####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS401_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS401_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 2 - 24 4.93 14.65 LCS_AVERAGE: 45.25 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 1.57 21.27 LCS_AVERAGE: 18.49 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 10 - 17 0.80 21.75 LONGEST_CONTINUOUS_SEGMENT: 8 20 - 27 0.53 21.06 LCS_AVERAGE: 12.96 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 23 3 3 4 6 6 7 9 11 13 15 18 19 20 22 22 25 25 27 29 29 LCS_GDT V 3 V 3 5 6 23 3 3 5 6 6 8 9 13 16 16 18 19 20 22 24 25 26 27 29 29 LCS_GDT Q 4 Q 4 5 6 23 3 3 5 6 8 8 10 14 16 16 18 19 20 22 24 25 26 27 29 29 LCS_GDT G 5 G 5 5 6 23 3 3 5 6 8 8 10 14 16 16 18 19 20 22 24 25 26 27 29 29 LCS_GDT P 6 P 6 5 6 23 3 3 5 6 8 8 10 14 16 16 18 19 20 22 24 25 26 27 29 29 LCS_GDT W 7 W 7 5 6 23 4 4 5 6 8 8 10 14 16 16 18 19 20 22 24 25 26 27 29 29 LCS_GDT V 8 V 8 4 5 23 4 4 4 5 6 7 10 14 16 16 18 19 20 22 24 25 26 27 29 29 LCS_GDT G 9 G 9 4 9 23 4 4 4 5 6 8 10 13 16 16 18 19 20 22 24 25 26 27 29 29 LCS_GDT S 10 S 10 8 9 23 4 7 8 8 8 8 10 14 16 16 18 19 20 22 24 25 26 27 29 29 LCS_GDT S 11 S 11 8 9 23 4 7 8 8 8 8 10 14 16 16 18 19 20 22 24 25 26 27 29 29 LCS_GDT Y 12 Y 12 8 9 23 4 7 8 8 8 8 10 14 16 16 18 19 20 22 24 25 26 27 29 29 LCS_GDT V 13 V 13 8 9 23 4 7 8 8 8 8 10 14 16 16 18 19 20 22 24 25 26 27 29 29 LCS_GDT A 14 A 14 8 9 23 4 7 8 8 8 8 10 14 16 16 18 19 20 22 24 25 26 27 29 29 LCS_GDT E 15 E 15 8 9 23 4 7 8 8 8 8 10 14 16 16 18 19 20 22 24 25 26 27 29 29 LCS_GDT T 16 T 16 8 9 23 4 7 8 8 8 8 10 14 16 16 18 19 20 22 24 25 26 27 29 29 LCS_GDT G 17 G 17 8 9 23 4 6 8 8 8 8 10 13 16 16 17 19 20 22 24 25 26 27 29 29 LCS_GDT Q 18 Q 18 4 4 23 3 3 4 4 5 8 10 14 16 16 18 19 20 22 24 25 26 27 29 29 LCS_GDT N 19 N 19 4 9 23 3 3 4 6 7 7 9 11 13 14 15 19 20 22 24 25 26 27 29 29 LCS_GDT W 20 W 20 8 10 23 5 8 8 8 9 10 10 14 16 16 18 19 20 22 24 25 26 27 29 29 LCS_GDT A 21 A 21 8 10 23 5 8 8 8 9 10 10 10 11 16 17 19 20 22 24 25 26 27 29 29 LCS_GDT S 22 S 22 8 10 23 6 8 8 8 9 10 10 10 11 12 15 16 20 22 24 25 26 27 29 29 LCS_GDT L 23 L 23 8 10 23 6 8 8 8 9 10 10 12 16 16 18 19 20 22 24 25 26 27 29 29 LCS_GDT A 24 A 24 8 10 23 6 8 8 8 9 10 10 11 13 14 14 16 18 21 24 25 26 27 29 29 LCS_GDT A 25 A 25 8 10 18 6 8 8 8 9 10 10 10 11 13 14 15 16 19 22 23 26 27 29 29 LCS_GDT N 26 N 26 8 10 18 6 8 8 8 9 10 10 10 13 14 14 16 18 21 24 25 26 27 29 29 LCS_GDT E 27 E 27 8 10 18 6 8 8 8 9 10 10 11 13 14 14 15 16 17 18 23 25 26 28 28 LCS_GDT L 28 L 28 4 10 18 4 4 7 8 9 10 10 11 12 14 14 15 16 16 17 18 19 23 24 24 LCS_GDT R 29 R 29 4 10 18 4 4 7 8 9 10 10 11 13 14 14 15 16 18 20 23 25 25 28 29 LCS_GDT V 30 V 30 4 6 18 3 3 4 6 7 7 9 11 13 14 14 16 17 21 22 24 26 27 29 29 LCS_GDT T 31 T 31 4 6 18 3 3 4 6 7 7 9 11 13 14 14 16 18 21 24 25 26 27 29 29 LCS_GDT E 32 E 32 4 6 18 3 3 4 5 6 7 9 11 13 14 14 16 17 19 22 23 25 27 29 29 LCS_GDT R 33 R 33 4 6 18 3 3 4 5 5 6 9 11 13 14 14 15 16 19 20 23 25 26 29 29 LCS_GDT P 34 P 34 3 6 18 2 3 4 5 5 6 9 11 13 14 14 15 16 16 18 21 21 23 25 26 LCS_GDT F 35 F 35 3 5 17 2 3 3 5 6 8 9 11 11 12 13 13 15 15 16 21 21 23 24 26 LCS_GDT W 36 W 36 5 9 15 4 4 6 7 9 10 10 11 