####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS246_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS246_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 7 - 26 4.99 21.18 LCS_AVERAGE: 41.79 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 19 - 28 1.87 17.48 LCS_AVERAGE: 16.43 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 20 - 28 0.29 19.29 LCS_AVERAGE: 12.45 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 3 16 3 3 4 4 4 5 5 6 10 12 13 16 18 20 21 25 27 30 31 32 LCS_GDT V 3 V 3 3 5 16 3 3 3 4 4 6 7 10 10 12 13 15 15 16 21 25 27 30 31 32 LCS_GDT Q 4 Q 4 4 5 16 3 4 4 4 4 6 7 8 10 10 12 15 15 17 21 25 27 30 31 32 LCS_GDT G 5 G 5 4 5 19 3 4 4 4 4 6 7 10 10 12 13 15 17 17 21 25 27 30 31 32 LCS_GDT P 6 P 6 4 5 19 3 4 4 4 5 6 9 10 11 12 13 16 17 21 21 24 27 30 31 32 LCS_GDT W 7 W 7 4 5 20 0 4 4 4 5 6 9 10 11 14 14 16 18 21 21 25 27 30 31 32 LCS_GDT V 8 V 8 4 5 20 1 3 4 4 5 6 9 10 11 14 14 16 18 21 21 24 27 30 31 32 LCS_GDT G 9 G 9 4 5 20 0 4 4 4 5 5 8 10 11 14 14 16 18 21 21 23 27 30 31 32 LCS_GDT S 10 S 10 4 5 20 0 4 4 4 5 6 8 10 10 13 14 15 17 21 21 25 27 30 31 32 LCS_GDT S 11 S 11 7 7 20 4 6 7 7 7 7 8 10 11 14 14 16 18 21 21 23 25 30 31 32 LCS_GDT Y 12 Y 12 7 7 20 4 6 7 7 7 7 7 10 10 14 14 16 17 21 21 25 27 30 31 32 LCS_GDT V 13 V 13 7 7 20 4 6 7 7 7 7 9 10 11 14 15 16 18 21 21 25 27 30 31 32 LCS_GDT A 14 A 14 7 7 20 4 6 7 7 7 7 9 10 11 14 15 16 18 21 21 23 27 30 31 32 LCS_GDT E 15 E 15 7 7 20 4 6 7 7 7 7 9 10 11 14 14 16 18 21 21 25 27 30 31 32 LCS_GDT T 16 T 16 7 7 20 4 6 7 7 7 7 7 8 10 12 15 16 18 21 21 25 27 30 31 32 LCS_GDT G 17 G 17 7 7 20 3 5 7 7 7 7 8 10 11 14 15 16 18 21 21 23 27 30 31 32 LCS_GDT Q 18 Q 18 4 4 20 3 3 4 4 5 6 9 10 11 14 15 16 18 21 21 25 27 30 31 32 LCS_GDT N 19 N 19 4 10 20 3 3 5 6 7 9 10 11 13 14 15 16 18 21 21 25 27 30 31 32 LCS_GDT W 20 W 20 9 10 20 9 9 9 9 9 9 10 11 13 14 15 16 18 21 21 25 27 30 31 32 LCS_GDT A 21 A 21 9 10 20 9 9 9 9 9 9 10 11 13 14 15 16 18 21 21 25 27 30 31 32 LCS_GDT S 22 S 22 9 10 20 9 9 9 9 9 9 10 11 13 14 15 16 18 21 21 25 27 30 31 32 LCS_GDT L 23 L 23 9 10 20 9 9 9 9 9 9 10 11 13 14 15 16 18 21 21 25 27 30 31 32 LCS_GDT A 24 A 24 9 10 20 9 9 9 9 9 9 10 11 13 14 15 16 18 21 21 25 27 30 31 32 LCS_GDT A 25 A 25 9 10 20 9 9 9 9 9 9 10 11 13 14 15 16 18 21 21 25 27 30 31 32 LCS_GDT N 26 N 26 9 10 20 9 9 9 9 9 9 10 11 13 14 15 16 18 21 21 25 27 30 31 32 LCS_GDT E 27 E 27 9 10 17 9 9 9 9 9 9 10 11 13 14 15 16 18 20 21 25 27 30 31 32 LCS_GDT L 28 L 28 9 10 17 9 9 9 9 9 9 9 11 13 14 15 15 16 16 19 21 27 30 31 32 LCS_GDT R 29 R 29 5 6 17 3 3 5 6 7 7 10 11 13 14 15 16 18 20 21 25 27 30 31 32 LCS_GDT V 30 V 30 5 6 17 3 4 5 6 7 7 9 10 13 14 15 16 18 20 21 25 27 30 31 32 LCS_GDT T 31 T 31 5 6 17 3 4 5 6 7 10 11 13 14 14 15 16 18 20 21 25 27 30 31 32 LCS_GDT E 32 E 32 5 6 17 3 4 5 7 9 10 12 13 14 14 15 16 18 20 21 25 27 30 31 32 LCS_GDT R 33 R 33 5 8 17 3 4 5 6 6 9 12 13 14 14 15 16 18 20 21 25 27 30 31 32 LCS_GDT P 34 P 34 3 8 17 3 3 4 7 10 10 12 13 14 14 14 14 15 16 19 21 22 24 27 31 LCS_GDT F 35 F 35 3 8 17 3 3 4 7 10 10 12 13 14 14 14 14 15 15 15 17 20 22 26 28 LCS_GDT W 36 W 36 4 8 17 4 4 4 7 10 10 12 13 14 14 14 14 15 15 