####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS402_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS402_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 11 - 33 4.93 15.64 LCS_AVERAGE: 43.96 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 22 - 29 0.48 17.00 LCS_AVERAGE: 14.51 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 22 - 29 0.48 17.00 LCS_AVERAGE: 10.43 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 12 3 3 4 4 4 6 8 9 9 9 10 14 17 20 24 26 27 29 30 32 LCS_GDT V 3 V 3 3 5 12 3 3 4 5 5 6 8 9 9 9 10 14 17 20 21 26 27 29 30 32 LCS_GDT Q 4 Q 4 4 6 13 3 3 4 5 6 6 8 9 9 9 10 14 17 20 24 26 28 29 31 32 LCS_GDT G 5 G 5 4 6 13 3 3 4 5 6 6 8 9 10 13 15 18 21 22 25 26 28 29 31 32 LCS_GDT P 6 P 6 4 6 13 3 3 4 6 7 8 9 11 13 14 16 19 21 22 25 26 28 29 30 32 LCS_GDT W 7 W 7 4 6 13 3 3 5 6 7 8 9 11 13 14 16 19 21 22 25 26 28 29 31 32 LCS_GDT V 8 V 8 3 6 14 3 3 4 6 6 8 9 11 13 14 16 19 21 22 25 26 28 29 31 32 LCS_GDT G 9 G 9 3 6 14 3 3 5 6 7 8 9 11 13 14 16 19 21 22 25 26 28 29 31 32 LCS_GDT S 10 S 10 3 5 14 3 3 3 5 5 6 6 10 13 14 16 19 21 22 25 26 28 29 31 32 LCS_GDT S 11 S 11 3 4 23 3 3 3 4 4 7 9 11 13 14 17 19 21 22 25 26 28 29 31 32 LCS_GDT Y 12 Y 12 3 4 23 3 3 3 5 7 9 9 12 13 14 17 19 21 22 25 26 28 29 31 32 LCS_GDT V 13 V 13 3 4 23 3 3 3 5 6 8 9 12 13 14 17 19 21 22 25 26 28 29 31 32 LCS_GDT A 14 A 14 3 6 23 3 5 5 5 7 9 9 12 13 14 17 19 21 22 25 26 28 29 31 32 LCS_GDT E 15 E 15 3 7 23 3 5 5 5 7 7 8 12 13 14 17 19 21 22 25 26 28 29 31 32 LCS_GDT T 16 T 16 3 7 23 3 5 5 5 7 8 8 10 11 14 16 19 20 22 25 26 28 29 31 32 LCS_GDT G 17 G 17 3 7 23 3 3 3 4 7 8 8 12 13 14 17 19 20 22 25 26 28 29 31 32 LCS_GDT Q 18 Q 18 4 7 23 3 5 5 5 7 8 8 12 13 14 17 19 20 22 24 26 28 29 31 32 LCS_GDT N 19 N 19 4 7 23 3 5 5 5 7 9 9 12 13 14 17 19 20 22 23 23 26 29 31 32 LCS_GDT W 20 W 20 4 7 23 3 4 4 5 7 9 9 12 13 14 17 19 20 22 23 26 27 29 31 32 LCS_GDT A 21 A 21 4 7 23 3 4 4 5 7 9 9 12 13 14 17 19 20 22 24 26 28 29 31 32 LCS_GDT S 22 S 22 8 8 23 7 8 8 8 8 8 8 12 13 14 17 19 20 22 25 26 28 29 31 32 LCS_GDT L 23 L 23 8 8 23 4 8 8 8 8 8 8 12 13 14 16 18 20 22 25 26 28 29 31 32 LCS_GDT A 24 A 24 8 8 23 7 8 8 8 8 8 9 12 13 14 17 19 21 22 25 26 28 29 31 32 LCS_GDT A 25 A 25 8 8 23 7 8 8 8 8 9 9 12 13 14 17 19 21 22 25 26 28 29 31 32 LCS_GDT N 26 N 26 8 8 23 7 8 8 8 8 9 9 12 13 14 17 19 21 22 25 26 28 29 31 32 LCS_GDT E 27 E 27 8 8 23 7 8 8 8 8 8 9 12 13 14 17 19 21 22 25 26 28 29 31 32 LCS_GDT L 28 L 28 8 8 23 7 8 8 8 8 8 9 12 13 14 17 19 21 22 23 26 27 29 31 32 LCS_GDT R 29 R 29 8 8 23 7 8 8 8 8 8 9 12 13 14 17 19 21 22 25 26 28 29 31 32 LCS_GDT V 30 V 30 3 4 23 3 3 5 6 7 8 9 11 13 14 17 19 21 22 25 26 28 29 31 32 LCS_GDT T 31 T 31 3 5 23 3 3 3 4 6 9 9 12 13 14 17 19 21 22 25 26 28 29 31 32 LCS_GDT E 32 E 32 4 6 23 3 4 5 6 7 9 9 12 13 14 17 19 21 22 25 26 28 29 31 32 LCS_GDT R 33 R 33 4 6 23 3 4 5 6 7 8 9 11 13 14 17 19 21 22 25 26 28 29 31 32 LCS_GDT P 34 P 34 4 6 17 3 4 5 5 6 8 9 11 12 14 15 19 20 22 25 26 28 29 31 32 LCS_GDT F 35 F 35 4 6 17 3 4 5 6 7 8 9 11 12 14 14 14 16 19 22 26 28 29 31 32 LCS_GDT W 36 W 36 5 6 17 3 5 5 6 6 8 9 10 11 14 14 14 15 16 17 19 21 23 25 26 LCS_GDT I 37 I 37 5 6 17 4 5 5 6 7 8 9 11 12 14 14 14 15 16 17 17 18 19 20 23 LCS_GDT S 38 S 38 5 6 17 