11 12 13 13 14 14 16 21 21 23 24 26 LCS_GDT I 37 I 37 5 9 15 4 4 6 7 9 10 10 11 11 12 13 13 14 14 18 20 21 23 24 26 LCS_GDT S 38 S 38 5 9 15 4 4 6 7 9 10 10 11 11 11 12 13 14 14 16 17 21 23 24 26 LCS_GDT S 39 S 39 5 9 15 4 4 6 7 9 10 10 11 11 12 13 13 14 14 16 17 18 23 24 26 LCS_GDT F 40 F 40 5 9 15 4 4 6 7 9 10 10 11 11 12 13 13 14 14 16 17 17 19 24 26 LCS_GDT I 41 I 41 5 9 15 4 4 6 7 9 10 10 11 11 12 13 13 14 14 16 17 20 23 24 26 LCS_GDT G 42 G 42 5 9 15 3 4 5 7 9 10 10 11 11 12 13 13 14 14 15 17 17 19 20 23 LCS_GDT R 43 R 43 5 9 15 1 3 5 7 9 10 10 11 11 12 13 13 13 14 14 15 15 16 18 19 LCS_GDT S 44 S 44 5 9 15 0 4 5 7 9 10 10 11 11 11 13 13 13 14 14 15 15 15 15 15 LCS_GDT K 45 K 45 3 7 15 0 0 4 6 8 10 10 11 11 11 12 12 13 14 14 15 15 15 15 15 LCS_AVERAGE LCS_A: 25.57 ( 12.96 18.49 45.25 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 8 8 8 9 10 10 14 16 16 18 19 20 22 24 25 26 27 29 29 GDT PERCENT_AT 13.64 18.18 18.18 18.18 20.45 22.73 22.73 31.82 36.36 36.36 40.91 43.18 45.45 50.00 54.55 56.82 59.09 61.36 65.91 65.91 GDT RMS_LOCAL 0.23 0.53 0.53 0.53 1.23 1.57 1.57 3.12 3.28 3.28 3.74 3.87 4.07 4.60 5.42 5.50 5.88 5.98 6.45 6.45 GDT RMS_ALL_AT 21.52 21.06 21.06 21.06 21.05 21.27 21.27 16.80 16.35 16.35 15.69 15.78 15.82 14.96 13.74 13.86 13.36 13.45 13.15 13.15 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 8.058 0 0.237 0.332 9.238 0.000 0.000 - LGA V 3 V 3 4.715 0 0.070 1.078 6.218 7.727 4.675 5.759 LGA Q 4 Q 4 0.749 0 0.075 1.057 4.916 55.909 49.495 1.669 LGA G 5 G 5 2.130 0 0.142 0.142 2.646 49.545 49.545 - LGA P 6 P 6 0.917 0 0.290 0.527 2.401 73.636 64.675 2.335 LGA W 7 W 7 3.056 0 0.521 0.417 13.766 39.545 11.299 13.766 LGA V 8 V 8 4.385 0 0.030 0.321 8.632 11.364 6.494 8.632 LGA G 9 G 9 6.056 0 0.554 0.554 7.126 1.364 1.364 - LGA S 10 S 10 4.182 0 0.615 0.858 6.013 30.000 20.000 6.013 LGA S 11 S 11 3.335 0 0.084 0.668 5.487 22.727 15.455 4.603 LGA Y 12 Y 12 3.209 0 0.021 1.159 16.100 33.182 11.212 16.100 LGA V 13 V 13 3.350 0 0.046 0.092 6.110 20.909 12.208 6.110 LGA A 14 A 14 2.999 0 0.084 0.087 4.641 24.545 23.273 - LGA E 15 E 15 3.609 0 0.057 1.129 5.041 12.273 10.707 3.148 LGA T 16 T 16 3.561 0 0.177 0.200 5.007 10.000 16.364 3.303 LGA G 17 G 17 5.497 0 0.219 0.219 5.497 7.727 7.727 - LGA Q 18 Q 18 1.842 0 0.628 1.396 6.193 33.636 15.556 6.193 LGA N 19 N 19 6.614 0 0.034 1.398 10.796 1.364 0.682 10.368 LGA W 20 W 20 3.717 0 0.649 1.142 10.746 4.545 4.156 10.411 LGA A 21 A 21 9.057 0 0.059 0.055 11.792 0.000 0.000 - LGA S 22 S 22 10.796 0 0.031 0.072 11.439 0.000 0.000 9.710 LGA L 23 L 23 5.880 0 0.039 0.255 9.402 0.000 10.455 3.493 LGA A 24 A 24 11.193 0 0.057 0.074 15.417 0.000 0.000 - LGA A 25 A 25 16.232 0 0.145 0.141 18.262 0.000 0.000 - LGA N 26 N 26 13.658 0 0.186 0.720 15.852 0.000 0.000 11.806 LGA E 27 E 27 16.841 0 0.063 1.101 20.825 0.000 0.000 15.174 LGA L 28 L 28 22.945 0 0.242 1.398 27.448 0.000 0.000 26.539 LGA R 29 R 29 20.705 0 0.370 1.061 21.309 0.000 0.000 21.309 LGA V 30 V 30 17.888 0 0.634 0.611 18.714 0.000 0.000 15.909 LGA T 31 T 31 18.525 0 0.197 1.151 22.258 0.000 0.000 22.258 LGA E 32 E 32 19.477 0 0.029 1.065 26.555 0.000 0.000 26.555 LGA R 33 R 33 14.385 0 0.113 0.858 16.143 0.000 