16 18 21 23 26 28 LCS_GDT I 37 I 37 5 8 17 4 4 5 7 10 10 12 13 14 14 14 14 15 15 15 17 19 21 23 27 LCS_GDT S 38 S 38 5 8 17 4 4 5 7 10 10 12 13 14 14 14 14 15 15 15 17 19 21 25 28 LCS_GDT S 39 S 39 5 8 17 4 4 5 7 10 10 12 13 14 14 14 14 15 15 15 17 20 23 26 28 LCS_GDT F 40 F 40 5 8 17 3 4 5 7 10 10 12 13 14 14 14 14 15 15 15 17 20 23 26 28 LCS_GDT I 41 I 41 5 8 17 3 4 5 7 10 10 12 13 14 14 14 14 15 15 15 17 20 23 26 28 LCS_GDT G 42 G 42 3 8 17 0 3 3 4 6 10 11 12 14 14 14 14 15 15 15 17 20 23 26 28 LCS_GDT R 43 R 43 3 8 17 0 4 5 7 10 10 12 13 14 14 14 14 15 15 15 17 20 23 26 28 LCS_GDT S 44 S 44 3 5 17 0 3 5 6 10 10 12 13 14 14 14 14 15 15 15 16 20 20 21 23 LCS_GDT K 45 K 45 0 5 17 0 0 4 5 6 7 8 8 10 11 13 14 15 15 15 15 16 16 17 19 LCS_AVERAGE LCS_A: 23.55 ( 12.45 16.43 41.79 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 9 9 9 10 10 12 13 14 14 15 16 18 21 21 25 27 30 31 32 GDT PERCENT_AT 20.45 20.45 20.45 20.45 22.73 22.73 27.27 29.55 31.82 31.82 34.09 36.36 40.91 47.73 47.73 56.82 61.36 68.18 70.45 72.73 GDT RMS_LOCAL 0.29 0.29 0.29 0.29 1.96 1.96 2.37 2.65 2.80 2.80 3.82 4.21 4.84 5.11 5.11 6.45 6.74 7.00 7.10 7.21 GDT RMS_ALL_AT 19.29 19.29 19.29 19.29 21.65 21.65 23.14 23.52 23.40 23.40 15.65 22.23 21.07 20.90 20.90 14.11 15.16 14.40 14.71 14.73 # Checking swapping # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 31.848 0 0.587 0.575 35.456 0.000 0.000 - LGA V 3 V 3 34.275 0 0.646 0.683 36.852 0.000 0.000 34.819 LGA Q 4 Q 4 40.777 0 0.617 0.577 44.222 0.000 0.000 40.963 LGA G 5 G 5 44.667 0 0.093 0.093 46.677 0.000 0.000 - LGA P 6 P 6 47.677 0 0.690 0.669 50.914 0.000 0.000 50.838 LGA W 7 W 7 44.353 0 0.354 1.217 45.844 0.000 0.000 44.122 LGA V 8 V 8 40.623 0 0.186 0.207 41.743 0.000 0.000 38.279 LGA G 9 G 9 38.896 0 0.532 0.532 39.679 0.000 0.000 - LGA S 10 S 10 37.216 0 0.628 0.597 40.219 0.000 0.000 40.219 LGA S 11 S 11 33.031 0 0.423 0.623 34.998 0.000 0.000 32.448 LGA Y 12 Y 12 30.425 0 0.091 1.468 38.331 0.000 0.000 38.331 LGA V 13 V 13 26.658 0 0.089 0.112 28.576 0.000 0.000 25.434 LGA A 14 A 14 25.143 0 0.069 0.065 26.444 0.000 0.000 - LGA E 15 E 15 26.481 0 0.044 0.271 29.669 0.000 0.000 29.147 LGA T 16 T 16 22.960 0 0.132 1.151 25.524 0.000 0.000 25.524 LGA G 17 G 17 20.077 0 0.201 0.201 21.356 0.000 0.000 - LGA Q 18 Q 18 20.845 0 0.606 0.888 23.111 0.000 0.000 20.168 LGA N 19 N 19 26.262 0 0.061 1.082 30.886 0.000 0.000 28.940 LGA W 20 W 20 22.340 0 0.618 0.933 30.763 0.000 0.000 30.763 LGA A 21 A 21 19.483 0 0.088 0.082 20.768 0.000 0.000 - LGA S 22 S 22 18.319 0 0.069 0.103 20.016 0.000 0.000 20.016 LGA L 23 L 23 18.184 0 0.031 1.449 21.334 0.000 0.000 21.334 LGA A 24 A 24 17.551 0 0.019 0.023 17.871 0.000 0.000 - LGA A 25 A 25 16.509 0 0.065 0.072 17.300 0.000 0.000 - LGA N 26 N 26 17.245 0 0.051 0.337 18.822 0.000 0.000 17.461 LGA E 27 E 27 19.418 0 0.154 0.976 23.208 0.000 0.000 21.093 LGA L 28 L 28 18.772 0 0.587 0.522 23.190 0.000 0.000 22.914 LGA R 29 R 29 12.541 0 0.551 1.502 19.763 0.000 0.000 18.899 LGA V 30 V 30 9.314 0 0.280 0.327 12.904 0.000 0.000 9.263 LGA T 31 T 31 4.303 0 0.560 0.928 7.814 10.455 5.974 7.814 LGA E 32 E 32 2.139 0 0.057 0.752 7.425 40.000 