####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS312_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS312_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 34 - 42 4.89 77.89 LCS_AVERAGE: 17.82 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 2 - 6 1.12 93.45 LONGEST_CONTINUOUS_SEGMENT: 5 28 - 32 1.93 52.30 LONGEST_CONTINUOUS_SEGMENT: 5 29 - 33 1.81 55.01 LONGEST_CONTINUOUS_SEGMENT: 5 33 - 37 1.81 73.84 LONGEST_CONTINUOUS_SEGMENT: 5 34 - 38 1.70 74.82 LONGEST_CONTINUOUS_SEGMENT: 5 41 - 45 1.70 89.70 LCS_AVERAGE: 9.71 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 4 2 - 5 0.87 93.85 LONGEST_CONTINUOUS_SEGMENT: 4 3 - 6 0.95 93.76 LONGEST_CONTINUOUS_SEGMENT: 4 42 - 45 0.84 92.33 LCS_AVERAGE: 4.03 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 5 7 0 4 4 5 5 5 5 5 6 6 6 6 6 6 7 7 7 7 8 8 LCS_GDT V 3 V 3 4 5 7 2 4 4 5 5 5 5 5 6 6 6 6 6 6 7 7 7 7 8 8 LCS_GDT Q 4 Q 4 4 5 7 2 4 4 5 5 5 5 5 6 6 6 6 6 6 7 7 7 7 8 8 LCS_GDT G 5 G 5 4 5 7 2 4 4 5 5 5 5 5 6 6 6 6 6 6 7 7 7 7 9 9 LCS_GDT P 6 P 6 4 5 7 0 3 4 5 5 5 5 5 6 6 6 6 7 7 8 8 8 9 9 9 LCS_GDT W 7 W 7 0 4 7 0 0 2 4 4 4 5 5 6 6 6 6 7 7 8 8 8 9 9 9 LCS_GDT V 8 V 8 0 4 7 0 0 3 4 4 4 5 5 5 5 6 6 7 7 8 8 8 9 9 9 LCS_GDT G 9 G 9 0 4 7 0 0 3 4 4 4 5 5 5 5 6 6 7 7 8 8 8 9 9 9 LCS_GDT S 10 S 10 0 3 7 0 0 3 3 3 3 5 5 5 5 6 6 7 7 8 8 8 9 9 9 LCS_GDT S 11 S 11 0 3 7 0 1 3 3 3 3 3 4 4 5 6 6 7 7 8 8 8 9 9 9 LCS_GDT Y 12 Y 12 0 3 7 0 0 3 3 3 3 3 4 4 5 5 6 7 7 8 8 8 9 9 9 LCS_GDT V 13 V 13 0 3 7 0 0 3 3 3 3 3 4 4 5 5 6 6 7 8 8 8 9 9 9 LCS_GDT A 14 A 14 0 3 8 0 0 3 3 3 3 4 4 5 5 5 6 7 7 7 7 9 9 9 9 LCS_GDT E 15 E 15 0 4 8 0 0 3 4 4 5 5 6 6 6 6 6 7 7 8 8 9 9 9 9 LCS_GDT T 16 T 16 3 4 8 0 0 3 4 4 5 5 6 6 6 6 6 7 7 8 8 9 9 9 9 LCS_GDT G 17 G 17 3 4 8 0 3 4 4 4 5 5 6 6 6 6 6 7 7 8 8 9 9 9 9 LCS_GDT Q 18 Q 18 3 4 8 0 3 4 4 4 5 5 6 6 6 6 6 7 7 8 8 9 9 9 9 LCS_GDT N 19 N 19 3 4 8 0 3 4 4 4 5 5 6 6 6 6 6 7 7 8 8 9 9 9 9 LCS_GDT W 20 W 20 3 4 8 0 3 4 4 4 4 5 6 6 6 6 6 7 7 8 8 9 9 9 9 LCS_GDT A 21 A 21 3 4 8 0 3 3 4 4 4 5 5 6 6 6 6 7 7 8 8 9 9 9 9 LCS_GDT S 22 S 22 0 4 8 0 0 3 4 4 4 4 4 6 6 6 6 6 7 8 8 9 9 9 9 LCS_GDT L 23 L 23 0 3 7 0 0 3 3 3 3 3 4 4 5 6 6 6 7 7 8 8 8 8 9 LCS_GDT A 24 A 24 0 3 7 0 2 3 3 3 3 3 4 4 5 6 6 6 7 7 8 8 8 8 9 LCS_GDT A 25 A 25 0 3 7 0 2 3 3 3 3 3 4 4 5 6 6 6 7 7 8 8 8 8 9 LCS_GDT N 26 N 26 0 3 7 0 0 3 3 3 3 3 4 4 5 6 6 6 7 7 8 8 8 8 9 LCS_GDT E 27 E 27 0 4 8 0 0 3 3 4 4 6 6 6 7 7 7 8 8 8 8 8 8 9 9 LCS_GDT L 28 L 28 0 5 8 0 0 3 4 5 5 6 6 6 7 7 7 8 8 8 8 8 8 9 9 LCS_GDT R 29 R 29 0 5 8 0 0 3 4 5 5 6 6 6 7 7 7 8 8 8 8 8 8 9 9 LCS_GDT V 30 V 30 0 5 8 0 0 3 4 5 5 6 6 6 7 7 7 8 8 8 8 8 8 9 9 LCS_GDT T 31 T 31 3 5 8 0 2 3 4 5 5 6 6 6 7 7 7 8 8 8 8 8 8 9 9 LCS_GDT E 32 E 32 3 5 8 0 2 3 4 5 5 6 6 6 7 7 7 8 8 8 8 8 8 9 9 LCS_GDT R 33 R 33 3 5 8 0 2 3 4 5 5 6 6 6 7 7 7 8 8 8 9 10 10 10 10 LCS_GDT P 34 P 34 3 5 9 2 3 4 4 5 5 6 6 6 7 7 8 9 9 9 9 10 10 10 10 LCS_GDT F 35 F 35 3 5 9 0 3 4 4 5 5 6 6 6 6 6 8 9 9 9 9 10 10 10 10 LCS_GDT W 36 W 36 3 5 9 2 3 4 4 5 5 6 6 6 6 7 8 9 9 9 9 10 10 10 10 LCS_GDT I 37 I 37 0 5 9 0 2 4 4 5 5 6 6 6 6 7 8 9 9 9 9 10 10 10 10 LCS_GDT S 38 S 38 0 5 9 0 0 2 3 5 5 6 6 6 6 7 8 9 9 9 9 10 