####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS431_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS431_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 21 - 45 4.93 17.32 LCS_AVERAGE: 47.31 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 2 - 8 1.32 28.52 LONGEST_CONTINUOUS_SEGMENT: 7 4 - 10 1.85 22.27 LONGEST_CONTINUOUS_SEGMENT: 7 7 - 13 1.37 22.89 LCS_AVERAGE: 12.91 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 4 - 8 0.61 26.02 LONGEST_CONTINUOUS_SEGMENT: 5 7 - 11 0.88 23.53 LONGEST_CONTINUOUS_SEGMENT: 5 8 - 12 0.84 21.37 LCS_AVERAGE: 8.68 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 7 13 0 4 5 6 7 7 8 8 9 9 10 12 12 12 13 13 16 16 16 16 LCS_GDT V 3 V 3 4 7 15 3 4 4 6 7 7 8 8 9 9 10 12 12 12 13 14 16 16 17 19 LCS_GDT Q 4 Q 4 5 7 15 3 5 5 6 7 8 9 10 10 11 12 13 14 14 16 18 19 20 20 21 LCS_GDT G 5 G 5 5 7 15 3 5 5 6 7 8 9 10 10 11 12 13 14 14 16 18 19 20 20 21 LCS_GDT P 6 P 6 5 7 15 3 5 5 6 7 8 9 10 10 11 12 13 14 14 16 18 19 20 20 21 LCS_GDT W 7 W 7 5 7 15 4 5 6 7 7 8 9 10 10 11 12 13 14 14 16 18 19 20 20 21 LCS_GDT V 8 V 8 5 7 15 4 5 6 7 7 7 9 10 10 11 12 13 14 14 16 18 19 20 20 20 LCS_GDT G 9 G 9 5 7 15 4 4 6 7 7 8 9 10 10 11 12 13 14 14 16 18 19 20 20 21 LCS_GDT S 10 S 10 5 7 15 4 4 6 7 7 8 9 10 10 11 12 13 14 14 16 18 19 20 20 21 LCS_GDT S 11 S 11 5 7 15 4 4 6 7 7 8 9 10 10 11 12 13 14 14 16 18 19 20 20 21 LCS_GDT Y 12 Y 12 5 7 15 4 4 6 7 7 8 9 10 10 10 11 13 14 14 16 18 19 20 20 21 LCS_GDT V 13 V 13 3 7 15 3 3 3 7 7 7 9 10 10 11 12 14 16 17 18 20 20 23 27 29 LCS_GDT A 14 A 14 3 4 15 3 3 5 7 7 7 8 9 11 11 13 15 17 17 19 22 25 28 30 31 LCS_GDT E 15 E 15 3 5 15 3 3 4 4 5 7 8 9 11 11 13 15 17 17 19 22 25 27 30 31 LCS_GDT T 16 T 16 3 5 15 3 3 3 4 5 6 7 9 11 11 13 15 17 17 19 22 25 28 30 31 LCS_GDT G 17 G 17 3 5 15 3 3 4 4 4 6 6 8 9 10 12 13 15 16 18 20 23 27 30 31 LCS_GDT Q 18 Q 18 3 5 15 3 3 4 4 4 6 7 8 9 10 12 14 16 17 18 22 25 28 30 31 LCS_GDT N 19 N 19 4 5 17 3 4 5 5 5 6 7 8 11 11 15 18 20 22 24 25 26 28 30 31 LCS_GDT W 20 W 20 4 5 21 3 4 5 5 5 7 9 13 14 17 19 20 21 24 25 26 26 28 30 31 LCS_GDT A 21 A 21 4 5 25 3 4 5 5 5 7 9 13 14 18 19 20 22 24 25 26 26 28 30 31 LCS_GDT S 22 S 22 4 6 25 3 4 5 5 6 7 7 10 13 17 18 20 22 24 25 26 26 28 30 31 