####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS337_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS337_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 25 - 40 4.94 19.46 LONGEST_CONTINUOUS_SEGMENT: 16 26 - 41 4.61 20.21 LCS_AVERAGE: 32.33 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 29 - 38 1.86 23.39 LCS_AVERAGE: 16.99 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 28 - 33 0.82 22.12 LONGEST_CONTINUOUS_SEGMENT: 6 30 - 35 0.87 22.33 LONGEST_CONTINUOUS_SEGMENT: 6 31 - 36 0.97 25.64 LONGEST_CONTINUOUS_SEGMENT: 6 32 - 37 0.99 24.70 LONGEST_CONTINUOUS_SEGMENT: 6 33 - 38 0.91 22.68 LCS_AVERAGE: 9.14 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 9 13 3 3 6 7 9 9 9 9 9 9 9 11 12 12 12 12 13 16 17 19 LCS_GDT V 3 V 3 4 9 13 3 4 4 5 9 9 9 9 9 9 9 10 12 12 12 12 13 13 17 18 LCS_GDT Q 4 Q 4 4 9 13 3 4 4 6 9 9 9 9 9 10 10 11 12 12 12 14 16 19 19 20 LCS_GDT G 5 G 5 4 9 13 3 4 4 7 9 9 9 9 9 10 10 11 12 12 14 16 18 19 19 20 LCS_GDT P 6 P 6 4 9 13 3 4 6 7 9 9 9 9 9 10 10 11 12 12 14 16 18 19 19 20 LCS_GDT W 7 W 7 4 9 13 3 4 6 7 9 9 9 9 9 10 10 11 12 12 14 16 18 19 19 20 LCS_GDT V 8 V 8 4 9 13 3 4 6 7 9 9 9 9 9 10 10 11 12 12 14 16 18 19 19 20 LCS_GDT G 9 G 9 4 9 13 3 4 6 7 9 9 9 9 9 10 10 11 12 12 14 16 18 19 19 20 LCS_GDT S 10 S 10 4 9 13 3 4 6 7 9 9 9 9 9 10 10 11 12 12 14 16 18 19 19 20 LCS_GDT S 11 S 11 3 4 13 3 3 3 4 5 5 6 8 8 10 10 11 12 12 14 16 18 19 19 20 LCS_GDT Y 12 Y 12 3 4 13 3 3 3 3 4 5 6 8 8 10 10 11 12 12 14 16 18 19 19 20 LCS_GDT V 13 V 13 3 3 13 3 3 3 3 3 4 5 8 8 10 10 11 12 12 14 16 18 19 19 20 LCS_GDT A 14 A 14 3 6 13 3 3 3 3 5 7 7 7 8 9 10 10 11 12 14 16 18 19 19 20 LCS_GDT E 15 E 15 3 6 12 3 3 3 4 5 7 7 7 8 8 9 10 11 12 14 16 18 19 19 20 LCS_GDT T 16 T 16 3 6 12 3 3 3 4 5 7 7 7 8 8 9 10 11 12 13 16 18 19 19 20 LCS_GDT G 17 G 17 4 6 13 3 4 4 5 5 7 7 8 9 10 10 10 11 13 14 16 19 20 21 22 LCS_GDT Q 18 Q 18 4 6 13 3 4 4 5 5 7 7 8 9 10 12 13 14 14 16 17 19 20 21 24 LCS_GDT N 19 N 19 4 6 13 3 4 4 5 5 7 7 8 10 12 12 13 14 15 16 17 19 20 21 24 LCS_GDT W 20 W 20 4 6 13 3 4 4 5 5 7 7 8 10 12 12 13 14 15 16 17 19 20 21 24 LCS_GDT A 21 A 21 3 6 13 3 3 3 4 5 6 7 8 10 12 12 13 14 15 16 17 19 20 21 24 LCS_GDT S 22 S 22 3 6 13 3 3 3 5 5 8 9 9 10 12 12 13 14 15 16 17 19 20 21 24 LCS_GDT L 23 L 23 3 4 13 3 3 4 4 5 6 8 10 10 12 12 13 14 15 16 17 19 20 21 24 LCS_GDT A 24 A 24 3 4 14 3 3 3 4 4 5 7 8 10 12 12 13 14 15 16 17 19 20 21 24 LCS_GDT A 25 A 25 3 4 16 3 3 3 4 4 4 6 8 10 12 12 13 14 15 16 17 19 20 21 24 LCS_GDT N 26 N 26 3 4 16 3 3 3 4 4 5 6 8 10 12 12 15 16 16 16 17 19 20 21 24 LCS_GDT E 27 E 27 3 9 16 3 3 4 5 7 8 10 12 12 13 13 15 16 16 16 17 19 20 21 22 LCS_GDT L 28 L 28 6 9 16 3 6 6 8 9 10 11 12 12 13 13 15 16 16 16 17 19 20 21 24 LCS_GDT R 29 R 29 6 10 16 3 6 6 8 8 10 11 12 12 13 13 14 16 16 16 17 19 20 21 24 LCS_GDT V 30 V 30 6 10 16 4 6 7 8 9 10 11 12 12 13 13 15 16 16 16 17 19 20 21 24 LCS_GDT T 31 T 31 6 10 16 4 6 7 8 9 10 11 12 12 13 13 15 16 16 16 17 19 20 21 24 LCS_GDT E 32 E 32 6 10 16 4 6 7 8 9 10 11 12 12 13 13 15 16 16 16 17 19 20 21 24 LCS_GDT R 33 R 33 6 10 16 4 6 7 8 9 10 11 12 12 13 13 15 16 16 16 17 18 19 20 22 LCS_GDT P 34 P 34 6 10 16 3 5 7 8 9 10 11 12 12 13 13 15 16 16 16 17 19 20 21 22 LCS_GDT F 35 F 35 6 10 16 4 5 7 8 9 10 11 12 12 13 13 15 16 16 16 