####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS381_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS381_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 2 - 21 4.83 21.26 LCS_AVERAGE: 42.30 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 8 - 17 1.14 22.07 LONGEST_CONTINUOUS_SEGMENT: 10 19 - 28 1.84 17.18 LCS_AVERAGE: 17.87 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 9 - 17 0.64 22.40 LONGEST_CONTINUOUS_SEGMENT: 9 20 - 28 0.63 18.47 LCS_AVERAGE: 14.31 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 3 20 3 3 3 3 3 4 5 5 9 10 14 15 18 19 20 20 22 22 22 25 LCS_GDT V 3 V 3 4 8 20 3 4 6 8 9 10 15 15 16 16 17 18 18 19 21 22 24 25 27 28 LCS_GDT Q 4 Q 4 4 9 20 3 5 6 8 9 13 15 15 16 16 17 18 18 19 21 22 24 25 27 28 LCS_GDT G 5 G 5 5 9 20 3 5 6 9 11 13 15 15 16 16 17 18 18 19 21 22 24 25 27 28 LCS_GDT P 6 P 6 5 9 20 3 4 6 8 9 13 15 15 16 16 17 18 18 19 21 22 24 25 27 28 LCS_GDT W 7 W 7 5 9 20 3 4 5 7 8 10 15 15 16 16 17 18 18 19 21 22 24 25 27 28 LCS_GDT V 8 V 8 5 10 20 3 5 6 10 11 13 15 15 16 16 17 18 18 19 21 22 24 25 27 28 LCS_GDT G 9 G 9 9 10 20 6 8 9 10 11 13 15 15 16 16 17 18 18 19 21 23 24 25 27 28 LCS_GDT S 10 S 10 9 10 20 6 8 9 10 11 13 15 15 16 16 17 18 18 19 21 23 24 25 27 28 LCS_GDT S 11 S 11 9 10 20 6 8 9 10 11 13 15 15 16 16 17 18 18 19 21 23 24 25 27 28 LCS_GDT Y 12 Y 12 9 10 20 6 8 9 10 11 13 15 15 16 16 17 18 18 19 21 23 24 25 27 28 LCS_GDT V 13 V 13 9 10 20 6 8 9 10 11 13 15 15 16 16 17 18 18 19 21 23 24 25 27 28 LCS_GDT A 14 A 14 9 10 20 6 8 9 10 11 13 15 15 16 16 17 18 18 19 21 23 24 25 27 28 LCS_GDT E 15 E 15 9 10 20 6 8 9 10 11 13 15 15 16 16 17 18 18 19 21 23 24 25 27 28 LCS_GDT T 16 T 16 9 10 20 5 8 9 10 11 13 15 15 16 16 17 18 18 19 21 23 24 25 27 28 LCS_GDT G 17 G 17 9 10 20 4 7 9 10 11 13 15 15 16 16 17 18 18 19 21 23 24 25 27 28 LCS_GDT Q 18 Q 18 4 4 20 3 3 4 5 6 7 11 13 16 16 17 18 18 19 21 23 24 25 27 28 LCS_GDT N 19 N 19 4 10 20 3 3 4 4 7 9 10 11 11 13 17 17 18 19 21 23 24 25 26 28 LCS_GDT W 20 W 20 9 10 20 6 9 9 9 9 9 10 11 13 16 17 18 18 19 21 23 24 25 27 28 LCS_GDT A 21 A 21 9 10 20 6 9 9 9 9 9 10 11 12 13 17 17 17 19 21 23 24 25 27 28 LCS_GDT S 22 S 22 9 10 19 6 9 9 9 9 9 10 11 12 13 15 17 17 19 21 23 24 25 27 28 LCS_GDT L 23 L 23 9 10 19 6 9 9 9 9 9 10 11 12 13 17 18 18 19 21 23 24 25 27 28 LCS_GDT A 24 A 24 9 10 19 6 9 9 9 9 9 10 11 11 13 17 17 17 19 21 23 24 25 27 28 LCS_GDT A 25 A 25 9 10 19 6 9 9 9 9 9 10 11 11 13 17 17 17 18 21 23 24 24 27 28 LCS_GDT N 26 N 26 9 10 19 5 9 9 9 9 9 10 11 11 11 17 17 17 19 21 23 24 25 27 28 LCS_GDT E 27 E 27 9 10 19 5 9 9 9 9 9 10 11 11 13 17 17 17 18 21 23 24 24 26 28 LCS_GDT L 28 L 28 9 10 19 5 9 9 9 9 9 10 11 11 13 17 17 17 18 19 21 23 24 26 28 LCS_GDT R 29 R 29 5 5 19 3 4 4 5 7 8 8 11 11 13 17 17 17 18 19 21 23 24 26 28 LCS_GDT V 30 V 30 5 6 19 3 4 5 6 7 8 8 10 11 13 17 17 17 18 21 21 23 24 26 28 LCS_GDT T 31 T 31 5 6 19 3 4 5 6 7 8 8 10 11 13 17 17 17 18 21 23 24 24 26 28 LCS_GDT E 32 E 32 5 6 19 3 4 5 6 7 8 8 10 11 13 17 17 17 19 21 23 24 24 27 28 LCS_GDT R 33 R 33 5 6 19 3 4 5 6 6 8 8 10 12 13 17 17 17 19 21 23 24 25 27 28 LCS_GDT P 34 P 34 5 6 19 3 4 5 6 6 6 8 10 12 13 17 17 17 19 21 23 24 25 27 28 LCS_GDT F 35 F 35 4 6 19 3 4 5 6 6 7 8 9 12 13 17 17 17 19 21 23 24 