####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS257_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS257_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 10 - 27 4.96 19.09 LONGEST_CONTINUOUS_SEGMENT: 18 16 - 33 4.90 18.23 LONGEST_CONTINUOUS_SEGMENT: 18 17 - 34 4.71 17.97 LONGEST_CONTINUOUS_SEGMENT: 18 18 - 35 4.99 18.07 LCS_AVERAGE: 37.35 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 19 - 27 1.97 21.45 LCS_AVERAGE: 15.08 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 20 - 27 0.51 21.77 LCS_AVERAGE: 11.21 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 3 9 3 3 3 3 3 3 4 5 6 8 10 12 15 18 18 20 21 23 23 24 LCS_GDT V 3 V 3 3 5 9 3 3 4 4 5 5 5 5 5 7 8 8 8 9 13 15 17 17 20 23 LCS_GDT Q 4 Q 4 3 5 12 3 3 4 4 5 5 5 6 6 9 10 12 14 18 18 20 21 23 23 24 LCS_GDT G 5 G 5 3 5 14 2 3 4 4 5 5 6 8 11 11 12 14 15 18 19 20 21 23 23 25 LCS_GDT P 6 P 6 3 5 14 2 3 4 4 5 5 6 8 8 9 9 10 12 18 19 20 21 23 23 25 LCS_GDT W 7 W 7 3 5 14 2 3 4 4 5 5 6 9 11 11 12 14 15 18 19 20 21 23 23 26 LCS_GDT V 8 V 8 3 5 16 3 3 4 4 4 7 8 9 11 11 12 14 15 18 19 20 21 23 23 26 LCS_GDT G 9 G 9 3 5 17 3 3 4 4 4 5 8 9 11 11 11 12 15 18 19 20 21 23 23 25 LCS_GDT S 10 S 10 5 5 18 3 4 5 5 6 7 8 10 11 12 13 15 16 18 21 21 23 24 24 26 LCS_GDT S 11 S 11 5 5 18 3 4 5 5 6 8 10 11 11 13 14 16 17 19 21 21 23 24 24 26 LCS_GDT Y 12 Y 12 5 5 18 3 4 5 5 6 6 6 9 11 12 14 15 16 19 21 21 22 24 24 26 LCS_GDT V 13 V 13 5 6 18 3 4 5 5 6 8 10 11 12 13 14 16 17 19 21 21 23 24 24 26 LCS_GDT A 14 A 14 5 6 18 4 4 5 5 6 8 10 11 13 13 14 16 17 19 21 21 23 24 24 26 LCS_GDT E 15 E 15 4 6 18 4 4 4 5 6 8 10 11 12 13 14 15 16 18 21 21 23 24 24 26 LCS_GDT T 16 T 16 4 6 18 4 4 4 5 6 8 10 11 12 13 14 16 17 19 21 21 23 24 24 26 LCS_GDT G 17 G 17 4 6 18 4 4 4 5 6 8 10 11 13 13 14 16 17 19 21 21 23 24 24 26 LCS_GDT Q 18 Q 18 4 6 18 3 3 4 5 5 8 10 11 13 13 14 16 17 19 21 21 23 24 24 26 LCS_GDT N 19 N 19 4 9 18 3 3 5 5 6 8 10 11 13 13 14 16 17 19 21 21 23 24 24 26 LCS_GDT W 20 W 20 8 9 18 6 8 8 8 8 8 10 11 13 13 14 16 17 19 21 21 23 24 24 26 LCS_GDT A 21 A 21 8 9 18 6 8 8 8 8 8 10 11 12 13 14 16 16 19 21 21 23 24 24 26 LCS_GDT S 22 S 22 8 9 18 6 8 8 8 8 8 9 11 12 13 14 16 17 19 21 21 23 24 24 26 LCS_GDT L 23 L 23 8 9 18 6 8 8 8 8 8 9 11 13 13 14 16 17 19 21 21 23 24 24 26 LCS_GDT A 24 A 24 8 9 18 6 8 8 8 8 8 9 11 13 13 14 16 17 19 21 21 23 24 24 26 LCS_GDT A 25 A 25 8 9 18 6 8 8 8 8 8 9 11 13 13 14 16 17 19 21 21 23 24 24 26 LCS_GDT N 26 N 26 8 9 18 5 8 8 8 8 8 9 11 13 13 14 16 17 19 21 21 23 24 24 26 LCS_GDT E 27 E 27 8 9 18 5 8 8 8 8 8 9 11 11 13 13 16 17 18 21 21 23 24 24 26 LCS_GDT L 28 L 28 3 4 18 3 4 5 5 5 6 8 11 12 13 13 14 16 17 18 19 21 23 24 26 LCS_GDT R 29 R 29 3 4 18 3 4 5 5 6 6 8 11 12 13 13 16 17 18 20 21 23 24 24 26 LCS_GDT V 30 V 30 3 5 18 3 3 4 5 6 6 7 11 12 13 13 16 17 18 20 21 23 24 24 26 LCS_GDT T 31 T 31 3 6 18 3 3 5 5 6 7 8 11 13 13 14 16 17 19 21 21 23 24 24 26 LCS_GDT E 32 E 32 4 6 18 3 4 5 5 6 7 8 11 13 13 14 16 17 19 21 21 23 24 24 26 LCS_GDT R 33 R 33 4 6 18 3 4 5 5 6 7 8 11 13 13 14 16 17 19 21 21 23 24 24 26 LCS_GDT P 34 P 34 4 6 18 2 4 5 5 6 7 8 10 13 13 14 16 17 19 21 21 23 24 24 26 LCS_GDT F 35 F 35 4 7 18 3 4 5 5 7 10 11 11 12 13 14 14 15 17 18 19 21 23 23 26 LCS_GDT W 36 W 36 5 8 15 4 4 5 6 8 9 11 11 11 13 14 14 15 17 18 