19.798 7.425 LGA R 33 R 33 3.614 0 0.353 1.363 6.136 15.909 8.760 3.747 LGA P 34 P 34 3.510 0 0.573 0.578 6.435 17.727 10.130 6.435 LGA F 35 F 35 3.186 0 0.626 1.278 11.977 19.545 7.603 11.977 LGA W 36 W 36 2.463 0 0.347 0.326 11.811 62.727 18.312 11.811 LGA I 37 I 37 0.980 0 0.102 1.004 4.257 81.818 61.364 4.257 LGA S 38 S 38 0.638 0 0.053 0.071 0.983 86.364 84.848 0.983 LGA S 39 S 39 0.508 0 0.110 0.671 3.234 78.182 68.788 3.234 LGA F 40 F 40 2.099 0 0.073 1.093 3.075 40.000 40.331 3.075 LGA I 41 I 41 2.965 0 0.579 0.514 4.141 22.273 19.318 3.437 LGA G 42 G 42 4.407 0 0.725 0.725 4.407 19.545 19.545 - LGA R 43 R 43 2.138 0 0.313 1.141 8.865 31.364 14.711 8.865 LGA S 44 S 44 2.714 0 0.627 0.831 5.539 16.818 14.848 3.952 LGA K 45 K 45 8.872 0 0.140 0.830 20.149 0.000 0.000 20.149 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 12.136 12.000 12.999 12.335 8.962 4.675 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 13 2.65 31.818 26.505 0.472 LGA_LOCAL RMSD: 2.652 Number of atoms: 13 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 23.518 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 12.136 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.385258 * X + 0.864850 * Y + -0.321886 * Z + -44.244499 Y_new = 0.641649 * X + -0.501744 * Y + -0.580120 * Z + 66.698227 Z_new = -0.663221 * X + 0.016957 * Y + -0.748231 * Z + 72.572365 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.030070 0.725115 3.118933 [DEG: 59.0186 41.5460 178.7017 ] ZXZ: -0.506568 2.416188 -1.545233 [DEG: -29.0242 138.4374 -88.5354 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS246_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS246_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 13 2.65 26.505 12.14 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS246_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 11 N ALA 2 -2.553 40.414 41.890 1.00 11.89 ATOM 12 CA ALA 2 -3.316 39.232 41.931 1.00 11.89 ATOM 13 C ALA 2 -2.557 38.334 42.937 1.00 11.89 ATOM 14 O ALA 2 -3.181 37.689 43.777 1.00 11.89 ATOM 15 CB ALA 2 -3.435 38.529 40.584 1.00 11.89 ATOM 17 N VAL 3 -1.232 38.268 42.895 1.00 10.78 ATOM 18 CA VAL 3 -0.364 37.458 43.605 1.00 10.78 ATOM 19 C VAL 3 -0.047 37.825 44.974 1.00 10.78 ATOM 20 O VAL 3 0.625 37.072 45.676 1.00 10.78 ATOM 21 CB VAL 3 0.932 37.351 42.771 1.00 10.78 ATOM 22 CG1 VAL 3 2.035 36.669 43.578 1.00 10.78 ATOM 23 CG2 VAL 3 0.682 36.533 41.504 1.00 10.78 ATOM 25 N GLN 4 -0.549 39.011 45.360 1.00 9.95 ATOM 26 CA GLN 4 -0.521 39.559 46.687 1.00 9.95 ATOM 27 C GLN 4 -1.794 39.393 47.420 1.00 9.95 ATOM 28 O GLN 4 -2.001 40.032 48.448 1.00 9.95 ATOM 29 CB GLN 4 -0.151 41.044 46.607 1.00 9.95 ATOM 30 CG GLN 4 1.274 41.240 46.090 1.00 9.95 ATOM 31 CD GLN 4 1.664 42.714 46.104 1.00 9.95 ATOM 32 NE2 GLN 4 2.783 43.049 46.710 1.00 9.95 ATOM 33 OE1 GLN 4 0.957 43.557 45.569 1.00 9.95 ATOM 35 N GLY 5 -2.584 38.548 46.874 1.00 9.89 ATOM 36 CA GLY 5 -3.987 38.644 46.586 1.00 9.89 ATOM 37 C GLY 5 -4.554 37.331 46.920 1.00 9.89 ATOM 38 O GLY 5 -3.858 36.480 47.470 1.00 9.89 ATOM 39 N PRO 6 -5.820 37.216 46.557 1.00 10.25 ATOM 40 CA PRO 6 -6.384 35.868 46.324 1.00 10.25 ATOM 41 C PRO 6 -5.748 35.220 45.173 1.00 10.25 ATOM 42 O PRO 6 -5.426 35.886 44.192 1.00 10.25 ATOM 43 CB PRO 6 -7.869 36.125 46.064 1.00 10.25 ATOM 44 CG PRO 6 -8.200 37.387 46.828 1.00 10.25 ATOM 45 CD PRO 6 -7.529 37.255 48.185 1.00 10.25 ATOM 47 N TRP 7 -5.593 33.893 45.350 1.00 10.34 ATOM 48 CA TRP 7 -5.066 33.028 44.373 1.00 10.34 ATOM 49 C TRP 7 -5.846 31.817 44.333 1.00 10.34 ATOM 50 O TRP 7 -6.098 31.212 45.373 1.00 10.34 ATOM 51 CB TRP 7 -3.598 32.697 44.658 1.00 10.34 ATOM 52 CG TRP 7 -2.980 31.886 43.553 1.00 10.34 ATOM 53 CD1 TRP 7 -2.930 30.532 43.492 1.00 10.34 ATOM 54 CD2 TRP 7 -2.334 32.370 42.365 1.00 10.34 ATOM 55 NE1 TRP 7 -2.289 30.151 42.335 1.00 10.34 ATOM 56 CE2 TRP 7 -1.907 31.259 41.614 1.00 10.34 ATOM 57 CE3 TRP 7 -2.080 33.656 41.872 1.00 10.34 ATOM 58 CZ2 TRP 7 -1.241 31.405 40.400 1.00 10.34 ATOM 59 CZ3 TRP 7 -1.414 33.802 40.656 1.00 10.34 ATOM 60 CH2 TRP 7 -0.997 32.686 39.925 1.00 10.34 ATOM 62 N VAL 8 -6.316 31.323 43.091 1.00 9.78 ATOM 63 CA VAL 8 -7.355 30.420 42.954 1.00 9.78 ATOM 64 C VAL 8 -7.005 28.884 43.021 1.00 9.78 ATOM 65 O VAL 8 -7.359 28.213 43.988 1.00 9.78 ATOM 66 CB VAL 8 -8.065 30.744 41.621 1.00 9.78 ATOM 67 CG1 VAL 8 -9.162 29.718 41.335 1.00 9.78 ATOM 68 CG2 VAL 8 -8.702 32.131 41.681 1.00 9.78 ATOM 70 N GLY 9 -6.353 28.308 42.099 1.00 9.63 ATOM 71 CA GLY 9 -6.879 27.074 41.685 1.00 9.63 ATOM 72 C GLY 9 -5.886 26.381 40.849 1.00 9.63 ATOM 73 O GLY 9 -4.981 27.016 40.314 1.00 9.63 ATOM 75 N SER 10 -6.061 25.064 40.731 1.00 9.30 ATOM 76 CA SER 10 -5.139 24.094 40.363 1.00 9.30 ATOM 77 C SER 10 -4.909 23.919 38.951 1.00 9.30 ATOM 78 O SER 10 -5.625 24.496 38.135 1.00 9.30 ATOM 79 CB SER 10 -5.597 22.773 40.982 1.00 9.30 ATOM 80 OG SER 10 -6.802 22.339 40.369 1.00 9.30 ATOM 82 N SER 11 -3.941 23.138 38.587 1.00 9.01 ATOM 83 CA SER 11 -3.154 23.122 37.428 1.00 9.01 ATOM 84 C SER 11 -2.404 24.523 37.192 1.00 9.01 ATOM 85 O SER 11 -2.350 25.012 36.066 1.00 9.01 ATOM 86 CB SER 11 -4.022 22.787 36.214 1.00 9.01 ATOM 87 OG SER 11 -4.820 23.907 35.862 1.00 9.01 ATOM 89 N TYR 12 -1.801 25.200 38.246 1.00 8.63 ATOM 90 CA TYR 12 -2.235 26.526 38.744 1.00 8.63 ATOM 91 C TYR 12 -2.163 27.518 37.722 1.00 8.63 ATOM 92 O TYR 12 -3.107 28.281 37.535 1.00 8.63 ATOM 93 CB TYR 12 -1.377 26.946 39.941 1.00 8.63 ATOM 94 CG TYR 12 -1.668 26.117 41.175 1.00 8.63 ATOM 95 CD1 TYR 12 -1.140 24.832 41.305 1.00 8.63 ATOM 96 CD2 TYR 12 -2.470 26.631 42.194 1.00 8.63 ATOM 97 CE1 TYR 12 -1.410 24.068 42.442 1.00 8.63 ATOM 98 CE2 TYR 12 -2.742 25.870 43.333 1.00 8.63 ATOM 99 CZ TYR 12 -2.211 24.591 43.453 1.00 8.63 ATOM 100 OH TYR 12 -2.476 23.841 44.573 1.00 8.63 ATOM 102 N VAL 13 -1.055 27.637 36.930 1.00 8.47 ATOM 103 CA VAL 13 -1.143 28.516 35.866 1.00 8.47 ATOM 104 C VAL 13 -2.199 28.222 34.803 1.00 8.47 ATOM 105 O VAL 13 -2.801 29.146 34.261 1.00 8.47 ATOM 106 CB VAL 13 0.257 28.593 35.216 1.00 8.47 ATOM 107 CG1 VAL 13 0.212 29.443 33.947 1.00 8.47 ATOM 108 CG2 VAL 13 1.259 29.223 36.184 1.00 8.47 ATOM 110 N ALA 14 -2.494 26.891 34.441 1.00 8.46 ATOM 111 CA ALA 14 -3.524 26.494 33.502 1.00 8.46 ATOM 112 C ALA 14 -4.766 26.963 34.022 1.00 8.46 ATOM 113 O ALA 14 -5.579 27.506 33.277 1.00 8.46 ATOM 