25 27 28 LCS_GDT W 36 W 36 4 5 19 3 4 4 4 6 6 8 9 10 11 12 15 16 18 21 23 24 24 26 28 LCS_GDT I 37 I 37 4 6 15 3 4 4 4 5 6 8 9 10 11 12 14 15 18 21 21 22 23 26 27 LCS_GDT S 38 S 38 5 6 15 3 5 5 5 6 6 8 8 10 11 12 14 15 17 19 21 22 23 24 25 LCS_GDT S 39 S 39 5 6 15 4 5 5 5 6 6 8 9 10 11 12 14 15 17 19 21 22 23 24 25 LCS_GDT F 40 F 40 5 6 15 4 5 5 5 6 6 8 9 10 11 12 14 14 17 19 21 21 23 24 25 LCS_GDT I 41 I 41 5 6 15 4 5 5 5 6 6 8 9 10 11 12 14 14 17 19 21 21 23 23 24 LCS_GDT G 42 G 42 5 6 15 4 5 5 5 6 6 8 9 10 11 12 14 14 17 19 21 21 23 23 25 LCS_GDT R 43 R 43 3 6 15 3 3 3 4 5 6 8 8 10 11 12 14 14 16 19 21 21 23 24 25 LCS_GDT S 44 S 44 3 4 15 3 3 3 4 4 5 6 7 8 11 12 13 14 16 19 21 21 23 24 25 LCS_GDT K 45 K 45 3 3 14 0 3 3 3 3 4 4 6 8 9 12 13 14 16 17 18 21 23 23 24 LCS_AVERAGE LCS_A: 24.83 ( 14.31 17.87 42.30 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 9 9 10 11 13 15 15 16 16 17 18 18 19 21 23 24 25 27 28 GDT PERCENT_AT 13.64 20.45 20.45 22.73 25.00 29.55 34.09 34.09 36.36 36.36 38.64 40.91 40.91 43.18 47.73 52.27 54.55 56.82 61.36 63.64 GDT RMS_LOCAL 0.26 0.63 0.63 1.14 1.50 2.00 2.41 2.41 2.85 2.85 3.43 3.96 3.96 4.39 5.33 5.74 5.96 6.31 6.72 6.92 GDT RMS_ALL_AT 18.49 18.47 18.47 22.07 21.81 21.60 22.07 22.07 21.58 21.58 21.34 20.73 20.73 21.71 14.41 13.99 13.91 16.57 15.88 13.70 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 9.061 0 0.068 0.070 10.652 0.000 0.000 - LGA V 3 V 3 3.717 0 0.607 0.569 7.342 22.273 12.727 6.369 LGA Q 4 Q 4 2.667 0 0.627 0.822 6.203 19.545 10.505 5.555 LGA G 5 G 5 1.322 0 0.224 0.224 2.652 45.455 45.455 - LGA P 6 P 6 2.776 0 0.070 0.387 4.689 22.727 16.364 4.689 LGA W 7 W 7 3.682 0 0.427 1.232 6.854 12.273 4.156 6.507 LGA V 8 V 8 1.178 0 0.608 1.358 2.995 55.909 54.805 2.995 LGA G 9 G 9 2.600 0 0.430 0.430 4.014 24.545 24.545 - LGA S 10 S 10 2.308 0 0.190 0.176 3.077 41.364 35.152 3.077 LGA S 11 S 11 2.879 0 0.049 0.667 3.548 32.727 26.667 3.399 LGA Y 12 Y 12 1.175 0 0.079 1.196 11.237 70.000 29.848 11.237 LGA V 13 V 13 0.765 0 0.046 0.263 2.032 70.000 66.494 2.032 LGA A 14 A 14 2.307 0 0.038 0.045 2.925 35.909 34.182 - LGA E 15 E 15 2.669 0 0.063 0.955 3.008 27.727 33.939 2.054 LGA T 16 T 16 2.133 0 0.117 1.037 3.666 38.182 33.247 3.118 LGA G 17 G 17 1.566 0 0.226 0.226 3.112 36.818 36.818 - LGA Q 18 Q 18 7.290 0 0.636 1.364 11.572 0.455 0.202 11.572 LGA N 19 N 19 11.448 0 0.062 1.045 14.065 0.000 0.000 13.679 LGA W 20 W 20 10.910 0 0.616 1.094 13.013 0.000 0.000 11.874 LGA A 21 A 21 15.693 0 0.058 0.056 17.728 0.000 0.000 - LGA S 22 S 22 18.199 0 0.029 0.647 19.535 0.000 0.000 19.535 LGA L 23 L 23 13.283 0 0.044 0.843 14.674 0.000 0.000 12.484 LGA A 24 A 24 15.149 0 0.023 0.030 18.486 0.000 0.000 - LGA A 25 A 25 20.728 0 0.034 0.037 22.403 0.000 0.000 - LGA N 26 N 26 19.172 0 0.034 0.899 21.534 0.000 0.000 21.534 LGA E 27 E 27 17.425 0 0.049 1.158 20.811 0.000 0.000 11.436 LGA L 28 L 28 23.221 0 0.639 0.581 27.688 0.000 0.000 27.688 LGA R 29 R 29 24.735 0 0.204 1.397 29.065 0.000 0.000 27.734 LGA V 30 V 30 28.735 0 0.447 0.996 31.552 0.000 0.000 31.552 LGA T 31 T 31 27.390 0 0.702 0.588 29.263 0.000 0.000 29.263 LGA E 32 E 32 26.657 0 0.118 1.002 29.309 0.000 0.000 27.990 LGA R 33 R 33 22.233 0 0.113 1.452 23.749 0.000 0.000 