10 10 10 LCS_GDT S 39 S 39 0 4 9 0 0 3 3 4 4 4 5 6 6 7 8 9 9 9 9 10 10 10 10 LCS_GDT F 40 F 40 3 4 9 0 3 3 3 4 4 4 5 6 6 7 8 9 9 9 9 10 10 10 10 LCS_GDT I 41 I 41 3 5 9 0 3 3 4 4 5 5 5 6 6 7 8 9 9 9 9 10 10 10 10 LCS_GDT G 42 G 42 4 5 9 0 4 4 4 4 5 5 5 6 6 7 7 9 9 9 9 10 10 10 10 LCS_GDT R 43 R 43 4 5 8 0 4 4 4 4 5 5 5 5 6 7 7 8 8 8 9 9 9 10 10 LCS_GDT S 44 S 44 4 5 8 0 4 4 4 4 5 5 5 5 6 7 7 8 8 8 9 9 9 9 10 LCS_GDT K 45 K 45 4 5 8 0 4 4 4 4 5 5 5 5 5 6 7 8 8 8 8 8 8 9 10 LCS_AVERAGE LCS_A: 10.52 ( 4.03 9.71 17.82 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 2 4 4 5 5 5 6 6 6 7 7 8 9 9 9 9 10 10 10 10 GDT PERCENT_AT 4.55 9.09 9.09 11.36 11.36 11.36 13.64 13.64 13.64 15.91 15.91 18.18 20.45 20.45 20.45 20.45 22.73 22.73 22.73 22.73 GDT RMS_LOCAL 22.36 0.84 0.84 1.12 1.12 1.12 2.23 2.23 2.23 2.96 2.96 4.60 4.89 4.89 4.89 4.89 5.55 5.55 5.55 5.55 GDT RMS_ALL_AT 92.03 92.33 92.33 93.45 93.45 93.45 74.06 74.06 74.06 54.74 54.74 77.46 77.89 77.89 77.89 77.89 77.12 77.12 77.12 77.12 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 141.024 0 0.204 0.222 143.346 0.000 0.000 - LGA V 3 V 3 136.179 0 0.232 0.382 137.335 0.000 0.000 133.183 LGA Q 4 Q 4 135.009 0 0.163 1.133 140.630 0.000 0.000 140.630 LGA G 5 G 5 131.448 0 0.350 0.350 132.691 0.000 0.000 - LGA P 6 P 6 128.528 0 0.463 0.845 131.284 0.000 0.000 131.284 LGA W 7 W 7 124.189 0 0.362 1.329 126.052 0.000 0.000 123.930 LGA V 8 V 8 116.950 0 0.468 0.764 119.513 0.000 0.000 113.747 LGA G 9 G 9 111.949 0 0.394 0.394 113.997 0.000 0.000 - LGA S 10 S 10 110.705 0 0.578 0.599 112.638 0.000 0.000 112.638 LGA S 11 S 11 107.477 0 0.408 0.885 109.093 0.000 0.000 109.093 LGA Y 12 Y 12 100.007 0 0.501 1.433 102.563 0.000 0.000 97.493 LGA V 13 V 13 96.620 0 0.456 0.416 97.939 0.000 0.000 96.257 LGA A 14 A 14 95.772 0 0.466 0.650 97.042 0.000 0.000 - LGA E 15 E 15 90.361 0 0.409 1.373 92.186 0.000 0.000 89.728 LGA T 16 T 16 83.066 0 0.575 0.619 85.775 0.000 0.000 82.465 LGA G 17 G 17 79.856 0 0.714 0.714 81.556 0.000 0.000 - LGA Q 18 Q 18 73.637 0 0.307 1.064 75.578 0.000 0.000 70.658 LGA N 19 N 19 70.092 0 0.501 0.652 74.220 0.000 0.000 74.220 LGA W 20 W 20 62.646 0 0.288 1.177 65.249 0.000 0.000 59.946 LGA A 21 A 21 58.464 0 0.570 0.599 59.840 0.000 0.000 - LGA S 22 S 22 51.156 0 0.584 0.683 53.555 0.000 0.000 50.697 LGA L 23 L 23 49.158 0 0.584 1.209 49.891 0.000 0.000 49.223 LGA A 24 A 24 48.333 0 0.486 0.723 48.676 0.000 0.000 - LGA A 25 A 25 42.346 0 0.452 0.828 44.446 0.000 0.000 - LGA N 26 N 26 37.601 0 0.489 1.302 39.137 0.000 0.000 33.997 LGA E 27 E 27 37.549 0 0.540 0.815 38.933 0.000 0.000 37.811 LGA L 28 L 28 34.539 0 0.498 0.505 39.767 0.000 0.000 38.098 LGA R 29 R 29 27.923 0 0.567 1.633 30.580 0.000 0.000 30.580 LGA V 30 V 30 22.195 0 0.455 1.451 24.344 0.000 0.000 23.394 LGA T 31 T 31 14.807 0 0.567 0.685 17.463 0.000 0.000 16.276 LGA E 32 E 32 10.023 0 0.347 1.441 13.749 0.000 0.000 11.902 LGA R 33 R 33 3.389 0 0.425 1.279 8.921 24.091 15.207 8.921 LGA P 34 P 34 1.671 0 0.444 0.961 4.974 70.000 44.416 4.974 LGA F 35 F 35 0.903 0 0.448 1.552 9.556 75.455 29.091 9.556 LGA W 36 W 36 0.719 0 0.273 1.303 6.389 77.727 38.831 