19 19 23 23 24 LCS_GDT I 37 I 37 5 8 15 4 4 5 7 8 10 11 11 12 13 14 14 14 15 17 18 19 20 21 23 LCS_GDT S 38 S 38 5 8 15 4 4 5 7 8 10 11 11 12 13 14 14 14 15 15 18 19 20 21 23 LCS_GDT S 39 S 39 5 8 15 4 4 5 7 8 10 11 11 12 13 14 14 14 15 15 15 19 20 21 22 LCS_GDT F 40 F 40 6 8 15 4 4 6 7 8 10 11 11 12 13 14 14 14 15 15 15 15 17 19 22 LCS_GDT I 41 I 41 6 8 15 4 4 6 7 8 10 11 11 12 13 14 14 14 15 15 15 15 19 20 22 LCS_GDT G 42 G 42 6 8 15 4 4 6 7 8 10 11 11 12 13 14 14 14 15 15 15 15 16 19 19 LCS_GDT R 43 R 43 6 8 15 4 4 6 7 8 10 11 11 12 13 14 14 14 15 15 15 15 15 16 19 LCS_GDT S 44 S 44 6 7 15 3 3 6 6 7 10 11 11 12 13 14 14 14 15 15 15 15 15 16 16 LCS_GDT K 45 K 45 6 7 15 3 4 6 6 8 10 11 11 12 13 14 14 14 15 15 15 15 15 15 15 LCS_AVERAGE LCS_A: 21.21 ( 11.21 15.08 37.35 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 8 8 8 8 10 11 11 13 13 14 16 17 19 21 21 23 24 24 26 GDT PERCENT_AT 13.64 18.18 18.18 18.18 18.18 22.73 25.00 25.00 29.55 29.55 31.82 36.36 38.64 43.18 47.73 47.73 52.27 54.55 54.55 59.09 GDT RMS_LOCAL 0.23 0.51 0.51 0.51 0.51 2.28 2.40 2.40 3.50 3.28 3.52 4.22 4.40 4.77 5.12 5.12 5.71 5.86 5.86 6.41 GDT RMS_ALL_AT 21.43 21.77 21.77 21.77 21.77 32.39 32.87 32.87 17.35 32.90 32.80 17.54 17.60 17.69 17.86 17.86 17.48 17.49 17.49 17.25 # Checking swapping # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 59.677 0 0.061 0.083 60.879 0.000 0.000 - LGA V 3 V 3 59.420 0 0.625 1.348 61.189 0.000 0.000 58.617 LGA Q 4 Q 4 57.285 0 0.649 0.821 64.396 0.000 0.000 64.076 LGA G 5 G 5 50.779 0 0.052 0.052 53.146 0.000 0.000 - LGA P 6 P 6 47.077 0 0.105 0.426 49.050 0.000 0.000 47.385 LGA W 7 W 7 47.486 0 0.330 0.307 52.824 0.000 0.000 48.991 LGA V 8 V 8 43.785 0 0.640 1.368 45.983 0.000 0.000 40.566 LGA G 9 G 9 44.757 0 0.222 0.222 46.023 0.000 0.000 - LGA S 10 S 10 44.891 0 0.648 0.581 45.317 0.000 0.000 44.468 LGA S 11 S 11 42.603 0 0.067 0.662 43.051 0.000 0.000 42.372 LGA Y 12 Y 12 39.774 0 0.077 0.448 41.911 0.000 0.000 41.911 LGA V 13 V 13 42.904 0 0.578 1.318 46.585 0.000 0.000 44.299 LGA A 14 A 14 46.354 0 0.604 0.594 48.387 0.000 0.000 - LGA E 15 E 15 48.627 0 0.036 1.382 52.378 0.000 0.000 52.378 LGA T 16 T 16 45.304 0 0.114 0.862 46.239 0.000 0.000 43.085 LGA G 17 G 17 44.475 0 0.536 0.536 44.718 0.000 0.000 - LGA Q 18 Q 18 38.608 0 0.637 1.286 42.221 0.000 0.000 42.221 LGA N 19 N 19 34.876 0 0.068 0.188 40.270 0.000 0.000 40.270 LGA W 20 W 20 32.039 0 0.624 0.439 38.207 0.000 0.000 34.976 LGA A 21 A 21 28.519 0 0.047 0.047 29.582 0.000 0.000 - LGA S 22 S 22 25.529 0 0.034 0.064 27.330 0.000 0.000 27.330 LGA L 23 L 23 27.499 0 0.020 0.858 30.272 0.000 0.000 29.503 LGA A 24 A 24 28.581 0 0.023 0.027 29.715 0.000 0.000 - LGA A 25 A 25 25.513 0 0.038 0.039 26.280 0.000 0.000 - LGA N 26 N 26 24.708 0 0.032 1.150 25.181 0.000 0.000 21.480 LGA E 27 E 27 26.179 0 0.629 1.093 29.937 0.000 0.000 28.320 LGA L 28 L 28 22.278 0 0.108 0.408 23.554 0.000 0.000 23.155 LGA R 29 R 29 20.902 0 0.340 1.560 31.271 0.000 0.000 31.271 LGA V 30 V 30 16.938 0 0.636 0.903 19.707 0.000 0.000 17.633 LGA T 31 T 31 13.818 0 0.675 1.326 18.705 0.000 0.000 16.361 LGA E 32 E 32 8.016 0 0.045 0.954 10.061 0.000 0.000 7.252 LGA R 33 R 33 8.676 0 0.656 1.493 18.699 0.000 0.000 18.699 LGA P 34 P 34 7.604 0 0.656 0.648 7.609 