0.000 8.629 LGA P 34 P 34 16.846 0 0.127 0.126 17.544 0.000 0.000 17.001 LGA F 35 F 35 20.356 0 0.692 1.249 24.582 0.000 0.000 24.113 LGA W 36 W 36 21.718 0 0.659 0.441 27.578 0.000 0.000 27.578 LGA I 37 I 37 20.788 0 0.153 0.861 22.411 0.000 0.000 18.815 LGA S 38 S 38 25.962 0 0.073 0.619 27.861 0.000 0.000 27.000 LGA S 39 S 39 25.085 0 0.232 0.739 25.085 0.000 0.000 24.521 LGA F 40 F 40 23.186 0 0.055 1.127 24.638 0.000 0.000 15.754 LGA I 41 I 41 25.739 0 0.640 1.050 27.527 0.000 0.000 27.361 LGA G 42 G 42 31.913 0 0.634 0.634 31.963 0.000 0.000 - LGA R 43 R 43 32.650 0 0.544 0.983 33.456 0.000 0.000 32.763 LGA S 44 S 44 34.159 0 0.652 0.729 37.350 0.000 0.000 37.350 LGA K 45 K 45 37.764 0 0.668 0.925 43.125 0.000 0.000 42.258 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 11.618 11.480 12.689 10.000 7.621 4.156 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 14 3.12 31.250 27.390 0.434 LGA_LOCAL RMSD: 3.123 Number of atoms: 14 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 16.797 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 11.618 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.462975 * X + -0.811448 * Y + -0.356660 * Z + -85.912270 Y_new = 0.872183 * X + -0.345347 * Y + -0.346458 * Z + -235.979050 Z_new = 0.157961 * X + -0.471474 * Y + 0.867618 * Z + -132.969574 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.058798 -0.158625 -0.497771 [DEG: 117.9604 -9.0886 -28.5202 ] ZXZ: -0.799907 0.520405 2.818310 [DEG: -45.8313 29.8170 161.4772 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS401_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS401_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 14 3.12 27.390 11.62 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS401_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 REFINED PARENT N/A ATOM 9 N ALA 2 10.901 44.156 11.394 1.00 14.90 ATOM 10 CA ALA 2 9.561 43.842 10.865 1.00 14.90 ATOM 11 C ALA 2 9.423 42.373 10.383 1.00 14.90 ATOM 12 O ALA 2 9.920 41.457 11.034 1.00 14.90 ATOM 13 CB ALA 2 9.257 44.898 9.786 1.00 15.20 ATOM 14 N VAL 3 8.687 42.133 9.290 1.00 13.20 ATOM 15 CA VAL 3 8.348 40.809 8.718 1.00 13.20 ATOM 16 C VAL 3 9.486 40.176 7.889 1.00 13.20 ATOM 17 O VAL 3 10.263 40.897 7.266 1.00 13.20 ATOM 18 CB VAL 3 7.063 40.958 7.871 1.00 12.70 ATOM 19 CG1 VAL 3 7.252 41.858 6.638 1.00 12.70 ATOM 20 CG2 VAL 3 6.506 39.608 7.421 1.00 12.70 ATOM 21 N GLN 4 9.553 38.833 7.838 1.00 14.80 ATOM 22 CA GLN 4 10.428 38.082 6.913 1.00 14.80 ATOM 23 C GLN 4 10.094 38.316 5.418 1.00 14.80 ATOM 24 O GLN 4 8.993 38.749 5.065 1.00 14.80 ATOM 25 CB GLN 4 10.433 36.581 7.259 1.00 15.50 ATOM 26 CG GLN 4 11.141 36.297 8.597 1.00 15.50 ATOM 27 CD GLN 4 11.864 34.948 8.629 1.00 15.50 ATOM 28 OE1 GLN 4 13.067 34.870 8.846 1.00 15.50 ATOM 29 NE2 GLN 4 11.184 33.843 8.406 1.00 15.50 ATOM 30 N GLY 5 11.052 38.021 4.528 1.00 15.10 ATOM 31 CA GLY 5 10.998 38.375 3.099 1.00 15.10 ATOM 32 C GLY 5 9.739 37.894 2.341 1.00 15.10 ATOM 33 O GLY 5 9.308 36.756 2.549 1.00 15.10 ATOM 34 N PRO 6 9.160 38.757 1.471 1.00 14.10 ATOM 35 CA PRO 6 7.904 38.634 0.717 1.00 14.10 ATOM 36 C PRO 6 6.859 37.556 1.077 1.00 14.10 ATOM 37 O PRO 6 6.295 36.921 0.186 1.00 14.10 