17 19 20 21 24 LCS_GDT W 36 W 36 6 10 16 4 5 6 8 9 10 11 12 12 13 13 15 16 16 16 17 19 20 21 24 LCS_GDT I 37 I 37 6 10 16 4 5 6 7 9 9 11 12 12 13 13 15 16 16 16 17 19 20 21 24 LCS_GDT S 38 S 38 6 10 16 4 4 7 8 9 10 11 12 12 13 13 15 16 16 16 17 19 20 21 24 LCS_GDT S 39 S 39 3 7 16 3 3 5 6 7 8 10 11 12 13 13 15 16 16 16 17 19 20 21 24 LCS_GDT F 40 F 40 3 7 16 3 3 4 5 6 8 10 11 12 12 13 15 16 16 16 17 18 20 21 24 LCS_GDT I 41 I 41 3 7 16 3 3 3 4 6 8 10 11 12 12 13 15 16 16 16 17 18 20 21 24 LCS_GDT G 42 G 42 3 7 14 3 3 4 5 6 8 10 11 12 12 13 13 13 14 16 17 18 20 21 24 LCS_GDT R 43 R 43 3 7 14 3 3 3 4 6 8 10 11 12 12 13 13 13 14 15 17 18 19 21 24 LCS_GDT S 44 S 44 3 7 14 3 3 5 5 6 8 9 11 12 12 13 13 13 14 15 17 18 20 21 24 LCS_GDT K 45 K 45 3 7 14 3 3 4 5 6 8 9 10 10 12 12 13 13 14 15 17 17 18 20 21 LCS_AVERAGE LCS_A: 19.49 ( 9.14 16.99 32.33 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 6 7 8 9 10 11 12 12 13 13 15 16 16 16 17 19 20 21 24 GDT PERCENT_AT 9.09 13.64 15.91 18.18 20.45 22.73 25.00 27.27 27.27 29.55 29.55 34.09 36.36 36.36 36.36 38.64 43.18 45.45 47.73 54.55 GDT RMS_LOCAL 0.14 0.82 1.01 1.14 1.41 1.92 2.11 2.50 2.50 2.85 2.85 4.60 4.61 4.61 4.61 5.16 6.39 6.58 6.83 7.60 GDT RMS_ALL_AT 21.14 22.12 24.18 24.48 24.14 22.37 22.35 21.22 21.22 21.35 21.35 19.95 20.21 20.21 20.21 19.12 23.34 23.05 22.40 17.35 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 33.426 0 0.036 0.052 33.426 0.000 0.000 - LGA V 3 V 3 34.633 0 0.097 1.109 38.789 0.000 0.000 37.206 LGA Q 4 Q 4 30.612 0 0.018 0.292 32.548 0.000 0.000 26.760 LGA G 5 G 5 32.320 0 0.112 0.112 32.320 0.000 0.000 - LGA P 6 P 6 33.790 0 0.065 0.428 34.472 0.000 0.000 33.197 LGA W 7 W 7 30.560 0 0.444 1.159 31.896 0.000 0.000 30.470 LGA V 8 V 8 30.199 0 0.647 0.645 31.748 0.000 0.000 30.777 LGA G 9 G 9 29.028 0 0.558 0.558 30.772 0.000 0.000 - LGA S 10 S 10 28.475 0 0.682 0.738 28.475 0.000 0.000 27.129 LGA S 11 S 11 27.700 0 0.627 0.926 29.068 0.000 0.000 29.068 LGA Y 12 Y 12 28.421 0 0.664 0.976 30.659 0.000 0.000 30.659 LGA V 13 V 13 29.782 0 0.598 0.984 32.653 0.000 0.000 31.831 LGA A 14 A 14 23.283 0 0.633 0.610 25.507 0.000 0.000 - LGA E 15 E 15 23.351 0 0.648 1.244 23.693 0.000 0.000 21.242 LGA T 16 T 16 25.045 0 0.718 1.017 27.962 0.000 0.000 27.962 LGA G 17 G 17 25.355 0 0.699 0.699 26.177 0.000 0.000 - LGA Q 18 Q 18 25.137 0 0.040 1.430 25.639 0.000 0.000 24.037 LGA N 19 N 19 26.676 0 0.672 1.035 29.077 0.000 0.000 29.077 LGA W 20 W 20 25.970 0 0.005 0.356 32.300 0.000 0.000 30.753 LGA A 21 A 21 21.453 0 0.651 0.607 22.897 0.000 0.000 - LGA S 22 S 22 20.539 0 0.565 0.767 23.108 0.000 0.000 23.108 LGA L 23 L 23 17.180 0 0.632 1.205 20.210 0.000 0.000 19.977 LGA A 24 A 24 13.827 0 0.636 0.612 15.161 0.000 0.000 - LGA A 25 A 25 12.773 0 0.592 0.575 14.995 0.000 0.000 - LGA N 26 N 26 10.968 0 0.655 0.942 15.682 0.000 0.000 12.223 LGA E 27 E 27 4.154 0 0.592 1.334 6.683 17.727 16.162 4.538 LGA L 28 L 28 1.660 0 0.653 1.241 4.570 31.818 29.545 4.570 LGA R 29 R 29 3.173 0 0.510 0.609 7.290 33.182 12.562 7.290 LGA V 30 V 30 1.959 0 0.047 0.086 2.413 41.364 40.000 2.413 LGA T 31 T 31 2.213 0 0.093 1.065 4.799 44.545 30.390 4.182 LGA E 32 E 32 0.999 0 0.032 1.122 2.181 65.909 59.394 2.181 LGA R 33 R 33 2.370 0 0.153 1.591 14.762 39.545 14.545 