4.343 LGA I 37 I 37 2.259 0 0.572 1.379 4.931 41.818 24.773 4.931 LGA S 38 S 38 2.999 0 0.498 0.624 4.985 18.182 14.848 4.166 LGA S 39 S 39 9.370 0 0.566 0.626 11.590 0.000 0.000 10.417 LGA F 40 F 40 12.340 0 0.479 1.053 17.706 0.000 0.000 17.706 LGA I 41 I 41 12.486 0 0.181 0.705 14.048 0.000 0.000 11.160 LGA G 42 G 42 15.734 0 0.551 0.551 18.875 0.000 0.000 - LGA R 43 R 43 22.387 0 0.293 1.103 25.587 0.000 0.000 25.587 LGA S 44 S 44 26.978 0 0.351 0.369 30.328 0.000 0.000 25.990 LGA K 45 K 45 33.407 0 0.239 1.140 35.277 0.000 0.000 32.101 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 45.192 45.145 44.566 6.983 3.799 0.416 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 6 2.23 13.636 12.755 0.258 LGA_LOCAL RMSD: 2.225 Number of atoms: 6 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 74.057 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 45.192 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.749622 * X + 0.661515 * Y + -0.021566 * Z + 77.726646 Y_new = -0.200874 * X + -0.258434 * Y + -0.944914 * Z + 21.430540 Z_new = -0.630648 * X + -0.703996 * Y + 0.326609 * Z + -28.448118 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.879777 0.682388 -1.136414 [DEG: -164.9991 39.0979 -65.1117 ] ZXZ: -0.022820 1.238083 -2.411096 [DEG: -1.3075 70.9369 -138.1456 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS312_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS312_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 6 2.23 12.755 45.19 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS312_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT 1SRP_A ATOM 9 N ALA 2 -117.992 70.091 64.325 1.00 0.00 ATOM 10 CA ALA 2 -116.729 69.312 64.385 1.00 0.00 ATOM 11 CB ALA 2 -117.448 68.075 63.867 1.00 0.00 ATOM 12 C ALA 2 -115.315 69.448 63.951 1.00 0.00 ATOM 13 O ALA 2 -115.394 70.483 63.299 1.00 0.00 ATOM 14 N VAL 3 -114.209 68.722 63.824 1.00 0.00 ATOM 15 CA VAL 3 -113.193 69.039 62.825 1.00 0.00 ATOM 16 CB VAL 3 -111.857 69.808 62.890 1.00 0.00 ATOM 17 CG1 VAL 3 -111.545 70.427 61.535 1.00 0.00 ATOM 18 CG2 VAL 3 -111.929 70.883 63.958 1.00 0.00 ATOM 19 C VAL 3 -112.301 68.378 61.803 1.00 0.00 ATOM 20 O VAL 3 -112.534 67.183 61.947 1.00 0.00 ATOM 21 N GLN 4 -111.217 68.716 61.110 1.00 0.00 ATOM 22 CA GLN 4 -110.221 67.620 60.777 1.00 0.00 ATOM 23 CB GLN 4 -110.759 66.336 60.186 1.00 0.00 ATOM 24 CG GLN 4 -110.417 65.116 61.015 1.00 0.00 ATOM 25 CD GLN 4 -111.427 64.842 62.108 1.00 0.00 ATOM 26 OE1 GLN 4 -111.699 65.673 62.987 1.00 0.00 ATOM 27 NE2 GLN 4 -112.012 63.641 62.086 1.00 0.00 ATOM 28 C GLN 4 -108.992 67.972 59.776 1.00 0.00 ATOM 29 O GLN 4 -109.124 68.672 58.799 1.00 0.00 ATOM 30 N GLY 5 -107.762 67.582 60.195 1.00 0.00 ATOM 31 CA GLY 5 -106.599 67.210 59.467 1.00 0.00 ATOM 32 C GLY 5 -105.170 66.746 59.305 1.00 0.00 ATOM 33 O GLY 5 -104.517 66.661 60.320 1.00 0.00 ATOM 34 N PRO 6 -104.776 66.122 58.167 1.00 0.00 ATOM 35 CA PRO 6 -103.395 66.112 57.678 1.00 0.00 ATOM 36 CB PRO 6 -103.648 65.657 59.111 1.00 0.00 ATOM 37 CG PRO 6 -103.803 64.148 58.919 1.00 0.00 ATOM 38 CD PRO 6 -102.755 63.784 57.843 1.00 0.00 ATOM 39 C PRO 6 -102.082 65.923 