0.000 0.000 7.312 LGA F 35 F 35 2.700 0 0.619 1.279 10.035 15.455 10.413 10.035 LGA W 36 W 36 3.031 0 0.627 0.476 12.541 36.818 10.649 12.541 LGA I 37 I 37 2.231 0 0.095 1.031 5.878 48.182 26.136 5.878 LGA S 38 S 38 3.059 0 0.105 0.144 4.616 33.182 22.727 4.616 LGA S 39 S 39 2.869 0 0.136 0.230 3.813 30.455 26.667 2.986 LGA F 40 F 40 2.375 0 0.086 0.872 6.967 36.364 17.025 6.967 LGA I 41 I 41 1.626 0 0.619 0.921 3.160 42.727 50.455 1.432 LGA G 42 G 42 2.109 0 0.277 0.277 2.175 41.364 41.364 - LGA R 43 R 43 1.668 0 0.104 1.379 12.680 55.455 21.818 12.680 LGA S 44 S 44 2.743 0 0.655 0.601 6.569 52.273 35.152 6.569 LGA K 45 K 45 1.082 0 0.107 0.730 9.509 55.000 28.889 9.509 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 16.382 16.433 16.706 10.165 6.620 2.701 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 11 2.40 27.273 24.036 0.440 LGA_LOCAL RMSD: 2.398 Number of atoms: 11 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 32.867 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 16.382 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.494380 * X + 0.751233 * Y + -0.437307 * Z + 76.727280 Y_new = -0.699423 * X + 0.642508 * Y + 0.313035 * Z + -71.377403 Z_new = 0.516135 * X + 0.151104 * Y + 0.843073 * Z + 87.666557 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.955495 -0.542333 0.177347 [DEG: -54.7458 -31.0734 10.1613 ] ZXZ: -2.192064 0.567825 1.285994 [DEG: -125.5960 32.5340 73.6820 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS257_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS257_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 11 2.40 24.036 16.38 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS257_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 12 N ALA 2 -28.186 71.223 -15.159 1.00 15.00 N ATOM 14 CA ALA 2 -28.879 70.152 -15.898 1.00 15.00 C ATOM 15 CB ALA 2 -28.354 68.786 -15.463 1.00 15.00 C ATOM 16 C ALA 2 -30.400 70.224 -15.696 1.00 15.00 C ATOM 17 O ALA 2 -30.864 70.544 -14.595 1.00 15.00 O ATOM 18 N VAL 3 -31.155 69.928 -16.766 1.00 14.00 N ATOM 20 CA VAL 3 -32.632 69.940 -16.772 1.00 14.00 C ATOM 21 CB VAL 3 -33.195 70.773 -18.018 1.00 14.00 C ATOM 22 CG1 VAL 3 -32.838 70.117 -19.369 1.00 14.00 C ATOM 23 CG2 VAL 3 -34.703 71.046 -17.887 1.00 14.00 C ATOM 24 C VAL 3 -33.209 68.501 -16.686 1.00 14.00 C ATOM 25 O VAL 3 -34.215 68.279 -16.001 1.00 14.00 O ATOM 26 N GLN 4 -32.559 67.556 -17.382 1.00 11.56 N ATOM 28 CA GLN 4 -32.959 66.137 -17.423 1.00 11.56 C ATOM 29 CB GLN 4 -33.090 65.647 -18.875 1.00 11.56 C ATOM 30 CG GLN 4 -34.257 66.249 -19.651 1.00 11.56 C ATOM 31 CD GLN 4 -34.339 65.733 -21.074 1.00 11.56 C ATOM 32 OE1 GLN 4 -33.763 66.317 -21.992 1.00 11.56 O ATOM 33 NE2 GLN 4 -35.058 64.632 -21.266 1.00 11.56 N ATOM 36 C GLN 4 -31.972 65.242 -16.663 1.00 11.56 C ATOM 37 O GLN 4 -32.384 64.272 -16.018 1.00 11.56 O ATOM 38 N GLY 5 -30.681 65.582 -16.748 1.00 10.55 N ATOM 40 CA GLY 5 -29.636 64.821 -16.077 1.00 10.55 C ATOM 41 C GLY 5 -28.234 65.303 -16.438 1.00 10.55 C ATOM 42 O GLY 5 -28.099 65.955 -17.480 1.00 10.55 O ATOM 43 N PRO 6 -27.173 65.026 -15.619 1.00 9.15 N ATOM 44 CD PRO 6 -27.232 64.461 -14.251 1.00 9.15 C ATOM 45 CA PRO 6 -25.789 65.458 -15.906 1.00 9.15 C ATOM 46 CB PRO 6 -25.036 65.072 -14.629 1.00 9.15 C ATOM 47 CG PRO 