA 14 -7.419 33.657 1.682 1.00 9.56 ATOM 120 CA ALA 14 -8.719 34.059 1.227 1.00 9.56 ATOM 121 C ALA 14 -9.778 33.041 1.542 1.00 9.56 ATOM 122 O ALA 14 -10.754 33.378 2.210 1.00 9.56 ATOM 124 CB ALA 14 -8.699 34.321 -0.272 1.00 9.56 ATOM 125 N GLU 15 -9.648 31.781 1.079 1.00 10.49 ATOM 126 CA GLU 15 -10.676 30.839 1.434 1.00 10.49 ATOM 127 C GLU 15 -10.475 30.254 2.817 1.00 10.49 ATOM 128 O GLU 15 -11.220 30.531 3.756 1.00 10.49 ATOM 130 CB GLU 15 -10.738 29.704 0.409 1.00 10.49 ATOM 131 CD GLU 15 -13.221 29.262 0.555 1.00 10.49 ATOM 132 CG GLU 15 -11.828 28.680 0.684 1.00 10.49 ATOM 133 OE1 GLU 15 -13.364 30.323 -0.089 1.00 10.49 ATOM 134 OE2 GLU 15 -14.170 28.658 1.098 1.00 10.49 ATOM 135 N THR 16 -9.406 29.429 2.932 1.00 9.31 ATOM 136 CA THR 16 -8.988 28.600 4.044 1.00 9.31 ATOM 137 C THR 16 -8.274 29.323 5.138 1.00 9.31 ATOM 138 O THR 16 -8.408 29.014 6.320 1.00 9.31 ATOM 140 CB THR 16 -8.068 27.456 3.580 1.00 9.31 ATOM 142 OG1 THR 16 -6.896 28.001 2.962 1.00 9.31 ATOM 143 CG2 THR 16 -8.784 26.573 2.570 1.00 9.31 ATOM 144 N GLY 17 -7.498 30.321 4.731 1.00 9.02 ATOM 145 CA GLY 17 -6.531 31.064 5.460 1.00 9.02 ATOM 146 C GLY 17 -7.151 31.778 6.593 1.00 9.02 ATOM 147 O GLY 17 -6.422 32.135 7.492 1.00 9.02 ATOM 149 N GLN 18 -8.459 32.075 6.600 1.00 8.98 ATOM 150 CA GLN 18 -8.973 32.859 7.695 1.00 8.98 ATOM 151 C GLN 18 -8.643 32.181 8.998 1.00 8.98 ATOM 152 O GLN 18 -8.336 32.844 9.988 1.00 8.98 ATOM 154 CB GLN 18 -10.482 33.059 7.550 1.00 8.98 ATOM 155 CD GLN 18 -12.381 34.062 6.220 1.00 8.98 ATOM 156 CG GLN 18 -10.879 33.980 6.408 1.00 8.98 ATOM 157 OE1 GLN 18 -13.107 33.114 6.522 1.00 8.98 ATOM 160 NE2 GLN 18 -12.853 35.199 5.721 1.00 8.98 ATOM 161 N ASN 19 -8.684 30.838 9.020 1.00 8.58 ATOM 162 CA ASN 19 -8.304 30.103 10.192 1.00 8.58 ATOM 163 C ASN 19 -6.826 30.271 10.420 1.00 8.58 ATOM 164 O ASN 19 -6.383 30.553 11.534 1.00 8.58 ATOM 166 CB ASN 19 -8.693 28.630 10.050 1.00 8.58 ATOM 167 CG ASN 19 -10.187 28.406 10.172 1.00 8.58 ATOM 168 OD1 ASN 19 -10.909 29.250 10.704 1.00 8.58 ATOM 171 ND2 ASN 19 -10.656 27.267 9.679 1.00 8.58 ATOM 172 N TRP 20 -6.024 30.098 9.344 1.00 9.47 ATOM 173 CA TRP 20 -4.587 30.085 9.455 1.00 9.47 ATOM 174 C TRP 20 -4.070 31.444 9.834 1.00 9.47 ATOM 175 O TRP 20 -3.107 31.578 10.581 1.00 9.47 ATOM 177 CB TRP 20 -3.953 29.623 8.141 1.00 9.47 ATOM 180 CG TRP 20 -4.119 28.158 7.878 1.00 9.47 ATOM 181 CD1 TRP 20 -4.878 27.582 6.901 1.00 9.47 ATOM 183 NE1 TRP 20 -4.782 26.213 6.972 1.00 9.47 ATOM 184 CD2 TRP 20 -3.511 27.082 8.604 1.00 