57.237 1.00 0.00 ATOM 40 O PRO 6 -101.588 67.047 57.461 1.00 0.00 ATOM 41 N TRP 7 -101.268 65.973 56.338 1.00 0.00 ATOM 42 CA TRP 7 -100.165 65.257 55.812 1.00 0.00 ATOM 43 CB TRP 7 -100.562 64.456 54.547 1.00 0.00 ATOM 44 CG TRP 7 -99.621 63.310 54.231 1.00 0.00 ATOM 45 CD1 TRP 7 -98.646 63.312 53.270 1.00 0.00 ATOM 46 CD2 TRP 7 -99.525 62.016 54.870 1.00 0.00 ATOM 47 NE1 TRP 7 -97.931 62.127 53.263 1.00 0.00 ATOM 48 CE2 TRP 7 -98.449 61.312 54.236 1.00 0.00 ATOM 49 CE3 TRP 7 -100.249 61.379 55.893 1.00 0.00 ATOM 50 CZ2 TRP 7 -98.119 60.007 54.595 1.00 0.00 ATOM 51 CZ3 TRP 7 -99.918 60.077 56.235 1.00 0.00 ATOM 52 CH2 TRP 7 -98.864 59.411 55.598 1.00 0.00 ATOM 53 C TRP 7 -99.010 65.557 54.719 1.00 0.00 ATOM 54 O TRP 7 -99.022 66.496 53.957 1.00 0.00 ATOM 55 N VAL 8 -97.844 64.951 55.060 1.00 0.00 ATOM 56 CA VAL 8 -96.732 64.669 54.217 1.00 0.00 ATOM 57 CB VAL 8 -96.209 65.895 55.009 1.00 0.00 ATOM 58 CG1 VAL 8 -95.286 66.717 54.123 1.00 0.00 ATOM 59 CG2 VAL 8 -97.359 66.759 55.481 1.00 0.00 ATOM 60 C VAL 8 -95.184 64.282 54.027 1.00 0.00 ATOM 61 O VAL 8 -94.519 64.016 55.002 1.00 0.00 ATOM 62 N GLY 9 -94.835 63.825 52.798 1.00 0.00 ATOM 63 CA GLY 9 -93.463 63.676 52.333 1.00 0.00 ATOM 64 C GLY 9 -91.947 63.547 51.929 1.00 0.00 ATOM 65 O GLY 9 -91.377 62.715 52.597 1.00 0.00 ATOM 66 N SER 10 -91.635 63.725 50.622 1.00 0.00 ATOM 67 CA SER 10 -90.163 63.275 50.172 1.00 0.00 ATOM 68 CB SER 10 -89.954 61.931 49.470 1.00 0.00 ATOM 69 OG SER 10 -90.861 60.964 49.970 1.00 0.00 ATOM 70 C SER 10 -89.444 63.468 48.685 1.00 0.00 ATOM 71 O SER 10 -90.002 63.360 47.616 1.00 0.00 ATOM 72 N SER 11 -88.209 64.021 48.773 1.00 0.00 ATOM 73 CA SER 11 -87.124 64.133 47.781 1.00 0.00 ATOM 74 CB SER 11 -86.553 65.552 47.831 1.00 0.00 ATOM 75 OG SER 11 -87.433 66.418 48.528 1.00 0.00 ATOM 76 C SER 11 -85.985 63.572 46.933 1.00 0.00 ATOM 77 O SER 11 -86.330 62.456 46.559 1.00 0.00 ATOM 78 N TYR 12 -84.886 64.089 46.393 1.00 0.00 ATOM 79 CA TYR 12 -83.777 63.602 45.739 1.00 0.00 ATOM 80 CB TYR 12 -84.196 62.711 44.568 1.00 0.00 ATOM 81 CG TYR 12 -84.979 63.496 43.552 1.00 0.00 ATOM 82 CD1 TYR 12 -84.313 64.195 42.552 1.00 0.00 ATOM 83 CD2 TYR 12 -86.380 63.582 43.605 1.00 0.00 ATOM 84 CE1 TYR 12 -84.996 64.946 41.639 1.00 0.00 ATOM 85 CE2 TYR 12 -87.084 64.335 42.692 1.00 0.00 ATOM 86 CZ TYR 12 -86.373 65.021 41.703 1.00 0.00 ATOM 87 OH TYR 12 -86.990 65.806 40.764 1.00 0.00 ATOM 88 C TYR 12 -82.704 63.167 44.942 1.00 0.00 ATOM 89 O TYR 12 -83.103 62.015 44.813 1.00 0.00 ATOM 90 N VAL 13 -81.549 63.489 44.369 1.00 0.00 ATOM 91 CA VAL 13 -80.453 62.678 43.973 1.00 0.00 ATOM 92 CB VAL 13 -81.174 61.891 42.869 1.00 0.00 ATOM 93 CG1 VAL 13 -80.614 60.461 42.786 1.00 0.00 ATOM 94 CG2 VAL 13 -82.672 61.868 43.138 1.00 0.00 ATOM 95 C VAL 13 -79.237 62.026 43.561 1.00 0.00 ATOM 96 O VAL 13 -78.675 62.279 44.621 1.00 0.00 ATOM 97 N ALA 14 -78.498 61.524 42.576 1.00 0.00 ATOM 98 CA ALA 14 -77.084 61.536 42.502 1.00 0.00 ATOM 99 CB ALA 14 -77.515 60.095 42.732 1.00 0.00 ATOM 100 C ALA 14 -76.127 61.056 41.247 1.00 0.00 ATOM 101 O ALA 14 -76.546 60.700 40.170 1.00 0.00 ATOM 102 N GLU 15 -74.844 61.476 41.392 1.00 