ATOM 38 CB PRO 6 8.340 38.671 -0.746 1.00 14.70 ATOM 39 CG PRO 6 9.440 39.740 -0.707 1.00 14.70 ATOM 40 CD PRO 6 9.938 39.762 0.746 1.00 14.70 ATOM 41 N TRP 7 6.548 37.414 2.371 1.00 12.40 ATOM 42 CA TRP 7 5.458 36.642 3.005 1.00 12.40 ATOM 43 C TRP 7 5.360 35.125 2.730 1.00 12.40 ATOM 44 O TRP 7 5.231 34.357 3.681 1.00 12.40 ATOM 45 CB TRP 7 4.123 37.360 2.750 1.00 11.80 ATOM 46 CG TRP 7 4.094 38.790 3.208 1.00 11.80 ATOM 47 CD1 TRP 7 4.412 39.861 2.445 1.00 11.80 ATOM 48 CD2 TRP 7 3.776 39.326 4.532 1.00 11.80 ATOM 49 NE1 TRP 7 4.330 41.014 3.201 1.00 11.80 ATOM 50 CE2 TRP 7 3.948 40.744 4.494 1.00 11.80 ATOM 51 CE3 TRP 7 3.322 38.771 5.750 1.00 11.80 ATOM 52 CZ2 TRP 7 3.715 41.562 5.606 1.00 11.80 ATOM 53 CZ3 TRP 7 3.076 39.589 6.873 1.00 11.80 ATOM 54 CH2 TRP 7 3.276 40.979 6.806 1.00 11.80 ATOM 55 N VAL 8 5.392 34.660 1.475 1.00 12.60 ATOM 56 CA VAL 8 5.084 33.254 1.108 1.00 12.60 ATOM 57 C VAL 8 6.147 32.259 1.605 1.00 12.60 ATOM 58 O VAL 8 5.840 31.096 1.867 1.00 12.60 ATOM 59 CB VAL 8 4.868 33.080 -0.413 1.00 12.50 ATOM 60 CG1 VAL 8 4.050 31.818 -0.719 1.00 12.50 ATOM 61 CG2 VAL 8 4.142 34.273 -1.039 1.00 12.50 ATOM 62 N GLY 9 7.391 32.724 1.749 1.00 14.60 ATOM 63 CA GLY 9 8.512 31.979 2.327 1.00 14.60 ATOM 64 C GLY 9 8.881 32.492 3.719 1.00 14.60 ATOM 65 O GLY 9 9.785 33.320 3.850 1.00 14.60 ATOM 66 N SER 10 8.202 32.001 4.762 1.00 15.70 ATOM 67 CA SER 10 8.549 32.294 6.161 1.00 15.70 ATOM 68 C SER 10 8.129 31.186 7.130 1.00 15.70 ATOM 69 O SER 10 6.959 30.806 7.218 1.00 15.70 ATOM 70 CB SER 10 7.944 33.625 6.609 1.00 15.80 ATOM 71 OG SER 10 8.259 33.851 7.979 1.00 15.80 ATOM 72 N SER 11 9.090 30.737 7.937 1.00 17.20 ATOM 73 CA SER 11 8.885 29.837 9.078 1.00 17.20 ATOM 74 C SER 11 8.003 30.449 10.178 1.00 17.20 ATOM 75 O SER 11 7.309 29.710 10.873 1.00 17.20 ATOM 76 CB SER 11 10.255 29.449 9.649 1.00 17.90 ATOM 77 OG SER 11 11.032 30.609 9.929 1.00 17.90 ATOM 78 N TYR 12 7.944 31.781 10.308 1.00 16.00 ATOM 79 CA TYR 12 7.026 32.443 11.246 1.00 16.00 ATOM 80 C TYR 12 5.568 32.413 10.765 1.00 16.00 ATOM 81 O TYR 12 4.669 32.222 11.581 1.00 16.00 ATOM 82 CB TYR 12 7.506 33.869 11.550 1.00 16.40 ATOM 83 CG TYR 12 8.704 33.886 12.481 1.00 16.40 ATOM 84 CD1 TYR 12 10.011 33.998 11.970 1.00 16.40 ATOM 85 CD2 TYR 12 8.503 33.728 13.867 1.00 16.40 ATOM 86 CE1 TYR 12 11.118 33.958 12.842 1.00 16.40 ATOM 87 CE2 TYR 12 9.604 33.687 14.742 1.00 16.40 ATOM 88 CZ TYR 12 10.917 33.803 14.232 1.00 16.40 ATOM 89 OH TYR 12 11.977 33.748 15.087 1.00 16.40 ATOM 90 N VAL 13 5.314 32.488 9.452 1.00 13.50 ATOM 91 CA VAL 13 3.957 32.268 8.902 1.00 13.50 ATOM 92 C VAL 13 3.510 30.816 9.124 1.00 13.50 ATOM 93 O VAL 13 2.342 30.561 9.406 1.00 13.50 ATOM 94 CB VAL 13 3.868 32.635 7.407 1.00 12.80 ATOM 95 CG1 VAL 13 2.440 32.445 6.875 1.00 12.80 ATOM 96 CG2 VAL 13 4.257 34.093 7.137 1.00 12.80 ATOM 97 N ALA 14 4.442 29.856 9.076 1.00 15.20 ATOM 98 CA ALA 14 4.165 28.467 9.447 1.00 15.20 ATOM 99 C ALA 14 3.848 28.285 10.953 1.00 15.20 ATOM 100 O ALA 14 3.151 27.334 11.308 1.00 15.20 ATOM 101 CB ALA 14 5.333 27.588 8.984 1.00 15.60 ATOM 102 N GLU 15 4.281 29.192 11.841 1.00 16.30 ATOM 103 CA GLU 15 3.868 29.206 13.257 1.00 16.30 ATOM 104 C GLU 15 2.487 29.846 