114 CB ALA 14 -3.572 24.983 33.304 1.00 8.46 ATOM 116 N GLU 15 -4.972 26.771 35.392 1.00 8.46 ATOM 117 CA GLU 15 -6.280 27.304 35.951 1.00 8.46 ATOM 118 C GLU 15 -6.455 28.816 35.787 1.00 8.46 ATOM 119 O GLU 15 -7.524 29.273 35.390 1.00 8.46 ATOM 120 CB GLU 15 -6.376 26.922 37.431 1.00 8.46 ATOM 121 CG GLU 15 -7.749 27.266 38.010 1.00 8.46 ATOM 122 CD GLU 15 -8.841 26.420 37.366 1.00 8.46 ATOM 123 OE1 GLU 15 -8.502 25.544 36.565 1.00 8.46 ATOM 124 OE2 GLU 15 -10.014 26.654 37.681 1.00 8.46 ATOM 126 N THR 16 -5.434 29.485 36.083 1.00 8.29 ATOM 127 CA THR 16 -5.511 30.955 35.964 1.00 8.29 ATOM 128 C THR 16 -5.615 31.394 34.510 1.00 8.29 ATOM 129 O THR 16 -6.371 32.311 34.195 1.00 8.29 ATOM 130 CB THR 16 -4.282 31.616 36.618 1.00 8.29 ATOM 131 OG1 THR 16 -4.245 31.268 37.995 1.00 8.29 ATOM 132 CG2 THR 16 -4.339 33.137 36.497 1.00 8.29 ATOM 134 N GLY 17 -4.900 30.770 33.657 1.00 8.15 ATOM 135 CA GLY 17 -4.924 31.064 32.251 1.00 8.15 ATOM 136 C GLY 17 -6.346 30.741 31.708 1.00 8.15 ATOM 137 O GLY 17 -6.827 31.418 30.801 1.00 8.15 ATOM 139 N GLN 18 -6.951 29.659 32.357 1.00 8.29 ATOM 140 CA GLN 18 -8.440 29.401 32.106 1.00 8.29 ATOM 141 C GLN 18 -9.342 30.509 32.290 1.00 8.29 ATOM 142 O GLN 18 -10.173 30.778 31.425 1.00 8.29 ATOM 143 CB GLN 18 -8.850 28.235 33.009 1.00 8.29 ATOM 144 CG GLN 18 -8.219 26.919 32.548 1.00 8.29 ATOM 145 CD GLN 18 -8.700 25.752 33.403 1.00 8.29 ATOM 146 NE2 GLN 18 -7.812 24.854 33.771 1.00 8.29 ATOM 147 OE1 GLN 18 -9.873 25.656 33.734 1.00 8.29 ATOM 149 N ASN 19 -9.184 31.189 33.450 1.00 8.13 ATOM 150 CA ASN 19 -9.947 32.395 33.814 1.00 8.13 ATOM 151 C ASN 19 -9.654 33.522 32.783 1.00 8.13 ATOM 152 O ASN 19 -10.571 34.217 32.351 1.00 8.13 ATOM 153 CB ASN 19 -9.603 32.871 35.229 1.00 8.13 ATOM 154 CG ASN 19 -9.952 31.812 36.269 1.00 8.13 ATOM 155 ND2 ASN 19 -9.005 31.438 37.104 1.00 8.13 ATOM 156 OD1 ASN 19 -11.074 31.329 36.324 1.00 8.13 ATOM 158 N TRP 20 -8.356 33.658 32.415 1.00 8.17 ATOM 159 CA TRP 20 -8.102 34.707 31.386 1.00 8.17 ATOM 160 C TRP 20 -8.821 34.417 30.031 1.00 8.17 ATOM 161 O TRP 20 -9.420 35.316 29.447 1.00 8.17 ATOM 162 CB TRP 20 -6.594 34.844 31.159 1.00 8.17 ATOM 163 CG TRP 20 -5.971 35.840 32.097 1.00 8.17 ATOM 164 CD1 TRP 20 -5.027 36.757 31.773 1.00 8.17 ATOM 165 CD2 TRP 20 -6.247 36.018 33.496 1.00 8.17 ATOM 166 NE1 TRP 20 -4.702 37.492 32.890 1.00 8.17 ATOM 167 CE2 TRP 20 -5.436 37.064 33.974 1.00 8.17 ATOM 168 CE3 TRP 20 -7.116 35.378 34.388 1.00 8.17 ATOM 169 CZ2 TRP 20 -5.473 37.477 35.303 1.00 8.17 ATOM 170 CZ3 TRP 20 -7.154 35.789 35.719 1.00 8.17 ATOM 171 CH2 TRP 20 -6.340 36.831 36.174 1.00 8.17 ATOM 173 N ALA 21 -8.730 33.213 29.628 1.00 8.15 ATOM 174 CA ALA 21 -9.251 32.865 28.311 1.00 8.15 ATOM 175 C ALA 21 -10.717 33.040 28.316 1.00 8.15 ATOM 176 O ALA 21 -11.266 33.659 27.406 1.00 8.15 ATOM 177 CB ALA 21 -8.894 31.432 27.936 1.00 8.15 ATOM 179 N SER 22 -11.387 32.474 29.398 1.00 8.20 ATOM 180 CA SER 22 -12.761 32.317 29.273 1.00 8.20 ATOM 181 C SER 22 -13.284 33.789 29.358 1.00 8.20 ATOM 182 O SER 22 -14.211 34.155 28.639 1.00 8.20 ATOM 183 CB SER 22 -13.409 31.471 30.371 1.00 8.20 ATOM 184 OG SER 22 -13.250 32.105 31.631 1.00 8.20 ATOM 186 