####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS279_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS279_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 32 - 45 4.75 18.07 LCS_AVERAGE: 27.63 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 39 - 45 1.32 18.69 LCS_AVERAGE: 11.67 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 39 - 43 0.41 19.93 LCS_AVERAGE: 8.11 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 9 3 3 3 4 4 4 5 6 6 7 8 8 8 10 11 12 12 15 19 20 LCS_GDT V 3 V 3 4 5 9 3 3 4 4 5 5 5 6 6 7 8 8 8 10 11 13 14 16 19 20 LCS_GDT Q 4 Q 4 4 5 9 3 3 4 4 5 5 5 6 6 7 8 8 8 8 12 13 15 17 19 22 LCS_GDT G 5 G 5 4 5 9 3 3 4 4 5 5 6 6 6 7 8 10 10 11 13 16 19 19 21 22 LCS_GDT P 6 P 6 4 5 9 3 3 4 4 5 5 6 6 8 8 9 10 11 14 15 18 24 27 27 28 LCS_GDT W 7 W 7 3 5 9 3 3 4 4 5 5 6 6 8 8 8 10 11 13 18 21 24 27 27 28 LCS_GDT V 8 V 8 3 5 9 3 3 4 4 5 5 6 6 8 10 11 12 13 14 15 21 24 27 27 28 LCS_GDT G 9 G 9 3 5 9 3 3 4 4 5 5 6 6 8 10 11 12 14 15 18 21 24 27 27 28 LCS_GDT S 10 S 10 3 5 9 0 3 3 3 5 5 6 7 10 10 11 12 14 17 18 22 24 27 27 28 LCS_GDT S 11 S 11 3 3 12 3 3 3 3 4 5 6 6 10 11 15 15 18 19 19 22 24 27 27 28 LCS_GDT Y 12 Y 12 3 3 12 3 4 4 6 6 7 9 9 10 11 15 15 18 19 19 22 24 27 27 28 LCS_GDT V 13 V 13 3 3 12 3 4 4 6 6 7 9 9 10 12 15 16 18 19 19 22 24 27 27 28 LCS_GDT A 14 A 14 3 3 12 3 4 4 6 6 7 9 9 12 13 15 16 18 19 19 22 24 27 27 28 LCS_GDT E 15 E 15 3 5 12 3 3 4 8 8 9 10 11 12 13 15 16 18 19 19 22 24 27 27 28 LCS_GDT T 16 T 16 3 5 12 3 3 5 8 8 9 10 11 12 13 15 16 18 19 19 22 24 27 27 28 LCS_GDT G 17 G 17 3 5 12 3 3 5 8 8 9 10 11 12 13 15 16 18 19 19 22 24 27 27 28 LCS_GDT Q 18 Q 18 4 5 12 3 3 5 8 8 9 10 11 12 13 15 16 18 19 19 22 24 27 27 28 LCS_GDT N 19 N 19 4 5 12 3 3 4 5 6 8 10 11 12 13 14 16 18 19 19 20 21 23 26 28 LCS_GDT W 20 W 20 4 5 12 3 3 4 4 5 6 6 7 8 13 15 16 18 19 19 22 24 27 27 28 LCS_GDT A 21 A 21 4 5 12 0 3 4 4 5 6 6 7 7 10 15 16 18 19 19 22 24 27 27 28 LCS_GDT S 22 S 22 4 5 12 0 3 4 4 5 6 6 7 7 10 12 14 17 18 19 22 24 27 27 28 LCS_GDT L 23 L 23 3 3 11 0 3 3 3 3 4 5 6 9 10 11 14 17 18 19 22 24 27 27 28 LCS_GDT A 24 A 24 3 4 12 3 3 4 6 6 7 9 9 10 11 14 15 18 19 19 22 24 27 27 28 LCS_GDT A 25 A 25 3 4 13 3 3 3 3 6 7 9 9 10 12 14 15 18 19 19 20 24 27 27 28 LCS_GDT N 26 N 26 3 4 13 3 3 3 3 6 6 9 9 10 12 14 15 18 19 19 19 20 20 22 24 LCS_GDT E 27 E 27 3 4 13 1 3 4 4 4 5 5 6 8 11 14 15 18 19 19 19 19 20 21 22 LCS_GDT L 28 L 28 3 4 13 0 3 4 4 4 5 5 6 8 8 9 14 18 19 19 19 19 20 21 22 LCS_GDT R 29 R 29 3 4 13 0 3 4 4 4 5 5 6 10 11 14 15 18 19 19 19 19 20 21 22 LCS_GDT V 30 V 30 3 6 13 1 3 4 5 5 6 7 7 10 10 12 14 18 19 19 19 19 20 21 22 LCS_GDT T 31 T 31 3 6 13 1 3 4 5 5 6 7 7 10 11 14 15 18 19 19 19 19 20 21 22 LCS_GDT E 32 E 32 3 6 14 3 3 3 4 4 5 7 7 10 11 14 15 18 19 19 19 19 20 22 22 LCS_GDT R 33 R 33 4 6 14 3 4 4 5 6 6 9 9 10 12 14 15 18 19 19 19 19 20 23 23 LCS_GDT P 34 P 34 4 6 14 3 4 4 6 6 7 9 10 11 12 14 15 18 19 19 20 20 22 26 26 LCS_GDT F 35 F 35 4 6 14 3 4 4 6 6 7 9 10 11 12 14 15 18 19 19 20 21 25 27 28 LCS_GDT W 36 W 36 4 6 14 3 4 4 5 6 7 9 10 11 12 14 15 18 19 19 22 24 27 27 28 LCS_GDT I 37 I 37 3 6 14 3 3 4 5 6 7 9 10 11 11 14 16 18 19 19 22 24 27 27 28 LCS_GDT S 38 S 38 3 6 14 0 3 4 8 8 9 10 11 12 13 15 16 18 19 19 22 24 27 27 28 