14.762 LGA P 34 P 34 1.408 0 0.365 0.383 2.509 52.273 62.597 0.658 LGA F 35 F 35 1.718 0 0.207 1.080 9.837 37.727 16.198 9.837 LGA W 36 W 36 2.367 0 0.068 1.192 5.616 51.818 22.338 4.848 LGA I 37 I 37 3.469 0 0.106 0.423 6.304 25.455 12.727 6.304 LGA S 38 S 38 2.613 0 0.660 0.735 6.783 18.182 12.121 6.783 LGA S 39 S 39 6.210 0 0.672 0.858 8.299 2.727 1.818 6.763 LGA F 40 F 40 10.247 0 0.623 0.981 13.495 0.000 0.000 10.920 LGA I 41 I 41 12.488 0 0.105 1.229 14.536 0.000 0.000 11.419 LGA G 42 G 42 19.038 0 0.200 0.200 21.695 0.000 0.000 - LGA R 43 R 43 21.700 0 0.287 1.176 28.813 0.000 0.000 28.813 LGA S 44 S 44 22.396 0 0.122 0.688 25.491 0.000 0.000 21.372 LGA K 45 K 45 25.850 0 0.041 0.939 27.711 0.000 0.000 27.679 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 13.561 13.387 14.168 10.506 7.509 4.831 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.50 24.432 23.088 0.462 LGA_LOCAL RMSD: 2.497 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 21.216 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 13.561 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.078516 * X + 0.026883 * Y + 0.996550 * Z + -30.342648 Y_new = 0.088197 * X + -0.995529 * Y + 0.033804 * Z + 64.931259 Z_new = 0.993004 * X + 0.090547 * Y + 0.075794 * Z + -189.384949 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.298191 -1.452438 0.873856 [DEG: 131.6767 -83.2185 50.0683 ] ZXZ: 1.604704 1.494929 1.479863 [DEG: 91.9428 85.6531 84.7899 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS337_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS337_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.50 23.088 13.56 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS337_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 9 N ALA 2 29.246 31.559 -12.764 1.00177.55 N ATOM 10 CA ALA 2 30.552 30.981 -12.837 1.00177.55 C ATOM 11 CB ALA 2 31.412 31.244 -11.589 1.00177.55 C ATOM 12 C ALA 2 30.377 29.509 -12.968 1.00177.55 C ATOM 13 O ALA 2 29.379 28.946 -12.520 1.00177.55 O ATOM 14 N VAL 3 31.349 28.848 -13.621 1.00134.34 N ATOM 15 CA VAL 3 31.272 27.429 -13.779 1.00134.34 C ATOM 16 CB VAL 3 32.245 26.883 -14.782 1.00134.34 C ATOM 17 CG1 VAL 3 31.887 27.443 -16.170 1.00134.34 C ATOM 18 CG2 VAL 3 33.667 27.240 -14.320 1.00134.34 C ATOM 19 C VAL 3 31.601 26.835 -12.453 1.00134.34 C ATOM 20 O VAL 3 32.383 27.395 -11.687 1.00134.34 O ATOM 21 N GLN 4 30.986 25.682 -12.136 1.00190.38 N ATOM 22 CA GLN 4 31.250 25.078 -10.868 1.00190.38 C ATOM 23 CB GLN 4 30.370 23.851 -10.573 1.00190.38 C ATOM 24 CG GLN 4 28.883 24.195 -10.443 1.00190.38 C ATOM 25 CD GLN 4 28.110 22.915 -10.157 1.00190.38 C ATOM 26 OE1 GLN 4 28.672 21.822 -10.139 1.00190.38 O ATOM 27 NE2 GLN 4 26.777 23.056 -9.925 1.00190.38 N ATOM 28 C GLN 4 32.678 24.649 -10.883 1.00190.38 C ATOM 29 O GLN 4 33.197 24.216 -11.911 1.00190.38 O ATOM 30 N GLY 5 33.353 24.783 -9.728 1.00157.78 N ATOM 31 CA GLY 5 34.741 24.445 -9.648 1.00157.78 C ATOM 32 C GLY 5 34.835 22.997 -9.312 1.00157.78 C ATOM 33 O GLY 5 33.886 22.231 -9.469 1.00157.78 O ATOM 34 N PRO 6 35.995 22.615 -8.867 1.00246.94 N ATOM 35 CA PRO 6 36.213 21.250 -8.490 1.00246.94 C ATOM 36 CD PRO 6 37.222 23.269 -9.293 1.00246.94 C ATOM 37 CB PRO 6 37.716 21.126 -8.250 1.00246.94 C ATOM 38 CG PRO 6 38.316 22.193 -9.186 