4 5 5 6 7 8 9 11 12 14 14 14 15 16 17 17 18 19 20 23 LCS_GDT S 39 S 39 5 7 17 4 5 5 6 7 8 9 11 12 14 14 14 15 16 17 18 18 19 21 23 LCS_GDT F 40 F 40 5 7 17 4 5 5 6 7 8 9 10 11 14 14 14 15 16 17 17 17 18 20 21 LCS_GDT I 41 I 41 5 7 17 4 4 5 5 6 7 8 11 12 14 14 14 15 16 17 18 18 19 20 23 LCS_GDT G 42 G 42 5 7 17 4 4 5 5 6 7 7 11 12 14 14 14 15 16 17 18 18 19 20 23 LCS_GDT R 43 R 43 5 7 17 4 4 4 5 6 7 9 11 12 14 14 14 15 16 17 17 17 18 20 23 LCS_GDT S 44 S 44 4 7 17 4 4 5 5 6 7 9 11 12 14 14 14 15 16 17 17 17 18 19 21 LCS_GDT K 45 K 45 4 7 17 4 4 5 5 6 7 9 11 12 14 14 14 15 15 15 17 17 17 17 18 LCS_AVERAGE LCS_A: 22.97 ( 10.43 14.51 43.96 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 8 8 8 8 9 9 12 13 14 17 19 21 22 25 26 28 29 31 32 GDT PERCENT_AT 15.91 18.18 18.18 18.18 18.18 20.45 20.45 27.27 29.55 31.82 38.64 43.18 47.73 50.00 56.82 59.09 63.64 65.91 70.45 72.73 GDT RMS_LOCAL 0.30 0.48 0.48 0.48 0.48 2.48 2.16 2.85 3.00 3.46 3.99 4.28 4.59 4.72 5.46 5.73 6.03 6.20 6.68 6.69 GDT RMS_ALL_AT 16.87 17.00 17.00 17.00 17.00 16.52 13.76 16.82 16.42 28.16 15.54 14.22 14.12 14.18 14.04 14.03 14.05 14.20 13.79 13.92 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 23.814 0 0.028 0.046 26.352 0.000 0.000 - LGA V 3 V 3 21.479 0 0.117 1.071 24.871 0.000 0.000 20.892 LGA Q 4 Q 4 24.973 0 0.024 0.153 25.580 0.000 0.000 22.396 LGA G 5 G 5 28.047 0 0.042 0.042 28.545 0.000 0.000 - LGA P 6 P 6 30.169 0 0.093 0.458 32.923 0.000 0.000 32.923 LGA W 7 W 7 23.694 0 0.508 1.125 31.636 0.000 0.000 31.636 LGA V 8 V 8 18.957 0 0.646 1.476 20.702 0.000 0.000 20.307 LGA G 9 G 9 15.257 0 0.523 0.523 16.675 0.000 0.000 - LGA S 10 S 10 10.457 0 0.666 0.704 14.168 0.000 0.000 14.168 LGA S 11 S 11 5.424 0 0.604 0.985 7.436 1.818 1.212 6.092 LGA Y 12 Y 12 2.129 0 0.603 1.326 3.934 28.636 57.273 0.762 LGA V 13 V 13 2.813 0 0.606 1.460 5.522 19.545 26.234 2.703 LGA A 14 A 14 9.316 0 0.624 0.600 11.033 0.000 0.000 - LGA E 15 E 15 12.471 0 0.625 1.250 14.815 0.000 0.000 14.019 LGA T 16 T 16 13.352 0 0.712 0.612 15.461 0.000 0.000 11.663 LGA G 17 G 17 12.222 0 0.252 0.252 12.771 0.000 0.000 - LGA Q 18 Q 18 9.991 0 0.133 1.388 13.942 0.000 0.000 12.350 LGA N 19 N 19 8.905 0 0.311 0.771 13.685 0.000 0.000 13.685 LGA W 20 W 20 3.540 0 0.159 0.865 6.654 12.273 14.156 6.422 LGA A 21 A 21 2.286 0 0.634 0.606 4.170 43.636 36.000 - LGA S 22 S 22 4.657 0 0.624 0.722 7.989 15.909 10.606 7.989 LGA L 23 L 23 4.066 0 0.103 1.004 7.341 16.818 8.409 7.341 LGA A 24 A 24 3.158 0 0.025 0.034 4.270 28.182 23.636 - LGA A 25 A 25 1.487 0 0.024 0.039 2.207 71.364 64.727 - LGA N 26 N 26 0.877 0 0.040 1.192 4.889 70.000 49.091 4.889 LGA E 27 E 27 2.085 0 0.082 0.837 3.634 35.455 33.333 2.946 LGA L 28 L 28 2.349 0 0.237 0.230 3.213 36.364 32.045 2.897 LGA R 29 R 29 2.473 0 0.387 0.927 13.034 30.455 11.240 13.034 LGA V 30 V 30 6.820 0 0.623 1.052 9.975 1.364 0.779 9.975 LGA T 31 T 31 8.692 0 0.154 0.152 11.483 0.000 0.000 8.064 LGA E 32 E 32 10.196 0 0.654 1.244 12.223 0.000 0.404 4.519 LGA R 33 R 33 13.788 0 0.634 1.758 16.168 0.000 0.000 16.103 LGA P 34 P 34 19.967 0 0.640 0.637 22.549 0.000 0.000 22.549 LGA F 35 F 35 17.964 0 0.091 1.262 19.545 0.000 0.000 18.880 LGA W 36 W 36 21.822 0 0.267 0.985 29.950 0.000 0.000 29.606 