LCS_GDT S 39 S 39 5 7 14 4 5 6 8 8 9 10 11 12 13 14 16 18 19 19 22 24 27 27 28 LCS_GDT F 40 F 40 5 7 14 4 5 6 6 7 9 10 11 12 13 15 16 18 19 19 22 24 27 27 28 LCS_GDT I 41 I 41 5 7 14 4 5 6 6 7 7 9 10 11 12 14 15 16 16 16 18 19 22 23 24 LCS_GDT G 42 G 42 5 7 14 4 5 6 6 7 7 9 10 11 12 14 15 16 16 16 18 19 22 23 24 LCS_GDT R 43 R 43 5 7 14 4 5 5 8 8 9 10 11 12 13 15 16 18 19 19 22 24 27 27 28 LCS_GDT S 44 S 44 4 7 14 3 3 6 8 8 9 10 11 12 13 15 16 18 19 19 22 24 27 27 28 LCS_GDT K 45 K 45 4 7 14 3 3 6 6 7 8 9 11 12 13 15 16 18 19 19 22 24 27 27 28 LCS_AVERAGE LCS_A: 15.81 ( 8.11 11.67 27.63 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 6 8 8 9 10 11 12 13 15 16 18 19 19 22 24 27 27 28 GDT PERCENT_AT 9.09 11.36 13.64 18.18 18.18 20.45 22.73 25.00 27.27 29.55 34.09 36.36 40.91 43.18 43.18 50.00 54.55 61.36 61.36 63.64 GDT RMS_LOCAL 0.30 0.41 0.94 1.49 1.49 1.84 2.31 2.64 2.97 3.24 4.32 4.20 4.58 4.87 4.87 5.91 6.30 6.81 6.81 6.99 GDT RMS_ALL_AT 19.96 19.93 18.63 16.91 16.91 16.99 17.15 17.04 16.90 16.77 16.23 15.90 15.73 15.19 15.19 14.77 14.73 14.04 14.04 14.03 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 27 E 27 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 29.083 0 0.256 0.663 29.252 0.000 0.000 - LGA V 3 V 3 29.641 0 0.353 1.341 33.036 0.000 0.000 29.798 LGA Q 4 Q 4 24.689 0 0.214 0.624 26.641 0.000 0.000 26.641 LGA G 5 G 5 20.366 0 0.060 0.060 21.676 0.000 0.000 - LGA P 6 P 6 16.512 0 0.702 0.566 18.735 0.000 0.000 16.280 LGA W 7 W 7 17.434 0 0.424 1.352 17.993 0.000 0.000 14.394 LGA V 8 V 8 18.082 0 0.694 0.691 19.558 0.000 0.000 19.558 LGA G 9 G 9 18.537 0 0.530 0.530 18.864 0.000 0.000 - LGA S 10 S 10 17.158 0 0.662 0.675 18.444 0.000 0.000 18.444 LGA S 11 S 11 10.270 0 0.623 0.759 12.490 0.000 0.000 7.351 LGA Y 12 Y 12 10.041 0 0.632 1.007 16.423 0.000 0.000 16.423 LGA V 13 V 13 9.386 0 0.601 0.620 10.992 0.000 0.000 9.405 LGA A 14 A 14 5.905 0 0.634 0.606 6.950 2.727 2.182 - LGA E 15 E 15 1.156 0 0.649 0.856 8.428 70.000 33.131 8.428 LGA T 16 T 16 0.516 0 0.440 1.301 4.227 86.818 67.013 4.227 LGA G 17 G 17 0.644 0 0.719 0.719 3.563 64.545 64.545 - LGA Q 18 Q 18 2.465 0 0.609 1.067 7.768 63.182 28.283 7.768 LGA N 19 N 19 3.109 0 0.098 0.999 6.180 22.727 11.364 6.180 LGA W 20 W 20 6.114 0 0.152 0.161 10.400 0.455 0.130 10.400 LGA A 21 A 21 7.875 0 0.672 0.637 8.941 0.000 0.000 - LGA S 22 S 22 11.686 0 0.643 0.718 13.949 0.000 0.000 13.785 LGA L 23 L 23 14.301 0 0.645 1.271 16.682 0.000 0.000 16.682 LGA A 24 A 24 14.106 0 0.600 0.567 14.640 0.000 0.000 - LGA A 25 A 25 15.547 0 0.114 0.137 18.193 0.000 0.000 - LGA N 26 N 26 20.974 0 0.578 1.277 23.275 0.000 0.000 23.275 LGA E 27 E 27 23.827 0 0.637 1.105 29.692 0.000 0.000 29.692 LGA L 28 L 28 23.587 0 0.684 1.423 24.770 0.000 0.000 24.309 LGA R 29 R 29 28.568 0 0.638 1.639 29.263 0.000 0.000 24.700 LGA V 30 V 30 30.252 0 0.609 1.021 32.953 0.000 0.000 30.149 LGA T 31 T 31 32.651 0 0.111 1.198 32.917 0.000 0.000 32.339 LGA E 32 E 32 28.275 0 0.581 1.212 29.340 0.000 0.000 26.459 LGA R 33 R 33 27.393 0 0.135 1.344 28.838 0.000 0.000 26.294 LGA P 34 P 34 23.114 0 0.082 0.113 24.630 0.000 0.000 23.408 LGA F 35 F 35 18.974 0 0.269 1.231 20.707 0.000 0.000 20.125 LGA W 36 W 36 12.248 0 0.083 0.789 16.847 0.000 