N LEU 23 -12.571 34.563 30.311 1.00 8.36 ATOM 187 CA LEU 23 -13.085 35.985 30.491 1.00 8.36 ATOM 188 C LEU 23 -12.970 36.737 29.224 1.00 8.36 ATOM 189 O LEU 23 -13.842 37.542 28.904 1.00 8.36 ATOM 190 CB LEU 23 -12.309 36.704 31.598 1.00 8.36 ATOM 191 CG LEU 23 -12.772 38.150 31.807 1.00 8.36 ATOM 192 CD1 LEU 23 -14.239 38.178 32.227 1.00 8.36 ATOM 193 CD2 LEU 23 -11.936 38.820 32.896 1.00 8.36 ATOM 195 N ALA 24 -11.875 36.496 28.433 1.00 8.69 ATOM 196 CA ALA 24 -11.661 37.149 27.156 1.00 8.69 ATOM 197 C ALA 24 -12.807 36.836 26.183 1.00 8.69 ATOM 198 O ALA 24 -13.284 37.729 25.485 1.00 8.69 ATOM 199 CB ALA 24 -10.329 36.714 26.558 1.00 8.69 ATOM 201 N ALA 25 -13.195 35.532 26.211 1.00 9.15 ATOM 202 CA ALA 25 -14.275 35.170 25.419 1.00 9.15 ATOM 203 C ALA 25 -15.657 35.743 25.750 1.00 9.15 ATOM 204 O ALA 25 -16.401 36.116 24.846 1.00 9.15 ATOM 205 CB ALA 25 -14.316 33.647 25.441 1.00 9.15 ATOM 207 N ASN 26 -15.991 35.814 27.072 1.00 9.61 ATOM 208 CA ASN 26 -17.262 36.383 27.497 1.00 9.61 ATOM 209 C ASN 26 -17.285 37.778 27.048 1.00 9.61 ATOM 210 O ASN 26 -18.345 38.298 26.710 1.00 9.61 ATOM 211 CB ASN 26 -17.460 36.314 29.015 1.00 9.61 ATOM 212 CG ASN 26 -17.736 34.885 29.472 1.00 9.61 ATOM 213 ND2 ASN 26 -16.926 34.361 30.367 1.00 9.61 ATOM 214 OD1 ASN 26 -18.679 34.251 29.021 1.00 9.61 ATOM 216 N GLU 27 -16.152 38.529 26.985 1.00 9.80 ATOM 217 CA GLU 27 -16.111 39.847 26.530 1.00 9.80 ATOM 218 C GLU 27 -16.135 40.058 24.944 1.00 9.80 ATOM 219 O GLU 27 -16.084 41.192 24.472 1.00 9.80 ATOM 220 CB GLU 27 -14.860 40.498 27.128 1.00 9.80 ATOM 221 CG GLU 27 -14.970 40.629 28.648 1.00 9.80 ATOM 222 CD GLU 27 -16.063 41.620 29.033 1.00 9.80 ATOM 223 OE1 GLU 27 -16.400 41.682 30.219 1.00 9.80 ATOM 224 OE2 GLU 27 -16.557 42.313 28.136 1.00 9.80 ATOM 226 N LEU 28 -16.223 38.962 24.047 1.00 10.11 ATOM 227 CA LEU 28 -15.660 39.097 22.649 1.00 10.11 ATOM 228 C LEU 28 -14.165 39.259 22.746 1.00 10.11 ATOM 229 O LEU 28 -13.476 38.351 23.206 1.00 10.11 ATOM 230 CB LEU 28 -16.271 40.292 21.912 1.00 10.11 ATOM 231 CG LEU 28 -17.774 40.129 21.657 1.00 10.11 ATOM 232 CD1 LEU 28 -18.345 41.405 21.045 1.00 10.11 ATOM 233 CD2 LEU 28 -18.023 38.968 20.695 1.00 10.11 ATOM 235 N ARG 29 -13.583 40.340 22.360 1.00 9.94 ATOM 236 CA ARG 29 -12.225 40.242 21.861 1.00 9.94 ATOM 237 C ARG 29 -11.487 41.626 22.220 1.00 9.94 ATOM 238 O ARG 29 -12.125 42.677 22.239 1.00 9.94 ATOM 239 CB ARG 29 -12.177 39.998 20.351 1.00 9.94 ATOM 240 CG ARG 29 -12.777 41.168 19.571 1.00 9.94 ATOM 241 CD ARG 29 -12.923 40.813 18.092 1.00 9.94 ATOM 242 NE ARG 29 -13.334 42.011 17.328 1.00 9.94 ATOM 243 CZ ARG 29 -13.191 42.095 16.018 1.00 9.94 ATOM 244 NH1 ARG 29 -13.571 43.181 15.375 1.00 9.94 ATOM 245 NH2 ARG 29 -12.668 41.088 15.351 1.00 9.94 ATOM 247 N VAL 30 -10.142 41.701 22.507 1.00 10.29 ATOM 248 CA VAL 30 -9.231 42.417 21.723 1.00 10.29 ATOM 249 C VAL 30 -8.624 41.800 20.590 1.00 10.29 ATOM 250 O VAL 30 -7.414 41.582 20.581 1.00 10.29 ATOM 251 CB VAL 30 -8.144 42.920 22.699 1.00 10.29 ATOM 252 CG1 VAL 30 -7.051 43.672 21.941 1.00 10.29 ATOM 253 CG2 VAL 30 -8.754 43.866 23.733 1.00 10.29 ATOM 255 N THR 31 -9.506 41.485 19.523 1.00 10.44 ATOM 256 