6 -26.081 65.153 -13.573 1.00 9.15 C ATOM 48 C PRO 6 -25.130 64.811 -17.145 1.00 9.15 C ATOM 49 O PRO 6 -24.332 65.461 -17.830 1.00 9.15 O ATOM 50 N TRP 7 -25.491 63.543 -17.419 1.00 8.27 N ATOM 52 CA TRP 7 -24.998 62.701 -18.544 1.00 8.27 C ATOM 53 CB TRP 7 -25.591 63.149 -19.908 1.00 8.27 C ATOM 54 CG TRP 7 -27.121 62.991 -20.070 1.00 8.27 C ATOM 55 CD2 TRP 7 -27.845 61.811 -20.490 1.00 8.27 C ATOM 56 CE2 TRP 7 -29.225 62.161 -20.529 1.00 8.27 C ATOM 57 CE3 TRP 7 -27.466 60.493 -20.837 1.00 8.27 C ATOM 58 CD1 TRP 7 -28.072 63.966 -19.881 1.00 8.27 C ATOM 59 NE1 TRP 7 -29.325 63.474 -20.154 1.00 8.27 N ATOM 61 CZ2 TRP 7 -30.235 61.241 -20.901 1.00 8.27 C ATOM 62 CZ3 TRP 7 -28.475 59.570 -21.211 1.00 8.27 C ATOM 63 CH2 TRP 7 -29.844 59.958 -21.237 1.00 8.27 C ATOM 64 C TRP 7 -23.472 62.512 -18.670 1.00 8.27 C ATOM 65 O TRP 7 -22.708 63.472 -18.511 1.00 8.27 O ATOM 66 N VAL 8 -23.054 61.270 -18.952 1.00 8.04 N ATOM 68 CA VAL 8 -21.636 60.883 -19.112 1.00 8.04 C ATOM 69 CB VAL 8 -21.217 59.702 -18.142 1.00 8.04 C ATOM 70 CG1 VAL 8 -21.037 60.234 -16.728 1.00 8.04 C ATOM 71 CG2 VAL 8 -22.258 58.558 -18.141 1.00 8.04 C ATOM 72 C VAL 8 -21.264 60.550 -20.570 1.00 8.04 C ATOM 73 O VAL 8 -22.074 59.966 -21.303 1.00 8.04 O ATOM 74 N GLY 9 -20.053 60.946 -20.975 1.00 7.76 N ATOM 76 CA GLY 9 -19.568 60.698 -22.326 1.00 7.76 C ATOM 77 C GLY 9 -18.233 59.973 -22.345 1.00 7.76 C ATOM 78 O GLY 9 -17.867 59.383 -23.368 1.00 7.76 O ATOM 79 N SER 10 -17.521 60.020 -21.212 1.00 6.63 N ATOM 81 CA SER 10 -16.207 59.381 -21.037 1.00 6.63 C ATOM 82 CB SER 10 -15.210 60.371 -20.418 1.00 6.63 C ATOM 83 OG SER 10 -15.739 60.974 -19.249 1.00 6.63 O ATOM 85 C SER 10 -16.278 58.095 -20.193 1.00 6.63 C ATOM 86 O SER 10 -17.045 58.026 -19.224 1.00 6.63 O ATOM 87 N SER 11 -15.481 57.091 -20.587 1.00 5.87 N ATOM 89 CA SER 11 -15.391 55.767 -19.934 1.00 5.87 C ATOM 90 OG SER 11 -13.397 55.253 -21.245 1.00 5.87 O ATOM 92 C SER 11 -14.753 55.729 -18.529 1.00 5.87 C ATOM 93 O SER 11 -15.202 54.960 -17.669 1.00 5.87 O ATOM 94 CB SER 11 -14.674 54.773 -20.856 1.00 5.87 C ATOM 95 N TYR 12 -13.723 56.561 -18.314 1.00 5.82 N ATOM 97 CA TYR 12 -12.970 56.651 -17.043 1.00 5.82 C ATOM 98 CB TYR 12 -11.625 57.403 -17.258 1.00 5.82 C ATOM 99 CG TYR 12 -11.668 58.753 -17.995 1.00 5.82 C ATOM 100 CD1 TYR 12 -11.791 59.971 -17.282 1.00 5.82 C ATOM 101 CE1 TYR 12 -11.796 61.225 -17.957 1.00 5.82 C ATOM 102 CD2 TYR 12 -11.551 58.822 -19.406 1.00 5.82 C ATOM 103 CE2 TYR 12 -11.555 60.070 -20.088 1.00 5.82 C ATOM 104 CZ TYR 12 -11.678 61.261 -19.356 1.00 5.82 C ATOM 105 OH TYR 12 -11.683 62.473 -20.009 1.00 5.82 O ATOM 107 C TYR 12 -13.714 57.208 -15.808 1.00 5.82 C ATOM 108 O TYR 12 -13.614 56.626 -14.720 1.00 5.82 O ATOM 109 N VAL 13 -14.446 58.318 -15.988 1.00 5.40 N ATOM 111 CA VAL 13 -15.218 58.974 -14.909 1.00 5.40 C ATOM 112 CB VAL 13 -14.937 60.530 -14.818 1.00 5.40 C ATOM 113 CG1 VAL 13 -13.572 60.773 -14.192 1.00 5.40 C ATOM 114 CG2 VAL 13 -15.006 61.213 -16.200 1.00 5.40 C ATOM 115 C VAL 13 -16.737 58.690 -14.963 1.00 5.40 C ATOM 116 O VAL 13 -17.319 58.620 -16.054 1.00 5.40 O ATOM 117 N ALA 14 -17.345 58.506 -13.782 1.00 4.43 N ATOM 119 CA ALA 14 -18.782 58.225 -13.624 1.00 4.43 C ATOM 120 CB ALA 14 -18.983 56.919 -12.851 1.00 4.43 C ATOM 121 C ALA 