####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS309_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS309_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 44 2 - 45 4.51 4.51 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 10 - 31 1.92 5.60 LCS_AVERAGE: 35.69 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 0.54 5.87 LCS_AVERAGE: 16.68 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 44 0 3 3 5 13 18 24 27 31 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT V 3 V 3 3 8 44 3 5 7 11 12 19 24 28 31 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT Q 4 Q 4 3 8 44 3 5 6 11 17 23 28 32 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT G 5 G 5 4 8 44 3 5 11 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT P 6 P 6 4 8 44 3 3 4 7 14 20 28 32 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT W 7 W 7 4 8 44 3 4 4 7 13 15 25 31 33 36 39 40 41 42 42 43 43 43 43 43 LCS_GDT V 8 V 8 4 10 44 3 4 6 7 18 24 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT G 9 G 9 9 11 44 8 11 13 15 17 22 28 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 10 S 10 9 22 44 8 9 12 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 11 S 11 9 22 44 8 9 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT Y 12 Y 12 9 22 44 8 9 13 16 21 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT V 13 V 13 9 22 44 8 9 10 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT A 14 A 14 9 22 44 8 9 10 11 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT E 15 E 15 9 22 44 8 9 10 14 20 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT T 16 T 16 9 22 44 8 9 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT G 17 G 17 9 22 44 4 9 10 17 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT Q 18 Q 18 3 22 44 3 3 3 10 16 23 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT N 19 N 19 3 22 44 3 3 6 7 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT W 20 W 20 12 22 44 10 12 13 15 20 23 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT A 21 A 21 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 22 S 22 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT L 23 L 23 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT A 24 A 24 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT A 25 A 25 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT N 26 N 26 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT E 27 E 27 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT L 28 L 28 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT R 29 R 29 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT V 30 V 30 12 22 44 6 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT T 31 T 31 12 22 44 7 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT E 32 E 32 3 14 44 3 3 3 5 8 14 24 26 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT R 33 R 33 3 14 44 2 3 3 11 16 22 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT P 34 P 34 3 7 44 1 3 3 5 7 13 16 22 26 29 34 38 41 42 42 43 43 43 43 43 LCS_GDT F 35 F 35 3 7 44 3 3 13 15 20 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT W 36 W 36 6 10 44 4 5 7 14 20 24 