13.461 1.00 16.30 ATOM 105 O GLU 15 1.637 29.247 14.126 1.00 16.30 ATOM 106 CB GLU 15 4.910 29.901 14.154 1.00 17.60 ATOM 107 CG GLU 15 6.208 29.089 14.280 1.00 17.60 ATOM 108 CD GLU 15 7.140 29.577 15.411 1.00 17.60 ATOM 109 OE1 GLU 15 6.945 30.685 15.973 1.00 17.60 ATOM 110 OE2 GLU 15 8.094 28.836 15.758 1.00 17.60 ATOM 111 N THR 16 2.212 31.016 12.862 1.00 13.80 ATOM 112 CA THR 16 0.877 31.648 12.947 1.00 13.80 ATOM 113 C THR 16 -0.188 30.751 12.310 1.00 13.80 ATOM 114 O THR 16 -1.227 30.505 12.919 1.00 13.80 ATOM 115 CB THR 16 0.838 33.068 12.344 1.00 13.40 ATOM 116 OG1 THR 16 1.090 33.075 10.957 1.00 13.40 ATOM 117 CG2 THR 16 1.869 33.997 12.982 1.00 13.40 ATOM 118 N GLY 17 0.112 30.152 11.153 1.00 13.10 ATOM 119 CA GLY 17 -0.743 29.180 10.469 1.00 13.10 ATOM 120 C GLY 17 -1.029 27.914 11.286 1.00 13.10 ATOM 121 O GLY 17 -2.152 27.418 11.255 1.00 13.10 ATOM 122 N GLN 18 -0.072 27.417 12.077 1.00 15.40 ATOM 123 CA GLN 18 -0.296 26.255 12.953 1.00 15.40 ATOM 124 C GLN 18 -1.154 26.605 14.185 1.00 15.40 ATOM 125 O GLN 18 -2.032 25.829 14.563 1.00 15.40 ATOM 126 CB GLN 18 1.055 25.622 13.329 1.00 16.50 ATOM 127 CG GLN 18 0.917 24.273 14.058 1.00 16.50 ATOM 128 CD GLN 18 0.221 23.186 13.227 1.00 16.50 ATOM 129 OE1 GLN 18 0.295 23.135 12.005 1.00 16.50 ATOM 130 NE2 GLN 18 -0.479 22.263 13.855 1.00 16.50 ATOM 131 N ASN 19 -0.974 27.799 14.766 1.00 15.10 ATOM 132 CA ASN 19 -1.871 28.355 15.794 1.00 15.10 ATOM 133 C ASN 19 -3.304 28.545 15.245 1.00 15.10 ATOM 134 O ASN 19 -4.295 28.341 15.945 1.00 15.10 ATOM 135 CB ASN 19 -1.245 29.675 16.288 1.00 15.40 ATOM 136 CG ASN 19 -2.188 30.521 17.129 1.00 15.40 ATOM 137 OD1 ASN 19 -2.355 30.316 18.322 1.00 15.40 ATOM 138 ND2 ASN 19 -2.816 31.514 16.535 1.00 15.40 ATOM 139 N TRP 20 -3.427 28.896 13.965 1.00 12.90 ATOM 140 CA TRP 20 -4.705 29.012 13.258 1.00 12.90 ATOM 141 C TRP 20 -5.332 27.673 12.866 1.00 12.90 ATOM 142 O TRP 20 -6.556 27.576 12.859 1.00 12.90 ATOM 143 CB TRP 20 -4.480 29.943 12.069 1.00 11.40 ATOM 144 CG TRP 20 -4.153 31.356 12.456 1.00 11.40 ATOM 145 CD1 TRP 20 -4.465 31.968 13.625 1.00 11.40 ATOM 146 CD2 TRP 20 -3.475 32.368 11.657 1.00 11.40 ATOM 147 NE1 TRP 20 -4.013 33.270 13.612 1.00 11.40 ATOM 148 CE2 TRP 20 -3.385 33.567 12.425 1.00 11.40 ATOM 149 CE3 TRP 20 -2.940 32.391 10.353 1.00 11.40 ATOM 150 CZ2 TRP 20 -2.801 34.733 11.926 1.00 11.40 ATOM 151 CZ3 TRP 20 -2.337 33.553 9.842 1.00 11.40 ATOM 152 CH2 TRP 20 -2.271 34.716 10.627 1.00 11.40 ATOM 153 N ALA 21 -4.542 26.625 12.631 1.00 14.10 ATOM 154 CA ALA 21 -5.042 25.269 12.388 1.00 14.10 ATOM 155 C ALA 21 -5.747 24.647 13.617 1.00 14.10 ATOM 156 O ALA 21 -6.604 23.777 13.448 1.00 14.10 ATOM 157 CB ALA 21 -3.874 24.400 11.902 1.00 14.40 ATOM 158 N SER 22 -5.448 25.103 14.844 1.00 15.40 ATOM 159 CA SER 22 -6.212 24.742 16.054 1.00 15.40 ATOM 160 C SER 22 -7.394 25.691 16.313 1.00 15.40 ATOM 161 O SER 22 -8.467 25.232 16.714 1.00 15.40 ATOM 162 CB SER 22 -5.288 24.630 17.273 1.00 15.90 ATOM 163 OG SER 22 -4.752 25.886 17.646 1.00 15.90 ATOM 164 N LEU 23 -7.284 26.991 15.995 1.00 13.80 ATOM 165 CA LEU 23 -8.446 27.900 16.006 1.00 13.80 ATOM 166 C LEU 23 -9.491 27.539 14.929 1.00 13.80 ATOM 167 O LEU 23 -10.674 27.798 15.133 