0.00 ATOM 103 CA GLU 15 -73.680 61.057 40.677 1.00 0.00 ATOM 104 CB GLU 15 -73.440 60.253 41.954 1.00 0.00 ATOM 105 CG GLU 15 -72.109 60.536 42.630 1.00 0.00 ATOM 106 CD GLU 15 -71.785 59.524 43.710 1.00 0.00 ATOM 107 OE1 GLU 15 -72.700 59.172 44.484 1.00 0.00 ATOM 108 OE2 GLU 15 -70.619 59.086 43.789 1.00 0.00 ATOM 109 C GLU 15 -72.490 60.475 39.828 1.00 0.00 ATOM 110 O GLU 15 -72.440 61.128 38.811 1.00 0.00 ATOM 111 N THR 16 -71.359 59.996 40.405 1.00 0.00 ATOM 112 CA THR 16 -70.152 59.759 39.388 1.00 0.00 ATOM 113 CB THR 16 -69.261 60.998 39.749 1.00 0.00 ATOM 114 OG1 THR 16 -69.494 61.410 41.106 1.00 0.00 ATOM 115 CG2 THR 16 -69.580 62.159 38.823 1.00 0.00 ATOM 116 C THR 16 -68.719 59.372 39.640 1.00 0.00 ATOM 117 O THR 16 -68.129 59.338 40.695 1.00 0.00 ATOM 118 N GLY 17 -68.300 58.633 38.582 1.00 0.00 ATOM 119 CA GLY 17 -66.881 57.509 38.761 1.00 0.00 ATOM 120 C GLY 17 -65.571 58.375 37.710 1.00 0.00 ATOM 121 O GLY 17 -65.534 59.560 37.400 1.00 0.00 ATOM 122 N GLN 18 -64.515 57.626 37.407 1.00 0.00 ATOM 123 CA GLN 18 -63.715 58.071 36.345 1.00 0.00 ATOM 124 CB GLN 18 -64.340 59.439 36.193 1.00 0.00 ATOM 125 CG GLN 18 -63.952 60.392 37.304 1.00 0.00 ATOM 126 CD GLN 18 -62.664 61.133 37.026 1.00 0.00 ATOM 127 OE1 GLN 18 -61.591 60.546 36.814 1.00 0.00 ATOM 128 NE2 GLN 18 -62.734 62.467 37.029 1.00 0.00 ATOM 129 C GLN 18 -62.544 57.472 35.600 1.00 0.00 ATOM 130 O GLN 18 -62.795 56.281 35.445 1.00 0.00 ATOM 131 N ASN 19 -61.459 57.957 35.005 1.00 0.00 ATOM 132 CA ASN 19 -60.372 57.457 34.252 1.00 0.00 ATOM 133 CB ASN 19 -60.406 58.650 33.271 1.00 0.00 ATOM 134 CG ASN 19 -61.800 59.214 33.017 1.00 0.00 ATOM 135 OD1 ASN 19 -62.433 59.960 33.876 1.00 0.00 ATOM 136 ND2 ASN 19 -62.266 58.882 31.806 1.00 0.00 ATOM 137 C ASN 19 -58.815 57.715 34.032 1.00 0.00 ATOM 138 O ASN 19 -58.236 58.728 34.353 1.00 0.00 ATOM 139 N TRP 20 -58.127 56.588 33.723 1.00 0.00 ATOM 140 CA TRP 20 -56.753 56.437 33.177 1.00 0.00 ATOM 141 CB TRP 20 -55.916 55.827 34.329 1.00 0.00 ATOM 142 CG TRP 20 -54.460 56.251 34.315 1.00 0.00 ATOM 143 CD1 TRP 20 -53.409 55.496 33.868 1.00 0.00 ATOM 144 CD2 TRP 20 -53.880 57.510 34.724 1.00 0.00 ATOM 145 NE1 TRP 20 -52.212 56.186 33.951 1.00 0.00 ATOM 146 CE2 TRP 20 -52.471 57.427 34.471 1.00 0.00 ATOM 147 CE3 TRP 20 -54.402 58.684 35.295 1.00 0.00 ATOM 148 CZ2 TRP 20 -51.608 58.471 34.799 1.00 0.00 ATOM 149 CZ3 TRP 20 -53.533 59.712 35.623 1.00 0.00 ATOM 150 CH2 TRP 20 -52.161 59.604 35.369 1.00 0.00 ATOM 151 C TRP 20 -55.687 56.434 32.116 1.00 0.00 ATOM 152 O TRP 20 -56.285 55.966 31.154 1.00 0.00 ATOM 153 N ALA 21 -54.360 56.469 32.060 1.00 0.00 ATOM 154 CA ALA 21 -53.668 55.676 30.960 1.00 0.00 ATOM 155 CB ALA 21 -54.077 56.709 29.920 1.00 0.00 ATOM 156 C ALA 21 -52.341 54.974 30.783 1.00 0.00 ATOM 157 O ALA 21 -51.798 55.050 31.879 1.00 0.00 ATOM 158 N SER 22 -51.600 54.576 29.753 1.00 0.00 ATOM 159 CA SER 22 -50.120 54.482 29.903 1.00 0.00 ATOM 160 CB SER 22 -50.034 53.000 30.175 1.00 0.00 ATOM 161 OG SER 22 -51.255 52.508 30.682 1.00 0.00 ATOM 162 C SER 22 -48.881 54.718 29.063 1.00 0.00 ATOM 163 O SER 22 -49.366 54.770 27.939 1.00 0.00 ATOM 164 N LEU 23 -47.568 54.532 