16.428 LGA P 34 P 34 21.569 0 0.022 0.072 24.206 0.000 0.000 21.002 LGA F 35 F 35 23.808 0 0.610 1.303 26.026 0.000 0.000 15.968 LGA W 36 W 36 29.539 0 0.115 0.851 36.528 0.000 0.000 36.528 LGA I 37 I 37 29.929 0 0.667 1.469 32.099 0.000 0.000 28.246 LGA S 38 S 38 35.492 0 0.031 0.646 38.035 0.000 0.000 37.525 LGA S 39 S 39 37.312 0 0.314 0.583 38.479 0.000 0.000 36.842 LGA F 40 F 40 37.995 0 0.463 1.436 39.317 0.000 0.000 31.434 LGA I 41 I 41 41.842 0 0.612 0.479 44.925 0.000 0.000 39.717 LGA G 42 G 42 46.122 0 0.059 0.059 46.575 0.000 0.000 - LGA R 43 R 43 41.675 0 0.624 1.230 42.736 0.000 0.000 38.800 LGA S 44 S 44 36.205 0 0.677 0.735 38.151 0.000 0.000 37.057 LGA K 45 K 45 33.353 0 0.641 0.863 34.847 0.000 0.000 31.553 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 12.963 12.928 13.800 12.634 10.571 4.571 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 15 2.41 32.386 28.551 0.598 LGA_LOCAL RMSD: 2.410 Number of atoms: 15 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 22.065 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 12.963 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.440458 * X + 0.530564 * Y + 0.724223 * Z + -8.830155 Y_new = 0.099439 * X + 0.830556 * Y + -0.547986 * Z + 13.488303 Z_new = -0.892249 * X + -0.169349 * Y + -0.418583 * Z + 5.695146 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.919553 1.102303 -2.757148 [DEG: 167.2781 63.1573 -157.9729 ] ZXZ: 0.923051 2.002681 -1.758365 [DEG: 52.8869 114.7452 -100.7469 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS381_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS381_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 15 2.41 28.551 12.96 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS381_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 12 N ALA 2 10.821 34.215 3.154 1.00 0.00 N ATOM 14 CA ALA 2 10.568 34.079 4.614 1.00 0.00 C ATOM 15 CB ALA 2 11.077 32.713 5.146 1.00 0.00 C ATOM 16 C ALA 2 11.076 35.229 5.508 1.00 0.00 C ATOM 17 O ALA 2 11.955 35.993 5.095 1.00 0.00 O ATOM 18 N VAL 3 10.524 35.315 6.734 1.00 0.00 N ATOM 20 CA VAL 3 10.819 36.322 7.800 1.00 0.00 C ATOM 21 CB VAL 3 12.297 36.195 8.415 1.00 0.00 C ATOM 22 CG1 VAL 3 12.428 36.976 9.737 1.00 0.00 C ATOM 23 CG2 VAL 3 12.660 34.729 8.658 1.00 0.00 C ATOM 24 C VAL 3 10.493 37.792 7.418 1.00 0.00 C ATOM 25 O VAL 3 9.843 38.495 8.202 1.00 0.00 O ATOM 26 N GLN 4 10.942 38.230 6.233 1.00 0.00 N ATOM 28 CA GLN 4 10.718 39.598 5.722 1.00 0.00 C ATOM 29 CB GLN 4 12.034 40.220 5.226 1.00 0.00 C ATOM 30 CG GLN 4 13.045 40.533 6.324 1.00 0.00 C ATOM 31 CD GLN 4 14.323 41.145 5.781 1.00 0.00 C ATOM 32 OE1 GLN 4 15.277 40.435 5.463 1.00 0.00 O ATOM 33 NE2 GLN 4 14.349 42.469 5.676 1.00 0.00 N ATOM 36 C GLN 4 9.667 39.638 4.605 1.00 0.00 C ATOM 37 O GLN 4 8.799 40.519 4.602 1.00 0.00 O ATOM 38 N GLY 5 9.756 38.685 3.668 1.00 0.00 N ATOM 40 CA GLY 5 8.824 38.600 2.548 1.00 0.00 C ATOM 41 C GLY 5 9.388 39.135 1.231 1.00 0.00 C ATOM 42 O GLY 5 10.526 38.772 0.912 1.00 0.00 O ATOM 43 N PRO 6 8.651 39.970 0.434 1.00 0.00 N ATOM 44 CD PRO 6 9.374 40.631 -0.674 1.00 0.00 C ATOM 45 CA PRO 6 7.290 40.551 0.535 1.00 0.00 C ATOM 46 CB PRO 6 7.268 41.568 -0.615 1.00 0.00 C ATOM 47 CG PRO 6 8.688 41.972 -0.752 1.00 