0.000 16.511 LGA I 37 I 37 8.534 0 0.647 1.190 12.035 0.000 0.000 12.035 LGA S 38 S 38 2.896 0 0.675 0.600 4.941 40.909 27.879 4.941 LGA S 39 S 39 2.882 0 0.654 0.765 5.676 33.182 22.121 5.676 LGA F 40 F 40 2.971 0 0.097 1.125 9.547 25.000 10.083 9.547 LGA I 41 I 41 8.568 0 0.058 1.037 13.990 0.000 0.000 13.990 LGA G 42 G 42 9.856 0 0.223 0.223 9.856 0.000 0.000 - LGA R 43 R 43 3.248 0 0.356 1.376 8.709 12.727 15.041 8.709 LGA S 44 S 44 2.428 0 0.052 0.671 5.626 35.455 23.939 5.626 LGA K 45 K 45 4.110 0 0.512 0.946 14.964 21.364 9.495 14.964 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 11.954 11.780 12.178 10.888 7.164 0.208 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 11 2.64 26.136 22.147 0.402 LGA_LOCAL RMSD: 2.639 Number of atoms: 11 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 17.040 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 11.954 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.146258 * X + -0.929685 * Y + 0.338076 * Z + 50.755337 Y_new = 0.554700 * X + -0.205896 * Y + -0.806173 * Z + -2.139766 Z_new = 0.819095 * X + 0.305440 * Y + 0.485583 * Z + -102.867378 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.312994 -0.959831 0.561482 [DEG: 75.2290 -54.9943 32.1706 ] ZXZ: 0.397083 1.063767 1.213869 [DEG: 22.7512 60.9493 69.5496 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS279_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS279_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 11 2.64 22.147 11.95 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS279_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT 2iou_g 1jmz_a ATOM 9 N ALA 2 18.483 50.486 -9.036 1.00297.00 N ATOM 10 CA ALA 2 18.932 50.751 -10.368 1.00297.00 C ATOM 11 C ALA 2 20.379 50.409 -10.411 1.00297.00 C ATOM 12 O ALA 2 20.790 49.349 -9.945 1.00297.00 O ATOM 13 CB ALA 2 18.372 50.583 -11.789 1.00297.00 C ATOM 14 N VAL 3 21.204 51.316 -10.956 1.00297.00 N ATOM 15 CA VAL 3 22.605 51.036 -10.953 1.00297.00 C ATOM 16 C VAL 3 23.183 51.833 -9.837 1.00297.00 C ATOM 17 O VAL 3 24.107 52.621 -10.031 1.00297.00 O ATOM 18 CB VAL 3 23.505 49.860 -11.189 1.00297.00 C ATOM 19 CG1 VAL 3 22.905 49.018 -12.328 1.00297.00 C ATOM 20 CG2 VAL 3 24.929 50.371 -11.460 1.00297.00 C ATOM 21 N GLN 4 22.629 51.655 -8.629 1.00297.00 N ATOM 22 CA GLN 4 23.106 52.388 -7.504 1.00297.00 C ATOM 23 C GLN 4 23.008 51.503 -6.312 1.00297.00 C ATOM 24 O GLN 4 23.032 50.278 -6.426 1.00297.00 O ATOM 25 CB GLN 4 21.881 53.313 -7.563 1.00297.00 C ATOM 26 CG GLN 4 22.016 54.351 -8.678 1.00297.00 C ATOM 27 CD GLN 4 20.701 55.100 -8.833 1.00297.00 C ATOM 28 OE1 GLN 4 19.921 54.816 -9.740 1.00297.00 O ATOM 29 NE2 GLN 4 20.441 56.086 -7.933 1.00297.00 N ATOM 30 N GLY 5 22.916 52.117 -5.119 1.00297.00 N ATOM 31 CA GLY 5 22.878 51.362 -3.906 1.00297.00 C ATOM 32 C GLY 5 21.679 50.484 -3.942 1.00297.00 C ATOM 33 O GLY 5 20.656 50.765 -4.566 1.00297.00 O ATOM 34 N PRO 6 21.853 49.382 -3.284 1.00297.00 N ATOM 35 CA PRO 6 20.807 48.407 -3.171 1.00297.00 C ATOM 36 C PRO 6 19.923 48.718 -2.013 1.00297.00 C ATOM 37 O PRO 6 20.223 49.629 -1.241 1.00297.00 O ATOM 38 CB PRO 6 21.500 47.052 -3.036 1.00297.00 C ATOM 39 CG PRO 6 22.937 47.396 -2.612 1.00297.00 C ATOM 40 CD PRO 6 23.169 48.771 -3.248 