1.00 13.80 ATOM 168 CB LEU 23 -8.014 29.379 15.928 1.00 13.20 ATOM 169 CG LEU 23 -7.503 29.964 17.263 1.00 13.20 ATOM 170 CD1 LEU 23 -6.961 31.375 17.035 1.00 13.20 ATOM 171 CD2 LEU 23 -8.613 30.082 18.315 1.00 13.20 ATOM 172 N ALA 24 -9.100 26.851 13.852 1.00 13.50 ATOM 173 CA ALA 24 -10.021 26.251 12.881 1.00 13.50 ATOM 174 C ALA 24 -10.961 25.224 13.552 1.00 13.50 ATOM 175 O ALA 24 -12.182 25.292 13.413 1.00 13.50 ATOM 176 CB ALA 24 -9.190 25.595 11.774 1.00 13.30 ATOM 177 N ALA 25 -10.417 24.322 14.380 1.00 15.30 ATOM 178 CA ALA 25 -11.217 23.376 15.169 1.00 15.30 ATOM 179 C ALA 25 -12.102 24.065 16.237 1.00 15.30 ATOM 180 O ALA 25 -13.080 23.477 16.704 1.00 15.30 ATOM 181 CB ALA 25 -10.267 22.347 15.793 1.00 15.50 ATOM 182 N ASN 26 -11.788 25.316 16.604 1.00 15.30 ATOM 183 CA ASN 26 -12.602 26.162 17.483 1.00 15.30 ATOM 184 C ASN 26 -13.700 26.960 16.750 1.00 15.30 ATOM 185 O ASN 26 -14.480 27.621 17.430 1.00 15.30 ATOM 186 CB ASN 26 -11.692 27.110 18.296 1.00 15.40 ATOM 187 CG ASN 26 -10.957 26.445 19.446 1.00 15.40 ATOM 188 OD1 ASN 26 -11.296 26.653 20.602 1.00 15.40 ATOM 189 ND2 ASN 26 -9.934 25.661 19.197 1.00 15.40 ATOM 190 N GLU 27 -13.817 26.926 15.416 1.00 14.20 ATOM 191 CA GLU 27 -14.775 27.773 14.672 1.00 14.20 ATOM 192 C GLU 27 -16.234 27.619 15.145 1.00 14.20 ATOM 193 O GLU 27 -16.966 28.608 15.181 1.00 14.20 ATOM 194 CB GLU 27 -14.660 27.531 13.153 1.00 13.60 ATOM 195 CG GLU 27 -13.442 28.271 12.585 1.00 13.60 ATOM 196 CD GLU 27 -13.156 27.942 11.106 1.00 13.60 ATOM 197 OE1 GLU 27 -12.897 26.759 10.777 1.00 13.60 ATOM 198 OE2 GLU 27 -13.153 28.876 10.270 1.00 13.60 ATOM 199 N LEU 28 -16.636 26.422 15.597 1.00 15.10 ATOM 200 CA LEU 28 -17.957 26.165 16.187 1.00 15.10 ATOM 201 C LEU 28 -18.153 26.830 17.570 1.00 15.10 ATOM 202 O LEU 28 -19.224 27.376 17.839 1.00 15.10 ATOM 203 CB LEU 28 -18.168 24.639 16.235 1.00 15.20 ATOM 204 CG LEU 28 -19.548 24.189 16.754 1.00 15.20 ATOM 205 CD1 LEU 28 -20.687 24.621 15.827 1.00 15.20 ATOM 206 CD2 LEU 28 -19.579 22.664 16.866 1.00 15.20 ATOM 207 N ARG 29 -17.124 26.836 18.437 1.00 16.50 ATOM 208 CA ARG 29 -17.125 27.580 19.721 1.00 16.50 ATOM 209 C ARG 29 -17.125 29.093 19.477 1.00 16.50 ATOM 210 O ARG 29 -17.849 29.843 20.128 1.00 16.50 ATOM 211 CB ARG 29 -15.908 27.154 20.576 1.00 17.60 ATOM 212 CG ARG 29 -15.896 27.823 21.966 1.00 17.60 ATOM 213 CD ARG 29 -14.758 27.330 22.876 1.00 17.60 ATOM 214 NE ARG 29 -13.421 27.753 22.403 1.00 17.60 ATOM 215 CZ ARG 29 -12.713 28.803 22.784 1.00 17.60 ATOM 216 NH1 ARG 29 -11.528 28.995 22.292 1.00 17.60 ATOM 217 NH2 ARG 29 -13.136 29.684 23.647 1.00 17.60 ATOM 218 N VAL 30 -16.316 29.521 18.509 1.00 15.80 ATOM 219 CA VAL 30 -16.065 30.919 18.125 1.00 15.80 ATOM 220 C VAL 30 -17.263 31.583 17.418 1.00 15.80 ATOM 221 O VAL 30 -17.301 32.811 17.338 1.00 15.80 ATOM 222 CB VAL 30 -14.749 30.967 17.320 1.00 15.50 ATOM 223 CG1 VAL 30 -14.474 32.287 16.606 1.00 15.50 ATOM 224 CG2 VAL 30 -13.553 30.716 18.252 1.00 15.50 ATOM 225 N THR 31 -18.281 30.822 16.988 1.00 16.20 ATOM 226 CA THR 31 -19.565 31.363 16.493 1.00 16.20 ATOM 227 C THR 31 -20.162 32.388 17.461 1.00 16.20 ATOM 228 O THR 31 -20.496 33.504 17.063 1.00 16.20 ATOM 229 CB THR 31 -20.600 