0.00 C ATOM 48 C PRO 6 6.128 39.537 0.397 1.00 0.00 C ATOM 49 O PRO 6 4.955 39.910 0.546 1.00 0.00 O ATOM 50 N TRP 7 6.475 38.264 0.161 1.00 0.00 N ATOM 52 CA TRP 7 5.512 37.158 -0.012 1.00 0.00 C ATOM 53 CB TRP 7 6.070 36.118 -1.009 1.00 0.00 C ATOM 54 CG TRP 7 6.281 36.609 -2.463 1.00 0.00 C ATOM 55 CD2 TRP 7 7.478 37.186 -3.032 1.00 0.00 C ATOM 56 CE2 TRP 7 7.206 37.440 -4.407 1.00 0.00 C ATOM 57 CE3 TRP 7 8.755 37.515 -2.518 1.00 0.00 C ATOM 58 CD1 TRP 7 5.370 36.544 -3.493 1.00 0.00 C ATOM 59 NE1 TRP 7 5.920 37.039 -4.650 1.00 0.00 N ATOM 61 CZ2 TRP 7 8.164 38.010 -5.282 1.00 0.00 C ATOM 62 CZ3 TRP 7 9.715 38.085 -3.392 1.00 0.00 C ATOM 63 CH2 TRP 7 9.405 38.324 -4.760 1.00 0.00 C ATOM 64 C TRP 7 5.098 36.457 1.296 1.00 0.00 C ATOM 65 O TRP 7 4.008 35.877 1.364 1.00 0.00 O ATOM 66 N VAL 8 5.950 36.578 2.334 1.00 0.00 N ATOM 68 CA VAL 8 5.800 35.993 3.702 1.00 0.00 C ATOM 69 CB VAL 8 5.180 37.007 4.768 1.00 0.00 C ATOM 70 CG1 VAL 8 6.178 38.109 5.085 1.00 0.00 C ATOM 71 CG2 VAL 8 3.846 37.621 4.290 1.00 0.00 C ATOM 72 C VAL 8 5.187 34.582 3.879 1.00 0.00 C ATOM 73 O VAL 8 4.110 34.289 3.344 1.00 0.00 O ATOM 74 N GLY 9 5.892 33.729 4.627 1.00 0.00 N ATOM 76 CA GLY 9 5.440 32.367 4.881 1.00 0.00 C ATOM 77 C GLY 9 6.432 31.559 5.699 1.00 0.00 C ATOM 78 O GLY 9 7.313 32.134 6.346 1.00 0.00 O ATOM 79 N SER 10 6.285 30.223 5.646 1.00 0.00 N ATOM 81 CA SER 10 7.111 29.205 6.347 1.00 0.00 C ATOM 82 CB SER 10 8.449 28.955 5.617 1.00 0.00 C ATOM 83 OG SER 10 9.210 30.146 5.510 1.00 0.00 O ATOM 85 C SER 10 7.339 29.378 7.866 1.00 0.00 C ATOM 86 O SER 10 6.891 28.534 8.651 1.00 0.00 O ATOM 87 N SER 11 8.030 30.460 8.260 1.00 0.00 N ATOM 89 CA SER 11 8.345 30.793 9.666 1.00 0.00 C ATOM 90 OG SER 11 10.602 31.502 9.085 1.00 0.00 O ATOM 92 C SER 11 7.126 31.192 10.518 1.00 0.00 C ATOM 93 O SER 11 7.041 30.812 11.692 1.00 0.00 O ATOM 94 CB SER 11 9.402 31.902 9.724 1.00 0.00 C ATOM 95 N TYR 12 6.194 31.945 9.911 1.00 0.00 N ATOM 97 CA TYR 12 4.955 32.428 10.556 1.00 0.00 C ATOM 98 CB TYR 12 4.282 33.519 9.687 1.00 0.00 C ATOM 99 CG TYR 12 5.079 34.813 9.471 1.00 0.00 C ATOM 100 CD1 TYR 12 4.930 35.919 10.345 1.00 0.00 C ATOM 101 CE1 TYR 12 5.640 37.132 10.130 1.00 0.00 C ATOM 102 CD2 TYR 12 5.962 34.954 8.371 1.00 0.00 C ATOM 103 CE2 TYR 12 6.677 36.165 8.148 1.00 0.00 C ATOM 104 CZ TYR 12 6.508 37.244 9.031 1.00 0.00 C ATOM 105 OH TYR 12 7.196 38.417 8.821 1.00 0.00 O ATOM 107 C TYR 12 3.941 31.314 10.881 1.00 0.00 C ATOM 108 O TYR 12 3.411 31.270 12.000 1.00 0.00 O ATOM 109 N VAL 13 3.709 30.411 9.913 1.00 0.00 N ATOM 111 CA VAL 13 2.773 29.270 10.049 1.00 0.00 C ATOM 112 CB VAL 13 2.472 28.558 8.677 1.00 0.00 C ATOM 113 CG1 VAL 13 1.154 27.762 8.741 1.00 0.00 C ATOM 114 CG2 VAL 13 2.402 29.574 7.536 1.00 0.00 C ATOM 115 C VAL 13 3.322 28.242 11.063 1.00 0.00 C ATOM 116 O VAL 13 2.550 27.683 11.852 1.00 0.00 O ATOM 117 N ALA 14 4.646 28.022 11.038 1.00 0.00 N ATOM 119 CA ALA 14 5.340 27.083 11.942 1.00 0.00 C ATOM 120 CB ALA 14 6.745 26.822 11.468 1.00 0.00 C ATOM 121 C ALA 14 5.357 27.542 13.406 1.00 0.00 C ATOM 122 O ALA 14 5.234 26.710 14.307 1.00 0.00 O ATOM 123 N GLU 15 5.491 28.859 13.626 1.00 0.00 N ATOM 125 CA GLU 15 5.520 29.470 14.974 1.00 0.00 C ATOM 126 CB GLU 15 5.933 30.949 