14 -19.497 59.380 -12.906 1.00 4.43 C ATOM 122 O ALA 14 -18.849 60.165 -12.202 1.00 4.43 O ATOM 123 N GLU 15 -20.824 59.467 -13.091 1.00 3.84 N ATOM 125 CA GLU 15 -21.692 60.504 -12.490 1.00 3.84 C ATOM 126 CB GLU 15 -23.068 60.555 -13.207 1.00 3.84 C ATOM 127 CG GLU 15 -23.838 59.214 -13.413 1.00 3.84 C ATOM 128 CD GLU 15 -23.602 58.579 -14.780 1.00 3.84 C ATOM 129 OE1 GLU 15 -22.649 57.784 -14.911 1.00 3.84 O ATOM 130 OE2 GLU 15 -24.372 58.879 -15.717 1.00 3.84 O ATOM 131 C GLU 15 -21.872 60.432 -10.956 1.00 3.84 C ATOM 132 O GLU 15 -21.844 61.468 -10.280 1.00 3.84 O ATOM 133 N THR 16 -22.052 59.208 -10.435 1.00 3.96 N ATOM 135 CA THR 16 -22.243 58.924 -8.994 1.00 3.96 C ATOM 136 CB THR 16 -22.749 57.459 -8.769 1.00 3.96 C ATOM 137 OG1 THR 16 -23.349 56.968 -9.974 1.00 3.96 O ATOM 139 CG2 THR 16 -23.801 57.407 -7.651 1.00 3.96 C ATOM 140 C THR 16 -20.967 59.181 -8.158 1.00 3.96 C ATOM 141 O THR 16 -21.052 59.683 -7.030 1.00 3.96 O ATOM 142 N GLY 17 -19.806 58.852 -8.735 1.00 4.01 N ATOM 144 CA GLY 17 -18.526 59.040 -8.063 1.00 4.01 C ATOM 145 C GLY 17 -17.740 57.748 -7.919 1.00 4.01 C ATOM 146 O GLY 17 -18.183 56.831 -7.217 1.00 4.01 O ATOM 147 N GLN 18 -16.580 57.685 -8.586 1.00 3.04 N ATOM 149 CA GLN 18 -15.666 56.524 -8.580 1.00 3.04 C ATOM 150 CB GLN 18 -14.649 56.614 -9.742 1.00 3.04 C ATOM 151 CG GLN 18 -13.917 57.961 -9.932 1.00 3.04 C ATOM 152 CD GLN 18 -12.944 57.935 -11.096 1.00 3.04 C ATOM 153 OE1 GLN 18 -13.304 58.262 -12.226 1.00 3.04 O ATOM 154 NE2 GLN 18 -11.703 57.545 -10.824 1.00 3.04 N ATOM 157 C GLN 18 -14.953 56.236 -7.239 1.00 3.04 C ATOM 158 O GLN 18 -14.849 55.073 -6.829 1.00 3.04 O ATOM 159 N ASN 19 -14.493 57.305 -6.570 1.00 3.16 N ATOM 161 CA ASN 19 -13.784 57.243 -5.273 1.00 3.16 C ATOM 162 CB ASN 19 -13.141 58.601 -4.941 1.00 3.16 C ATOM 163 CG ASN 19 -12.030 58.985 -5.914 1.00 3.16 C ATOM 164 OD1 ASN 19 -12.275 59.641 -6.929 1.00 3.16 O ATOM 165 ND2 ASN 19 -10.800 58.592 -5.595 1.00 3.16 N ATOM 168 C ASN 19 -14.684 56.788 -4.108 1.00 3.16 C ATOM 169 O ASN 19 -14.283 55.923 -3.321 1.00 3.16 O ATOM 170 N TRP 20 -15.901 57.349 -4.038 1.00 3.15 N ATOM 172 CA TRP 20 -16.908 57.033 -3.002 1.00 3.15 C ATOM 173 CB TRP 20 -18.075 58.045 -3.054 1.00 3.15 C ATOM 174 CG TRP 20 -17.711 59.522 -2.765 1.00 3.15 C ATOM 175 CD2 TRP 20 -17.649 60.179 -1.478 1.00 3.15 C ATOM 176 CE2 TRP 20 -17.313 61.541 -1.721 1.00 3.15 C ATOM 177 CE3 TRP 20 -17.846 59.752 -0.144 1.00 3.15 C ATOM 178 CD1 TRP 20 -17.416 60.491 -3.696 1.00 3.15 C ATOM 179 NE1 TRP 20 -17.179 61.695 -3.075 1.00 3.15 N ATOM 181 CZ2 TRP 20 -17.167 62.489 -0.677 1.00 3.15 C ATOM 182 CZ3 TRP 20 -17.701 60.698 0.903 1.00 3.15 C ATOM 183 CH2 TRP 20 -17.364 62.052 0.620 1.00 3.15 C ATOM 184 C TRP 20 -17.448 55.600 -3.152 1.00 3.15 C ATOM 185 O TRP 20 -17.655 54.905 -2.150 1.00 3.15 O ATOM 186 N ALA 21 -17.641 55.173 -4.412 1.00 2.68 N ATOM 188 CA ALA 21 -18.134 53.831 -4.783 1.00 2.68 C ATOM 189 CB ALA 21 -18.503 53.798 -6.261 1.00 2.68 C ATOM 190 C ALA 21 -17.105 52.732 -4.464 1.00 2.68 C ATOM 191 O ALA 21 -17.475 51.660 -3.971 1.00 2.68 O ATOM 192 N SER 22 -15.824 53.029 -4.736 1.00 2.66 N ATOM 194 CA SER 22 -14.684 52.121 -4.493 1.00 2.66 C ATOM 195 CB SER 22 -13.421 52.642 -5.195 1.00 2.66 C ATOM 196 OG SER 22 -13.127 53.976 -4.814 1.00 