CA THR 31 -8.858 41.053 18.323 1.00 10.44 ATOM 257 C THR 31 -8.941 42.313 17.493 1.00 10.44 ATOM 258 O THR 31 -9.930 42.527 16.794 1.00 10.44 ATOM 259 CB THR 31 -9.535 39.891 17.570 1.00 10.44 ATOM 260 OG1 THR 31 -9.582 38.752 18.419 1.00 10.44 ATOM 261 CG2 THR 31 -8.765 39.526 16.303 1.00 10.44 ATOM 263 N GLU 32 -7.934 43.185 17.518 1.00 10.66 ATOM 264 CA GLU 32 -7.729 43.857 16.270 1.00 10.66 ATOM 265 C GLU 32 -6.539 43.400 15.613 1.00 10.66 ATOM 266 O GLU 32 -5.470 43.378 16.218 1.00 10.66 ATOM 267 CB GLU 32 -7.659 45.371 16.493 1.00 10.66 ATOM 268 CG GLU 32 -9.002 45.930 16.963 1.00 10.66 ATOM 269 CD GLU 32 -8.885 47.411 17.312 1.00 10.66 ATOM 270 OE1 GLU 32 -7.797 47.966 17.132 1.00 10.66 ATOM 271 OE2 GLU 32 -9.887 47.980 17.758 1.00 10.66 ATOM 273 N ARG 33 -6.701 43.024 14.330 1.00 11.13 ATOM 274 CA ARG 33 -5.472 42.823 13.627 1.00 11.13 ATOM 275 C ARG 33 -5.453 43.560 12.377 1.00 11.13 ATOM 276 O ARG 33 -5.247 42.971 11.317 1.00 11.13 ATOM 277 CB ARG 33 -5.255 41.331 13.359 1.00 11.13 ATOM 278 CG ARG 33 -5.239 40.522 14.657 1.00 11.13 ATOM 279 CD ARG 33 -4.984 39.043 14.369 1.00 11.13 ATOM 280 NE ARG 33 -3.607 38.863 13.864 1.00 11.13 ATOM 281 CZ ARG 33 -2.839 37.860 14.251 1.00 11.13 ATOM 282 NH1 ARG 33 -1.617 37.735 13.775 1.00 11.13 ATOM 283 NH2 ARG 33 -3.298 36.981 15.116 1.00 11.13 ATOM 284 N PRO 34 -5.681 44.936 12.582 1.00 11.45 ATOM 285 CA PRO 34 -6.239 45.655 11.392 1.00 11.45 ATOM 286 C PRO 34 -5.345 45.411 10.182 1.00 11.45 ATOM 287 O PRO 34 -5.845 45.192 9.081 1.00 11.45 ATOM 288 CB PRO 34 -6.239 47.133 11.790 1.00 11.45 ATOM 289 CG PRO 34 -6.367 47.144 13.297 1.00 11.45 ATOM 290 CD PRO 34 -5.408 46.085 13.815 1.00 11.45 ATOM 292 N PHE 35 -4.047 45.467 10.520 1.00 11.42 ATOM 293 CA PHE 35 -2.997 45.554 9.593 1.00 11.42 ATOM 294 C PHE 35 -2.709 44.351 8.587 1.00 11.42 ATOM 295 O PHE 35 -2.470 44.581 7.403 1.00 11.42 ATOM 296 CB PHE 35 -1.747 45.848 10.430 1.00 11.42 ATOM 297 CG PHE 35 -1.785 47.230 11.042 1.00 11.42 ATOM 298 CD1 PHE 35 -2.413 47.440 12.268 1.00 11.42 ATOM 299 CD2 PHE 35 -1.191 48.304 10.385 1.00 11.42 ATOM 300 CE1 PHE 35 -2.447 48.714 12.831 1.00 11.42 ATOM 301 CE2 PHE 35 -1.224 49.579 10.948 1.00 11.42 ATOM 302 CZ PHE 35 -1.851 49.782 12.171 1.00 11.42 ATOM 304 N TRP 36 -2.781 43.104 9.243 1.00 11.48 ATOM 305 CA TRP 36 -2.726 41.701 8.672 1.00 11.48 ATOM 306 C TRP 36 -1.468 41.743 7.910 1.00 11.48 ATOM 307 O TRP 36 -0.453 42.210 8.423 1.00 11.48 ATOM 308 CB TRP 36 -3.887 41.325 7.746 1.00 11.48 ATOM 309 CG TRP 36 -5.177 41.164 8.498 1.00 11.48 ATOM 310 CD1 TRP 36 -6.174 42.080 8.576 1.00 11.48 ATOM 311 CD2 TRP 36 -5.606 40.031 9.271 1.00 11.48 ATOM 312 NE1 TRP 36 -7.194 41.579 9.353 1.00 11.48 ATOM 313 CE2 TRP 36 -6.879 40.316 9.799 1.00 11.48 ATOM 314 CE3 TRP 36 -5.017 38.794 9.562 1.00 11.48 ATOM 315 CZ2 TRP 36 -7.565 39.406 10.599 1.00 11.48 ATOM 316 CZ3 TRP 36 -5.703 37.883 10.362 1.00 11.48 ATOM 317 CH2 TRP 36 -6.967 38.184 10.877 1.00 11.48 ATOM 319 N ILE 37 -1.413 41.286 6.661 1.00 11.32 ATOM 320 CA ILE 37 -0.332 40.362 6.184 1.00 11.32 ATOM 321 C ILE 37 1.015 41.041 6.337 1.00 11.32 ATOM 322 O ILE 37 1.970 40.421 6.797 1.00 11.32 ATOM 323 CB ILE 37 -0.552 