30.248 16.243 1.00 16.40 ATOM 230 OG1 THR 31 -20.175 29.442 15.167 1.00 16.40 ATOM 231 CG2 THR 31 -21.990 30.781 15.872 1.00 16.40 ATOM 232 N GLU 32 -20.285 32.013 18.736 1.00 16.80 ATOM 233 CA GLU 32 -20.816 32.878 19.790 1.00 16.80 ATOM 234 C GLU 32 -19.766 33.907 20.254 1.00 16.80 ATOM 235 O GLU 32 -18.609 33.569 20.525 1.00 16.80 ATOM 236 CB GLU 32 -21.366 31.999 20.925 1.00 17.60 ATOM 237 CG GLU 32 -22.045 32.810 22.039 1.00 17.60 ATOM 238 CD GLU 32 -22.996 31.959 22.910 1.00 17.60 ATOM 239 OE1 GLU 32 -22.789 30.730 23.063 1.00 17.60 ATOM 240 OE2 GLU 32 -23.968 32.526 23.468 1.00 17.60 ATOM 241 N ARG 33 -20.175 35.178 20.327 1.00 15.40 ATOM 242 CA ARG 33 -19.348 36.360 20.638 1.00 15.40 ATOM 243 C ARG 33 -20.175 37.427 21.380 1.00 15.40 ATOM 244 O ARG 33 -21.404 37.416 21.266 1.00 15.40 ATOM 245 CB ARG 33 -18.886 37.035 19.327 1.00 15.50 ATOM 246 CG ARG 33 -17.935 36.281 18.394 1.00 15.50 ATOM 247 CD ARG 33 -16.487 36.160 18.885 1.00 15.50 ATOM 248 NE ARG 33 -16.267 34.958 19.706 1.00 15.50 ATOM 249 CZ ARG 33 -15.105 34.532 20.157 1.00 15.50 ATOM 250 NH1 ARG 33 -15.033 33.493 20.934 1.00 15.50 ATOM 251 NH2 ARG 33 -13.985 35.124 19.854 1.00 15.50 ATOM 252 N PRO 34 -19.527 38.394 22.059 1.00 14.00 ATOM 253 CA PRO 34 -20.201 39.602 22.536 1.00 14.00 ATOM 254 C PRO 34 -20.790 40.375 21.342 1.00 14.00 ATOM 255 O PRO 34 -20.119 40.563 20.324 1.00 14.00 ATOM 256 CB PRO 34 -19.130 40.401 23.291 1.00 14.20 ATOM 257 CG PRO 34 -18.130 39.326 23.719 1.00 14.20 ATOM 258 CD PRO 34 -18.151 38.365 22.533 1.00 14.20 ATOM 259 N PHE 35 -22.040 40.834 21.449 1.00 13.10 ATOM 260 CA PHE 35 -22.814 41.377 20.316 1.00 13.10 ATOM 261 C PHE 35 -22.245 42.655 19.678 1.00 13.10 ATOM 262 O PHE 35 -22.592 42.976 18.541 1.00 13.10 ATOM 263 CB PHE 35 -24.272 41.578 20.752 1.00 14.20 ATOM 264 CG PHE 35 -24.978 40.278 21.090 1.00 14.20 ATOM 265 CD1 PHE 35 -25.129 39.869 22.431 1.00 14.20 ATOM 266 CD2 PHE 35 -25.456 39.455 20.052 1.00 14.20 ATOM 267 CE1 PHE 35 -25.749 38.640 22.727 1.00 14.20 ATOM 268 CE2 PHE 35 -26.078 38.229 20.349 1.00 14.20 ATOM 269 CZ PHE 35 -26.222 37.821 21.686 1.00 14.20 ATOM 270 N TRP 36 -21.316 43.351 20.340 1.00 11.30 ATOM 271 CA TRP 36 -20.590 44.477 19.740 1.00 11.30 ATOM 272 C TRP 36 -19.732 44.075 18.532 1.00 11.30 ATOM 273 O TRP 36 -19.532 44.895 17.637 1.00 11.30 ATOM 274 CB TRP 36 -19.745 45.165 20.811 1.00 11.80 ATOM 275 CG TRP 36 -20.504 45.607 22.026 1.00 11.80 ATOM 276 CD1 TRP 36 -20.225 45.243 23.298 1.00 11.80 ATOM 277 CD2 TRP 36 -21.633 46.534 22.112 1.00 11.80 ATOM 278 NE1 TRP 36 -21.090 45.886 24.163 1.00 11.80 ATOM 279 CE2 TRP 36 -21.966 46.708 23.490 1.00 11.80 ATOM 280 CE3 TRP 36 -22.397 47.267 21.174 1.00 11.80 ATOM 281 CZ2 TRP 36 -22.981 47.577 23.919 1.00 11.80 ATOM 282 CZ3 TRP 36 -23.418 48.143 21.593 1.00 11.80 ATOM 283 CH2 TRP 36 -23.709 48.303 22.961 1.00 11.80 ATOM 284 N ILE 37 -19.290 42.810 18.446 1.00 10.00 ATOM 285 CA ILE 37 -18.661 42.260 17.232 1.00 10.00 ATOM 286 C ILE 37 -19.664 42.313 16.070 1.00 10.00 ATOM 287 O ILE 37 -19.358 42.870 15.019 1.00 10.00 ATOM 288 CB ILE 37 -18.141 40.821 17.478 1.00 9.90 ATOM 289 CG1 ILE 37 -17.060 40.741 18.582 1.00 9.90 ATOM 290 CG2 ILE 37 -17.608 40.192 16.178 1.00 9.90 