1.00246.94 C ATOM 39 C PRO 6 35.358 20.912 -7.319 1.00246.94 C ATOM 40 O PRO 6 35.064 19.735 -7.117 1.00246.94 O ATOM 41 N TRP 7 34.961 21.921 -6.524 1.00284.60 N ATOM 42 CA TRP 7 34.112 21.643 -5.407 1.00284.60 C ATOM 43 CB TRP 7 34.716 22.038 -4.050 1.00284.60 C ATOM 44 CG TRP 7 33.847 21.681 -2.869 1.00284.60 C ATOM 45 CD2 TRP 7 33.848 20.385 -2.250 1.00284.60 C ATOM 46 CD1 TRP 7 32.938 22.436 -2.187 1.00284.60 C ATOM 47 NE1 TRP 7 32.375 21.693 -1.175 1.00284.60 N ATOM 48 CE2 TRP 7 32.925 20.427 -1.205 1.00284.60 C ATOM 49 CE3 TRP 7 34.560 19.255 -2.530 1.00284.60 C ATOM 50 CZ2 TRP 7 32.701 19.331 -0.420 1.00284.60 C ATOM 51 CZ3 TRP 7 34.331 18.152 -1.738 1.00284.60 C ATOM 52 CH2 TRP 7 33.419 18.191 -0.704 1.00284.60 C ATOM 53 C TRP 7 32.886 22.463 -5.613 1.00284.60 C ATOM 54 O TRP 7 32.933 23.513 -6.253 1.00284.60 O ATOM 55 N VAL 8 31.739 21.994 -5.089 1.00 54.08 N ATOM 56 CA VAL 8 30.542 22.745 -5.301 1.00 54.08 C ATOM 57 CB VAL 8 29.314 21.893 -5.427 1.00 54.08 C ATOM 58 CG1 VAL 8 28.089 22.813 -5.550 1.00 54.08 C ATOM 59 CG2 VAL 8 29.505 20.948 -6.626 1.00 54.08 C ATOM 60 C VAL 8 30.351 23.643 -4.129 1.00 54.08 C ATOM 61 O VAL 8 30.344 23.206 -2.979 1.00 54.08 O ATOM 62 N GLY 9 30.215 24.949 -4.412 1.00 57.68 N ATOM 63 CA GLY 9 29.996 25.912 -3.379 1.00 57.68 C ATOM 64 C GLY 9 31.338 26.369 -2.921 1.00 57.68 C ATOM 65 O GLY 9 32.253 25.566 -2.748 1.00 57.68 O ATOM 66 N SER 10 31.490 27.687 -2.708 1.00152.25 N ATOM 67 CA SER 10 32.746 28.167 -2.228 1.00152.25 C ATOM 68 CB SER 10 32.993 29.658 -2.511 1.00152.25 C ATOM 69 OG SER 10 33.091 29.878 -3.910 1.00152.25 O ATOM 70 C SER 10 32.723 27.984 -0.751 1.00152.25 C ATOM 71 O SER 10 31.656 27.864 -0.150 1.00152.25 O ATOM 72 N SER 11 33.907 27.936 -0.117 1.00167.42 N ATOM 73 CA SER 11 33.885 27.783 1.302 1.00167.42 C ATOM 74 CB SER 11 35.273 27.572 1.928 1.00167.42 C ATOM 75 OG SER 11 35.826 26.344 1.481 1.00167.42 O ATOM 76 C SER 11 33.333 29.054 1.846 1.00167.42 C ATOM 77 O SER 11 33.716 30.142 1.421 1.00167.42 O ATOM 78 N TYR 12 32.392 28.945 2.798 1.00245.65 N ATOM 79 CA TYR 12 31.835 30.131 3.373 1.00245.65 C ATOM 80 CB TYR 12 30.312 30.242 3.182 1.00245.65 C ATOM 81 CG TYR 12 29.846 31.527 3.780 1.00245.65 C ATOM 82 CD1 TYR 12 29.980 32.706 3.083 1.00245.65 C ATOM 83 CD2 TYR 12 29.270 31.558 5.029 1.00245.65 C ATOM 84 CE1 TYR 12 29.548 33.896 3.620 1.00245.65 C ATOM 85 CE2 TYR 12 28.836 32.745 5.573 1.00245.65 C ATOM 86 CZ TYR 12 28.978 33.917 4.870 1.00245.65 C ATOM 87 OH TYR 12 28.533 35.134 5.427 1.00245.65 O ATOM 88 C TYR 12 32.097 30.016 4.833 1.00245.65 C ATOM 89 O TYR 12 31.809 28.985 5.440 1.00245.65 O ATOM 90 N VAL 13 32.672 31.068 5.441 1.00137.89 N ATOM 91 CA VAL 13 32.940 30.954 6.839 1.00137.89 C ATOM 92 CB VAL 13 34.140 31.740 7.291 1.00137.89 C ATOM 93 CG1 VAL 13 33.954 33.219 6.911 1.00137.89 C ATOM 94 CG2 VAL 13 34.325 31.508 8.801 1.00137.89 C ATOM 95 C VAL 13 31.736 31.449 7.564 1.00137.89 C ATOM 96 O VAL 13 31.335 32.604 7.430 1.00137.89 O ATOM 97 N ALA 14 31.104 30.554 8.344 1.00213.26 N ATOM 98 CA ALA 14 29.955 30.971 9.080 1.00213.26 C ATOM 99 CB ALA 14 29.148 29.807 9.683 1.00213.26 C ATOM 100 C ALA 14 30.460 31.805 10.201 1.00213.26 C ATOM 101 O ALA 14 31.513 31.524 10.772 1.00213.26 O ATOM 102 N GLU 15 29.723 32.877 10.534 