2.66 O ATOM 198 C SER 22 -14.413 51.896 -2.991 1.00 2.66 C ATOM 199 O SER 22 -14.209 50.753 -2.565 1.00 2.66 O ATOM 200 N LEU 23 -14.431 52.990 -2.212 1.00 2.82 N ATOM 202 CA LEU 23 -14.217 52.975 -0.750 1.00 2.82 C ATOM 203 CB LEU 23 -13.983 54.411 -0.211 1.00 2.82 C ATOM 204 CG LEU 23 -12.661 55.229 -0.103 1.00 2.82 C ATOM 205 CD1 LEU 23 -11.761 54.723 1.038 1.00 2.82 C ATOM 206 CD2 LEU 23 -11.870 55.344 -1.421 1.00 2.82 C ATOM 207 C LEU 23 -15.371 52.301 0.013 1.00 2.82 C ATOM 208 O LEU 23 -15.131 51.592 0.997 1.00 2.82 O ATOM 209 N ALA 24 -16.608 52.534 -0.453 1.00 2.95 N ATOM 211 CA ALA 24 -17.842 51.959 0.123 1.00 2.95 C ATOM 212 CB ALA 24 -19.069 52.669 -0.439 1.00 2.95 C ATOM 213 C ALA 24 -17.945 50.442 -0.124 1.00 2.95 C ATOM 214 O ALA 24 -18.332 49.691 0.779 1.00 2.95 O ATOM 215 N ALA 25 -17.602 50.021 -1.350 1.00 3.04 N ATOM 217 CA ALA 25 -17.614 48.612 -1.797 1.00 3.04 C ATOM 218 CB ALA 25 -17.500 48.542 -3.316 1.00 3.04 C ATOM 219 C ALA 25 -16.529 47.737 -1.144 1.00 3.04 C ATOM 220 O ALA 25 -16.802 46.591 -0.765 1.00 3.04 O ATOM 221 N ASN 26 -15.312 48.289 -1.024 1.00 3.29 N ATOM 223 CA ASN 26 -14.134 47.620 -0.427 1.00 3.29 C ATOM 224 CB ASN 26 -12.858 48.426 -0.742 1.00 3.29 C ATOM 225 CG ASN 26 -11.612 47.548 -0.880 1.00 3.29 C ATOM 226 OD1 ASN 26 -10.900 47.300 0.096 1.00 3.29 O ATOM 227 ND2 ASN 26 -11.340 47.089 -2.099 1.00 3.29 N ATOM 230 C ASN 26 -14.267 47.401 1.098 1.00 3.29 C ATOM 231 O ASN 26 -13.830 46.365 1.613 1.00 3.29 O ATOM 232 N GLU 27 -14.876 48.380 1.790 1.00 3.32 N ATOM 234 CA GLU 27 -15.122 48.408 3.261 1.00 3.32 C ATOM 235 CG GLU 27 -17.595 47.660 3.197 1.00 3.32 C ATOM 236 CD GLU 27 -18.599 46.614 3.645 1.00 3.32 C ATOM 237 OE1 GLU 27 -19.196 46.785 4.729 1.00 3.32 O ATOM 238 OE2 GLU 27 -18.794 45.622 2.911 1.00 3.32 O ATOM 239 C GLU 27 -13.874 48.305 4.163 1.00 3.32 C ATOM 240 O GLU 27 -13.011 47.445 3.941 1.00 3.32 O ATOM 241 CB GLU 27 -16.182 47.372 3.696 1.00 3.32 C ATOM 242 N LEU 28 -13.795 49.198 5.159 1.00 3.65 N ATOM 244 CA LEU 28 -12.683 49.268 6.128 1.00 3.65 C ATOM 245 CB LEU 28 -12.021 50.667 6.095 1.00 3.65 C ATOM 246 CG LEU 28 -11.227 51.156 4.869 1.00 3.65 C ATOM 247 CD1 LEU 28 -11.628 52.589 4.549 1.00 3.65 C ATOM 248 CD2 LEU 28 -9.709 51.060 5.094 1.00 3.65 C ATOM 249 C LEU 28 -13.159 48.946 7.556 1.00 3.65 C ATOM 250 O LEU 28 -12.334 48.697 8.447 1.00 3.65 O ATOM 251 N ARG 29 -14.486 48.911 7.745 1.00 4.14 N ATOM 253 CA ARG 29 -15.136 48.633 9.042 1.00 4.14 C ATOM 254 CB ARG 29 -16.489 49.375 9.151 1.00 4.14 C ATOM 255 CG ARG 29 -17.462 49.251 7.952 1.00 4.14 C ATOM 256 CD ARG 29 -18.758 50.028 8.176 1.00 4.14 C ATOM 257 NE ARG 29 -19.604 49.440 9.219 1.00 4.14 N ATOM 259 CZ ARG 29 -20.786 49.916 9.610 1.00 4.14 C ATOM 260 NH1 ARG 29 -21.458 49.293 10.567 1.00 4.14 N ATOM 263 NH2 ARG 29 -21.306 51.007 9.056 1.00 4.14 N ATOM 266 C ARG 29 -15.292 47.141 9.417 1.00 4.14 C ATOM 267 O ARG 29 -15.177 46.786 10.597 1.00 4.14 O ATOM 268 N VAL 30 -15.546 46.293 8.409 1.00 5.75 N ATOM 270 CA VAL 30 -15.726 44.835 8.581 1.00 5.75 C ATOM 271 CB VAL 30 -16.943 44.275 7.740 1.00 5.75 C ATOM 272 CG1 VAL 30 -18.255 44.662 8.407 1.00 5.75 C ATOM 273 CG2 VAL 30 -16.924 44.790 6.284 1.00 5.75 C ATOM 274 C VAL 30 -14.450 44.000 8.328 1.00 5.75 C ATOM 275 O VAL 30 -14.143 43.090 