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT I 37 I 37 6 10 44 4 5 8 14 20 24 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 38 S 38 6 10 44 4 5 7 15 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 39 S 39 6 10 44 4 5 9 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT F 40 F 40 6 10 44 4 5 7 11 11 21 28 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT I 41 I 41 6 10 44 4 5 11 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT G 42 G 42 5 10 44 4 5 6 11 11 11 14 28 31 35 39 40 41 42 42 43 43 43 43 43 LCS_GDT R 43 R 43 5 10 44 4 5 7 11 11 11 14 17 21 28 33 40 41 42 42 43 43 43 43 43 LCS_GDT S 44 S 44 5 10 44 3 4 6 11 11 11 14 15 17 21 25 29 32 36 40 43 43 43 43 43 LCS_GDT K 45 K 45 4 10 44 0 0 4 11 11 11 12 14 15 18 19 23 24 28 31 34 38 41 41 43 LCS_AVERAGE LCS_A: 50.79 ( 16.68 35.69 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 GDT PERCENT_AT 22.73 27.27 29.55 40.91 50.00 56.82 65.91 75.00 79.55 86.36 88.64 90.91 93.18 95.45 95.45 97.73 97.73 97.73 97.73 97.73 GDT RMS_LOCAL 0.40 0.54 0.62 1.51 1.72 1.91 2.26 2.53 2.73 3.05 3.15 3.30 3.53 3.67 3.67 3.99 3.99 3.99 3.99 3.99 GDT RMS_ALL_AT 5.76 5.87 5.90 4.83 4.96 5.05 5.17 5.15 4.97 4.81 4.80 4.71 4.62 4.62 4.62 4.54 4.54 4.54 4.54 4.54 # Checking swapping # possible swapping detected: E 15 E 15 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 7.387 0 0.386 0.395 8.352 0.000 0.000 - LGA V 3 V 3 5.900 0 0.235 1.057 6.153 0.000 0.000 6.058 LGA Q 4 Q 4 4.831 0 0.042 0.220 8.629 11.818 5.253 7.088 LGA G 5 G 5 2.919 0 0.261 0.261 6.197 11.818 11.818 - LGA P 6 P 6 5.874 0 0.083 0.152 7.511 0.000 0.000 7.511 LGA W 7 W 7 6.758 0 0.195 1.259 12.534 0.455 0.130 12.389 LGA V 8 V 8 3.889 0 0.417 1.042 6.577 25.455 16.883 3.980 LGA G 9 G 9 4.216 0 0.555 0.555 4.216 15.000 15.000 - LGA S 10 S 10 2.020 0 0.111 0.102 2.540 53.182 48.485 1.869 LGA S 11 S 11 1.494 0 0.128 0.839 3.072 65.909 51.515 3.072 LGA Y 12 Y 12 2.280 0 0.069 0.824 10.359 48.182 17.576 10.359 LGA V 13 V 13 2.154 0 0.080 1.100 6.385 44.545 30.909 6.385 LGA A 14 A 14 2.854 0 0.075 0.090 3.868 29.091 26.909 - LGA E 15 E 15 3.008 0 0.054 1.197 4.787 25.455 17.172 3.980 LGA T 16 T 16 1.239 0 0.085 0.209 1.931 61.818 65.974 0.824 LGA G 17 G 17 1.806 0 0.635 0.635 2.986 48.636 48.636 - LGA Q 18 Q 18 3.465 0 0.611 0.467 7.947 18.636 8.283 7.947 LGA N 19 N 19 2.833 0 0.446 1.375 9.059 38.636 19.545 6.805 LGA W 20 W 20 3.133 0 0.494 1.144 10.736 40.000 11.429 10.736 LGA A 21 A 21 1.352 0 0.033 0.052 1.840 61.818 62.545 - LGA S 22 S 22 1.237 0 0.034 0.598 1.763 65.455 60.606 1.763 LGA L 23 L 23 1.659 0 0.073 1.406 6.249 58.182 34.773 4.221 LGA A 24 A 24 1.631 0 0.041 0.059 1.829 58.182 56.727 - LGA A 25 A 25 0.670 0 0.025 0.037 1.207 77.727 82.182 - LGA N 26 N 26 0.666 0 0.019 0.488 1.225 77.727 75.682 1.214 LGA E 27 E 27 1.128 0 0.153 1.444 6.513 62.727 37.374 6.513 LGA L 28 L 28 1.508 0 0.107 1.406 5.564 51.364 32.955 5.564 LGA R 29 R 29 1.402 0 0.033 1.914 11.473 65.455 27.769 11.473 LGA V 30 V 30 1.074 0 0.237 1.098 2.584 73.636 62.597 2.584 LGA T 31 T 31 1.457 0 0.704 0.779 5.436 45.000 29.870 3.299 LGA E 32 E 32 5.578 0 0.456 1.126 9.924 5.455 2.424 8.977 LGA R 