9.47 ATOM 185 CE2 TRP 20 -3.947 25.883 8.010 1.00 9.47 ATOM 186 CH2 TRP 20 -2.692 24.596 9.541 1.00 9.47 ATOM 187 CZ2 TRP 20 -3.543 24.631 8.472 1.00 9.47 ATOM 188 CE3 TRP 20 -2.642 27.015 9.696 1.00 9.47 ATOM 189 CZ3 TRP 20 -2.244 25.772 10.151 1.00 9.47 ATOM 190 N ALA 21 -4.673 32.481 9.244 1.00 8.66 ATOM 191 CA ALA 21 -4.447 33.879 9.398 1.00 8.66 ATOM 192 C ALA 21 -4.781 34.211 10.808 1.00 8.66 ATOM 193 O ALA 21 -4.098 35.005 11.448 1.00 8.66 ATOM 195 CB ALA 21 -5.284 34.664 8.400 1.00 8.66 ATOM 196 N SER 22 -5.858 33.594 11.327 1.00 8.41 ATOM 197 CA SER 22 -6.293 33.833 12.673 1.00 8.41 ATOM 198 C SER 22 -5.205 33.432 13.617 1.00 8.41 ATOM 199 O SER 22 -4.819 34.194 14.504 1.00 8.41 ATOM 201 CB SER 22 -7.585 33.067 12.963 1.00 8.41 ATOM 203 OG SER 22 -8.015 33.276 14.297 1.00 8.41 ATOM 204 N LEU 23 -4.662 32.217 13.432 1.00 8.19 ATOM 205 CA LEU 23 -3.696 31.705 14.359 1.00 8.19 ATOM 206 C LEU 23 -2.457 32.544 14.317 1.00 8.19 ATOM 207 O LEU 23 -1.838 32.804 15.348 1.00 8.19 ATOM 209 CB LEU 23 -3.371 30.244 14.042 1.00 8.19 ATOM 210 CG LEU 23 -4.494 29.232 14.283 1.00 8.19 ATOM 211 CD1 LEU 23 -4.100 27.857 13.766 1.00 8.19 ATOM 212 CD2 LEU 23 -4.845 29.162 15.761 1.00 8.19 ATOM 213 N ALA 24 -2.062 32.988 13.111 1.00 8.29 ATOM 214 CA ALA 24 -0.861 33.753 12.940 1.00 8.29 ATOM 215 C ALA 24 -0.983 35.046 13.681 1.00 8.29 ATOM 216 O ALA 24 -0.027 35.512 14.301 1.00 8.29 ATOM 218 CB ALA 24 -0.592 33.995 11.463 1.00 8.29 ATOM 219 N ALA 25 -2.180 35.653 13.634 1.00 8.37 ATOM 220 CA ALA 25 -2.387 36.943 14.225 1.00 8.37 ATOM 221 C ALA 25 -2.136 36.880 15.700 1.00 8.37 ATOM 222 O ALA 25 -1.490 37.766 16.260 1.00 8.37 ATOM 224 CB ALA 25 -3.797 37.437 13.941 1.00 8.37 ATOM 225 N ASN 26 -2.624 35.820 16.372 1.00 8.00 ATOM 226 CA ASN 26 -2.481 35.738 17.798 1.00 8.00 ATOM 227 C ASN 26 -1.032 35.617 18.152 1.00 8.00 ATOM 228 O ASN 26 -0.611 36.081 19.209 1.00 8.00 ATOM 230 CB ASN 26 -3.292 34.565 18.352 1.00 8.00 ATOM 231 CG ASN 26 -4.784 34.832 18.341 1.00 8.00 ATOM 232 OD1 ASN 26 -5.218 35.983 18.313 1.00 8.00 ATOM 235 ND2 ASN 26 -5.574 33.765 18.363 1.00 8.00 ATOM 236 N GLU 27 -0.236 34.963 17.284 1.00 8.47 ATOM 237 CA GLU 27 1.171 34.772 17.515 1.00 8.47 ATOM 238 C GLU 27 1.859 36.109 17.549 1.00 8.47 ATOM 239 O GLU 27 2.853 36.291 18.250 1.00 8.47 ATOM 241 CB GLU 27 1.774 33.871 16.435 1.00 8.47 ATOM 242 CD GLU 27 3.783 32.581 15.610 1.00 8.47 ATOM 243 CG GLU 27 3.245 33.549 16.645 1.00 8.47 ATOM 244 OE1 GLU 27 3.016 32.192 14.706 1.00 8.47 ATOM 245 OE2 GLU 27 4.973 