29.160 1.00 0.00 ATOM 165 CA LEU 23 -46.801 54.149 27.897 1.00 0.00 ATOM 166 CB LEU 23 -46.498 54.432 26.401 1.00 0.00 ATOM 167 CG LEU 23 -46.576 55.903 26.057 1.00 0.00 ATOM 168 CD1 LEU 23 -45.493 56.694 26.783 1.00 0.00 ATOM 169 CD2 LEU 23 -46.510 56.144 24.553 1.00 0.00 ATOM 170 C LEU 23 -45.204 54.079 27.883 1.00 0.00 ATOM 171 O LEU 23 -44.535 54.896 28.474 1.00 0.00 ATOM 172 N ALA 24 -44.638 52.965 27.356 1.00 0.00 ATOM 173 CA ALA 24 -43.322 52.774 26.841 1.00 0.00 ATOM 174 CB ALA 24 -42.830 51.704 27.797 1.00 0.00 ATOM 175 C ALA 24 -42.250 51.991 26.080 1.00 0.00 ATOM 176 O ALA 24 -42.397 50.791 26.073 1.00 0.00 ATOM 177 N ALA 25 -41.385 52.593 25.226 1.00 0.00 ATOM 178 CA ALA 25 -40.106 52.020 24.813 1.00 0.00 ATOM 179 CB ALA 25 -40.501 51.767 23.371 1.00 0.00 ATOM 180 C ALA 25 -38.961 51.968 23.824 1.00 0.00 ATOM 181 O ALA 25 -39.132 52.542 22.773 1.00 0.00 ATOM 182 N ASN 26 -37.711 51.718 24.287 1.00 0.00 ATOM 183 CA ASN 26 -36.562 51.489 23.383 1.00 0.00 ATOM 184 CB ASN 26 -36.463 52.986 23.043 1.00 0.00 ATOM 185 CG ASN 26 -35.687 53.155 21.753 1.00 0.00 ATOM 186 OD1 ASN 26 -34.546 53.670 21.753 1.00 0.00 ATOM 187 ND2 ASN 26 -36.243 52.635 20.668 1.00 0.00 ATOM 188 C ASN 26 -35.012 51.139 23.450 1.00 0.00 ATOM 189 O ASN 26 -34.368 51.251 24.468 1.00 0.00 ATOM 190 N GLU 27 -34.560 50.378 22.421 1.00 0.00 ATOM 191 CA GLU 27 -33.179 50.073 22.111 1.00 0.00 ATOM 192 CB GLU 27 -33.055 48.971 23.163 1.00 0.00 ATOM 193 CG GLU 27 -34.019 49.108 24.327 1.00 0.00 ATOM 194 CD GLU 27 -33.672 48.181 25.474 1.00 0.00 ATOM 195 OE1 GLU 27 -33.339 47.009 25.206 1.00 0.00 ATOM 196 OE2 GLU 27 -33.738 48.623 26.640 1.00 0.00 ATOM 197 C GLU 27 -32.203 49.567 20.888 1.00 0.00 ATOM 198 O GLU 27 -32.623 48.906 19.968 1.00 0.00 ATOM 199 N LEU 28 -30.976 50.142 20.832 1.00 0.00 ATOM 200 CA LEU 28 -29.794 49.693 20.163 1.00 0.00 ATOM 201 CB LEU 28 -29.633 51.130 20.662 1.00 0.00 ATOM 202 CG LEU 28 -30.935 51.851 21.025 1.00 0.00 ATOM 203 CD1 LEU 28 -30.616 53.177 21.694 1.00 0.00 ATOM 204 CD2 LEU 28 -31.778 52.055 19.775 1.00 0.00 ATOM 205 C LEU 28 -28.591 49.097 19.428 1.00 0.00 ATOM 206 O LEU 28 -28.591 49.657 18.355 1.00 0.00 ATOM 207 N ARG 29 -27.428 48.742 20.027 1.00 0.00 ATOM 208 CA ARG 29 -26.195 48.512 18.972 1.00 0.00 ATOM 209 CB ARG 29 -25.827 49.885 18.402 1.00 0.00 ATOM 210 CG ARG 29 -25.866 50.019 16.877 1.00 0.00 ATOM 211 CD ARG 29 -24.855 49.133 16.202 1.00 0.00 ATOM 212 NE ARG 29 -24.115 49.823 15.147 1.00 0.00 ATOM 213 CZ ARG 29 -23.091 49.279 14.499 1.00 0.00 ATOM 214 NH1 ARG 29 -22.704 48.046 14.798 1.00 0.00 ATOM 215 NH2 ARG 29 -22.434 49.969 13.576 1.00 0.00 ATOM 216 C ARG 29 -25.141 47.407 18.882 1.00 0.00 ATOM 217 O ARG 29 -25.019 47.102 20.063 1.00 0.00 ATOM 218 N VAL 30 -24.197 47.002 18.040 1.00 0.00 ATOM 219 CA VAL 30 -22.894 46.395 18.621 1.00 0.00 ATOM 220 CB VAL 30 -23.614 45.102 19.031 1.00 0.00 ATOM 221 CG1 VAL 30 -24.834 44.863 18.124 1.00 0.00 ATOM 222 CG2 VAL 30 -22.652 43.924 18.958 1.00 0.00 ATOM 223 C VAL 30 -21.435 46.426 18.101 1.00 0.00 ATOM 224 O VAL 30 -21.059 47.592 18.046 1.00 0.00 ATOM 225 N THR 31 -20.534 45.476 17.879 1.00 0.00 ATOM 226 CA THR 31 -19.228 45.418 17.500 1.00 0.00 ATOM 227 CB THR 31 -19.164 44.269 18.586 1.00 0.00 ATOM 228 OG1 THR 31 -20.453 44.129 19.205 1.00 0.00 ATOM 229 CG2 THR 31 -18.117 44.558 19.678 1.00 0.00 ATOM 230 C THR 31 -18.228 44.469 16.600 1.00 0.00 ATOM 231 O THR 31 -18.469 43.324 16.295 1.00 0.00 ATOM 232 N GLU 32 -17.245 45.165 15.976 1.00 0.00 ATOM 233 CA GLU 32 -15.968 44.698 15.402 1.00 0.00 ATOM 234 CB GLU 32 -15.990 45.633 14.193 1.00 0.00 ATOM 235 CG GLU 32 -14.623 45.909 13.593 1.00 0.00 ATOM 236 CD GLU 32 -14.652 47.052 12.599 1.00 0.00 ATOM 237 OE1 GLU 32 -15.599 47.108 11.789 1.00 0.00 ATOM 238 OE2 GLU 32 -13.725 47.890 12.625 1.00 0.00 ATOM 239 C GLU 32 -14.574 44.103 15.223 1.00 0.00 ATOM 240 O GLU 32 -14.017 44.528 16.229 1.00 0.00 ATOM 241 N ARG 33 -13.812 43.567 14.275 1.00 0.00 ATOM 242 CA ARG 33 -12.308 43.857 14.275 1.00 0.00 ATOM 243 CB ARG 33 -12.745 42.630 15.089 1.00 0.00 ATOM 244 CG ARG 33 -11.624 41.664 15.481 1.00 0.00 ATOM 245 CD ARG 33 -12.199 40.410 16.155 1.00 0.00 ATOM 246 NE ARG 33 -13.018 40.781 17.305 1.00 0.00 ATOM 247 CZ ARG 33 -14.194 40.239 17.608 1.00 0.00 ATOM 248 NH1 ARG 33 -14.713 39.273 16.856 1.00 0.00 ATOM 249 NH2 ARG 33 -14.879 40.708 18.643 1.00 0.00 ATOM 250 C ARG 33 -10.884 43.691 13.778 1.00 0.00 ATOM 251 O ARG 33 -10.282 43.095 14.642 1.00 0.00 ATOM 252 N PRO 34 -10.505 43.606 12.478 1.00 0.00 ATOM 253 CA PRO 34 -8.960 43.234 12.221 1.00 0.00 ATOM 254 CB PRO 34 -9.055 42.047 11.268 1.00 0.00 ATOM 255 CG PRO 34 -9.393 40.917 12.239 1.00 0.00 ATOM 256 CD PRO 34 -10.360 41.556 13.260 1.00 0.00 ATOM 257 C PRO 34 -7.764 43.448 11.472 1.00 0.00 ATOM 258 O PRO 34 -7.154 44.246 12.214 1.00 0.00 ATOM 259 N PHE 35 -6.952 43.884 10.681 1.00 0.00 ATOM 260 CA PHE 35 -5.932 43.808 9.742 1.00 0.00 ATOM 261 CB PHE 35 -5.754 45.221 10.293 1.00 0.00 ATOM 262 CG PHE 35 -4.604 45.952 9.664 1.00 0.00 ATOM 263 CD1 PHE 35 -4.758 46.590 8.450 1.00 0.00 ATOM 264 CD2 PHE 35 -3.370 45.993 10.285 1.00 0.00 ATOM 265 CE1 PHE 35 -3.703 47.258 7.868 1.00 0.00 ATOM 266 CE2 PHE 35 -2.312 46.660 9.710 1.00 0.00 ATOM 267 CZ PHE 35 -2.478 47.294 8.499 1.00 0.00 ATOM 268 C PHE 35 -4.762 43.667 8.779 1.00 0.00 ATOM 269 O PHE 35 -4.938 44.581 8.007 1.00 0.00 ATOM 270 N TRP 36 -3.511 43.227 9.065 1.00 0.00 ATOM 271 CA TRP 36 -2.481 43.306 7.823 1.00 0.00 ATOM 272 CB TRP 36 -2.159 44.563 6.978 1.00 0.00 ATOM 273 CG TRP 36 -1.547 44.249 5.626 1.00 0.00 ATOM 274 CD1 TRP 36 -0.220 44.348 5.303 1.00 0.00 ATOM 275 CD2 TRP 36 -2.197 43.762 4.430 1.00 0.00 ATOM 276 NE1 TRP 36 0.019 43.948 3.999 1.00 0.00 ATOM 277 CE2 TRP 36 -1.176 43.581 3.440 1.00 0.00 ATOM 278 CE3 TRP 36 -3.533 43.482 4.092 1.00 0.00 ATOM 279 CZ2 TRP 36 -1.480 43.157 2.147 1.00 0.00 ATOM 280 CZ3 TRP 36 -3.824 43.069 2.801 1.00 0.00 ATOM 281 CH2 TRP 36 -2.808 42.904 1.853 1.00 0.00 ATOM 282 C TRP 36 -1.359 42.588 7.207 1.00 0.00 ATOM 283 O TRP 36 -1.231 41.660 7.997 1.00 0.00 ATOM 284 N ILE 37 -0.434 42.725 6.261 1.00 0.00 ATOM 285 CA ILE 37 0.982 42.155 6.404 1.00 0.00 ATOM 286 CB ILE 37 1.373 41.129 7.489 1.00 0.00 ATOM 287 CG1 ILE 37 0.794 41.551 8.843 1.00 0.00 ATOM 288 CG2 ILE 37 2.889 41.017 7.574 1.00 0.00 ATOM 