LGA I 37 I 37 26.221 0 0.119 0.519 30.226 0.000 0.000 30.226 LGA S 38 S 38 27.704 0 0.048 0.648 28.787 0.000 0.000 28.787 LGA S 39 S 39 20.714 0 0.094 0.578 23.028 0.000 0.000 17.726 LGA F 40 F 40 23.649 0 0.186 1.108 29.145 0.000 0.000 29.145 LGA I 41 I 41 21.722 0 0.072 1.054 22.183 0.000 0.000 21.134 LGA G 42 G 42 20.815 0 0.707 0.707 21.801 0.000 0.000 - LGA R 43 R 43 22.667 0 0.068 1.240 24.278 0.000 0.000 19.691 LGA S 44 S 44 25.541 0 0.087 0.647 26.564 0.000 0.000 26.564 LGA K 45 K 45 28.897 0 0.082 0.718 34.437 0.000 0.000 34.437 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 12.428 12.311 13.285 9.360 8.390 4.779 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.85 30.682 25.399 0.407 LGA_LOCAL RMSD: 2.848 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 16.822 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 12.428 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.286092 * X + 0.249874 * Y + -0.925048 * Z + -37.054390 Y_new = -0.698987 * X + 0.714761 * Y + -0.023106 * Z + 93.901009 Z_new = 0.655415 * X + 0.653207 * Y + 0.379146 * Z + 60.718735 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.182303 -0.714732 1.044885 [DEG: -67.7410 -40.9511 59.8675 ] ZXZ: -1.545824 1.181923 0.787086 [DEG: -88.5692 67.7192 45.0967 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS402_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS402_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.85 25.399 12.43 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS402_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 9 N ALA 2 3.780 13.106 16.850 1.00179.66 N ATOM 10 CA ALA 2 4.160 13.789 18.046 1.00179.66 C ATOM 11 CB ALA 2 4.453 12.839 19.222 1.00179.66 C ATOM 12 C ALA 2 5.401 14.566 17.761 1.00179.66 C ATOM 13 O ALA 2 6.199 14.207 16.899 1.00179.66 O ATOM 14 N VAL 3 5.574 15.692 18.476 1.00128.22 N ATOM 15 CA VAL 3 6.752 16.485 18.297 1.00128.22 C ATOM 16 CB VAL 3 6.486 17.936 18.028 1.00128.22 C ATOM 17 CG1 VAL 3 5.743 18.524 19.238 1.00128.22 C ATOM 18 CG2 VAL 3 7.826 18.633 17.734 1.00128.22 C ATOM 19 C VAL 3 7.499 16.413 19.580 1.00128.22 C ATOM 20 O VAL 3 6.913 16.201 20.640 1.00128.22 O ATOM 21 N GLN 4 8.831 16.563 19.510 1.00186.17 N ATOM 22 CA GLN 4 9.608 16.489 20.705 1.00186.17 C ATOM 23 CB GLN 4 11.114 16.397 20.430 1.00186.17 C ATOM 24 CG GLN 4 11.490 15.128 19.665 1.00186.17 C ATOM 25 CD GLN 4 12.989 15.161 19.419 1.00186.17 C ATOM 26 OE1 GLN 4 13.507 16.100 18.818 1.00186.17 O ATOM 27 NE2 GLN 4 13.708 14.113 19.904 1.00186.17 N ATOM 28 C GLN 4 9.335 17.736 21.479 1.00186.17 C ATOM 29 O GLN 4 9.170 18.811 20.906 1.00186.17 O ATOM 30 N GLY 5 9.255 17.606 22.817 1.00 92.82 N ATOM 31 CA GLY 5 8.970 18.739 23.646 1.00 92.82 C ATOM 32 C GLY 5 7.483 18.834 23.723 1.00 92.82 C ATOM 33 O GLY 5 6.773 18.241 22.914 1.00 92.82 O ATOM 34 N PRO 6 6.987 19.565 24.681 1.00244.07 N ATOM 35 CA PRO 6 5.563 19.697 24.779 1.00244.07 C ATOM 36 CD PRO 6 7.636 19.666 25.979 1.00244.07 C ATOM 37 CB PRO 6 5.309 20.373 26.124 1.00244.07 C ATOM 38 CG PRO 6 6.496 19.899 26.988 1.00244.07 C ATOM 39 C PRO 6 5.014 20.404 23.585 1.00244.07 C ATOM 40 O PRO 6 3.878 20.132 23.202 1.00244.07 O ATOM 41 N TRP 7 5.797 21.322 22.993 1.00256.94 N ATOM 42 CA TRP 7 5.364 22.023 