39.941 4.714 1.00 11.32 ATOM 324 CG1 ILE 37 -1.793 39.048 4.594 1.00 11.32 ATOM 325 CG2 ILE 37 0.659 39.163 4.196 1.00 11.32 ATOM 326 CD1 ILE 37 -2.172 38.807 3.138 1.00 11.32 ATOM 328 N SER 38 0.992 42.327 5.926 1.00 10.61 ATOM 329 CA SER 38 2.043 43.220 6.082 1.00 10.61 ATOM 330 C SER 38 2.460 43.600 7.570 1.00 10.61 ATOM 331 O SER 38 3.588 44.030 7.803 1.00 10.61 ATOM 332 CB SER 38 1.672 44.485 5.306 1.00 10.61 ATOM 333 OG SER 38 0.557 45.121 5.914 1.00 10.61 ATOM 335 N SER 39 1.490 43.417 8.599 1.00 9.87 ATOM 336 CA SER 39 1.993 43.333 9.901 1.00 9.87 ATOM 337 C SER 39 1.817 41.986 10.735 1.00 9.87 ATOM 338 O SER 39 2.125 41.953 11.923 1.00 9.87 ATOM 339 CB SER 39 1.360 44.500 10.661 1.00 9.87 ATOM 340 OG SER 39 1.787 45.734 10.101 1.00 9.87 ATOM 342 N PHE 40 1.308 40.947 9.951 1.00 8.64 ATOM 343 CA PHE 40 1.417 39.658 10.450 1.00 8.64 ATOM 344 C PHE 40 2.764 39.109 10.742 1.00 8.64 ATOM 345 O PHE 40 2.952 38.441 11.756 1.00 8.64 ATOM 346 CB PHE 40 0.692 38.757 9.445 1.00 8.64 ATOM 347 CG PHE 40 0.722 37.303 9.860 1.00 8.64 ATOM 348 CD1 PHE 40 -0.237 36.799 10.734 1.00 8.64 ATOM 349 CD2 PHE 40 1.714 36.456 9.368 1.00 8.64 ATOM 350 CE1 PHE 40 -0.207 35.459 11.115 1.00 8.64 ATOM 351 CE2 PHE 40 1.745 35.116 9.749 1.00 8.64 ATOM 352 CZ PHE 40 0.785 34.618 10.621 1.00 8.64 ATOM 354 N ILE 41 3.796 39.303 9.966 1.00 8.03 ATOM 355 CA ILE 41 5.061 38.717 10.103 1.00 8.03 ATOM 356 C ILE 41 5.616 39.418 11.236 1.00 8.03 ATOM 357 O ILE 41 6.313 38.818 12.051 1.00 8.03 ATOM 358 CB ILE 41 5.988 38.871 8.877 1.00 8.03 ATOM 359 CG1 ILE 41 5.430 38.087 7.684 1.00 8.03 ATOM 360 CG2 ILE 41 7.387 38.338 9.197 1.00 8.03 ATOM 361 CD1 ILE 41 6.187 38.406 6.399 1.00 8.03 ATOM 363 N GLY 42 5.306 40.775 11.338 1.00 7.08 ATOM 364 CA GLY 42 5.074 41.347 12.700 1.00 7.08 ATOM 365 C GLY 42 6.386 41.513 13.328 1.00 7.08 ATOM 366 O GLY 42 7.408 41.429 12.651 1.00 7.08 ATOM 368 N ARG 43 6.258 41.748 14.690 1.00 6.17 ATOM 369 CA ARG 43 7.324 41.875 15.571 1.00 6.17 ATOM 370 C ARG 43 7.702 40.390 16.009 1.00 6.17 ATOM 371 O ARG 43 7.313 39.947 17.087 1.00 6.17 ATOM 372 CB ARG 43 6.986 42.716 16.804 1.00 6.17 ATOM 373 CG ARG 43 6.676 44.166 16.431 1.00 6.17 ATOM 374 CD ARG 43 7.828 44.777 15.634 1.00 6.17 ATOM 375 NE ARG 43 9.031 44.869 16.486 1.00 6.17 ATOM 376 CZ ARG 43 10.187 45.318 16.029 1.00 6.17 ATOM 377 NH1 ARG 43 11.237 45.385 16.823 1.00 6.17 ATOM 378 NH2 ARG 43 10.290 45.700 14.774 1.00 6.17 ATOM 380 N SER 44 8.422 39.767 15.147 1.00 5.94 ATOM 381 CA SER 44 9.011 38.513 15.247 1.00 5.94 ATOM 382 C SER 44 10.377 38.743 15.754 1.00 5.94 ATOM 383 O SER 44 11.139 37.794 15.925 1.00 5.94 ATOM 384 CB SER 44 9.071 37.773 13.909 1.00 5.94 ATOM 385 OG SER 44 9.917 38.468 13.006 1.00 5.94 ATOM 387 N LYS 45 10.612 40.048 15.979 1.00 5.28 ATOM 388 CA LYS 45 11.725 40.485 16.695 1.00 5.28 ATOM 389 C LYS 45 11.663 40.522 18.201 1.00 5.28 ATOM 390 O LYS 45 10.685 40.064 18.788 1.00 5.28 ATOM 391 CB LYS 45 12.053 41.877 16.147 1.00 5.28 ATOM 392 CG LYS 45 12.476 41.817 14.679 1.00 5.28 ATOM 393 CD LYS 45 12.738 43.221 14.134 1.00 5.28 ATOM 394 CE LYS 45 13.197 43.158 12.677 1.00 5.28 ATOM 395 NZ LYS 45 13.459 44.530 12.168 1.00 5.28 TER END