1.00297.00 C ATOM 41 N TRP 7 18.802 47.988 -1.893 1.00297.00 N ATOM 42 CA TRP 7 17.991 48.187 -0.739 1.00297.00 C ATOM 43 C TRP 7 18.632 47.363 0.321 1.00297.00 C ATOM 44 O TRP 7 19.167 46.289 0.046 1.00297.00 O ATOM 45 CB TRP 7 16.548 47.670 -0.869 1.00297.00 C ATOM 46 CG TRP 7 16.411 46.163 -0.877 1.00297.00 C ATOM 47 CD1 TRP 7 16.282 45.317 0.185 1.00297.00 C ATOM 48 CD2 TRP 7 16.370 45.341 -2.056 1.00297.00 C ATOM 49 NE1 TRP 7 16.163 44.021 -0.253 1.00297.00 N ATOM 50 CE2 TRP 7 16.216 44.019 -1.632 1.00297.00 C ATOM 51 CE3 TRP 7 16.452 45.661 -3.381 1.00297.00 C ATOM 52 CZ2 TRP 7 16.140 42.993 -2.533 1.00297.00 C ATOM 53 CZ3 TRP 7 16.379 44.625 -4.284 1.00297.00 C ATOM 54 CH2 TRP 7 16.226 43.318 -3.868 1.00297.00 C ATOM 55 N VAL 8 18.620 47.866 1.564 1.00297.00 N ATOM 56 CA VAL 8 19.146 47.102 2.649 1.00297.00 C ATOM 57 C VAL 8 17.934 46.582 3.334 1.00297.00 C ATOM 58 O VAL 8 16.858 47.162 3.191 1.00297.00 O ATOM 59 CB VAL 8 19.932 47.924 3.625 1.00297.00 C ATOM 60 CG1 VAL 8 20.346 47.025 4.805 1.00297.00 C ATOM 61 CG2 VAL 8 21.117 48.561 2.879 1.00297.00 C ATOM 62 N GLY 9 18.036 45.450 4.052 1.00297.00 N ATOM 63 CA GLY 9 16.809 45.025 4.648 1.00297.00 C ATOM 64 C GLY 9 17.071 43.947 5.637 1.00297.00 C ATOM 65 O GLY 9 18.021 43.176 5.514 1.00297.00 O ATOM 66 N SER 10 16.206 43.889 6.664 1.00297.00 N ATOM 67 CA SER 10 16.256 42.846 7.634 1.00297.00 C ATOM 68 C SER 10 14.875 42.287 7.666 1.00297.00 C ATOM 69 O SER 10 13.905 43.023 7.843 1.00297.00 O ATOM 70 CB SER 10 16.586 43.346 9.050 1.00297.00 C ATOM 71 OG SER 10 17.881 43.924 9.059 1.00297.00 O ATOM 72 N SER 11 14.743 40.963 7.476 1.00297.00 N ATOM 73 CA SER 11 13.420 40.412 7.496 1.00297.00 C ATOM 74 C SER 11 13.449 39.314 8.502 1.00297.00 C ATOM 75 O SER 11 14.282 38.412 8.438 1.00297.00 O ATOM 76 CB SER 11 13.017 39.782 6.154 1.00297.00 C ATOM 77 OG SER 11 13.874 38.688 5.863 1.00297.00 O ATOM 78 N TYR 12 12.526 39.364 9.474 1.00 59.43 N ATOM 79 CA TYR 12 12.535 38.342 10.471 1.00 59.43 C ATOM 80 C TYR 12 11.256 37.584 10.354 1.00 59.43 C ATOM 81 O TYR 12 10.178 38.137 10.563 1.00 59.43 O ATOM 82 CB TYR 12 12.625 38.911 11.895 1.00 59.43 C ATOM 83 CG TYR 12 12.466 37.782 12.845 1.00 59.43 C ATOM 84 CD1 TYR 12 13.535 36.982 13.174 1.00 59.43 C ATOM 85 CD2 TYR 12 11.238 37.535 13.409 1.00 59.43 C ATOM 86 CE1 TYR 12 13.375 35.938 14.054 1.00 59.43 C ATOM 87 CE2 TYR 12 11.073 36.494 14.287 1.00 59.43 C ATOM 88 CZ TYR 12 12.142 35.695 14.609 1.00 59.43 C ATOM 89 OH TYR 12 11.973 34.623 15.512 1.00 59.43 O ATOM 90 N VAL 13 11.347 36.284 10.007 1.00297.00 N ATOM 91 CA VAL 13 10.154 35.504 9.872 1.00297.00 C ATOM 92 C VAL 13 10.200 34.422 10.893 1.00297.00 C ATOM 93 O VAL 13 11.143 33.634 10.935 1.00297.00 O ATOM 94 CB VAL 13 10.039 34.838 8.532 1.00297.00 C ATOM 95 CG1 VAL 13 8.759 33.985 8.508 1.00297.00 C ATOM 96 CG2 VAL 13 10.102 35.916 7.438 1.00297.00 C ATOM 97 N ALA 14 9.176 34.364 11.760 1.00 54.98 N ATOM 98 CA ALA 14 9.141 33.306 12.720 1.00 54.98 C ATOM 99 C ALA 14 7.776 32.715 12.626 1.00 54.98 C ATOM 100 O ALA 14 6.781 33.435 12.659 1.00 54.98 O ATOM 101 CB ALA 14 9.344 33.783 14.171 1.00 54.98 C ATOM 102 N GLU 15 7.689 31.379 12.489 1.00297.00 N ATOM 103 CA GLU 15 6.387 30.793 12.393 1.00297.00 C ATOM 104 C