1.00295.89 N ATOM 103 CA GLU 15 30.145 33.707 11.616 1.00295.89 C ATOM 104 CB GLU 15 30.509 35.137 11.168 1.00295.89 C ATOM 105 CG GLU 15 29.431 35.839 10.335 1.00295.89 C ATOM 106 CD GLU 15 28.639 36.767 11.241 1.00295.89 C ATOM 107 OE1 GLU 15 29.069 36.957 12.408 1.00295.89 O ATOM 108 OE2 GLU 15 27.602 37.310 10.773 1.00295.89 O ATOM 109 C GLU 15 29.034 33.722 12.612 1.00295.89 C ATOM 110 O GLU 15 27.859 33.775 12.253 1.00295.89 O ATOM 111 N THR 16 29.396 33.653 13.905 1.00170.53 N ATOM 112 CA THR 16 28.410 33.593 14.941 1.00170.53 C ATOM 113 CB THR 16 28.978 33.133 16.257 1.00170.53 C ATOM 114 OG1 THR 16 29.585 31.859 16.099 1.00170.53 O ATOM 115 CG2 THR 16 27.855 33.032 17.301 1.00170.53 C ATOM 116 C THR 16 27.854 34.967 15.100 1.00170.53 C ATOM 117 O THR 16 28.446 35.946 14.649 1.00170.53 O ATOM 118 N GLY 17 26.682 35.070 15.751 1.00105.48 N ATOM 119 CA GLY 17 26.029 36.332 15.909 1.00105.48 C ATOM 120 C GLY 17 24.840 36.290 15.012 1.00105.48 C ATOM 121 O GLY 17 24.799 35.528 14.048 1.00105.48 O ATOM 122 N GLN 18 23.827 37.122 15.315 1.00261.95 N ATOM 123 CA GLN 18 22.629 37.102 14.536 1.00261.95 C ATOM 124 CB GLN 18 21.357 37.259 15.387 1.00261.95 C ATOM 125 CG GLN 18 20.059 37.237 14.575 1.00261.95 C ATOM 126 CD GLN 18 18.902 37.392 15.551 1.00261.95 C ATOM 127 OE1 GLN 18 18.886 36.771 16.614 1.00261.95 O ATOM 128 NE2 GLN 18 17.912 38.252 15.193 1.00261.95 N ATOM 129 C GLN 18 22.670 38.239 13.571 1.00261.95 C ATOM 130 O GLN 18 23.201 39.307 13.865 1.00261.95 O ATOM 131 N ASN 19 22.113 38.015 12.367 1.00260.92 N ATOM 132 CA ASN 19 22.052 39.058 11.389 1.00260.92 C ATOM 133 CB ASN 19 22.829 38.752 10.095 1.00260.92 C ATOM 134 CG ASN 19 22.946 40.045 9.299 1.00260.92 C ATOM 135 OD1 ASN 19 22.633 40.087 8.109 1.00260.92 O ATOM 136 ND2 ASN 19 23.416 41.130 9.970 1.00260.92 N ATOM 137 C ASN 19 20.612 39.205 11.024 1.00260.92 C ATOM 138 O ASN 19 19.844 38.246 11.090 1.00260.92 O ATOM 139 N TRP 20 20.206 40.431 10.645 1.00231.39 N ATOM 140 CA TRP 20 18.832 40.666 10.314 1.00231.39 C ATOM 141 CB TRP 20 18.506 42.158 10.139 1.00231.39 C ATOM 142 CG TRP 20 18.491 42.952 11.422 1.00231.39 C ATOM 143 CD2 TRP 20 17.309 43.562 11.963 1.00231.39 C ATOM 144 CD1 TRP 20 19.515 43.274 12.264 1.00231.39 C ATOM 145 NE1 TRP 20 19.041 44.038 13.305 1.00231.39 N ATOM 146 CE2 TRP 20 17.686 44.226 13.129 1.00231.39 C ATOM 147 CE3 TRP 20 16.017 43.570 11.521 1.00231.39 C ATOM 148 CZ2 TRP 20 16.769 44.912 13.875 1.00231.39 C ATOM 149 CZ3 TRP 20 15.095 44.261 12.276 1.00231.39 C ATOM 150 CH2 TRP 20 15.465 44.919 13.431 1.00231.39 C ATOM 151 C TRP 20 18.525 39.995 9.017 1.00231.39 C ATOM 152 O TRP 20 19.237 40.168 8.029 1.00231.39 O ATOM 153 N ALA 21 17.454 39.177 9.006 1.00294.99 N ATOM 154 CA ALA 21 17.015 38.563 7.789 1.00294.99 C ATOM 155 CB ALA 21 18.017 37.542 7.218 1.00294.99 C ATOM 156 C ALA 21 15.748 37.825 8.088 1.00294.99 C ATOM 157 O ALA 21 15.629 37.183 9.131 1.00294.99 O ATOM 158 N SER 22 14.772 37.888 7.157 1.00122.26 N ATOM 159 CA SER 22 13.521 37.202 7.297 1.00122.26 C ATOM 160 CB SER 22 13.631 35.669 7.173 1.00122.26 C ATOM 161 OG SER 22 14.019 35.306 5.855 1.00122.26 O ATOM 162 C SER 22 12.889 37.524 8.611 1.00122.26 C ATOM 163 O SER 22 13.388 38.332 9.393 1.00122.26 O ATOM 164 N LEU 23 11.707 36.925 8.853 1.00 93.00 N