9.108 1.00 5.75 O ATOM 276 N THR 31 -13.723 44.327 7.247 1.00 6.18 N ATOM 278 CA THR 31 -12.476 43.644 6.848 1.00 6.18 C ATOM 279 CB THR 31 -12.525 43.150 5.336 1.00 6.18 C ATOM 280 OG1 THR 31 -11.260 42.593 4.956 1.00 6.18 O ATOM 282 CG2 THR 31 -12.917 44.281 4.358 1.00 6.18 C ATOM 283 C THR 31 -11.218 44.498 7.136 1.00 6.18 C ATOM 284 O THR 31 -11.238 45.721 6.939 1.00 6.18 O ATOM 285 N GLU 32 -10.155 43.840 7.619 1.00 5.69 N ATOM 287 CA GLU 32 -8.866 44.479 7.952 1.00 5.69 C ATOM 288 CB GLU 32 -8.498 44.241 9.429 1.00 5.69 C ATOM 289 CG GLU 32 -9.425 44.919 10.437 1.00 5.69 C ATOM 290 CD GLU 32 -9.068 44.590 11.875 1.00 5.69 C ATOM 291 OE1 GLU 32 -8.274 45.340 12.479 1.00 5.69 O ATOM 292 OE2 GLU 32 -9.588 43.584 12.404 1.00 5.69 O ATOM 293 C GLU 32 -7.743 43.957 7.039 1.00 5.69 C ATOM 294 O GLU 32 -7.597 42.738 6.866 1.00 5.69 O ATOM 295 N ARG 33 -6.996 44.887 6.426 1.00 5.46 N ATOM 297 CA ARG 33 -5.876 44.574 5.516 1.00 5.46 C ATOM 298 CB ARG 33 -6.137 45.116 4.097 1.00 5.46 C ATOM 299 CG ARG 33 -7.272 44.418 3.344 1.00 5.46 C ATOM 300 CD ARG 33 -7.481 44.998 1.945 1.00 5.46 C ATOM 301 NE ARG 33 -6.381 44.686 1.028 1.00 5.46 N ATOM 303 CZ ARG 33 -6.311 45.070 -0.247 1.00 5.46 C ATOM 304 NH1 ARG 33 -5.260 44.725 -0.978 1.00 5.46 N ATOM 307 NH2 ARG 33 -7.278 45.796 -0.802 1.00 5.46 N ATOM 310 C ARG 33 -4.477 45.033 6.015 1.00 5.46 C ATOM 311 O ARG 33 -3.516 44.272 5.846 1.00 5.46 O ATOM 312 N PRO 34 -4.329 46.258 6.629 1.00 7.48 N ATOM 313 CD PRO 34 -5.264 47.405 6.760 1.00 7.48 C ATOM 314 CA PRO 34 -2.982 46.666 7.095 1.00 7.48 C ATOM 315 CB PRO 34 -3.166 48.153 7.426 1.00 7.48 C ATOM 316 CG PRO 34 -4.615 48.259 7.807 1.00 7.48 C ATOM 317 C PRO 34 -2.354 45.883 8.280 1.00 7.48 C ATOM 318 O PRO 34 -1.124 45.812 8.391 1.00 7.48 O ATOM 319 N PHE 35 -3.213 45.314 9.137 1.00 8.21 N ATOM 321 CA PHE 35 -2.820 44.534 10.332 1.00 8.21 C ATOM 322 CB PHE 35 -4.041 44.326 11.264 1.00 8.21 C ATOM 323 CG PHE 35 -4.600 45.609 11.881 1.00 8.21 C ATOM 324 CD1 PHE 35 -4.162 46.049 13.153 1.00 8.21 C ATOM 325 CD2 PHE 35 -5.594 46.363 11.211 1.00 8.21 C ATOM 326 CE1 PHE 35 -4.704 47.221 13.751 1.00 8.21 C ATOM 327 CE2 PHE 35 -6.144 47.537 11.796 1.00 8.21 C ATOM 328 CZ PHE 35 -5.696 47.967 13.070 1.00 8.21 C ATOM 329 C PHE 35 -2.140 43.181 10.049 1.00 8.21 C ATOM 330 O PHE 35 -1.148 42.843 10.708 1.00 8.21 O ATOM 331 N TRP 36 -2.666 42.436 9.065 1.00 6.87 N ATOM 333 CA TRP 36 -2.153 41.112 8.651 1.00 6.87 C ATOM 334 CB TRP 36 -3.169 40.403 7.729 1.00 6.87 C ATOM 335 CG TRP 36 -4.523 40.023 8.375 1.00 6.87 C ATOM 336 CD2 TRP 36 -4.852 38.805 9.083 1.00 6.87 C ATOM 337 CE2 TRP 36 -6.222 38.895 9.456 1.00 6.87 C ATOM 338 CE3 TRP 36 -4.122 37.646 9.438 1.00 6.87 C ATOM 339 CD1 TRP 36 -5.681 40.769 8.356 1.00 6.87 C ATOM 340 NE1 TRP 36 -6.693 40.098 9.000 1.00 6.87 N ATOM 342 CZ2 TRP 36 -6.887 37.869 10.171 1.00 6.87 C ATOM 343 CZ3 TRP 36 -4.785 36.617 10.155 1.00 6.87 C ATOM 344 CH2 TRP 36 -6.158 36.744 10.509 1.00 6.87 C ATOM 345 C TRP 36 -0.769 41.153 7.976 1.00 6.87 C ATOM 346 O TRP 36 0.094 40.321 8.285 1.00 6.87 O ATOM 347 N ILE 37 -0.569 42.135 7.083 1.00 5.95 N ATOM 349 CA ILE 37 0.694 42.347 6.337 1.00 5.95 C ATOM 350 CB ILE 37 0.513 43.387 5.131 1.00 5.95 C ATOM 351 CG2 ILE 37 1.752 43.378 4.184 1.00 5.95 C ATOM 352 CG1 