14.876 1.00 0.00 C ATOM 127 CG GLU 15 6.823 31.456 16.020 1.00 0.00 C ATOM 128 CD GLU 15 7.195 32.919 15.867 1.00 0.00 C ATOM 129 OE1 GLU 15 6.449 33.780 16.377 1.00 0.00 O ATOM 130 OE2 GLU 15 8.237 33.207 15.239 1.00 0.00 O ATOM 131 C GLU 15 4.136 29.325 15.651 1.00 0.00 C ATOM 132 O GLU 15 4.058 28.891 16.807 1.00 0.00 O ATOM 133 N THR 16 3.066 29.656 14.909 1.00 0.00 N ATOM 135 CA THR 16 1.671 29.541 15.384 1.00 0.00 C ATOM 136 CB THR 16 0.660 30.406 14.526 1.00 0.00 C ATOM 137 OG1 THR 16 -0.667 30.267 15.049 1.00 0.00 O ATOM 139 CG2 THR 16 0.670 30.026 13.039 1.00 0.00 C ATOM 140 C THR 16 1.243 28.060 15.505 1.00 0.00 C ATOM 141 O THR 16 0.515 27.690 16.432 1.00 0.00 O ATOM 142 N GLY 17 1.734 27.239 14.564 1.00 0.00 N ATOM 144 CA GLY 17 1.455 25.805 14.515 1.00 0.00 C ATOM 145 C GLY 17 2.072 24.999 15.652 1.00 0.00 C ATOM 146 O GLY 17 1.421 24.091 16.181 1.00 0.00 O ATOM 147 N GLN 18 3.322 25.330 16.010 1.00 0.00 N ATOM 149 CA GLN 18 4.070 24.686 17.107 1.00 0.00 C ATOM 150 CB GLN 18 5.547 25.094 17.088 1.00 0.00 C ATOM 151 CG GLN 18 6.392 24.348 16.065 1.00 0.00 C ATOM 152 CD GLN 18 7.846 24.782 16.079 1.00 0.00 C ATOM 153 OE1 GLN 18 8.239 25.697 15.355 1.00 0.00 O ATOM 154 NE2 GLN 18 8.653 24.125 16.906 1.00 0.00 N ATOM 157 C GLN 18 3.439 25.037 18.463 1.00 0.00 C ATOM 158 O GLN 18 3.400 24.197 19.368 1.00 0.00 O ATOM 159 N ASN 19 2.956 26.284 18.576 1.00 0.00 N ATOM 161 CA ASN 19 2.278 26.824 19.773 1.00 0.00 C ATOM 162 CB ASN 19 2.090 28.347 19.619 1.00 0.00 C ATOM 163 CG ASN 19 1.994 29.079 20.960 1.00 0.00 C ATOM 164 OD1 ASN 19 3.002 29.522 21.513 1.00 0.00 O ATOM 165 ND2 ASN 19 0.775 29.219 21.474 1.00 0.00 N ATOM 168 C ASN 19 0.911 26.116 19.927 1.00 0.00 C ATOM 169 O ASN 19 0.520 25.744 21.039 1.00 0.00 O ATOM 170 N TRP 20 0.233 25.912 18.786 1.00 0.00 N ATOM 172 CA TRP 20 -1.082 25.247 18.674 1.00 0.00 C ATOM 173 CB TRP 20 -1.648 25.457 17.245 1.00 0.00 C ATOM 174 CG TRP 20 -3.196 25.517 17.115 1.00 0.00 C ATOM 175 CD2 TRP 20 -4.113 24.408 16.966 1.00 0.00 C ATOM 176 CE2 TRP 20 -5.420 24.962 16.849 1.00 0.00 C ATOM 177 CE3 TRP 20 -3.961 23.003 16.920 1.00 0.00 C ATOM 178 CD1 TRP 20 -3.972 26.653 17.081 1.00 0.00 C ATOM 179 NE1 TRP 20 -5.296 26.324 16.923 1.00 0.00 N ATOM 181 CZ2 TRP 20 -6.576 24.159 16.687 1.00 0.00 C ATOM 182 CZ3 TRP 20 -5.117 22.198 16.758 1.00 0.00 C ATOM 183 CH2 TRP 20 -6.407 22.788 16.644 1.00 0.00 C ATOM 184 C TRP 20 -0.968 23.737 18.991 1.00 0.00 C ATOM 185 O TRP 20 -1.820 23.177 19.691 1.00 0.00 O ATOM 186 N ALA 21 0.108 23.120 18.477 1.00 0.00 N ATOM 188 CA ALA 21 0.444 21.691 18.638 1.00 0.00 C ATOM 189 CB ALA 21 1.562 21.311 17.658 1.00 0.00 C ATOM 190 C ALA 21 0.844 21.318 20.077 1.00 0.00 C ATOM 191 O ALA 21 0.395 20.291 20.601 1.00 0.00 O ATOM 192 N SER 22 1.658 22.180 20.705 1.00 0.00 N ATOM 194 CA SER 22 2.163 22.016 22.084 1.00 0.00 C ATOM 195 CB SER 22 3.283 23.032 22.358 1.00 0.00 C ATOM 196 OG SER 22 3.931 22.782 23.595 1.00 0.00 O ATOM 198 C SER 22 1.042 22.145 23.138 1.00 0.00 C ATOM 199 O SER 22 0.982 21.340 24.075 1.00 0.00 O ATOM 200 N LEU 23 0.165 23.146 22.960 1.00 0.00 N ATOM 202 CA LEU 23 -0.983 23.415 23.849 1.00 0.00 C ATOM 203 CB LEU 23 -1.574 24.823 23.575 1.00 0.00 C ATOM 204 CG LEU 23 -1.171 26.203 24.176 1.00 