289 CD1 ILE 37 0.857 40.460 9.912 1.00 0.00 ATOM 290 C ILE 37 2.063 41.398 5.584 1.00 0.00 ATOM 291 O ILE 37 1.750 40.402 4.973 1.00 0.00 ATOM 292 N SER 38 3.157 42.119 5.227 1.00 0.00 ATOM 293 CA SER 38 4.452 41.525 4.798 1.00 0.00 ATOM 294 CB SER 38 4.595 42.267 3.466 1.00 0.00 ATOM 295 OG SER 38 3.352 42.826 3.075 1.00 0.00 ATOM 296 C SER 38 5.932 41.981 4.306 1.00 0.00 ATOM 297 O SER 38 6.406 43.075 4.509 1.00 0.00 ATOM 298 N SER 39 6.729 40.897 4.132 1.00 0.00 ATOM 299 CA SER 39 8.069 40.880 3.543 1.00 0.00 ATOM 300 CB SER 39 8.988 40.200 4.560 1.00 0.00 ATOM 301 OG SER 39 8.380 40.182 5.842 1.00 0.00 ATOM 302 C SER 39 9.214 39.875 2.898 1.00 0.00 ATOM 303 O SER 39 9.171 38.667 2.949 1.00 0.00 ATOM 304 N PHE 40 10.019 40.507 2.007 1.00 0.00 ATOM 305 CA PHE 40 11.298 40.091 1.471 1.00 0.00 ATOM 306 CB PHE 40 10.687 38.761 1.121 1.00 0.00 ATOM 307 CG PHE 40 11.723 37.652 1.076 1.00 0.00 ATOM 308 CD1 PHE 40 12.260 37.138 2.242 1.00 0.00 ATOM 309 CD2 PHE 40 12.136 37.156 -0.145 1.00 0.00 ATOM 310 CE1 PHE 40 13.201 36.108 2.196 1.00 0.00 ATOM 311 CE2 PHE 40 13.071 36.144 -0.203 1.00 0.00 ATOM 312 CZ PHE 40 13.610 35.639 0.966 1.00 0.00 ATOM 313 C PHE 40 12.549 39.798 0.722 1.00 0.00 ATOM 314 O PHE 40 12.368 40.052 -0.447 1.00 0.00 ATOM 315 N ILE 41 13.800 39.795 1.249 1.00 0.00 ATOM 316 CA ILE 41 15.017 39.579 0.253 1.00 0.00 ATOM 317 CB ILE 41 15.976 40.750 0.372 1.00 0.00 ATOM 318 CG1 ILE 41 15.393 42.030 -0.150 1.00 0.00 ATOM 319 CG2 ILE 41 17.253 40.419 -0.380 1.00 0.00 ATOM 320 CD1 ILE 41 16.087 43.283 0.441 1.00 0.00 ATOM 321 C ILE 41 16.572 39.286 0.676 1.00 0.00 ATOM 322 O ILE 41 17.118 39.802 1.624 1.00 0.00 ATOM 323 N GLY 42 17.154 38.258 0.010 1.00 0.00 ATOM 324 CA GLY 42 18.539 37.925 -0.157 1.00 0.00 ATOM 325 C GLY 42 19.964 38.027 -0.758 1.00 0.00 ATOM 326 O GLY 42 20.184 39.216 -0.961 1.00 0.00 ATOM 327 N ARG 43 20.968 37.175 -0.936 1.00 0.00 ATOM 328 CA ARG 43 22.196 37.232 -1.497 1.00 0.00 ATOM 329 CB ARG 43 23.134 38.330 -0.989 1.00 0.00 ATOM 330 CG ARG 43 22.560 39.741 -1.067 1.00 0.00 ATOM 331 CD ARG 43 21.458 39.918 -0.038 1.00 0.00 ATOM 332 NE ARG 43 21.165 41.318 0.260 1.00 0.00 ATOM 333 CZ ARG 43 20.664 42.194 -0.606 1.00 0.00 ATOM 334 NH1 ARG 43 20.391 41.831 -1.853 1.00 0.00 ATOM 335 NH2 ARG 43 20.423 43.439 -0.218 1.00 0.00 ATOM 336 C ARG 43 23.391 36.357 -2.211 1.00 0.00 ATOM 337 O ARG 43 23.326 35.152 -2.311 1.00 0.00 ATOM 338 N SER 44 24.224 37.078 -3.003 1.00 0.00 ATOM 339 CA SER 44 25.537 36.657 -3.547 1.00 0.00 ATOM 340 CB SER 44 25.456 37.045 -5.025 1.00 0.00 ATOM 341 OG SER 44 24.111 37.292 -5.401 1.00 0.00 ATOM 342 C SER 44 27.039 36.549 -3.821 1.00 0.00 ATOM 343 O SER 44 27.424 37.520 -3.181 1.00 0.00 ATOM 344 N LYS 45 27.918 35.942 -4.612 1.00 0.00 ATOM 345 CA LYS 45 29.343 36.318 -4.807 1.00 0.00 ATOM 346 CB LYS 45 29.851 35.733 -3.490 1.00 0.00 ATOM 347 CG LYS 45 28.738 35.298 -2.544 1.00 0.00 ATOM 348 CD LYS 45 28.194 36.448 -1.712 1.00 0.00 ATOM 349 CE LYS 45 28.425 36.186 -0.222 1.00 0.00 ATOM 350 NZ LYS 45 27.889 37.252 0.667 1.00 0.00 ATOM 351 C LYS 45 30.369 36.647 -5.985 1.00 0.00 ATOM 352 O LYS 45 29.759 36.476 -7.035 1.00 0.00 TER END