GLU 15 5.875 30.601 13.777 1.00297.00 C ATOM 105 O GLU 15 6.658 30.443 14.711 1.00297.00 O ATOM 106 CB GLU 15 6.349 29.402 11.732 1.00297.00 C ATOM 107 CG GLU 15 7.005 28.297 12.567 1.00297.00 C ATOM 108 CD GLU 15 6.556 26.956 11.996 1.00297.00 C ATOM 109 OE1 GLU 15 6.459 26.848 10.744 1.00297.00 O ATOM 110 OE2 GLU 15 6.288 26.027 12.803 1.00297.00 O ATOM 111 N THR 16 4.542 30.686 13.955 1.00297.00 N ATOM 112 CA THR 16 3.968 30.327 15.217 1.00297.00 C ATOM 113 C THR 16 2.844 29.378 14.920 1.00297.00 C ATOM 114 O THR 16 1.670 29.692 15.093 1.00297.00 O ATOM 115 CB THR 16 3.465 31.498 16.033 1.00297.00 C ATOM 116 OG1 THR 16 2.925 31.037 17.264 1.00297.00 O ATOM 117 CG2 THR 16 2.422 32.313 15.250 1.00297.00 C ATOM 118 N GLY 17 3.171 28.154 14.478 1.00297.00 N ATOM 119 CA GLY 17 2.122 27.236 14.152 1.00297.00 C ATOM 120 C GLY 17 1.683 27.559 12.759 1.00297.00 C ATOM 121 O GLY 17 2.120 28.541 12.164 1.00297.00 O ATOM 122 N GLN 18 0.776 26.733 12.210 1.00297.00 N ATOM 123 CA GLN 18 0.322 26.912 10.863 1.00297.00 C ATOM 124 C GLN 18 -0.435 28.194 10.754 1.00297.00 C ATOM 125 O GLN 18 -0.275 28.936 9.787 1.00297.00 O ATOM 126 CB GLN 18 -0.628 25.793 10.414 1.00297.00 C ATOM 127 CG GLN 18 0.026 24.409 10.392 1.00297.00 C ATOM 128 CD GLN 18 -1.051 23.385 10.067 1.00297.00 C ATOM 129 OE1 GLN 18 -0.964 22.666 9.072 1.00297.00 O ATOM 130 NE2 GLN 18 -2.100 23.314 10.930 1.00297.00 N ATOM 131 N ASN 19 -1.263 28.495 11.769 1.00297.00 N ATOM 132 CA ASN 19 -2.156 29.614 11.711 1.00297.00 C ATOM 133 C ASN 19 -1.424 30.905 11.560 1.00297.00 C ATOM 134 O ASN 19 -1.759 31.702 10.684 1.00297.00 O ATOM 135 CB ASN 19 -3.027 29.727 12.974 1.00297.00 C ATOM 136 CG ASN 19 -3.941 28.513 13.015 1.00297.00 C ATOM 137 OD1 ASN 19 -5.161 28.637 12.943 1.00297.00 O ATOM 138 ND2 ASN 19 -3.334 27.301 13.126 1.00297.00 N ATOM 139 N TRP 20 -0.387 31.162 12.375 1.00 29.52 N ATOM 140 CA TRP 20 0.172 32.471 12.231 1.00 29.52 C ATOM 141 C TRP 20 1.660 32.408 12.295 1.00 29.52 C ATOM 142 O TRP 20 2.256 31.400 12.670 1.00 29.52 O ATOM 143 CB TRP 20 -0.262 33.456 13.333 1.00 29.52 C ATOM 144 CG TRP 20 -1.733 33.807 13.357 1.00 29.52 C ATOM 145 CD1 TRP 20 -2.702 33.394 14.226 1.00 29.52 C ATOM 146 CD2 TRP 20 -2.379 34.679 12.416 1.00 29.52 C ATOM 147 NE1 TRP 20 -3.908 33.964 13.891 1.00 29.52 N ATOM 148 CE2 TRP 20 -3.725 34.754 12.778 1.00 29.52 C ATOM 149 CE3 TRP 20 -1.893 35.364 11.338 1.00 29.52 C ATOM 150 CZ2 TRP 20 -4.606 35.516 12.066 1.00 29.52 C ATOM 151 CZ3 TRP 20 -2.784 36.131 10.622 1.00 29.52 C ATOM 152 CH2 TRP 20 -4.115 36.206 10.979 1.00 29.52 C ATOM 153 N ALA 21 2.290 33.520 11.873 1.00 18.22 N ATOM 154 CA ALA 21 3.706 33.698 11.933 1.00 18.22 C ATOM 155 C ALA 21 3.868 35.168 12.044 1.00 18.22 C ATOM 156 O ALA 21 2.930 35.914 11.775 1.00 18.22 O ATOM 157 CB ALA 21 4.454 33.255 10.666 1.00 18.22 C ATOM 158 N SER 22 5.049 35.629 12.484 1.00 21.96 N ATOM 159 CA SER 22 5.229 37.045 12.555 1.00 21.96 C ATOM 160 C SER 22 6.219 37.367 11.491 1.00 21.96 C ATOM 161 O SER 22 7.160 36.605 11.269 1.00 21.96 O ATOM 162 CB SER 22 5.800 37.524 13.899 1.00 21.96 C ATOM 163 OG SER 22 4.891 37.205 14.940 1.00 21.96 O ATOM 164 N LEU 23 6.019 38.488 10.774 1.00 47.32 N ATOM 165 CA LEU 23 6.942 38.806 9.726 1.00 47.32 C ATOM 166 C