0.00 C ATOM 205 CD1 LEU 23 -1.658 26.362 25.627 1.00 0.00 C ATOM 206 CD2 LEU 23 0.327 26.542 24.053 1.00 0.00 C ATOM 207 C LEU 23 -2.089 22.347 23.783 1.00 0.00 C ATOM 208 O LEU 23 -2.614 21.945 24.825 1.00 0.00 O ATOM 209 N ALA 24 -2.409 21.883 22.564 1.00 0.00 N ATOM 211 CA ALA 24 -3.435 20.847 22.308 1.00 0.00 C ATOM 212 CB ALA 24 -3.736 20.756 20.820 1.00 0.00 C ATOM 213 C ALA 24 -3.016 19.469 22.838 1.00 0.00 C ATOM 214 O ALA 24 -3.853 18.720 23.352 1.00 0.00 O ATOM 215 N ALA 25 -1.721 19.158 22.692 1.00 0.00 N ATOM 217 CA ALA 25 -1.101 17.895 23.133 1.00 0.00 C ATOM 218 CB ALA 25 0.270 17.755 22.514 1.00 0.00 C ATOM 219 C ALA 25 -1.015 17.732 24.660 1.00 0.00 C ATOM 220 O ALA 25 -1.328 16.655 25.184 1.00 0.00 O ATOM 221 N ASN 26 -0.589 18.799 25.355 1.00 0.00 N ATOM 223 CA ASN 26 -0.449 18.837 26.828 1.00 0.00 C ATOM 224 CB ASN 26 0.331 20.098 27.253 1.00 0.00 C ATOM 225 CG ASN 26 1.094 19.916 28.567 1.00 0.00 C ATOM 226 OD1 ASN 26 2.258 19.512 28.573 1.00 0.00 O ATOM 227 ND2 ASN 26 0.440 20.234 29.682 1.00 0.00 N ATOM 230 C ASN 26 -1.837 18.789 27.509 1.00 0.00 C ATOM 231 O ASN 26 -2.032 18.034 28.469 1.00 0.00 O ATOM 232 N GLU 27 -2.772 19.604 27.000 1.00 0.00 N ATOM 234 CA GLU 27 -4.168 19.704 27.480 1.00 0.00 C ATOM 235 CG GLU 27 -4.349 22.274 27.524 1.00 0.00 C ATOM 236 CD GLU 27 -5.020 23.491 26.917 1.00 0.00 C ATOM 237 OE1 GLU 27 -6.067 23.922 27.447 1.00 0.00 O ATOM 238 OE2 GLU 27 -4.500 24.020 25.912 1.00 0.00 O ATOM 239 C GLU 27 -5.020 18.462 27.157 1.00 0.00 C ATOM 240 O GLU 27 -5.881 18.073 27.957 1.00 0.00 O ATOM 241 CB GLU 27 -4.843 20.962 26.918 1.00 0.00 C ATOM 242 N LEU 28 -4.762 17.866 25.977 1.00 0.00 N ATOM 244 CA LEU 28 -5.435 16.666 25.398 1.00 0.00 C ATOM 245 CB LEU 28 -5.440 15.444 26.352 1.00 0.00 C ATOM 246 CG LEU 28 -4.129 14.756 26.777 1.00 0.00 C ATOM 247 CD1 LEU 28 -4.176 14.464 28.269 1.00 0.00 C ATOM 248 CD2 LEU 28 -3.873 13.464 25.984 1.00 0.00 C ATOM 249 C LEU 28 -6.860 16.935 24.900 1.00 0.00 C ATOM 250 O LEU 28 -7.522 17.852 25.398 1.00 0.00 O ATOM 251 N ARG 29 -7.317 16.128 23.932 1.00 0.00 N ATOM 253 CA ARG 29 -8.660 16.240 23.338 1.00 0.00 C ATOM 254 CB ARG 29 -8.671 15.693 21.903 1.00 0.00 C ATOM 255 CG ARG 29 -7.987 16.588 20.877 1.00 0.00 C ATOM 256 CD ARG 29 -8.153 16.037 19.469 1.00 0.00 C ATOM 257 NE ARG 29 -7.578 16.927 18.457 1.00 0.00 N ATOM 259 CZ ARG 29 -7.790 16.834 17.145 1.00 0.00 C ATOM 260 NH1 ARG 29 -7.210 17.702 16.326 1.00 0.00 N ATOM 263 NH2 ARG 29 -8.574 15.888 16.638 1.00 0.00 N ATOM 266 C ARG 29 -9.757 15.580 24.200 1.00 0.00 C ATOM 267 O ARG 29 -10.295 14.519 23.851 1.00 0.00 O ATOM 268 N VAL 30 -10.039 16.211 25.350 1.00 0.00 N ATOM 270 CA VAL 30 -11.056 15.745 26.310 1.00 0.00 C ATOM 271 CB VAL 30 -10.458 15.485 27.757 1.00 0.00 C ATOM 272 CG1 VAL 30 -9.573 14.255 27.736 1.00 0.00 C ATOM 273 CG2 VAL 30 -9.637 16.683 28.269 1.00 0.00 C ATOM 274 C VAL 30 -12.337 16.614 26.321 1.00 0.00 C ATOM 275 O VAL 30 -13.068 16.607 25.329 1.00 0.00 O ATOM 276 N THR 31 -12.578 17.368 27.407 1.00 0.00 N ATOM 278 CA THR 31 -13.758 18.236 27.582 1.00 0.00 C ATOM 279 CB THR 31 -14.310 18.143 29.046 1.00 0.00 C ATOM 280 OG1 THR 31 -13.268 18.459 29.977 1.00 0.00 O ATOM 282 CG2 THR 31 -14.834 16.740 29.339 1.00 0.00 C ATOM 283 