33 R 33 3.949 0 0.158 0.989 8.007 4.091 6.281 5.703 LGA P 34 P 34 6.911 0 0.656 0.612 8.336 0.000 0.000 8.336 LGA F 35 F 35 3.040 0 0.619 1.163 9.960 19.545 8.099 9.960 LGA W 36 W 36 3.669 0 0.599 0.612 8.771 26.364 7.532 8.702 LGA I 37 I 37 3.643 0 0.090 0.881 7.012 30.000 15.227 7.012 LGA S 38 S 38 2.756 0 0.101 0.569 6.263 25.909 17.576 6.263 LGA S 39 S 39 2.649 0 0.211 0.738 4.946 28.182 25.152 3.989 LGA F 40 F 40 3.481 0 0.201 0.337 10.570 19.545 7.603 10.346 LGA I 41 I 41 2.246 0 0.070 0.588 5.857 26.364 17.955 5.475 LGA G 42 G 42 8.527 0 0.144 0.144 11.586 0.000 0.000 - LGA R 43 R 43 10.480 0 0.263 1.387 14.106 0.000 0.000 14.106 LGA S 44 S 44 13.605 0 0.486 0.841 16.357 0.000 0.000 15.116 LGA K 45 K 45 17.835 0 0.583 0.812 19.918 0.000 0.000 19.593 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 4.508 4.554 6.082 32.304 24.237 10.026 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 33 2.53 60.227 56.700 1.255 LGA_LOCAL RMSD: 2.530 Number of atoms: 33 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.154 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 4.508 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.673300 * X + -0.551107 * Y + -0.492898 * Z + 38.807270 Y_new = 0.358485 * X + -0.339717 * Y + 0.869529 * Z + -24.509289 Z_new = -0.646649 * X + -0.762151 * Y + -0.031168 * Z + 94.888695 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.489254 0.703183 -1.611669 [DEG: 28.0322 40.2894 -92.3418 ] ZXZ: -2.625900 1.601970 -2.437997 [DEG: -150.4530 91.7861 -139.6870 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS309_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS309_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 33 2.53 56.700 4.51 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS309_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 17 N ALA 2 9.181 42.026 11.761 1.00 23.68 ATOM 19 CA ALA 2 9.047 42.933 10.615 1.00 24.34 ATOM 21 CB ALA 2 8.876 44.383 11.099 1.00 28.17 ATOM 25 C ALA 2 9.893 42.685 9.354 1.00 23.91 ATOM 26 O ALA 2 10.864 43.395 9.136 1.00 25.58 ATOM 27 N VAL 3 9.602 41.619 8.590 1.00 23.22 ATOM 29 CA VAL 3 10.504 41.028 7.559 1.00 24.76 ATOM 31 CB VAL 3 10.848 39.569 7.873 1.00 23.11 ATOM 33 CG1 VAL 3 11.534 39.413 9.232 1.00 19.73 ATOM 37 CG2 VAL 3 9.657 38.618 7.762 1.00 22.82 ATOM 41 C VAL 3 9.983 41.279 6.137 1.00 29.23 ATOM 42 O VAL 3 9.174 42.172 5.947 1.00 31.53 ATOM 43 N GLN 4 10.440 40.568 5.102 1.00 32.50 ATOM 45 CA GLN 4 9.964 40.759 3.714 1.00 40.00 ATOM 47 CB GLN 4 11.141 40.778 2.733 1.00 46.49 ATOM 50 CG GLN 4 12.205 41.838 3.068 1.00 45.95 ATOM 53 CD GLN 4 13.562 41.500 2.474 1.00 45.54 ATOM 54 OE1 GLN 4 13.961 40.344 2.438 1.00 42.55 ATOM 55 NE2 GLN 4 14.330 42.476 2.062 1.00 50.58 ATOM 58 C GLN 4 8.965 39.666 3.300 1.00 40.49 ATOM 59 O GLN 4 9.063 38.527 3.765 1.00 37.96 ATOM 60 N GLY 5 8.034 40.033 2.406 1.00 45.23 ATOM 62 CA GLY 5 6.954 39.185 1.875 1.00 45.95 ATOM 65 C GLY 5 5.554 39.602 2.368 1.00 39.69 ATOM 66 O GLY 5 5.259 39.365 3.535 1.00 34.86 ATOM 67 N PRO 6 4.686 40.234 1.550 1.00 40.24 ATOM 68 CD PRO 6 4.874 40.512 0.134 1.00 48.16 ATOM 71 CG PRO 6 3.542 41.075 -0.356 1.00 49.59 ATOM 