LEU 23 7.470 40.188 9.965 1.00 47.32 C ATOM 167 O LEU 23 6.694 41.104 10.238 1.00 47.32 O ATOM 168 CB LEU 23 6.299 38.821 8.330 1.00 47.32 C ATOM 169 CG LEU 23 5.668 37.475 7.923 1.00 47.32 C ATOM 170 CD1 LEU 23 6.712 36.346 7.918 1.00 47.32 C ATOM 171 CD2 LEU 23 4.432 37.146 8.776 1.00 47.32 C ATOM 172 N ALA 24 8.810 40.358 9.856 1.00 84.66 N ATOM 173 CA ALA 24 9.435 41.638 10.073 1.00 84.66 C ATOM 174 C ALA 24 10.039 42.111 8.783 1.00 84.66 C ATOM 175 O ALA 24 10.962 41.515 8.232 1.00 84.66 O ATOM 176 CB ALA 24 10.567 41.592 11.114 1.00 84.66 C ATOM 177 N ALA 25 9.440 43.207 8.296 1.00297.00 N ATOM 178 CA ALA 25 9.589 44.003 7.116 1.00297.00 C ATOM 179 C ALA 25 10.760 44.916 6.972 1.00297.00 C ATOM 180 O ALA 25 11.177 45.151 5.843 1.00297.00 O ATOM 181 CB ALA 25 8.393 44.946 7.004 1.00297.00 C ATOM 182 N ASN 26 11.239 45.494 8.088 1.00297.00 N ATOM 183 CA ASN 26 12.063 46.677 8.190 1.00297.00 C ATOM 184 C ASN 26 13.267 46.810 7.311 1.00297.00 C ATOM 185 O ASN 26 14.034 45.870 7.109 1.00297.00 O ATOM 186 CB ASN 26 12.513 46.944 9.636 1.00297.00 C ATOM 187 CG ASN 26 13.268 45.714 10.120 1.00297.00 C ATOM 188 OD1 ASN 26 14.468 45.573 9.890 1.00297.00 O ATOM 189 ND2 ASN 26 12.543 44.797 10.816 1.00297.00 N ATOM 190 N GLU 27 13.403 48.050 6.756 1.00297.00 N ATOM 191 CA GLU 27 14.544 48.561 6.037 1.00297.00 C ATOM 192 C GLU 27 14.154 49.500 4.934 1.00297.00 C ATOM 193 O GLU 27 12.971 49.677 4.645 1.00297.00 O ATOM 194 CB GLU 27 15.551 47.526 5.556 1.00297.00 C ATOM 195 CG GLU 27 16.495 47.117 6.688 1.00297.00 C ATOM 196 CD GLU 27 17.606 48.159 6.765 1.00297.00 C ATOM 197 OE1 GLU 27 17.586 49.119 5.946 1.00297.00 O ATOM 198 OE2 GLU 27 18.497 48.003 7.640 1.00297.00 O ATOM 199 N LEU 28 15.163 50.162 4.320 1.00297.00 N ATOM 200 CA LEU 28 14.916 51.150 3.301 1.00297.00 C ATOM 201 C LEU 28 15.796 50.885 2.115 1.00297.00 C ATOM 202 O LEU 28 16.642 49.990 2.121 1.00297.00 O ATOM 203 CB LEU 28 15.246 52.580 3.748 1.00297.00 C ATOM 204 CG LEU 28 16.755 52.843 3.931 1.00297.00 C ATOM 205 CD1 LEU 28 17.015 54.288 4.387 1.00297.00 C ATOM 206 CD2 LEU 28 17.409 51.797 4.851 1.00297.00 C ATOM 207 N ARG 29 15.597 51.680 1.043 1.00297.00 N ATOM 208 CA ARG 29 16.393 51.545 -0.139 1.00297.00 C ATOM 209 C ARG 29 17.245 52.765 -0.217 1.00297.00 C ATOM 210 O ARG 29 17.099 53.689 0.580 1.00297.00 O ATOM 211 CB ARG 29 15.578 51.486 -1.442 1.00297.00 C ATOM 212 CG ARG 29 14.694 50.245 -1.563 1.00297.00 C ATOM 213 CD ARG 29 13.439 50.290 -0.691 1.00297.00 C ATOM 214 NE ARG 29 12.697 49.020 -0.928 1.00297.00 N ATOM 215 CZ ARG 29 11.890 48.898 -2.021 1.00297.00 C ATOM 216 NH1 ARG 29 11.793 49.925 -2.918 1.00297.00 N ATOM 217 NH2 ARG 29 11.180 47.749 -2.223 1.00297.00 N ATOM 218 N VAL 30 18.194 52.771 -1.170 1.00297.00 N ATOM 219 CA VAL 30 19.061 53.892 -1.398 1.00297.00 C ATOM 220 C VAL 30 18.202 55.027 -1.855 1.00297.00 C ATOM 221 O VAL 30 18.500 56.195 -1.605 1.00297.00 O ATOM 222 CB VAL 30 20.089 53.627 -2.448 1.00297.00 C ATOM 223 CG1 VAL 30 21.021 52.522 -1.923 1.00297.00 C ATOM 224 CG2 VAL 30 19.371 53.281 -3.762 1.00297.00 C ATOM 225 N THR 31 17.096 54.687 -2.539 1.00297.00 N ATOM 226 CA THR 31 16.149 55.637 -3.038 1.00297.00 C ATOM 227 C THR 31 15.621 56.353 -1.839 1.00297.00 C ATOM 228 O THR 31 