ATOM 291 CD1 ILE 37 -15.727 41.434 18.262 1.00 9.90 ATOM 292 N SER 38 -20.889 41.825 16.285 1.00 11.80 ATOM 293 CA SER 38 -21.978 41.830 15.296 1.00 11.80 ATOM 294 C SER 38 -22.363 43.243 14.833 1.00 11.80 ATOM 295 O SER 38 -22.720 43.432 13.669 1.00 11.80 ATOM 296 CB SER 38 -23.211 41.107 15.855 1.00 12.50 ATOM 297 OG SER 38 -22.843 39.843 16.391 1.00 12.50 ATOM 298 N SER 39 -22.237 44.253 15.704 1.00 11.90 ATOM 299 CA SER 39 -22.359 45.668 15.325 1.00 11.90 ATOM 300 C SER 39 -21.182 46.129 14.451 1.00 11.90 ATOM 301 O SER 39 -21.400 46.637 13.355 1.00 11.90 ATOM 302 CB SER 39 -22.467 46.571 16.563 1.00 12.10 ATOM 303 OG SER 39 -23.537 46.168 17.404 1.00 12.10 ATOM 304 N PHE 40 -19.941 45.915 14.902 1.00 10.10 ATOM 305 CA PHE 40 -18.701 46.362 14.247 1.00 10.10 ATOM 306 C PHE 40 -18.501 45.808 12.818 1.00 10.10 ATOM 307 O PHE 40 -18.054 46.529 11.926 1.00 10.10 ATOM 308 CB PHE 40 -17.537 45.976 15.178 1.00 9.10 ATOM 309 CG PHE 40 -16.156 46.044 14.562 1.00 9.10 ATOM 310 CD1 PHE 40 -15.427 47.247 14.569 1.00 9.10 ATOM 311 CD2 PHE 40 -15.592 44.889 13.987 1.00 9.10 ATOM 312 CE1 PHE 40 -14.152 47.299 13.976 1.00 9.10 ATOM 313 CE2 PHE 40 -14.321 44.943 13.394 1.00 9.10 ATOM 314 CZ PHE 40 -13.607 46.150 13.377 1.00 9.10 ATOM 315 N ILE 41 -18.841 44.536 12.584 1.00 11.10 ATOM 316 CA ILE 41 -18.721 43.879 11.265 1.00 11.10 ATOM 317 C ILE 41 -19.824 44.294 10.268 1.00 11.10 ATOM 318 O ILE 41 -19.635 44.195 9.054 1.00 11.10 ATOM 319 CB ILE 41 -18.715 42.346 11.442 1.00 11.50 ATOM 320 CG1 ILE 41 -20.099 41.847 11.919 1.00 11.50 ATOM 321 CG2 ILE 41 -17.539 41.923 12.347 1.00 11.50 ATOM 322 CD1 ILE 41 -20.142 40.373 12.297 1.00 11.50 ATOM 323 N GLY 42 -20.984 44.712 10.784 1.00 13.10 ATOM 324 CA GLY 42 -22.148 45.171 10.024 1.00 13.10 ATOM 325 C GLY 42 -22.288 46.693 10.097 1.00 13.10 ATOM 326 O GLY 42 -21.288 47.407 10.043 1.00 13.10 ATOM 327 N ARG 43 -23.538 47.178 10.205 1.00 13.80 ATOM 328 CA ARG 43 -23.921 48.579 10.522 1.00 13.80 ATOM 329 C ARG 43 -23.129 49.658 9.754 1.00 13.80 ATOM 330 O ARG 43 -22.836 50.729 10.285 1.00 13.80 ATOM 331 CB ARG 43 -23.902 48.807 12.054 1.00 13.90 ATOM 332 CG ARG 43 -24.639 47.761 12.908 1.00 13.90 ATOM 333 CD ARG 43 -26.143 47.678 12.626 1.00 13.90 ATOM 334 NE ARG 43 -26.804 46.762 13.582 1.00 13.90 ATOM 335 CZ ARG 43 -27.872 46.999 14.329 1.00 13.90 ATOM 336 NH1 ARG 43 -28.311 46.092 15.154 1.00 13.90 ATOM 337 NH2 ARG 43 -28.525 48.126 14.282 1.00 13.90 ATOM 338 N SER 44 -22.809 49.389 8.487 1.00 14.60 ATOM 339 CA SER 44 -22.017 50.258 7.591 1.00 14.60 ATOM 340 C SER 44 -22.620 51.665 7.436 1.00 14.60 ATOM 341 O SER 44 -21.892 52.653 7.318 1.00 14.60 ATOM 342 CB SER 44 -21.910 49.571 6.222 1.00 14.90 ATOM 343 OG SER 44 -23.203 49.259 5.719 1.00 14.90 ATOM 344 N LYS 45 -23.951 51.752 7.551 1.00 15.10 ATOM 345 CA LYS 45 -24.783 52.963 7.646 1.00 15.10 ATOM 346 C LYS 45 -24.324 53.983 8.706 1.00 15.10 ATOM 347 O LYS 45 -24.532 55.180 8.517 1.00 15.10 ATOM 348 CB LYS 45 -26.213 52.453 7.913 1.00 15.90 ATOM 349 CG LYS 45 -27.274 53.534 8.161 1.00 15.90 ATOM 350 CD LYS 45 -28.663 52.885 8.290 1.00 15.90 ATOM 351 CE LYS 45 -29.737 53.866 8.786 1.00 15.90 ATOM 352 NZ LYS 45 -29.622 54.142 10.246 1.00 15.90 TER END