C THR 31 -13.429 19.702 27.228 1.00 0.00 C ATOM 284 O THR 31 -12.258 20.095 27.285 1.00 0.00 O ATOM 285 N GLU 32 -14.459 20.481 26.839 1.00 0.00 N ATOM 287 CA GLU 32 -14.391 21.921 26.447 1.00 0.00 C ATOM 288 CB GLU 32 -13.777 22.796 27.564 1.00 0.00 C ATOM 289 CG GLU 32 -14.628 22.910 28.825 1.00 0.00 C ATOM 290 CD GLU 32 -13.984 23.778 29.891 1.00 0.00 C ATOM 291 OE1 GLU 32 -13.233 23.235 30.728 1.00 0.00 O ATOM 292 OE2 GLU 32 -14.232 25.002 29.894 1.00 0.00 O ATOM 293 C GLU 32 -13.680 22.200 25.105 1.00 0.00 C ATOM 294 O GLU 32 -13.066 21.292 24.543 1.00 0.00 O ATOM 295 N ARG 33 -13.808 23.436 24.591 1.00 0.00 N ATOM 297 CA ARG 33 -13.191 23.905 23.325 1.00 0.00 C ATOM 298 CB ARG 33 -14.231 23.964 22.188 1.00 0.00 C ATOM 299 CG ARG 33 -14.696 22.604 21.660 1.00 0.00 C ATOM 300 CD ARG 33 -15.724 22.739 20.539 1.00 0.00 C ATOM 301 NE ARG 33 -15.150 23.273 19.299 1.00 0.00 N ATOM 303 CZ ARG 33 -15.824 23.490 18.171 1.00 0.00 C ATOM 304 NH1 ARG 33 -17.125 23.225 18.084 1.00 0.00 N ATOM 307 NH2 ARG 33 -15.190 23.977 17.113 1.00 0.00 N ATOM 310 C ARG 33 -12.613 25.328 23.555 1.00 0.00 C ATOM 311 O ARG 33 -13.122 26.033 24.435 1.00 0.00 O ATOM 312 N PRO 34 -11.541 25.771 22.807 1.00 0.00 N ATOM 313 CD PRO 34 -11.312 27.226 22.945 1.00 0.00 C ATOM 314 CA PRO 34 -10.660 25.256 21.728 1.00 0.00 C ATOM 315 CB PRO 34 -9.937 26.522 21.242 1.00 0.00 C ATOM 316 CG PRO 34 -10.883 27.615 21.554 1.00 0.00 C ATOM 317 C PRO 34 -9.640 24.188 22.181 1.00 0.00 C ATOM 318 O PRO 34 -9.495 23.960 23.382 1.00 0.00 O ATOM 319 N PHE 35 -8.901 23.606 21.215 1.00 0.00 N ATOM 321 CA PHE 35 -7.864 22.542 21.375 1.00 0.00 C ATOM 322 CB PHE 35 -6.737 22.911 22.392 1.00 0.00 C ATOM 323 CG PHE 35 -5.976 24.197 22.067 1.00 0.00 C ATOM 324 CD1 PHE 35 -4.851 24.178 21.206 1.00 0.00 C ATOM 325 CD2 PHE 35 -6.356 25.428 22.653 1.00 0.00 C ATOM 326 CE1 PHE 35 -4.117 25.365 20.932 1.00 0.00 C ATOM 327 CE2 PHE 35 -5.631 26.623 22.388 1.00 0.00 C ATOM 328 CZ PHE 35 -4.508 26.591 21.525 1.00 0.00 C ATOM 329 C PHE 35 -8.428 21.150 21.701 1.00 0.00 C ATOM 330 O PHE 35 -7.989 20.153 21.113 1.00 0.00 O ATOM 331 N TRP 36 -9.390 21.097 22.633 1.00 0.00 N ATOM 333 CA TRP 36 -10.050 19.850 23.057 1.00 0.00 C ATOM 334 CB TRP 36 -10.026 19.663 24.604 1.00 0.00 C ATOM 335 CG TRP 36 -9.814 20.900 25.549 1.00 0.00 C ATOM 336 CD2 TRP 36 -9.122 20.911 26.818 1.00 0.00 C ATOM 337 CE2 TRP 36 -9.235 22.229 27.347 1.00 0.00 C ATOM 338 CE3 TRP 36 -8.422 19.937 27.566 1.00 0.00 C ATOM 339 CD1 TRP 36 -10.291 22.179 25.380 1.00 0.00 C ATOM 340 NE1 TRP 36 -9.950 22.970 26.446 1.00 0.00 N ATOM 342 CZ2 TRP 36 -8.673 22.603 28.591 1.00 0.00 C ATOM 343 CZ3 TRP 36 -7.860 20.309 28.814 1.00 0.00 C ATOM 344 CH2 TRP 36 -7.994 21.636 29.308 1.00 0.00 C ATOM 345 C TRP 36 -11.487 19.717 22.516 1.00 0.00 C ATOM 346 O TRP 36 -12.082 20.717 22.101 1.00 0.00 O ATOM 347 N ILE 37 -12.018 18.483 22.517 1.00 0.00 N ATOM 349 CA ILE 37 -13.387 18.147 22.048 1.00 0.00 C ATOM 350 CB ILE 37 -13.487 16.617 21.589 1.00 0.00 C ATOM 351 CG2 ILE 37 -14.833 16.355 20.839 1.00 0.00 C ATOM 352 CG1 ILE 37 -12.323 16.273 20.634 1.00 0.00 C ATOM 353 CD1 ILE 37 -11.960 14.779 20.517 1.00 0.00 C ATOM 354 C ILE 37 -14.369 18.461 23.213 1.00 0.00 C ATOM 355 O ILE 37 -13.917 18.780 