21.821 1.00256.94 C ATOM 43 CB TRP 7 4.436 23.225 22.085 1.00256.94 C ATOM 44 CG TRP 7 2.984 22.882 22.330 1.00256.94 C ATOM 45 CD2 TRP 7 2.402 22.555 23.603 1.00256.94 C ATOM 46 CD1 TRP 7 1.971 22.824 21.418 1.00256.94 C ATOM 47 NE1 TRP 7 0.795 22.490 22.041 1.00256.94 N ATOM 48 CE2 TRP 7 1.043 22.318 23.384 1.00256.94 C ATOM 49 CE3 TRP 7 2.951 22.464 24.849 1.00256.94 C ATOM 50 CZ2 TRP 7 0.208 21.988 24.414 1.00256.94 C ATOM 51 CZ3 TRP 7 2.106 22.120 25.882 1.00256.94 C ATOM 52 CH2 TRP 7 0.764 21.887 25.670 1.00256.94 C ATOM 53 C TRP 7 6.572 22.539 21.115 1.00256.94 C ATOM 54 O TRP 7 7.705 22.295 21.528 1.00256.94 O ATOM 55 N VAL 8 6.342 23.255 19.998 1.00106.58 N ATOM 56 CA VAL 8 7.414 23.818 19.234 1.00106.58 C ATOM 57 CB VAL 8 7.665 23.125 17.924 1.00106.58 C ATOM 58 CG1 VAL 8 8.126 21.683 18.195 1.00106.58 C ATOM 59 CG2 VAL 8 6.390 23.224 17.076 1.00106.58 C ATOM 60 C VAL 8 7.028 25.226 18.919 1.00106.58 C ATOM 61 O VAL 8 5.945 25.686 19.280 1.00106.58 O ATOM 62 N GLY 9 7.930 25.963 18.245 1.00 12.20 N ATOM 63 CA GLY 9 7.638 27.325 17.915 1.00 12.20 C ATOM 64 C GLY 9 6.644 27.310 16.804 1.00 12.20 C ATOM 65 O GLY 9 6.389 26.274 16.191 1.00 12.20 O ATOM 66 N SER 10 6.039 28.477 16.517 1.00 80.27 N ATOM 67 CA SER 10 5.067 28.490 15.470 1.00 80.27 C ATOM 68 CB SER 10 3.666 28.909 15.936 1.00 80.27 C ATOM 69 OG SER 10 3.155 27.969 16.868 1.00 80.27 O ATOM 70 C SER 10 5.494 29.483 14.448 1.00 80.27 C ATOM 71 O SER 10 6.087 30.513 14.765 1.00 80.27 O ATOM 72 N SER 11 5.194 29.168 13.175 1.00123.30 N ATOM 73 CA SER 11 5.485 30.021 12.063 1.00123.30 C ATOM 74 CB SER 11 6.443 29.401 11.026 1.00123.30 C ATOM 75 OG SER 11 7.719 29.159 11.602 1.00123.30 O ATOM 76 C SER 11 4.176 30.193 11.377 1.00123.30 C ATOM 77 O SER 11 3.165 29.641 11.809 1.00123.30 O ATOM 78 N TYR 12 4.136 31.008 10.309 1.00223.83 N ATOM 79 CA TYR 12 2.867 31.112 9.667 1.00223.83 C ATOM 80 CB TYR 12 2.374 32.549 9.458 1.00223.83 C ATOM 81 CG TYR 12 1.055 32.402 8.784 1.00223.83 C ATOM 82 CD1 TYR 12 -0.021 31.899 9.478 1.00223.83 C ATOM 83 CD2 TYR 12 0.896 32.773 7.471 1.00223.83 C ATOM 84 CE1 TYR 12 -1.242 31.759 8.863 1.00223.83 C ATOM 85 CE2 TYR 12 -0.325 32.636 6.852 1.00223.83 C ATOM 86 CZ TYR 12 -1.395 32.126 7.548 1.00223.83 C ATOM 87 OH TYR 12 -2.647 31.985 6.916 1.00223.83 O ATOM 88 C TYR 12 2.968 30.464 8.332 1.00223.83 C ATOM 89 O TYR 12 3.545 31.014 7.396 1.00223.83 O ATOM 90 N VAL 13 2.387 29.257 8.229 1.00130.45 N ATOM 91 CA VAL 13 2.378 28.522 7.006 1.00130.45 C ATOM 92 CB VAL 13 3.258 27.307 7.015 1.00130.45 C ATOM 93 CG1 VAL 13 4.723 27.753 7.173 1.00130.45 C ATOM 94 CG2 VAL 13 2.765 26.359 8.121 1.00130.45 C ATOM 95 C VAL 13 0.979 28.038 6.850 1.00130.45 C ATOM 96 O VAL 13 0.207 28.039 7.806 1.00130.45 O ATOM 97 N ALA 14 0.605 27.617 5.629 1.00214.54 N ATOM 98 CA ALA 14 -0.745 27.184 5.448 1.00214.54 C ATOM 99 CB ALA 14 -1.062 26.711 4.020 1.00214.54 C ATOM 100 C ALA 14 -0.972 26.025 6.360 1.00214.54 C ATOM 101 O ALA 14 -0.132 25.135 6.481 1.00214.54 O ATOM 102 N GLU 15 -2.128 26.029 7.047 1.00271.20 N ATOM 103 CA GLU 15 -2.478 24.962 7.933 1.00271.20 C ATOM 104 CB GLU 15 -2.253 25.267 9.426 1.00271.20 C ATOM 105 CG GLU 15 -2.356 24.022 10.310 1.00271.20 C ATOM 106 CD GLU 15 -2.138 24.433 11.758 