32.213 15.703 1.00 8.47 ATOM 246 N LEU 28 1.316 37.082 16.798 1.00 8.19 ATOM 247 CA LEU 28 1.816 38.422 16.642 1.00 8.19 ATOM 248 C LEU 28 1.906 39.041 18.002 1.00 8.19 ATOM 249 O LEU 28 2.749 39.905 18.242 1.00 8.19 ATOM 251 CB LEU 28 0.909 39.227 15.710 1.00 8.19 ATOM 252 CG LEU 28 1.345 40.663 15.412 1.00 8.19 ATOM 253 CD1 LEU 28 2.711 40.682 14.745 1.00 8.19 ATOM 254 CD2 LEU 28 0.318 41.367 14.538 1.00 8.19 ATOM 255 N ARG 29 1.030 38.604 18.922 1.00 9.10 ATOM 256 CA ARG 29 0.967 39.107 20.270 1.00 9.10 ATOM 257 C ARG 29 2.315 38.907 20.891 1.00 9.10 ATOM 258 O ARG 29 2.742 39.678 21.750 1.00 9.10 ATOM 260 CB ARG 29 -0.135 38.395 21.057 1.00 9.10 ATOM 261 CD ARG 29 -2.587 37.992 21.416 1.00 9.10 ATOM 263 NE ARG 29 -2.568 36.559 21.130 1.00 9.10 ATOM 264 CG ARG 29 -1.544 38.746 20.606 1.00 9.10 ATOM 265 CZ ARG 29 -3.263 35.652 21.810 1.00 9.10 ATOM 268 NH1 ARG 29 -3.184 34.371 21.480 1.00 9.10 ATOM 271 NH2 ARG 29 -4.035 36.031 22.820 1.00 9.10 ATOM 272 N VAL 30 3.015 37.844 20.468 1.00 10.12 ATOM 273 CA VAL 30 4.314 37.462 20.947 1.00 10.12 ATOM 274 C VAL 30 5.283 38.569 20.610 1.00 10.12 ATOM 275 O VAL 30 6.397 38.597 21.122 1.00 10.12 ATOM 277 CB VAL 30 4.765 36.118 20.346 1.00 10.12 ATOM 278 CG1 VAL 30 6.213 35.829 20.713 1.00 10.12 ATOM 279 CG2 VAL 30 3.858 34.992 20.817 1.00 10.12 ATOM 280 N THR 31 4.866 39.494 19.718 1.00 9.78 ATOM 281 CA THR 31 5.572 40.639 19.183 1.00 9.78 ATOM 282 C THR 31 6.483 40.216 18.075 1.00 9.78 ATOM 283 O THR 31 7.356 40.973 17.651 1.00 9.78 ATOM 285 CB THR 31 6.380 41.365 20.275 1.00 9.78 ATOM 287 OG1 THR 31 7.562 40.613 20.578 1.00 9.78 ATOM 288 CG2 THR 31 5.554 41.504 21.545 1.00 9.78 ATOM 289 N GLU 32 6.279 38.990 17.560 1.00 9.41 ATOM 290 CA GLU 32 6.966 38.570 16.376 1.00 9.41 ATOM 291 C GLU 32 5.973 38.753 15.268 1.00 9.41 ATOM 292 O GLU 32 5.112 37.904 15.048 1.00 9.41 ATOM 294 CB GLU 32 7.452 37.127 16.522 1.00 9.41 ATOM 295 CD GLU 32 8.961 35.491 17.719 1.00 9.41 ATOM 296 CG GLU 32 8.503 36.932 17.603 1.00 9.41 ATOM 297 OE1 GLU 32 8.341 34.618 17.075 1.00 9.41 ATOM 298 OE2 GLU 32 9.938 35.235 18.453 1.00 9.41 ATOM 299 N ARG 33 6.073 39.879 14.531 1.00 8.78 ATOM 300 CA ARG 33 5.105 40.200 13.518 1.00 8.78 ATOM 301 C ARG 33 5.369 39.407 12.276 1.00 8.78 ATOM 302 O ARG 33 6.514 39.259 11.853 1.00 8.78 ATOM 304 CB ARG 33 5.128 41.698 13.210 1.00 8.78 ATOM 305 CD ARG 33 4.117 43.647 11.993 1.00 8.78 ATOM 307 NE ARG 33 3.787 44.400 13.200 1.00 8.78 ATOM 308 CG ARG 33 4.059 42.145 12.226 1.00 8.78 ATOM 309 CZ ARG 33 2.547 