ATOM 165 CA LEU 23 11.069 37.099 10.120 1.00 93.00 C ATOM 166 CB LEU 23 9.541 37.256 10.041 1.00 93.00 C ATOM 167 CG LEU 23 9.096 38.543 9.321 1.00 93.00 C ATOM 168 CD1 LEU 23 9.485 39.798 10.121 1.00 93.00 C ATOM 169 CD2 LEU 23 9.612 38.575 7.874 1.00 93.00 C ATOM 170 C LEU 23 11.360 35.855 10.886 1.00 93.00 C ATOM 171 O LEU 23 10.944 34.760 10.507 1.00 93.00 O ATOM 172 N ALA 24 12.104 36.015 11.996 1.00 54.97 N ATOM 173 CA ALA 24 12.488 34.915 12.824 1.00 54.97 C ATOM 174 CB ALA 24 13.529 35.285 13.894 1.00 54.97 C ATOM 175 C ALA 24 11.261 34.460 13.522 1.00 54.97 C ATOM 176 O ALA 24 10.302 35.220 13.641 1.00 54.97 O ATOM 177 N ALA 25 11.269 33.194 13.986 1.00 92.62 N ATOM 178 CA ALA 25 10.110 32.641 14.614 1.00 92.62 C ATOM 179 CB ALA 25 10.352 31.247 15.219 1.00 92.62 C ATOM 180 C ALA 25 9.698 33.550 15.717 1.00 92.62 C ATOM 181 O ALA 25 10.376 33.690 16.733 1.00 92.62 O ATOM 182 N ASN 26 8.541 34.197 15.514 1.00 90.10 N ATOM 183 CA ASN 26 7.986 35.075 16.490 1.00 90.10 C ATOM 184 CB ASN 26 8.295 36.563 16.229 1.00 90.10 C ATOM 185 CG ASN 26 7.914 37.369 17.466 1.00 90.10 C ATOM 186 OD1 ASN 26 6.748 37.433 17.850 1.00 90.10 O ATOM 187 ND2 ASN 26 8.928 38.005 18.113 1.00 90.10 N ATOM 188 C ASN 26 6.516 34.877 16.370 1.00 90.10 C ATOM 189 O ASN 26 6.021 34.550 15.293 1.00 90.10 O ATOM 190 N GLU 27 5.774 35.030 17.480 1.00 50.90 N ATOM 191 CA GLU 27 4.363 34.860 17.347 1.00 50.90 C ATOM 192 CB GLU 27 3.691 34.130 18.525 1.00 50.90 C ATOM 193 CG GLU 27 3.980 32.630 18.589 1.00 50.90 C ATOM 194 CD GLU 27 3.160 32.049 19.734 1.00 50.90 C ATOM 195 OE1 GLU 27 2.572 32.851 20.507 1.00 50.90 O ATOM 196 OE2 GLU 27 3.105 30.795 19.847 1.00 50.90 O ATOM 197 C GLU 27 3.748 36.216 17.284 1.00 50.90 C ATOM 198 O GLU 27 3.582 36.878 18.307 1.00 50.90 O ATOM 199 N LEU 28 3.411 36.679 16.066 1.00 99.92 N ATOM 200 CA LEU 28 2.727 37.931 15.997 1.00 99.92 C ATOM 201 CB LEU 28 2.987 38.740 14.716 1.00 99.92 C ATOM 202 CG LEU 28 4.442 39.221 14.568 1.00 99.92 C ATOM 203 CD1 LEU 28 4.805 40.235 15.663 1.00 99.92 C ATOM 204 CD2 LEU 28 5.419 38.035 14.493 1.00 99.92 C ATOM 205 C LEU 28 1.275 37.605 16.076 1.00 99.92 C ATOM 206 O LEU 28 0.838 36.574 15.570 1.00 99.92 O ATOM 207 N ARG 29 0.494 38.457 16.765 1.00 87.45 N ATOM 208 CA ARG 29 -0.913 38.207 16.859 1.00 87.45 C ATOM 209 CB ARG 29 -1.287 37.389 18.108 1.00 87.45 C ATOM 210 CG ARG 29 -2.782 37.101 18.247 1.00 87.45 C ATOM 211 CD ARG 29 -3.110 36.064 19.327 1.00 87.45 C ATOM 212 NE ARG 29 -2.669 36.609 20.643 1.00 87.45 N ATOM 213 CZ ARG 29 -1.418 36.331 21.116 1.00 87.45 C ATOM 214 NH1 ARG 29 -0.574 35.541 20.390 1.00 87.45 N ATOM 215 NH2 ARG 29 -1.008 36.840 22.315 1.00 87.45 N ATOM 216 C ARG 29 -1.584 39.541 16.943 1.00 87.45 C ATOM 217 O ARG 29 -1.181 40.391 17.736 1.00 87.45 O ATOM 218 N VAL 30 -2.625 39.770 16.113 1.00 58.69 N ATOM 219 CA VAL 30 -3.258 41.057 16.173 1.00 58.69 C ATOM 220 CB VAL 30 -2.980 41.918 14.976 1.00 58.69 C ATOM 221 CG1 VAL 30 -3.780 43.227 15.116 1.00 58.69 C ATOM 222 CG2 VAL 30 -1.459 42.124 14.868 1.00 58.69 C ATOM 223 C VAL 30 -4.744 40.906 16.268 1.00 58.69 C ATOM 224 O VAL 30 -5.389 40.298 15.414 1.00 58.69 O ATOM 225 N THR 31 -5.308 41.444 17.367 1.00 56.41 N ATOM 226 CA THR 31 -6.718 41.534 17.621 1.00 56.41 C ATOM 227 CB THR 31 -7.028 41.815 