74 CB PRO 6 2.982 41.772 0.883 1.00 47.03 ATOM 77 CA PRO 6 3.466 40.894 2.042 1.00 38.69 ATOM 79 C PRO 6 2.352 39.967 2.550 1.00 40.65 ATOM 80 O PRO 6 1.601 40.368 3.432 1.00 42.19 ATOM 81 N TRP 7 2.250 38.728 2.064 1.00 42.37 ATOM 83 CA TRP 7 1.458 37.693 2.735 1.00 39.77 ATOM 85 CB TRP 7 1.120 36.563 1.743 1.00 45.74 ATOM 88 CG TRP 7 0.463 35.347 2.334 1.00 42.19 ATOM 89 CD1 TRP 7 1.114 34.245 2.772 1.00 43.85 ATOM 91 NE1 TRP 7 0.213 33.334 3.289 1.00 42.82 ATOM 93 CE2 TRP 7 -1.078 33.810 3.210 1.00 41.75 ATOM 94 CZ2 TRP 7 -2.316 33.282 3.611 1.00 44.73 ATOM 96 CH2 TRP 7 -3.481 34.037 3.395 1.00 48.27 ATOM 98 CZ3 TRP 7 -3.393 35.305 2.790 1.00 48.04 ATOM 100 CE3 TRP 7 -2.144 35.827 2.400 1.00 46.70 ATOM 102 CD2 TRP 7 -0.954 35.092 2.595 1.00 41.75 ATOM 103 C TRP 7 2.260 37.184 3.933 1.00 34.68 ATOM 104 O TRP 7 3.128 36.328 3.769 1.00 38.47 ATOM 105 N VAL 8 1.960 37.731 5.118 1.00 30.38 ATOM 107 CA VAL 8 1.964 37.053 6.434 1.00 26.88 ATOM 109 CB VAL 8 0.496 36.770 6.851 1.00 28.28 ATOM 111 CG1 VAL 8 -0.346 36.087 5.765 1.00 31.83 ATOM 115 CG2 VAL 8 0.274 36.008 8.160 1.00 26.22 ATOM 119 C VAL 8 2.916 35.860 6.571 1.00 26.81 ATOM 120 O VAL 8 2.534 34.748 6.918 1.00 26.18 ATOM 121 N GLY 9 4.196 36.145 6.333 1.00 28.49 ATOM 123 CA GLY 9 5.371 35.359 6.702 1.00 28.09 ATOM 126 C GLY 9 5.144 33.879 6.652 1.00 29.15 ATOM 127 O GLY 9 5.108 33.292 7.713 1.00 26.96 ATOM 128 N SER 10 5.030 33.300 5.462 1.00 34.21 ATOM 130 CA SER 10 4.833 31.856 5.282 1.00 37.89 ATOM 132 CB SER 10 5.184 31.472 3.840 1.00 46.59 ATOM 135 OG SER 10 6.469 31.972 3.490 1.00 44.43 ATOM 137 C SER 10 5.636 30.985 6.256 1.00 36.38 ATOM 138 O SER 10 5.088 30.065 6.860 1.00 37.61 ATOM 139 N SER 11 6.908 31.337 6.494 1.00 33.47 ATOM 141 CA SER 11 7.660 30.796 7.624 1.00 31.68 ATOM 143 CB SER 11 9.132 31.143 7.594 1.00 29.10 ATOM 146 OG SER 11 9.586 31.754 6.389 1.00 29.32 ATOM 148 C SER 11 7.005 31.049 8.995 1.00 28.73 ATOM 149 O SER 11 6.551 30.087 9.588 1.00 30.71 ATOM 150 N TYR 12 6.864 32.294 9.465 1.00 24.73 ATOM 152 CA TYR 12 6.247 32.647 10.758 1.00 22.90 ATOM 154 CB TYR 12 6.108 34.168 10.821 1.00 20.70 ATOM 157 CG TYR 12 5.359 34.692 12.015 1.00 21.78 ATOM 158 CD1 TYR 12 5.604 34.156 13.291 1.00 25.04 ATOM 160 CE1 TYR 12 4.889 34.625 14.398 1.00 26.88 ATOM 162 CZ TYR 12 3.932 35.634 14.222 1.00 24.70 ATOM 163 OH TYR 12 3.164 36.039 15.244 1.00 26.49 ATOM 165 CE2 TYR 12 3.720 36.205 12.958 1.00 21.62 ATOM 167 CD2 TYR 12 4.412 35.717 11.843 1.00 20.47 ATOM 169 C TYR 12 4.905 31.925 11.035 1.00 23.77 ATOM 170 O TYR 12 4.662 31.422 12.138 1.00 26.67 ATOM 171 N VAL 13 4.039 31.807 10.027 1.00 24.28 ATOM 173 CA VAL 13 2.795 31.050 10.164 1.00 24.52 ATOM 175 CB VAL 13 1.761 31.399 9.095 1.00 25.65 ATOM 177 CG1 VAL 13 1.267 32.829 9.277 1.00 24.52 ATOM 181 CG2 VAL 13 2.215 31.220 7.647 1.00 29.27 ATOM 185 C VAL 13 2.991 29.536 10.187 1.00 27.97 ATOM 186 O VAL 13 2.258 28.867 10.903 1.00 28.05 ATOM 187 N ALA 14 3.963 28.965 9.467 1.00 32.55 ATOM 189 CA ALA 14 4.310 27.560 9.666 1.00 38.32 ATOM 191 CB ALA 14 5.347 27.131 8.620 1.00 46.27 ATOM 195 C ALA 14 4.764 27.284 11.115 1.00 39.69 ATOM 196 O ALA 14 4.184 26.433 11.796 1.00 42.64 