44.640 13.616 1.00 8.78 ATOM 312 NH1 ARG 33 2.343 45.335 14.727 1.00 8.78 ATOM 315 NH2 ARG 33 1.515 44.183 12.920 1.00 8.78 ATOM 316 N PRO 34 4.333 38.849 11.698 1.00 8.14 ATOM 317 CA PRO 34 4.531 38.159 10.449 1.00 8.14 ATOM 318 C PRO 34 4.662 39.101 9.295 1.00 8.14 ATOM 319 O PRO 34 3.824 39.991 9.150 1.00 8.14 ATOM 320 CB PRO 34 3.281 37.287 10.306 1.00 8.14 ATOM 321 CD PRO 34 3.058 38.455 12.383 1.00 8.14 ATOM 322 CG PRO 34 2.759 37.152 11.696 1.00 8.14 ATOM 323 N PHE 35 5.679 38.888 8.439 1.00 8.66 ATOM 324 CA PHE 35 5.902 39.682 7.266 1.00 8.66 ATOM 325 C PHE 35 4.784 39.449 6.300 1.00 8.66 ATOM 326 O PHE 35 4.313 40.396 5.672 1.00 8.66 ATOM 328 CB PHE 35 7.256 39.344 6.639 1.00 8.66 ATOM 329 CG PHE 35 8.431 39.871 7.412 1.00 8.66 ATOM 330 CZ PHE 35 10.606 40.853 8.837 1.00 8.66 ATOM 331 CD1 PHE 35 8.873 39.226 8.553 1.00 8.66 ATOM 332 CE1 PHE 35 9.954 39.711 9.264 1.00 8.66 ATOM 333 CD2 PHE 35 9.093 41.013 6.998 1.00 8.66 ATOM 334 CE2 PHE 35 10.175 41.498 7.708 1.00 8.66 ATOM 335 N TRP 36 4.343 38.180 6.123 1.00 9.12 ATOM 336 CA TRP 36 3.310 37.971 5.145 1.00 9.12 ATOM 337 C TRP 36 2.066 38.675 5.574 1.00 9.12 ATOM 338 O TRP 36 1.326 39.208 4.749 1.00 9.12 ATOM 340 CB TRP 36 3.052 36.475 4.949 1.00 9.12 ATOM 343 CG TRP 36 4.133 35.776 4.185 1.00 9.12 ATOM 344 CD1 TRP 36 3.984 35.027 3.053 1.00 9.12 ATOM 346 NE1 TRP 36 5.202 34.544 2.639 1.00 9.12 ATOM 347 CD2 TRP 36 5.531 35.757 4.497 1.00 9.12 ATOM 348 CE2 TRP 36 6.168 34.980 3.512 1.00 9.12 ATOM 349 CH2 TRP 36 8.277 35.317 4.518 1.00 9.12 ATOM 350 CZ2 TRP 36 7.543 34.753 3.513 1.00 9.12 ATOM 351 CE3 TRP 36 6.307 36.323 5.514 1.00 9.12 ATOM 352 CZ3 TRP 36 7.669 36.095 5.511 1.00 9.12 ATOM 353 N ILE 37 1.783 38.678 6.886 1.00 8.64 ATOM 354 CA ILE 37 0.622 39.386 7.329 1.00 8.64 ATOM 355 C ILE 37 0.789 40.822 6.941 1.00 8.64 ATOM 356 O ILE 37 -0.159 41.457 6.486 1.00 8.64 ATOM 358 CB ILE 37 0.409 39.227 8.846 1.00 8.64 ATOM 359 CD1 ILE 37 0.076 37.469 10.662 1.00 8.64 ATOM 360 CG1 ILE 37 0.029 37.784 9.183 1.00 8.64 ATOM 361 CG2 ILE 37 -0.632 40.218 9.344 1.00 8.64 ATOM 362 N SER 38 2.012 41.363 7.096 1.00 8.98 ATOM 363 CA SER 38 2.305 42.736 6.794 1.00 8.98 ATOM 364 C SER 38 2.005 43.001 5.353 1.00 8.98 ATOM 365 O SER 38 1.487 44.061 5.016 1.00 8.98 ATOM 367 CB SER 38 3.765 43.056 7.119 1.00 8.98 ATOM 369 OG SER 38 4.009 42.970 8.513 1.00 8.98 ATOM 370 N SER 39 2.344 42.066 4.451 1.00 8.11 ATOM 371 CA SER 39 2.066 42.277 3.058 1.00 8.11 ATOM 372 C SER 39 0.581 42.264 2.845 1.00 8.11 ATOM 373 O SER 39 