15.181 57.498 -1.924 1.00297.00 O ATOM 229 CB THR 31 14.989 54.995 -3.741 1.00297.00 C ATOM 230 OG1 THR 31 14.152 55.990 -4.313 1.00297.00 O ATOM 231 CG2 THR 31 14.199 54.139 -2.735 1.00297.00 C ATOM 232 N GLU 32 15.697 55.675 -0.677 1.00297.00 N ATOM 233 CA GLU 32 15.209 56.157 0.581 1.00297.00 C ATOM 234 C GLU 32 13.736 55.941 0.644 1.00297.00 C ATOM 235 O GLU 32 13.057 56.469 1.522 1.00297.00 O ATOM 236 CB GLU 32 15.482 57.654 0.798 1.00297.00 C ATOM 237 CG GLU 32 15.126 58.143 2.202 1.00297.00 C ATOM 238 CD GLU 32 15.446 59.627 2.271 1.00297.00 C ATOM 239 OE1 GLU 32 15.212 60.330 1.251 1.00297.00 O ATOM 240 OE2 GLU 32 15.932 60.079 3.341 1.00297.00 O ATOM 241 N ARG 33 13.200 55.121 -0.275 1.00297.00 N ATOM 242 CA ARG 33 11.826 54.789 -0.120 1.00297.00 C ATOM 243 C ARG 33 11.828 53.688 0.886 1.00297.00 C ATOM 244 O ARG 33 12.802 52.944 1.000 1.00297.00 O ATOM 245 CB ARG 33 11.138 54.305 -1.406 1.00297.00 C ATOM 246 CG ARG 33 9.660 53.979 -1.201 1.00297.00 C ATOM 247 CD ARG 33 8.858 53.992 -2.501 1.00297.00 C ATOM 248 NE ARG 33 7.446 53.648 -2.172 1.00297.00 N ATOM 249 CZ ARG 33 6.948 52.431 -2.536 1.00297.00 C ATOM 250 NH1 ARG 33 7.733 51.546 -3.216 1.00297.00 N ATOM 251 NH2 ARG 33 5.657 52.105 -2.236 1.00297.00 N ATOM 252 N PRO 34 10.783 53.593 1.652 1.00297.00 N ATOM 253 CA PRO 34 10.771 52.584 2.671 1.00297.00 C ATOM 254 C PRO 34 10.610 51.212 2.109 1.00297.00 C ATOM 255 O PRO 34 9.918 51.045 1.106 1.00297.00 O ATOM 256 CB PRO 34 9.673 52.990 3.652 1.00297.00 C ATOM 257 CG PRO 34 9.616 54.523 3.512 1.00297.00 C ATOM 258 CD PRO 34 10.068 54.790 2.067 1.00297.00 C ATOM 259 N PHE 35 11.265 50.219 2.736 1.00297.00 N ATOM 260 CA PHE 35 11.112 48.859 2.326 1.00297.00 C ATOM 261 C PHE 35 10.520 48.164 3.505 1.00297.00 C ATOM 262 O PHE 35 11.238 47.634 4.355 1.00297.00 O ATOM 263 CB PHE 35 12.462 48.184 2.020 1.00297.00 C ATOM 264 CG PHE 35 12.215 46.778 1.598 1.00297.00 C ATOM 265 CD1 PHE 35 12.146 45.769 2.531 1.00297.00 C ATOM 266 CD2 PHE 35 12.046 46.469 0.269 1.00297.00 C ATOM 267 CE1 PHE 35 11.918 44.470 2.146 1.00297.00 C ATOM 268 CE2 PHE 35 11.818 45.173 -0.123 1.00297.00 C ATOM 269 CZ PHE 35 11.753 44.172 0.816 1.00297.00 C ATOM 270 N TRP 36 9.179 48.156 3.602 1.00297.00 N ATOM 271 CA TRP 36 8.623 47.477 4.729 1.00297.00 C ATOM 272 C TRP 36 7.452 46.667 4.289 1.00297.00 C ATOM 273 O TRP 36 6.431 47.210 3.874 1.00297.00 O ATOM 274 CB TRP 36 8.100 48.410 5.838 1.00297.00 C ATOM 275 CG TRP 36 9.155 49.096 6.674 1.00297.00 C ATOM 276 CD1 TRP 36 10.505 49.202 6.498 1.00297.00 C ATOM 277 CD2 TRP 36 8.851 49.772 7.903 1.00297.00 C ATOM 278 NE1 TRP 36 11.061 49.898 7.547 1.00297.00 N ATOM 279 CE2 TRP 36 10.052 50.254 8.420 1.00297.00 C ATOM 280 CE3 TRP 36 7.664 49.966 8.550 1.00297.00 C ATOM 281 CZ2 TRP 36 10.084 50.943 9.600 1.00297.00 C ATOM 282 CZ3 TRP 36 7.699 50.663 9.737 1.00297.00 C ATOM 283 CH2 TRP 36 8.886 51.142 10.251 1.00297.00 C ATOM 284 N ILE 37 7.579 45.327 4.356 1.00297.00 N ATOM 285 CA ILE 37 6.453 44.477 4.112 1.00297.00 C ATOM 286 C ILE 37 6.391 43.544 5.279 1.00297.00 C ATOM 287 O ILE 37 7.359 42.847 5.581 1.00297.00 O ATOM 288 CB ILE 37 6.575 43.666 2.857 1.00297.00 C ATOM 289 CG1 ILE 37 6.639 44.613 1.649 1.00297.00 C ATOM 290 CG2 ILE 37 5.400 42.672 2.809 