ATOM 197 N GLU 15 5.762 28.052 11.561 1.00 38.47 ATOM 199 CA GLU 15 6.410 28.053 12.880 1.00 40.98 ATOM 201 CB GLU 15 7.245 29.328 13.011 1.00 34.93 ATOM 204 CG GLU 15 8.377 29.371 12.008 1.00 33.58 ATOM 207 CD GLU 15 9.074 30.721 12.038 1.00 27.81 ATOM 208 OE1 GLU 15 9.523 31.094 13.143 1.00 27.97 ATOM 209 OE2 GLU 15 9.206 31.388 10.983 1.00 25.58 ATOM 210 C GLU 15 5.404 28.074 14.030 1.00 40.90 ATOM 211 O GLU 15 5.524 27.286 14.967 1.00 48.86 ATOM 212 N THR 16 4.427 28.987 13.942 1.00 37.75 ATOM 214 CA THR 16 3.369 29.144 14.949 1.00 42.91 ATOM 216 CB THR 16 2.783 30.566 14.976 1.00 38.99 ATOM 218 CG2 THR 16 3.787 31.582 15.508 1.00 40.90 ATOM 222 OG1 THR 16 2.402 31.012 13.697 1.00 31.48 ATOM 224 C THR 16 2.240 28.118 14.799 1.00 42.01 ATOM 225 O THR 16 1.649 27.721 15.806 1.00 48.04 ATOM 226 N GLY 17 1.955 27.627 13.584 1.00 38.92 ATOM 228 CA GLY 17 0.993 26.549 13.346 1.00 43.85 ATOM 231 C GLY 17 0.001 26.783 12.198 1.00 39.22 ATOM 232 O GLY 17 -0.308 27.899 11.796 1.00 33.47 ATOM 233 N GLN 18 -0.568 25.682 11.693 1.00 43.85 ATOM 235 CA GLN 18 -1.160 25.602 10.345 1.00 40.49 ATOM 237 CB GLN 18 -1.058 24.162 9.796 1.00 47.03 ATOM 240 CG GLN 18 0.294 23.449 10.035 1.00 47.93 ATOM 243 CD GLN 18 1.526 24.352 9.915 1.00 43.94 ATOM 244 OE1 GLN 18 1.694 25.101 8.967 1.00 44.14 ATOM 245 NE2 GLN 18 2.381 24.351 10.916 1.00 45.64 ATOM 248 C GLN 18 -2.573 26.221 10.175 1.00 42.46 ATOM 249 O GLN 18 -3.221 26.001 9.158 1.00 48.39 ATOM 250 N ASN 19 -3.054 27.036 11.122 1.00 42.64 ATOM 252 CA ASN 19 -4.239 27.903 10.967 1.00 41.75 ATOM 254 CB ASN 19 -5.134 27.765 12.216 1.00 46.06 ATOM 257 CG ASN 19 -6.463 28.500 12.091 1.00 44.63 ATOM 258 OD1 ASN 19 -6.904 28.887 11.023 1.00 47.48 ATOM 259 ND2 ASN 19 -7.169 28.695 13.181 1.00 50.46 ATOM 262 C ASN 19 -3.771 29.350 10.674 1.00 38.32 ATOM 263 O ASN 19 -4.071 30.310 11.393 1.00 36.18 ATOM 264 N TRP 20 -2.912 29.428 9.652 1.00 40.73 ATOM 266 CA TRP 20 -1.807 30.373 9.487 1.00 36.38 ATOM 268 CB TRP 20 -1.389 30.347 8.000 1.00 39.69 ATOM 271 CG TRP 20 -0.589 29.163 7.523 1.00 38.32 ATOM 272 CD1 TRP 20 0.105 28.294 8.299 1.00 34.62 ATOM 274 NE1 TRP 20 0.737 27.357 7.508 1.00 39.38 ATOM 276 CE2 TRP 20 0.530 27.598 6.170 1.00 41.84 ATOM 277 CZ2 TRP 20 0.974 26.959 5.001 1.00 47.36 ATOM 279 CH2 TRP 20 0.600 27.486 3.753 1.00 48.62 ATOM 281 CZ3 TRP 20 -0.211 28.633 3.692 1.00 48.27 ATOM 283 CE3 TRP 20 -0.662 29.255 4.872 1.00 44.33 ATOM 285 CD2 TRP 20 -0.310 28.752 6.145 1.00 40.73 ATOM 286 C TRP 20 -2.008 31.788 10.040 1.00 33.81 ATOM 287 O TRP 20 -1.567 32.100 11.145 1.00 28.77 ATOM 288 N ALA 21 -2.621 32.663 9.248 1.00 37.82 ATOM 290 CA ALA 21 -2.513 34.099 9.460 1.00 34.74 ATOM 292 CB ALA 21 -2.992 34.765 8.167 1.00 40.08 ATOM 296 C ALA 21 -3.247 34.594 10.722 1.00 32.50 ATOM 297 O ALA 21 -2.762 35.484 11.424 1.00 28.57 ATOM 298 N SER 22 -4.407 33.998 11.018 1.00 36.05 ATOM 300 CA SER 22 -5.197 34.247 12.227 1.00 38.32 ATOM 302 CB SER 22 -6.542 33.516 12.127 1.00 45.54 ATOM 305 OG SER 22 -7.181 33.811 10.899 1.00 48.86 ATOM 307 C SER 22 -4.482 33.760 13.492 1.00 38.92 ATOM 308 O SER 22 -4.412 34.492 14.480 1.00 39.22 ATOM 309 N LEU 23 -3.908 32.546 13.456 