0.050 43.055 2.067 1.00 8.11 ATOM 375 CB SER 39 2.755 41.208 2.207 1.00 8.11 ATOM 377 OG SER 39 2.223 39.922 2.473 1.00 8.11 ATOM 378 N PHE 40 -0.130 41.361 3.549 1.00 8.40 ATOM 379 CA PHE 40 -1.553 41.230 3.411 1.00 8.40 ATOM 380 C PHE 40 -2.179 42.536 3.773 1.00 8.40 ATOM 381 O PHE 40 -3.027 43.049 3.044 1.00 8.40 ATOM 383 CB PHE 40 -2.074 40.092 4.291 1.00 8.40 ATOM 384 CG PHE 40 -3.566 39.925 4.247 1.00 8.40 ATOM 385 CZ PHE 40 -6.328 39.621 4.172 1.00 8.40 ATOM 386 CD1 PHE 40 -4.173 39.275 3.187 1.00 8.40 ATOM 387 CE1 PHE 40 -5.546 39.122 3.147 1.00 8.40 ATOM 388 CD2 PHE 40 -4.362 40.419 5.265 1.00 8.40 ATOM 389 CE2 PHE 40 -5.735 40.265 5.225 1.00 8.40 ATOM 390 N ILE 41 -1.764 43.086 4.931 1.00 8.64 ATOM 391 CA ILE 41 -2.238 44.314 5.507 1.00 8.64 ATOM 392 C ILE 41 -1.773 45.492 4.706 1.00 8.64 ATOM 393 O ILE 41 -2.486 46.481 4.569 1.00 8.64 ATOM 395 CB ILE 41 -1.787 44.461 6.972 1.00 8.64 ATOM 396 CD1 ILE 41 -1.889 43.307 9.243 1.00 8.64 ATOM 397 CG1 ILE 41 -2.469 43.408 7.848 1.00 8.64 ATOM 398 CG2 ILE 41 -2.053 45.873 7.472 1.00 8.64 ATOM 399 N GLY 42 -0.542 45.439 4.168 1.00 10.15 ATOM 400 CA GLY 42 -0.013 46.549 3.428 1.00 10.15 ATOM 401 C GLY 42 0.839 47.380 4.341 1.00 10.15 ATOM 402 O GLY 42 1.218 48.499 3.997 1.00 10.15 ATOM 404 N ARG 43 1.164 46.851 5.539 1.00 7.70 ATOM 405 CA ARG 43 1.993 47.573 6.464 1.00 7.70 ATOM 406 C ARG 43 3.424 47.469 6.033 1.00 7.70 ATOM 407 O ARG 43 3.795 46.591 5.255 1.00 7.70 ATOM 409 CB ARG 43 1.806 47.033 7.883 1.00 7.70 ATOM 410 CD ARG 43 0.309 46.724 9.874 1.00 7.70 ATOM 412 NE ARG 43 -1.029 46.911 10.430 1.00 7.70 ATOM 413 CG ARG 43 0.419 47.268 8.459 1.00 7.70 ATOM 414 CZ ARG 43 -1.394 46.518 11.647 1.00 7.70 ATOM 417 NH1 ARG 43 -2.634 46.730 12.067 1.00 7.70 ATOM 420 NH2 ARG 43 -0.519 45.914 12.439 1.00 7.70 ATOM 421 N SER 44 4.274 48.395 6.520 1.00 8.60 ATOM 422 CA SER 44 5.648 48.410 6.107 1.00 8.60 ATOM 423 C SER 44 6.357 47.206 6.641 1.00 8.60 ATOM 424 O SER 44 5.989 46.643 7.671 1.00 8.60 ATOM 426 CB SER 44 6.334 49.693 6.578 1.00 8.60 ATOM 428 OG SER 44 6.431 49.732 7.991 1.00 8.60 ATOM 429 N LYS 45 7.401 46.761 5.915 1.00 8.98 ATOM 430 CA LYS 45 8.188 45.643 6.349 1.00 8.98 ATOM 431 C LYS 45 9.477 46.183 6.888 1.00 8.98 ATOM 432 O LYS 45 9.959 47.219 6.434 1.00 8.98 ATOM 434 CB LYS 45 8.415 44.665 5.194 1.00 8.98 ATOM 435 CD LYS 45 7.447 43.020 3.565 1.00 8.98 ATOM 436 CE LYS 45 6.176 42.366 3.046 1.00 8.98 ATOM 437 CG LYS 45 7.145 44.008 4.680 1.00 8.98 ATOM 441 NZ LYS 45 6.452 41.436 1.916 1.00 8.98 TER END