1.00297.00 C ATOM 291 CD1 ILE 37 5.423 45.532 1.544 1.00297.00 C ATOM 292 N SER 38 5.251 43.512 5.994 1.00297.00 N ATOM 293 CA SER 38 5.240 42.622 7.112 1.00297.00 C ATOM 294 C SER 38 3.846 42.436 7.602 1.00297.00 C ATOM 295 O SER 38 2.932 43.182 7.250 1.00297.00 O ATOM 296 CB SER 38 6.088 43.121 8.296 1.00297.00 C ATOM 297 OG SER 38 5.547 44.327 8.814 1.00297.00 O ATOM 298 N SER 39 3.661 41.382 8.421 1.00297.00 N ATOM 299 CA SER 39 2.385 41.113 9.010 1.00297.00 C ATOM 300 C SER 39 2.636 41.103 10.482 1.00297.00 C ATOM 301 O SER 39 3.467 40.327 10.952 1.00297.00 O ATOM 302 CB SER 39 1.834 39.725 8.646 1.00297.00 C ATOM 303 OG SER 39 1.704 39.604 7.237 1.00297.00 O ATOM 304 N PHE 40 1.933 41.995 11.214 1.00297.00 N ATOM 305 CA PHE 40 2.023 42.175 12.639 1.00297.00 C ATOM 306 C PHE 40 1.238 41.080 13.277 1.00297.00 C ATOM 307 O PHE 40 1.679 40.465 14.247 1.00297.00 O ATOM 308 CB PHE 40 1.838 42.059 11.110 1.00297.00 C ATOM 309 CG PHE 40 2.239 43.349 10.474 1.00297.00 C ATOM 310 CD1 PHE 40 1.311 44.354 10.328 1.00297.00 C ATOM 311 CD2 PHE 40 3.522 43.567 10.029 1.00297.00 C ATOM 312 CE1 PHE 40 1.649 45.550 9.744 1.00297.00 C ATOM 313 CE2 PHE 40 3.868 44.762 9.445 1.00297.00 C ATOM 314 CZ PHE 40 2.930 45.757 9.301 1.00297.00 C ATOM 315 N ILE 41 0.029 40.818 12.744 1.00297.00 N ATOM 316 CA ILE 41 -0.796 39.782 13.290 1.00297.00 C ATOM 317 C ILE 41 0.027 38.542 13.387 1.00297.00 C ATOM 318 O ILE 41 0.455 37.983 12.379 1.00297.00 O ATOM 319 CB ILE 41 -2.201 39.349 12.983 1.00297.00 C ATOM 320 CG1 ILE 41 -2.807 38.635 14.206 1.00297.00 C ATOM 321 CG2 ILE 41 -2.187 38.505 11.696 1.00297.00 C ATOM 322 CD1 ILE 41 -4.312 38.393 14.105 1.00297.00 C ATOM 323 N GLY 42 0.291 38.103 14.632 1.00297.00 N ATOM 324 CA GLY 42 1.043 36.903 14.829 1.00297.00 C ATOM 325 C GLY 42 2.486 37.286 14.822 1.00297.00 C ATOM 326 O GLY 42 3.336 36.549 14.322 1.00297.00 O ATOM 327 N ARG 43 2.795 38.468 15.382 1.00297.00 N ATOM 328 CA ARG 43 4.154 38.907 15.451 1.00297.00 C ATOM 329 C ARG 43 4.862 37.958 16.354 1.00297.00 C ATOM 330 O ARG 43 5.264 38.320 17.458 1.00297.00 O ATOM 331 CB ARG 43 5.159 39.429 14.409 1.00297.00 C ATOM 332 CG ARG 43 4.478 40.220 13.291 1.00297.00 C ATOM 333 CD ARG 43 5.410 40.615 12.144 1.00297.00 C ATOM 334 NE ARG 43 4.563 41.221 11.075 1.00297.00 N ATOM 335 CZ ARG 43 4.257 42.550 11.112 1.00297.00 C ATOM 336 NH1 ARG 43 4.728 43.332 12.129 1.00297.00 N ATOM 337 NH2 ARG 43 3.478 43.099 10.135 1.00297.00 N ATOM 338 N SER 44 5.019 36.697 15.910 1.00182.02 N ATOM 339 CA SER 44 5.657 35.732 16.748 1.00182.02 C ATOM 340 C SER 44 7.124 35.816 16.502 1.00182.02 C ATOM 341 O SER 44 7.572 35.869 15.360 1.00182.02 O ATOM 342 CB SER 44 5.288 34.240 16.805 1.00182.02 C ATOM 343 OG SER 44 5.976 33.607 17.872 1.00182.02 O ATOM 344 N LYS 45 7.910 35.860 17.594 1.00 22.50 N ATOM 345 CA LYS 45 9.332 35.932 17.451 1.00 22.50 C ATOM 346 C LYS 45 9.844 34.561 17.733 1.00 22.50 C ATOM 347 O LYS 45 10.929 34.396 18.294 1.00 22.50 O ATOM 348 CB LYS 45 9.806 36.289 16.034 1.00 22.50 C ATOM 349 CG LYS 45 9.422 37.700 15.573 1.00 22.50 C ATOM 350 CD LYS 45 10.201 38.809 16.285 1.00 22.50 C ATOM 351 CE LYS 45 10.000 40.201 15.677 1.00 22.50 C ATOM 352 NZ LYS 45 10.878 41.180 16.357 1.00 22.50 N TER 1816 LEU 249 END