1.00 37.61 ATOM 311 CA LEU 23 -3.147 32.005 14.585 1.00 38.25 ATOM 313 CB LEU 23 -2.776 30.542 14.289 1.00 36.58 ATOM 316 CG LEU 23 -2.127 29.794 15.470 1.00 40.82 ATOM 318 CD1 LEU 23 -3.110 29.575 16.624 1.00 50.46 ATOM 322 CD2 LEU 23 -1.662 28.421 14.990 1.00 43.75 ATOM 326 C LEU 23 -1.904 32.839 14.910 1.00 33.25 ATOM 327 O LEU 23 -1.697 33.168 16.075 1.00 35.99 ATOM 328 N ALA 24 -1.134 33.228 13.889 1.00 28.28 ATOM 330 CA ALA 24 -0.013 34.148 14.043 1.00 26.08 ATOM 332 CB ALA 24 0.671 34.293 12.686 1.00 22.82 ATOM 336 C ALA 24 -0.469 35.502 14.625 1.00 25.36 ATOM 337 O ALA 24 0.141 36.009 15.558 1.00 26.05 ATOM 338 N ALA 25 -1.574 36.081 14.138 1.00 25.48 ATOM 340 CA ALA 25 -2.071 37.362 14.655 1.00 25.01 ATOM 342 CB ALA 25 -3.290 37.781 13.818 1.00 26.85 ATOM 346 C ALA 25 -2.390 37.331 16.157 1.00 27.06 ATOM 347 O ALA 25 -2.009 38.239 16.914 1.00 26.96 ATOM 348 N ASN 26 -3.057 36.254 16.574 1.00 31.43 ATOM 350 CA ASN 26 -3.408 36.069 17.971 1.00 36.18 ATOM 352 CB ASN 26 -4.516 35.003 18.076 1.00 44.04 ATOM 355 CG ASN 26 -5.894 35.606 17.817 1.00 43.47 ATOM 356 OD1 ASN 26 -6.123 36.345 16.877 1.00 40.98 ATOM 357 ND2 ASN 26 -6.835 35.385 18.708 1.00 49.71 ATOM 360 C ASN 26 -2.179 35.791 18.856 1.00 39.22 ATOM 361 O ASN 26 -2.132 36.323 19.967 1.00 43.19 ATOM 362 N GLU 27 -1.201 35.015 18.371 1.00 39.53 ATOM 364 CA GLU 27 0.064 34.680 19.053 1.00 42.19 ATOM 366 CB GLU 27 0.819 33.601 18.248 1.00 42.46 ATOM 369 CG GLU 27 2.188 33.177 18.828 1.00 48.04 ATOM 372 CD GLU 27 3.382 34.073 18.433 1.00 41.15 ATOM 373 OE1 GLU 27 4.328 34.212 19.241 1.00 47.48 ATOM 374 OE2 GLU 27 3.416 34.568 17.286 1.00 35.17 ATOM 375 C GLU 27 0.957 35.901 19.283 1.00 38.99 ATOM 376 O GLU 27 1.322 36.161 20.429 1.00 46.70 ATOM 377 N LEU 28 1.204 36.714 18.245 1.00 34.39 ATOM 379 CA LEU 28 1.861 38.016 18.395 1.00 37.82 ATOM 381 CB LEU 28 2.088 38.693 17.032 1.00 33.53 ATOM 384 CG LEU 28 2.880 40.019 17.042 1.00 40.73 ATOM 386 CD1 LEU 28 4.212 39.953 17.794 1.00 46.38 ATOM 390 CD2 LEU 28 3.185 40.449 15.604 1.00 37.33 ATOM 394 C LEU 28 1.103 38.952 19.359 1.00 40.82 ATOM 395 O LEU 28 1.641 39.967 19.805 1.00 48.27 ATOM 396 N ARG 29 -0.168 38.638 19.656 1.00 37.61 ATOM 398 CA ARG 29 -1.159 39.567 20.193 1.00 37.68 ATOM 400 CB ARG 29 -1.071 39.576 21.734 1.00 45.23 ATOM 403 CG ARG 29 -2.146 40.375 22.499 1.00 48.86 ATOM 406 CD ARG 29 -3.546 40.417 21.863 1.00 47.59 ATOM 409 NE ARG 29 -4.016 39.089 21.440 1.00 45.03 ATOM 411 CZ ARG 29 -5.099 38.851 20.726 1.00 43.47 ATOM 412 NH1 ARG 29 -5.321 37.656 20.284 1.00 44.33 ATOM 415 NH2 ARG 29 -5.982 39.760 20.447 1.00 45.33 ATOM 418 C ARG 29 -1.123 40.926 19.488 1.00 40.73 ATOM 419 O ARG 29 -1.304 41.975 20.110 1.00 48.51 ATOM 420 N VAL 30 -1.039 40.895 18.150 1.00 38.18 ATOM 422 CA VAL 30 -1.773 41.932 17.412 1.00 42.19 ATOM 424 CB VAL 30 -1.339 42.089 15.944 1.00 39.77 ATOM 426 CG1 VAL 30 0.070 42.682 15.840 1.00 44.83 ATOM 430 CG2 VAL 30 -1.401 40.795 15.144 1.00 31.68 ATOM 434 C VAL 30 -3.280 41.663 17.602 1.00 40.24 ATOM 435 O VAL 30 -3.685 40.651 18.180 1.00 36.65 ATOM 436 N THR 31 -4.156 42.562 17.154 1.00 42.73 ATOM 438 CA THR 31 -5.588 42.225 17.047 1.00 39.85 ATOM 