1.00271.20 C ATOM 107 OE1 GLU 15 -2.426 25.613 12.091 1.00271.20 O ATOM 108 OE2 GLU 15 -1.691 23.566 12.555 1.00271.20 O ATOM 109 C GLU 15 -3.943 24.764 7.748 1.00271.20 C ATOM 110 O GLU 15 -4.568 25.418 6.914 1.00271.20 O ATOM 111 N THR 16 -4.536 23.837 8.519 1.00214.01 N ATOM 112 CA THR 16 -5.944 23.622 8.388 1.00214.01 C ATOM 113 CB THR 16 -6.458 22.463 9.188 1.00214.01 C ATOM 114 OG1 THR 16 -6.174 22.659 10.566 1.00214.01 O ATOM 115 CG2 THR 16 -5.802 21.171 8.681 1.00214.01 C ATOM 116 C THR 16 -6.607 24.845 8.914 1.00214.01 C ATOM 117 O THR 16 -5.947 25.775 9.375 1.00214.01 O ATOM 118 N GLY 17 -7.950 24.887 8.846 1.00 53.25 N ATOM 119 CA GLY 17 -8.611 26.063 9.317 1.00 53.25 C ATOM 120 C GLY 17 -8.284 27.156 8.354 1.00 53.25 C ATOM 121 O GLY 17 -7.866 28.244 8.744 1.00 53.25 O ATOM 122 N GLN 18 -8.450 26.882 7.050 1.00257.97 N ATOM 123 CA GLN 18 -8.149 27.879 6.069 1.00257.97 C ATOM 124 CB GLN 18 -8.424 27.423 4.628 1.00257.97 C ATOM 125 CG GLN 18 -9.903 27.131 4.374 1.00257.97 C ATOM 126 CD GLN 18 -10.239 25.842 5.114 1.00257.97 C ATOM 127 OE1 GLN 18 -9.818 24.756 4.719 1.00257.97 O ATOM 128 NE2 GLN 18 -11.024 25.959 6.218 1.00257.97 N ATOM 129 C GLN 18 -9.033 29.046 6.346 1.00257.97 C ATOM 130 O GLN 18 -9.983 28.952 7.120 1.00257.97 O ATOM 131 N ASN 19 -8.715 30.194 5.725 1.00231.76 N ATOM 132 CA ASN 19 -9.480 31.385 5.941 1.00231.76 C ATOM 133 CB ASN 19 -10.981 31.217 5.646 1.00231.76 C ATOM 134 CG ASN 19 -11.182 30.979 4.154 1.00231.76 C ATOM 135 OD1 ASN 19 -12.315 30.906 3.679 1.00231.76 O ATOM 136 ND2 ASN 19 -10.062 30.847 3.394 1.00231.76 N ATOM 137 C ASN 19 -9.361 31.750 7.382 1.00231.76 C ATOM 138 O ASN 19 -10.263 32.371 7.942 1.00231.76 O ATOM 139 N TRP 20 -8.232 31.390 8.023 1.00243.13 N ATOM 140 CA TRP 20 -8.084 31.751 9.399 1.00243.13 C ATOM 141 CB TRP 20 -7.966 30.556 10.366 1.00243.13 C ATOM 142 CG TRP 20 -9.256 29.783 10.530 1.00243.13 C ATOM 143 CD2 TRP 20 -9.412 28.650 11.397 1.00243.13 C ATOM 144 CD1 TRP 20 -10.465 29.981 9.930 1.00243.13 C ATOM 145 NE1 TRP 20 -11.367 29.039 10.370 1.00243.13 N ATOM 146 CE2 TRP 20 -10.730 28.215 11.275 1.00243.13 C ATOM 147 CE3 TRP 20 -8.527 28.023 12.230 1.00243.13 C ATOM 148 CZ2 TRP 20 -11.188 27.145 11.988 1.00243.13 C ATOM 149 CZ3 TRP 20 -8.991 26.943 12.945 1.00243.13 C ATOM 150 CH2 TRP 20 -10.297 26.512 12.826 1.00243.13 C ATOM 151 C TRP 20 -6.862 32.602 9.516 1.00243.13 C ATOM 152 O TRP 20 -6.040 32.666 8.603 1.00243.13 O ATOM 153 N ALA 21 -6.741 33.300 10.661 1.00203.22 N ATOM 154 CA ALA 21 -5.666 34.214 10.915 1.00203.22 C ATOM 155 CB ALA 21 -5.871 35.065 12.181 1.00203.22 C ATOM 156 C ALA 21 -4.397 33.441 11.080 1.00203.22 C ATOM 157 O ALA 21 -4.416 32.220 11.234 1.00203.22 O ATOM 158 N SER 22 -3.249 34.151 11.018 1.00174.80 N ATOM 159 CA SER 22 -1.971 33.514 11.123 1.00174.80 C ATOM 160 CB SER 22 -0.772 34.480 11.010 1.00174.80 C ATOM 161 OG SER 22 -0.733 35.083 9.725 1.00174.80 O ATOM 162 C SER 22 -1.899 32.860 12.460 1.00174.80 C ATOM 163 O SER 22 -2.461 33.347 13.440 1.00174.80 O ATOM 164 N LEU 23 -1.201 31.710 12.509 1.00135.28 N ATOM 165 CA LEU 23 -1.081 30.946 13.712 1.00135.28 C ATOM 166 CB LEU 23 -0.251 29.662 13.490 1.00135.28 C ATOM 167 CG LEU 23 -0.199 28.666 14.674 1.00135.28 C ATOM 168 CD1 LEU 23 