24.315 1.00 0.00 O ATOM 356 N SER 38 -15.683 18.417 22.947 1.00 0.00 N ATOM 358 CA SER 38 -16.738 18.678 23.948 1.00 0.00 C ATOM 359 CB SER 38 -18.049 19.040 23.243 1.00 0.00 C ATOM 360 OG SER 38 -19.036 19.483 24.161 1.00 0.00 O ATOM 362 C SER 38 -16.945 17.438 24.839 1.00 0.00 C ATOM 363 O SER 38 -17.527 17.532 25.928 1.00 0.00 O ATOM 364 N SER 39 -16.419 16.296 24.364 1.00 0.00 N ATOM 366 CA SER 39 -16.467 14.959 25.004 1.00 0.00 C ATOM 367 CB SER 39 -15.463 14.853 26.176 1.00 0.00 C ATOM 368 OG SER 39 -15.306 13.523 26.637 1.00 0.00 O ATOM 370 C SER 39 -17.854 14.452 25.428 1.00 0.00 C ATOM 371 O SER 39 -18.408 13.564 24.772 1.00 0.00 O ATOM 372 N PHE 40 -18.420 15.045 26.487 1.00 0.00 N ATOM 374 CA PHE 40 -19.726 14.655 27.036 1.00 0.00 C ATOM 375 CB PHE 40 -19.842 15.114 28.520 1.00 0.00 C ATOM 376 CG PHE 40 -19.640 16.618 28.761 1.00 0.00 C ATOM 377 CD1 PHE 40 -20.750 17.488 28.872 1.00 0.00 C ATOM 378 CD2 PHE 40 -18.343 17.160 28.924 1.00 0.00 C ATOM 379 CE1 PHE 40 -20.576 18.874 29.141 1.00 0.00 C ATOM 380 CE2 PHE 40 -18.152 18.544 29.194 1.00 0.00 C ATOM 381 CZ PHE 40 -19.273 19.403 29.301 1.00 0.00 C ATOM 382 C PHE 40 -20.960 15.011 26.162 1.00 0.00 C ATOM 383 O PHE 40 -21.784 15.867 26.516 1.00 0.00 O ATOM 384 N ILE 41 -21.037 14.332 25.008 1.00 0.00 N ATOM 386 CA ILE 41 -22.107 14.481 24.001 1.00 0.00 C ATOM 387 CB ILE 41 -21.513 14.783 22.555 1.00 0.00 C ATOM 388 CG2 ILE 41 -22.666 15.063 21.538 1.00 0.00 C ATOM 389 CG1 ILE 41 -20.579 16.010 22.611 1.00 0.00 C ATOM 390 CD1 ILE 41 -19.550 16.129 21.468 1.00 0.00 C ATOM 391 C ILE 41 -22.924 13.169 23.996 1.00 0.00 C ATOM 392 O ILE 41 -24.135 13.187 23.745 1.00 0.00 O ATOM 393 N GLY 42 -22.246 12.056 24.296 1.00 0.00 N ATOM 395 CA GLY 42 -22.874 10.741 24.325 1.00 0.00 C ATOM 396 C GLY 42 -22.264 9.810 23.292 1.00 0.00 C ATOM 397 O GLY 42 -22.473 8.591 23.351 1.00 0.00 O ATOM 398 N ARG 43 -21.514 10.398 22.351 1.00 0.00 N ATOM 400 CA ARG 43 -20.841 9.681 21.259 1.00 0.00 C ATOM 401 CB ARG 43 -21.294 10.223 19.892 1.00 0.00 C ATOM 402 CG ARG 43 -22.747 9.912 19.529 1.00 0.00 C ATOM 403 CD ARG 43 -23.137 10.476 18.164 1.00 0.00 C ATOM 404 NE ARG 43 -23.215 11.941 18.154 1.00 0.00 N ATOM 406 CZ ARG 43 -23.534 12.686 17.095 1.00 0.00 C ATOM 407 NH1 ARG 43 -23.815 12.129 15.920 1.00 0.00 N ATOM 410 NH2 ARG 43 -23.571 14.006 17.212 1.00 0.00 N ATOM 413 C ARG 43 -19.314 9.795 21.356 1.00 0.00 C ATOM 414 O ARG 43 -18.603 8.837 21.025 1.00 0.00 O ATOM 415 N SER 44 -18.829 10.950 21.832 1.00 0.00 N ATOM 417 CA SER 44 -17.392 11.244 21.961 1.00 0.00 C ATOM 418 CB SER 44 -17.106 12.689 21.533 1.00 0.00 C ATOM 419 OG SER 44 -17.898 13.609 22.259 1.00 0.00 O ATOM 421 C SER 44 -16.710 10.942 23.308 1.00 0.00 C ATOM 422 O SER 44 -15.534 10.563 23.309 1.00 0.00 O ATOM 423 N LYS 45 -17.439 11.066 24.430 1.00 0.00 N ATOM 425 CA LYS 45 -16.890 10.815 25.789 1.00 0.00 C ATOM 426 CG LYS 45 -19.341 10.778 26.779 1.00 0.00 C ATOM 427 CD LYS 45 -20.081 10.975 28.101 1.00 0.00 C ATOM 428 CE LYS 45 -21.573 10.695 27.982 1.00 0.00 C ATOM 429 NZ LYS 45 -22.310 11.792 27.293 1.00 0.00 N ATOM 433 C LYS 45 -16.347 9.393 26.035 1.00 0.00 C ATOM 434 O LYS 45 -15.310 9.230 26.691 1.00 0.00 O ATOM 435 CB LYS 45 -17.871 11.237 26.905 1.00 0.00 C TER END