440 CB THR 31 -6.405 43.412 16.500 1.00 42.73 ATOM 442 CG2 THR 31 -7.824 43.486 17.066 1.00 49.71 ATOM 446 OG1 THR 31 -5.810 44.663 16.767 1.00 48.98 ATOM 448 C THR 31 -5.805 41.015 16.124 1.00 32.60 ATOM 449 O THR 31 -4.926 40.703 15.325 1.00 29.58 ATOM 450 N GLU 32 -7.006 40.424 16.177 1.00 34.39 ATOM 452 CA GLU 32 -7.631 39.354 15.364 1.00 36.78 ATOM 454 CB GLU 32 -9.034 39.068 15.963 1.00 44.23 ATOM 457 CG GLU 32 -9.096 38.229 17.248 1.00 46.70 ATOM 460 CD GLU 32 -8.355 38.809 18.458 1.00 44.14 ATOM 461 OE1 GLU 32 -7.869 38.006 19.284 1.00 45.43 ATOM 462 OE2 GLU 32 -8.218 40.049 18.586 1.00 47.36 ATOM 463 C GLU 32 -7.738 39.637 13.835 1.00 38.47 ATOM 464 O GLU 32 -8.791 39.487 13.209 1.00 45.03 ATOM 465 N ARG 33 -6.676 40.143 13.210 1.00 35.23 ATOM 467 CA ARG 33 -6.620 40.751 11.885 1.00 40.41 ATOM 469 CB ARG 33 -6.678 42.290 11.996 1.00 42.55 ATOM 472 CG ARG 33 -7.821 42.859 12.865 1.00 43.28 ATOM 475 CD ARG 33 -9.241 42.576 12.353 1.00 47.03 ATOM 478 NE ARG 33 -10.258 42.948 13.364 1.00 46.59 ATOM 480 CZ ARG 33 -11.098 42.147 14.008 1.00 45.54 ATOM 481 NH1 ARG 33 -11.978 42.659 14.823 1.00 51.49 ATOM 484 NH2 ARG 33 -11.111 40.851 13.887 1.00 48.62 ATOM 487 C ARG 33 -5.332 40.248 11.194 1.00 36.71 ATOM 488 O ARG 33 -4.229 40.790 11.386 1.00 32.18 ATOM 489 N PRO 34 -5.443 39.210 10.345 1.00 38.55 ATOM 490 CD PRO 34 -6.637 38.435 10.020 1.00 45.95 ATOM 493 CG PRO 34 -6.317 37.713 8.716 1.00 49.71 ATOM 496 CB PRO 34 -4.810 37.513 8.806 1.00 42.55 ATOM 499 CA PRO 34 -4.295 38.726 9.581 1.00 35.99 ATOM 501 C PRO 34 -3.692 39.810 8.671 1.00 37.33 ATOM 502 O PRO 34 -2.544 39.683 8.261 1.00 35.05 ATOM 503 N PHE 35 -4.413 40.913 8.412 1.00 41.75 ATOM 505 CA PHE 35 -3.867 42.137 7.814 1.00 40.98 ATOM 507 CB PHE 35 -5.012 43.145 7.625 1.00 47.03 ATOM 510 CG PHE 35 -4.725 44.227 6.599 1.00 44.93 ATOM 511 CD1 PHE 35 -5.162 44.067 5.269 1.00 49.10 ATOM 513 CE1 PHE 35 -4.912 45.071 4.316 1.00 48.86 ATOM 515 CZ PHE 35 -4.218 46.236 4.687 1.00 49.22 ATOM 517 CE2 PHE 35 -3.775 46.396 6.012 1.00 47.93 ATOM 519 CD2 PHE 35 -4.031 45.396 6.966 1.00 42.55 ATOM 521 C PHE 35 -2.699 42.761 8.617 1.00 34.56 ATOM 522 O PHE 35 -1.712 43.223 8.041 1.00 35.42 ATOM 523 N TRP 36 -2.755 42.728 9.955 1.00 32.03 ATOM 525 CA TRP 36 -1.672 43.203 10.823 1.00 33.64 ATOM 527 CB TRP 36 -2.132 43.245 12.285 1.00 36.31 ATOM 530 CG TRP 36 -3.261 44.161 12.666 1.00 39.61 ATOM 531 CD1 TRP 36 -3.993 44.004 13.791 1.00 40.82 ATOM 533 NE1 TRP 36 -4.890 45.040 13.927 1.00 44.63 ATOM 535 CE2 TRP 36 -4.831 45.899 12.852 1.00 43.94 ATOM 536 CZ2 TRP 36 -5.550 47.058 12.526 1.00 49.46 ATOM 538 CH2 TRP 36 -5.244 47.737 11.335 1.00 49.71 ATOM 540 CZ3 TRP 36 -4.221 47.257 10.500 1.00 46.81 ATOM 542 CE3 TRP 36 -3.499 46.098 10.841 1.00 44.23 ATOM 544 CD2 TRP 36 -3.786 45.374 12.024 1.00 41.75 ATOM 545 C TRP 36 -0.428 42.326 10.689 1.00 30.29 ATOM 546 O TRP 36 0.671 42.859 10.488 1.00 31.78 ATOM 547 N ILE 37 -0.585 40.992 10.708 1.00 26.49 ATOM 549 CA ILE 37 0.620 40.155 10.467 1.00 23.68 ATOM 551 CB ILE 37 0.432 38.671 10.803 1.00 22.12 ATOM 553 CG2 ILE 37 1.739 37.903 10.538 1.00 20.53 ATOM 557 CG1 ILE 37 0.037 38.466 12.270 1.00 21.64 ATOM 