0.484 29.252 15.923 1.00135.28 C ATOM 169 CD2 LEU 23 -1.582 28.052 14.958 1.00135.28 C ATOM 170 C LEU 23 -0.365 31.788 14.713 1.00135.28 C ATOM 171 O LEU 23 -0.814 31.940 15.842 1.00135.28 O ATOM 172 N ALA 24 0.773 32.376 14.317 1.00 33.21 N ATOM 173 CA ALA 24 1.562 33.173 15.209 1.00 33.21 C ATOM 174 CB ALA 24 2.892 33.610 14.571 1.00 33.21 C ATOM 175 C ALA 24 0.810 34.412 15.594 1.00 33.21 C ATOM 176 O ALA 24 0.886 34.879 16.731 1.00 33.21 O ATOM 177 N ALA 25 0.036 34.947 14.634 1.00 44.68 N ATOM 178 CA ALA 25 -0.606 36.229 14.712 1.00 44.68 C ATOM 179 CB ALA 25 -1.462 36.520 13.469 1.00 44.68 C ATOM 180 C ALA 25 -1.518 36.344 15.890 1.00 44.68 C ATOM 181 O ALA 25 -1.518 37.377 16.559 1.00 44.68 O ATOM 182 N ASN 26 -2.317 35.306 16.199 1.00 83.23 N ATOM 183 CA ASN 26 -3.233 35.485 17.291 1.00 83.23 C ATOM 184 CB ASN 26 -4.183 34.296 17.563 1.00 83.23 C ATOM 185 CG ASN 26 -3.400 33.148 18.182 1.00 83.23 C ATOM 186 OD1 ASN 26 -2.383 32.726 17.646 1.00 83.23 O ATOM 187 ND2 ASN 26 -3.860 32.647 19.363 1.00 83.23 N ATOM 188 C ASN 26 -2.423 35.698 18.529 1.00 83.23 C ATOM 189 O ASN 26 -2.765 36.527 19.370 1.00 83.23 O ATOM 190 N GLU 27 -1.300 34.965 18.653 1.00 28.61 N ATOM 191 CA GLU 27 -0.478 35.050 19.825 1.00 28.61 C ATOM 192 CB GLU 27 0.741 34.116 19.761 1.00 28.61 C ATOM 193 CG GLU 27 0.399 32.625 19.790 1.00 28.61 C ATOM 194 CD GLU 27 1.708 31.857 19.669 1.00 28.61 C ATOM 195 OE1 GLU 27 2.765 32.440 20.031 1.00 28.61 O ATOM 196 OE2 GLU 27 1.672 30.684 19.209 1.00 28.61 O ATOM 197 C GLU 27 0.061 36.438 19.937 1.00 28.61 C ATOM 198 O GLU 27 0.149 37.005 21.025 1.00 28.61 O ATOM 199 N LEU 28 0.432 37.037 18.797 1.00 40.16 N ATOM 200 CA LEU 28 1.031 38.330 18.867 1.00 40.16 C ATOM 201 CB LEU 28 1.493 38.857 17.500 1.00 40.16 C ATOM 202 CG LEU 28 2.645 38.019 16.916 1.00 40.16 C ATOM 203 CD1 LEU 28 3.202 38.649 15.631 1.00 40.16 C ATOM 204 CD2 LEU 28 3.721 37.736 17.978 1.00 40.16 C ATOM 205 C LEU 28 0.060 39.293 19.467 1.00 40.16 C ATOM 206 O LEU 28 0.441 40.143 20.268 1.00 40.16 O ATOM 207 N ARG 29 -1.232 39.190 19.116 1.00 93.83 N ATOM 208 CA ARG 29 -2.160 40.140 19.655 1.00 93.83 C ATOM 209 CB ARG 29 -3.601 39.941 19.159 1.00 93.83 C ATOM 210 CG ARG 29 -3.791 40.146 17.657 1.00 93.83 C ATOM 211 CD ARG 29 -5.220 39.848 17.199 1.00 93.83 C ATOM 212 NE ARG 29 -5.513 38.441 17.592 1.00 93.83 N ATOM 213 CZ ARG 29 -6.571 37.776 17.043 1.00 93.83 C ATOM 214 NH1 ARG 29 -7.350 38.391 16.107 1.00 93.83 N ATOM 215 NH2 ARG 29 -6.852 36.495 17.423 1.00 93.83 N ATOM 216 C ARG 29 -2.216 40.006 21.147 1.00 93.83 C ATOM 217 O ARG 29 -2.170 41.004 21.865 1.00 93.83 O ATOM 218 N VAL 30 -2.290 38.762 21.657 1.00 94.73 N ATOM 219 CA VAL 30 -2.481 38.549 23.067 1.00 94.73 C ATOM 220 CB VAL 30 -2.693 37.110 23.445 1.00 94.73 C ATOM 221 CG1 VAL 30 -3.935 36.597 22.696 1.00 94.73 C ATOM 222 CG2 VAL 30 -1.412 36.314 23.167 1.00 94.73 C ATOM 223 C VAL 30 -1.306 39.071 23.833 1.00 94.73 C ATOM 224 O VAL 30 -1.457 39.582 24.943 1.00 94.73 O ATOM 225 N THR 31 -0.095 38.972 23.259 1.00 29.50 N ATOM 226 CA THR 31 1.067 39.411 23.975 1.00 29.50 C ATOM 227 CB THR 31 2.331 39.275 23.177 1.00 29.50 C ATOM 228 OG1 THR 31 2.295 40.137 22.051 1.00 29.50 O ATOM 229 CG2 THR 31 2.465 37.813 22.716 1.00 29.50 C ATOM 