ILE 37 -0.833 43.189 4.370 1.00 5.95 C ATOM 353 CD1 ILE 37 -1.054 41.890 3.494 1.00 5.95 C ATOM 354 C ILE 37 1.809 42.815 7.305 1.00 5.95 C ATOM 355 O ILE 37 2.942 42.326 7.223 1.00 5.95 O ATOM 356 N SER 38 1.453 43.710 8.240 1.00 7.17 N ATOM 358 CA SER 38 2.372 44.269 9.253 1.00 7.17 C ATOM 359 CB SER 38 1.724 45.462 9.968 1.00 7.17 C ATOM 360 OG SER 38 0.473 45.113 10.537 1.00 7.17 O ATOM 362 C SER 38 2.831 43.212 10.275 1.00 7.17 C ATOM 363 O SER 38 4.007 43.185 10.654 1.00 7.17 O ATOM 364 N SER 39 1.887 42.360 10.708 1.00 7.34 N ATOM 366 CA SER 39 2.126 41.262 11.665 1.00 7.34 C ATOM 367 CB SER 39 0.795 40.713 12.196 1.00 7.34 C ATOM 368 OG SER 39 -0.056 40.289 11.142 1.00 7.34 O ATOM 370 C SER 39 2.974 40.118 11.072 1.00 7.34 C ATOM 371 O SER 39 3.804 39.534 11.775 1.00 7.34 O ATOM 372 N PHE 40 2.741 39.814 9.785 1.00 6.30 N ATOM 374 CA PHE 40 3.445 38.755 9.029 1.00 6.30 C ATOM 375 CB PHE 40 2.685 38.454 7.705 1.00 6.30 C ATOM 376 CG PHE 40 2.871 37.033 7.160 1.00 6.30 C ATOM 377 CD1 PHE 40 3.914 36.736 6.249 1.00 6.30 C ATOM 378 CD2 PHE 40 1.980 35.994 7.526 1.00 6.30 C ATOM 379 CE1 PHE 40 4.069 35.429 5.709 1.00 6.30 C ATOM 380 CE2 PHE 40 2.123 34.682 6.995 1.00 6.30 C ATOM 381 CZ PHE 40 3.170 34.400 6.084 1.00 6.30 C ATOM 382 C PHE 40 4.931 39.081 8.744 1.00 6.30 C ATOM 383 O PHE 40 5.796 38.224 8.950 1.00 6.30 O ATOM 384 N ILE 41 5.203 40.310 8.276 1.00 6.50 N ATOM 386 CA ILE 41 6.565 40.801 7.953 1.00 6.50 C ATOM 387 CB ILE 41 6.521 42.115 7.032 1.00 6.50 C ATOM 388 CG2 ILE 41 7.950 42.669 6.737 1.00 6.50 C ATOM 389 CG1 ILE 41 5.685 41.895 5.736 1.00 6.50 C ATOM 390 CD1 ILE 41 6.229 40.927 4.608 1.00 6.50 C ATOM 391 C ILE 41 7.435 41.015 9.214 1.00 6.50 C ATOM 392 O ILE 41 8.640 40.737 9.191 1.00 6.50 O ATOM 393 N GLY 42 6.808 41.489 10.298 1.00 6.87 N ATOM 395 CA GLY 42 7.504 41.754 11.555 1.00 6.87 C ATOM 396 C GLY 42 7.610 40.588 12.529 1.00 6.87 C ATOM 397 O GLY 42 8.724 40.181 12.880 1.00 6.87 O ATOM 398 N ARG 43 6.451 40.055 12.951 1.00 6.22 N ATOM 400 CA ARG 43 6.295 38.920 13.901 1.00 6.22 C ATOM 401 CB ARG 43 6.758 37.580 13.292 1.00 6.22 C ATOM 402 CG ARG 43 5.893 37.069 12.138 1.00 6.22 C ATOM 403 CD ARG 43 6.399 35.739 11.580 1.00 6.22 C ATOM 404 NE ARG 43 7.670 35.868 10.862 1.00 6.22 N ATOM 406 CZ ARG 43 8.331 34.865 10.283 1.00 6.22 C ATOM 407 NH1 ARG 43 9.477 35.110 9.661 1.00 6.22 N ATOM 410 NH2 ARG 43 7.863 33.621 10.316 1.00 6.22 N ATOM 413 C ARG 43 6.918 39.109 15.300 1.00 6.22 C ATOM 414 O ARG 43 8.063 39.568 15.419 1.00 6.22 O ATOM 415 N SER 44 6.147 38.760 16.340 1.00 6.27 N ATOM 417 CA SER 44 6.561 38.866 17.752 1.00 6.27 C ATOM 418 CB SER 44 5.499 39.618 18.564 1.00 6.27 C ATOM 419 OG SER 44 5.303 40.930 18.061 1.00 6.27 O ATOM 421 C SER 44 6.809 37.485 18.377 1.00 6.27 C ATOM 422 O SER 44 7.695 37.341 19.229 1.00 6.27 O ATOM 423 N LYS 45 6.029 36.481 17.934 1.00 8.82 N ATOM 425 CA LYS 45 6.068 35.060 18.383 1.00 8.82 C ATOM 426 CG LYS 45 7.461 34.157 16.401 1.00 8.82 C ATOM 427 CD LYS 45 8.756 33.459 16.020 1.00 8.82 C ATOM 428 CE LYS 45 8.876 33.303 14.513 1.00 8.82 C ATOM 429 NZ LYS 45 10.141 32.621 14.125 1.00 8.82 N ATOM 433 C LYS 45 5.845 34.812 19.889 1.00 8.82 C ATOM 434 O LYS 45 6.414 35.521 20.729 1.00 8.82 O ATOM 435 CB LYS 45 7.349 34.336 17.911 1.00 8.82 C TER END