560 CD1 ILE 37 0.970 39.121 13.297 1.00 24.70 ATOM 564 C ILE 37 1.167 40.332 9.037 1.00 25.42 ATOM 565 O ILE 37 2.377 40.423 8.850 1.00 23.96 ATOM 566 N SER 38 0.293 40.481 8.041 1.00 29.97 ATOM 568 CA SER 38 0.631 40.843 6.652 1.00 34.51 ATOM 570 CB SER 38 -0.625 40.765 5.772 1.00 43.94 ATOM 573 OG SER 38 -1.263 39.510 5.875 1.00 42.28 ATOM 575 C SER 38 1.208 42.266 6.486 1.00 35.36 ATOM 576 O SER 38 1.577 42.691 5.385 1.00 39.77 ATOM 577 N SER 39 1.251 43.054 7.561 1.00 32.55 ATOM 579 CA SER 39 1.976 44.323 7.620 1.00 36.65 ATOM 581 CB SER 39 1.197 45.345 8.458 1.00 43.85 ATOM 584 OG SER 39 -0.107 45.537 7.943 1.00 45.74 ATOM 586 C SER 39 3.386 44.118 8.197 1.00 34.74 ATOM 587 O SER 39 4.387 44.547 7.607 1.00 35.23 ATOM 588 N PHE 40 3.480 43.440 9.347 1.00 32.18 ATOM 590 CA PHE 40 4.780 43.200 9.984 1.00 28.85 ATOM 592 CB PHE 40 4.588 42.681 11.421 1.00 28.21 ATOM 595 CG PHE 40 4.306 43.774 12.455 1.00 32.87 ATOM 596 CD1 PHE 40 3.201 44.640 12.326 1.00 37.89 ATOM 598 CE1 PHE 40 2.958 45.642 13.286 1.00 44.93 ATOM 600 CZ PHE 40 3.797 45.766 14.408 1.00 47.93 ATOM 602 CE2 PHE 40 4.891 44.897 14.555 1.00 44.43 ATOM 604 CD2 PHE 40 5.148 43.919 13.578 1.00 36.51 ATOM 606 C PHE 40 5.694 42.324 9.094 1.00 25.39 ATOM 607 O PHE 40 6.705 42.791 8.548 1.00 26.29 ATOM 608 N ILE 41 5.267 41.102 8.785 1.00 22.69 ATOM 610 CA ILE 41 5.828 40.435 7.615 1.00 23.00 ATOM 612 CB ILE 41 5.356 38.984 7.436 1.00 23.30 ATOM 614 CG2 ILE 41 6.366 38.323 6.457 1.00 26.70 ATOM 618 CG1 ILE 41 5.119 38.207 8.761 1.00 20.53 ATOM 621 CD1 ILE 41 6.373 37.829 9.546 1.00 19.54 ATOM 625 C ILE 41 5.438 41.252 6.378 1.00 25.71 ATOM 626 O ILE 41 4.321 41.746 6.247 1.00 26.92 ATOM 627 N GLY 42 6.398 41.449 5.495 1.00 29.62 ATOM 629 CA GLY 42 6.318 42.346 4.367 1.00 35.99 ATOM 632 C GLY 42 6.938 43.712 4.629 1.00 38.62 ATOM 633 O GLY 42 7.441 44.269 3.655 1.00 47.59 ATOM 634 N ARG 43 6.962 44.253 5.869 1.00 34.93 ATOM 636 CA ARG 43 7.732 45.490 6.133 1.00 41.75 ATOM 638 CB ARG 43 6.864 46.607 6.769 1.00 45.23 ATOM 641 CG ARG 43 5.550 47.093 6.097 1.00 47.59 ATOM 644 CD ARG 43 5.316 46.858 4.591 1.00 47.93 ATOM 647 NE ARG 43 3.890 46.597 4.261 1.00 46.92 ATOM 649 CZ ARG 43 3.261 45.432 4.351 1.00 42.37 ATOM 650 NH1 ARG 43 2.033 45.270 3.957 1.00 48.62 ATOM 653 NH2 ARG 43 3.801 44.385 4.881 1.00 35.80 ATOM 656 C ARG 43 9.009 45.216 6.937 1.00 38.69 ATOM 657 O ARG 43 8.950 45.202 8.155 1.00 34.68 ATOM 658 N SER 44 10.142 45.071 6.241 1.00 40.16 ATOM 660 CA SER 44 11.546 44.917 6.705 1.00 35.92 ATOM 662 CB SER 44 12.405 44.760 5.445 1.00 39.69 ATOM 665 OG SER 44 12.290 45.882 4.596 1.00 48.62 ATOM 667 C SER 44 12.088 46.087 7.586 1.00 36.51 ATOM 668 O SER 44 13.181 46.585 7.325 1.00 39.22 ATOM 669 N LYS 45 11.304 46.607 8.546 1.00 37.47 ATOM 671 CA LYS 45 11.381 47.987 9.102 1.00 42.82 ATOM 673 CB LYS 45 10.501 48.128 10.356 1.00 42.64 ATOM 676 CG LYS 45 8.990 47.939 10.210 1.00 45.13 ATOM 679 CD LYS 45 8.370 47.911 11.615 1.00 45.95 ATOM 682 CE LYS 45 6.937 47.375 11.576 1.00 45.03 ATOM 685 NZ LYS 45 6.476 47.038 12.943 1.00 45.23 ATOM 689 C LYS 45 12.763 48.542 9.475 1.00 41.84 ATOM 690 O LYS 45 13.169 49.592 8.984 1.00 49.22 TER END