230 C THR 31 0.887 40.860 24.297 1.00 29.50 C ATOM 231 O THR 31 1.240 41.314 25.383 1.00 29.50 O ATOM 232 N GLU 32 0.320 41.616 23.342 1.00 88.01 N ATOM 233 CA GLU 32 0.090 43.024 23.466 1.00 88.01 C ATOM 234 CB GLU 32 -0.390 43.690 22.167 1.00 88.01 C ATOM 235 CG GLU 32 -0.404 45.219 22.248 1.00 88.01 C ATOM 236 CD GLU 32 -0.651 45.766 20.849 1.00 88.01 C ATOM 237 OE1 GLU 32 -1.353 45.078 20.062 1.00 88.01 O ATOM 238 OE2 GLU 32 -0.140 46.878 20.547 1.00 88.01 O ATOM 239 C GLU 32 -0.941 43.275 24.523 1.00 88.01 C ATOM 240 O GLU 32 -1.044 44.388 25.037 1.00 88.01 O ATOM 241 N ARG 33 -1.736 42.251 24.880 1.00122.69 N ATOM 242 CA ARG 33 -2.834 42.431 25.790 1.00122.69 C ATOM 243 CB ARG 33 -3.463 41.118 26.279 1.00122.69 C ATOM 244 CG ARG 33 -4.629 41.354 27.247 1.00122.69 C ATOM 245 CD ARG 33 -4.798 40.255 28.301 1.00122.69 C ATOM 246 NE ARG 33 -3.887 40.593 29.433 1.00122.69 N ATOM 247 CZ ARG 33 -4.204 40.242 30.713 1.00122.69 C ATOM 248 NH1 ARG 33 -5.348 39.544 30.976 1.00122.69 N ATOM 249 NH2 ARG 33 -3.385 40.625 31.736 1.00122.69 N ATOM 250 C ARG 33 -2.385 43.098 27.049 1.00122.69 C ATOM 251 O ARG 33 -3.111 43.954 27.553 1.00122.69 O ATOM 252 N PRO 34 -1.248 42.783 27.599 1.00154.53 N ATOM 253 CA PRO 34 -0.875 43.410 28.834 1.00154.53 C ATOM 254 CD PRO 34 -0.653 41.464 27.457 1.00154.53 C ATOM 255 CB PRO 34 0.411 42.710 29.263 1.00154.53 C ATOM 256 CG PRO 34 0.250 41.286 28.690 1.00154.53 C ATOM 257 C PRO 34 -0.785 44.887 28.673 1.00154.53 C ATOM 258 O PRO 34 -0.880 45.603 29.670 1.00154.53 O ATOM 259 N PHE 35 -0.599 45.365 27.430 1.00127.28 N ATOM 260 CA PHE 35 -0.525 46.773 27.194 1.00127.28 C ATOM 261 CB PHE 35 -0.063 47.103 25.764 1.00127.28 C ATOM 262 CG PHE 35 1.363 46.670 25.665 1.00127.28 C ATOM 263 CD1 PHE 35 1.693 45.361 25.389 1.00127.28 C ATOM 264 CD2 PHE 35 2.374 47.578 25.869 1.00127.28 C ATOM 265 CE1 PHE 35 3.009 44.969 25.308 1.00127.28 C ATOM 266 CE2 PHE 35 3.691 47.196 25.789 1.00127.28 C ATOM 267 CZ PHE 35 4.012 45.889 25.507 1.00127.28 C ATOM 268 C PHE 35 -1.896 47.331 27.410 1.00127.28 C ATOM 269 O PHE 35 -2.887 46.815 26.896 1.00127.28 O ATOM 270 N TRP 36 -1.970 48.413 28.205 1.00234.32 N ATOM 271 CA TRP 36 -3.208 49.052 28.540 1.00234.32 C ATOM 272 CB TRP 36 -3.924 48.464 29.769 1.00234.32 C ATOM 273 CG TRP 36 -4.836 47.278 29.572 1.00234.32 C ATOM 274 CD2 TRP 36 -5.194 46.394 30.642 1.00234.32 C ATOM 275 CD1 TRP 36 -5.503 46.842 28.463 1.00234.32 C ATOM 276 NE1 TRP 36 -6.275 45.750 28.783 1.00234.32 N ATOM 277 CE2 TRP 36 -6.091 45.459 30.121 1.00234.32 C ATOM 278 CE3 TRP 36 -4.805 46.362 31.950 1.00234.32 C ATOM 279 CZ2 TRP 36 -6.614 44.474 30.911 1.00234.32 C ATOM 280 CZ3 TRP 36 -5.337 45.370 32.744 1.00234.32 C ATOM 281 CH2 TRP 36 -6.225 44.448 32.233 1.00234.32 C ATOM 282 C TRP 36 -2.894 50.434 28.975 1.00234.32 C ATOM 283 O TRP 36 -1.888 51.034 28.592 1.00234.32 O ATOM 284 N ILE 37 -3.811 50.972 29.792 1.00189.41 N ATOM 285 CA ILE 37 -3.641 52.245 30.408 1.00189.41 C ATOM 286 CB ILE 37 -4.798 52.580 31.303 1.00189.41 C ATOM 287 CG1 ILE 37 -4.507 53.879 32.057 1.00189.41 C ATOM 288 CG2 ILE 37 -5.098 51.372 32.207 1.00189.41 C ATOM 289 CD1 ILE 37 -4.336 55.062 31.122 1.00189.41 C ATOM 290 C ILE 37 -2.421 52.129 31.254 1.00189.41 C ATOM 291 O ILE 37 -1.564 53.011 31.277 1.00189.41 O ATOM 292 N SER 38 -2.311 50.988 31.951 1.00 73.66 N ATOM 293 CA SER 38 -1.213 50.740 32.833 1.00 73.66 C ATOM 294 CB SER 38 -1.379 49.427 33.614 1.00 73.66 C ATOM 295 OG SER 38 -0.268 49.239 34.477 1.00 73.66 O ATOM 296 C SER 38 0.026 50.631 31.997 1.00 73.66 C ATOM 297 O SER 38 1.139 50.812 32.490 1.00 73.66 O ATOM 298 N SER 39 -0.140 50.357 30.691 1.00134.76 N ATOM 299 CA SER 39 1.002 50.185 29.847 1.00134.76 C ATOM 300 CB SER 39 0.649 49.847 28.395 1.00134.76 C ATOM 301 OG SER 39 1.849 49.627 27.671 1.00134.76 O ATOM 302 C SER 39 1.773 51.463 29.835 1.00134.76 C ATOM 303 O SER 39 2.974 51.456 29.571 1.00134.76 O ATOM 304 N PHE 40 1.107 52.596 30.135 1.00138.02 N ATOM 305 CA PHE 40 1.780 53.866 30.148 1.00138.02 C ATOM 306 CB PHE 40 3.092 53.811 30.974 1.00138.02 C ATOM 307 CG PHE 40 3.825 55.117 30.984 1.00138.02 C ATOM 308 CD1 PHE 40 3.427 56.148 31.799 1.00138.02 C ATOM 309 CD2 PHE 40 4.932 55.304 30.181 1.00138.02 C ATOM 310 CE1 PHE 40 4.118 57.337 31.806 1.00138.02 C ATOM 311 CE2 PHE 40 5.629 56.489 30.181 1.00138.02 C ATOM 312 CZ PHE 40 5.218 57.513 30.998 1.00138.02 C ATOM 313 C PHE 40 2.101 54.204 28.733 1.00138.02 C ATOM 314 O PHE 40 2.793 55.181 28.450 1.00138.02 O ATOM 315 N ILE 41 1.561 53.423 27.782 1.00105.37 N ATOM 316 CA ILE 41 1.822 53.777 26.424 1.00105.37 C ATOM 317 CB ILE 41 2.757 52.842 25.707 1.00105.37 C ATOM 318 CG1 ILE 41 3.146 53.439 24.344 1.00105.37 C ATOM 319 CG2 ILE 41 2.082 51.464 25.580 1.00105.37 C ATOM 320 CD1 ILE 41 4.344 52.746 23.698 1.00105.37 C ATOM 321 C ILE 41 0.525 53.772 25.696 1.00105.37 C ATOM 322 O ILE 41 -0.275 52.846 25.823 1.00105.37 O ATOM 323 N GLY 42 0.278 54.845 24.921 1.00 66.38 N ATOM 324 CA GLY 42 -0.904 54.919 24.119 1.00 66.38 C ATOM 325 C GLY 42 -1.980 55.553 24.930 1.00 66.38 C ATOM 326 O GLY 42 -1.951 55.520 26.158 1.00 66.38 O ATOM 327 N ARG 43 -2.976 56.144 24.247 1.00135.37 N ATOM 328 CA ARG 43 -4.057 56.760 24.944 1.00135.37 C ATOM 329 CB ARG 43 -4.098 58.288 24.773 1.00135.37 C ATOM 330 CG ARG 43 -2.969 59.019 25.507 1.00135.37 C ATOM 331 CD ARG 43 -1.558 58.685 25.020 1.00135.37 C ATOM 332 NE ARG 43 -0.619 59.483 25.857 1.00135.37 N ATOM 333 CZ ARG 43 0.693 59.119 25.943 1.00135.37 C ATOM 334 NH1 ARG 43 1.141 58.018 25.268 1.00135.37 N ATOM 335 NH2 ARG 43 1.556 59.853 26.704 1.00135.37 N ATOM 336 C ARG 43 -5.309 56.207 24.366 1.00135.37 C ATOM 337 O ARG 43 -5.409 55.979 23.158 1.00135.37 O ATOM 338 N SER 44 -6.297 55.949 25.231 1.00 79.81 N ATOM 339 CA SER 44 -7.525 55.410 24.747 1.00 79.81 C ATOM 340 CB SER 44 -7.686 53.901 24.982 1.00 79.81 C ATOM 341 OG SER 44 -8.938 53.474 24.463 1.00 79.81 O ATOM 342 C SER 44 -8.609 56.086 25.502 1.00 79.81 C ATOM 343 O SER 44 -8.368 56.721 26.530 1.00 79.81 O ATOM 344 N LYS 45 -9.849 55.977 25.002 1.00 72.13 N ATOM 345 CA LYS 45 -10.905 56.614 25.718 1.00 72.13 C ATOM 346 CB LYS 45 -12.286 56.518 25.049 1.00 72.13 C ATOM 347 CG LYS 45 -12.421 57.409 23.816 1.00 72.13 C ATOM 348 CD LYS 45 -13.732 57.222 23.053 1.00 72.13 C ATOM 349 CE LYS 45 -13.863 58.159 21.850 1.00 72.13 C ATOM 350 NZ LYS 45 -15.160 57.943 21.171 1.00 72.13 N ATOM 351 C LYS 45 -10.985 55.961 27.050 1.00 72.13 C ATOM 352 O LYS 45 -11.052 54.737 27.169 1.00 72.13 O TER END