19.063 1.00 56.41 C ATOM 228 OG1 THR 31 -6.486 40.794 19.888 1.00 56.41 O ATOM 229 CG2 THR 31 -8.555 41.880 19.236 1.00 56.41 C ATOM 230 C THR 31 -7.266 42.672 16.818 1.00 56.41 C ATOM 231 O THR 31 -8.440 42.703 16.456 1.00 56.41 O ATOM 232 N GLU 32 -6.397 43.650 16.516 1.00 69.56 N ATOM 233 CA GLU 32 -6.778 44.894 15.919 1.00 69.56 C ATOM 234 CB GLU 32 -5.568 45.729 15.463 1.00 69.56 C ATOM 235 CG GLU 32 -4.666 46.161 16.621 1.00 69.56 C ATOM 236 CD GLU 32 -3.504 46.964 16.049 1.00 69.56 C ATOM 237 OE1 GLU 32 -3.770 47.920 15.273 1.00 69.56 O ATOM 238 OE2 GLU 32 -2.334 46.628 16.376 1.00 69.56 O ATOM 239 C GLU 32 -7.671 44.710 14.738 1.00 69.56 C ATOM 240 O GLU 32 -7.592 43.723 14.003 1.00 69.56 O ATOM 241 N ARG 33 -8.571 45.705 14.555 1.00175.24 N ATOM 242 CA ARG 33 -9.448 45.750 13.424 1.00175.24 C ATOM 243 CB ARG 33 -10.219 47.075 13.306 1.00175.24 C ATOM 244 CG ARG 33 -9.300 48.284 13.120 1.00175.24 C ATOM 245 CD ARG 33 -10.045 49.614 13.001 1.00175.24 C ATOM 246 NE ARG 33 -9.032 50.673 12.724 1.00175.24 N ATOM 247 CZ ARG 33 -8.631 50.905 11.440 1.00175.24 C ATOM 248 NH1 ARG 33 -9.153 50.165 10.419 1.00175.24 N ATOM 249 NH2 ARG 33 -7.707 51.874 11.171 1.00175.24 N ATOM 250 C ARG 33 -8.492 45.670 12.296 1.00175.24 C ATOM 251 O ARG 33 -7.383 46.179 12.448 1.00175.24 O ATOM 252 N PRO 34 -8.946 45.153 11.178 1.00199.82 N ATOM 253 CA PRO 34 -8.100 44.617 10.133 1.00199.82 C ATOM 254 CD PRO 34 -10.224 45.610 10.658 1.00199.82 C ATOM 255 CB PRO 34 -8.817 44.911 8.821 1.00199.82 C ATOM 256 CG PRO 34 -10.291 45.079 9.224 1.00199.82 C ATOM 257 C PRO 34 -6.678 45.062 10.112 1.00199.82 C ATOM 258 O PRO 34 -6.293 45.942 9.343 1.00199.82 O ATOM 259 N PHE 35 -5.885 44.402 10.975 1.00122.17 N ATOM 260 CA PHE 35 -4.487 44.650 11.084 1.00122.17 C ATOM 261 CB PHE 35 -4.056 45.025 12.514 1.00122.17 C ATOM 262 CG PHE 35 -2.698 45.636 12.451 1.00122.17 C ATOM 263 CD1 PHE 35 -2.559 46.976 12.174 1.00122.17 C ATOM 264 CD2 PHE 35 -1.569 44.884 12.675 1.00122.17 C ATOM 265 CE1 PHE 35 -1.316 47.560 12.114 1.00122.17 C ATOM 266 CE2 PHE 35 -0.323 45.463 12.616 1.00122.17 C ATOM 267 CZ PHE 35 -0.192 46.802 12.338 1.00122.17 C ATOM 268 C PHE 35 -3.879 43.331 10.748 1.00122.17 C ATOM 269 O PHE 35 -3.860 42.416 11.570 1.00122.17 O ATOM 270 N TRP 36 -3.349 43.230 9.519 1.00189.87 N ATOM 271 CA TRP 36 -2.815 42.026 8.944 1.00189.87 C ATOM 272 CB TRP 36 -2.463 42.245 7.471 1.00189.87 C ATOM 273 CG TRP 36 -1.597 43.470 7.293 1.00189.87 C ATOM 274 CD2 TRP 36 -2.123 44.794 7.111 1.00189.87 C ATOM 275 CD1 TRP 36 -0.238 43.585 7.265 1.00189.87 C ATOM 276 NE1 TRP 36 0.117 44.900 7.076 1.00189.87 N ATOM 277 CE2 TRP 36 -1.034 45.655 6.980 1.00189.87 C ATOM 278 CE3 TRP 36 -3.408 45.252 7.056 1.00189.87 C ATOM 279 CZ2 TRP 36 -1.216 46.996 6.787 1.00189.87 C ATOM 280 CZ3 TRP 36 -3.587 46.606 6.867 1.00189.87 C ATOM 281 CH2 TRP 36 -2.512 47.460 6.735 1.00189.87 C ATOM 282 C TRP 36 -1.564 41.608 9.651 1.00189.87 C ATOM 283 O TRP 36 -0.804 42.456 10.115 1.00189.87 O ATOM 284 N ILE 37 -1.321 40.278 9.796 1.00139.43 N ATOM 285 CA ILE 37 -0.066 39.983 10.430 1.00139.43 C ATOM 286 CB ILE 37 0.296 38.575 10.850 1.00139.43 C ATOM 287 CG1 ILE 37 1.443 38.687 11.866 1.00139.43 C ATOM 288 CG2 ILE 37 0.788 37.705 9.687 1.00139.43 C ATOM 289 CD1 ILE 37 1.941 37.330 12.364 1.00139.43 C ATOM 290 C ILE 37 1.018 40.407 9.501 1.00139.43 C ATOM 291 O ILE 37 1.998 41.010 9.931 1.00139.43 O ATOM 292 N SER 38 0.882 40.085 8.196 1.00 57.93 N ATOM 293 CA SER 38 1.904 40.489 7.277 1.00 57.93 C ATOM 294 CB SER 38 2.912 39.372 6.952 1.00 57.93 C ATOM 295 OG SER 38 3.624 39.004 8.125 1.00 57.93 O ATOM 296 C SER 38 1.245 40.885 5.995 1.00 57.93 C ATOM 297 O SER 38 0.438 40.138 5.443 1.00 57.93 O ATOM 298 N SER 39 1.564 42.090 5.485 1.00 99.95 N ATOM 299 CA SER 39 1.005 42.461 4.221 1.00 99.95 C ATOM 300 CB SER 39 -0.172 43.446 4.283 1.00 99.95 C ATOM 301 OG SER 39 -1.359 42.746 4.624 1.00 99.95 O ATOM 302 C SER 39 2.071 43.073 3.377 1.00 99.95 C ATOM 303 O SER 39 2.892 43.858 3.849 1.00 99.95 O ATOM 304 N PHE 40 2.085 42.697 2.085 1.00 74.57 N ATOM 305 CA PHE 40 3.049 43.247 1.184 1.00 74.57 C ATOM 306 CB PHE 40 3.922 42.187 0.504 1.00 74.57 C ATOM 307 CG PHE 40 4.783 41.684 1.609 1.00 74.57 C ATOM 308 CD1 PHE 40 4.262 40.833 2.553 1.00 74.57 C ATOM 309 CD2 PHE 40 6.100 42.068 1.708 1.00 74.57 C ATOM 310 CE1 PHE 40 5.043 40.369 3.583 1.00 74.57 C ATOM 311 CE2 PHE 40 6.887 41.604 2.737 1.00 74.57 C ATOM 312 CZ PHE 40 6.359 40.751 3.676 1.00 74.57 C ATOM 313 C PHE 40 2.308 44.036 0.156 1.00 74.57 C ATOM 314 O PHE 40 1.546 43.498 -0.647 1.00 74.57 O ATOM 315 N ILE 41 2.564 45.355 0.160 1.00144.85 N ATOM 316 CA ILE 41 1.890 46.318 -0.658 1.00144.85 C ATOM 317 CB ILE 41 2.051 47.729 -0.180 1.00144.85 C ATOM 318 CG1 ILE 41 1.089 48.658 -0.937 1.00144.85 C ATOM 319 CG2 ILE 41 3.532 48.114 -0.326 1.00144.85 C ATOM 320 CD1 ILE 41 -0.386 48.393 -0.633 1.00144.85 C ATOM 321 C ILE 41 2.391 46.267 -2.060 1.00144.85 C ATOM 322 O ILE 41 3.545 45.933 -2.321 1.00144.85 O ATOM 323 N GLY 42 1.486 46.578 -3.008 1.00 25.61 N ATOM 324 CA GLY 42 1.819 46.582 -4.399 1.00 25.61 C ATOM 325 C GLY 42 2.901 47.588 -4.598 1.00 25.61 C ATOM 326 O GLY 42 3.834 47.359 -5.364 1.00 25.61 O ATOM 327 N ARG 43 2.803 48.749 -3.924 1.00 56.84 N ATOM 328 CA ARG 43 3.860 49.698 -4.091 1.00 56.84 C ATOM 329 CB ARG 43 3.411 51.148 -3.840 1.00 56.84 C ATOM 330 CG ARG 43 2.242 51.550 -4.743 1.00 56.84 C ATOM 331 CD ARG 43 1.818 53.014 -4.617 1.00 56.84 C ATOM 332 NE ARG 43 0.514 53.155 -5.329 1.00 56.84 N ATOM 333 CZ ARG 43 0.486 53.302 -6.685 1.00 56.84 C ATOM 334 NH1 ARG 43 1.651 53.292 -7.396 1.00 56.84 N ATOM 335 NH2 ARG 43 -0.708 53.448 -7.334 1.00 56.84 N ATOM 336 C ARG 43 4.870 49.335 -3.055 1.00 56.84 C ATOM 337 O ARG 43 4.908 49.915 -1.971 1.00 56.84 O ATOM 338 N SER 44 5.720 48.343 -3.386 1.00 38.44 N ATOM 339 CA SER 44 6.713 47.859 -2.476 1.00 38.44 C ATOM 340 CB SER 44 6.258 46.647 -1.644 1.00 38.44 C ATOM 341 OG SER 44 6.084 45.514 -2.484 1.00 38.44 O ATOM 342 C SER 44 7.856 47.389 -3.311 1.00 38.44 C ATOM 343 O SER 44 7.785 47.394 -4.538 1.00 38.44 O ATOM 344 N LYS 45 8.949 46.969 -2.650 1.00 65.23 N ATOM 345 CA LYS 45 10.114 46.535 -3.359 1.00 65.23 C ATOM 346 CB LYS 45 11.358 46.413 -2.461 1.00 65.23 C ATOM 347 CG LYS 45 11.883 47.769 -1.980 1.00 65.23 C ATOM 348 CD LYS 45 12.916 47.677 -0.854 1.00 65.23 C ATOM 349 CE LYS 45 12.296 47.600 0.543 1.00 65.23 C ATOM 350 NZ LYS 45 13.362 47.533 1.568 1.00 65.23 N ATOM 351 C LYS 45 9.833 45.200 -3.967 1.00 65.23 C ATOM 352 O LYS 45 8.946 44.473 -3.525 1.00 65.23 O TER END