LCS_GDT L 23 L 23 4 6 25 3 4 4 5 6 7 9 13 16 18 19 20 22 24 25 26 26 28 30 31 LCS_GDT A 24 A 24 4 6 25 3 3 4 4 7 8 11 13 16 18 19 20 22 24 25 26 26 28 30 31 LCS_GDT A 25 A 25 4 6 25 3 3 4 5 6 8 10 12 16 18 19 20 22 24 25 26 26 28 30 31 LCS_GDT N 26 N 26 4 6 25 3 3 4 4 6 7 8 10 12 17 18 20 22 24 25 26 26 28 30 31 LCS_GDT E 27 E 27 4 6 25 3 3 4 4 6 7 8 11 12 17 18 19 22 24 25 26 26 27 28 30 LCS_GDT L 28 L 28 4 4 25 3 3 4 4 6 6 7 8 12 17 18 19 22 24 25 26 26 28 30 31 LCS_GDT R 29 R 29 4 4 25 3 3 4 4 6 7 9 13 16 18 19 20 22 24 25 26 26 28 30 31 LCS_GDT V 30 V 30 3 5 25 3 3 4 5 7 8 11 13 16 18 19 20 22 24 25 26 26 28 30 31 LCS_GDT T 31 T 31 3 6 25 3 3 4 6 7 8 11 13 16 18 19 20 22 24 25 26 26 28 30 31 LCS_GDT E 32 E 32 3 6 25 3 3 4 6 7 8 11 13 16 18 19 20 22 24 25 26 26 28 30 31 LCS_GDT R 33 R 33 3 6 25 3 3 5 6 6 8 11 13 16 18 19 20 22 24 25 26 26 28 30 31 LCS_GDT P 34 P 34 4 6 25 3 3 5 7 7 7 8 9 12 14 18 19 21 23 25 26 26 28 30 31 LCS_GDT F 35 F 35 4 6 25 4 4 5 7 7 8 9 13 16 17 18 20 22 24 25 26 26 28 30 31 LCS_GDT W 36 W 36 4 6 25 4 4 5 7 7 8 11 13 16 18 19 20 22 24 25 26 26 28 30 31 LCS_GDT I 37 I 37 4 6 25 4 4 5 7 7 8 10 13 16 18 19 20 22 24 25 26 26 28 30 31 LCS_GDT S 38 S 38 4 6 25 4 4 5 7 7 8 11 13 16 18 19 20 22 24 25 26 26 28 30 31 LCS_GDT S 39 S 39 3 6 25 3 3 3 7 7 7 8 9 11 15 18 19 22 24 25 26 26 28 30 31 LCS_GDT F 40 F 40 3 4 25 3 3 5 5 6 8 10 13 16 18 19 20 22 24 25 26 26 28 30 31 LCS_GDT I 41 I 41 3 4 25 3 3 4 4 7 8 11 13 16 18 19 20 22 24 25 26 26 28 30 31 LCS_GDT G 42 G 42 3 4 25 3 3 3 4 7 8 11 13 16 18 19 20 22 24 25 26 26 28 30 31 LCS_GDT R 43 R 43 3 4 25 3 3 4 4 7 8 11 13 16 18 19 20 22 24 25 26 26 28 30 31 LCS_GDT S 44 S 44 3 4 25 3 3 4 4 7 8 11 13 16 18 19 20 22 24 25 26 26 28 30 31 LCS_GDT K 45 K 45 3 4 25 0 3 5 5 6 8 10 12 16 18 19 20 22 24 25 26 26 27 29 31 LCS_AVERAGE LCS_A: 22.97 ( 8.68 12.91 47.31 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 6 7 7 8 11 13 16 18 19 20 22 24 25 26 26 28 30 31 GDT PERCENT_AT 9.09 11.36 13.64 15.91 15.91 18.18 25.00 29.55 36.36 40.91 43.18 45.45 50.00 54.55 56.82 59.09 59.09 63.64 68.18 70.45 GDT RMS_LOCAL 0.31 0.61 1.09 1.37 1.32 1.94 2.56 2.89 3.36 3.82 4.02 4.16 4.46 4.77 4.91 5.09 5.09 6.77 7.14 7.22 GDT RMS_ALL_AT 24.96 26.02 22.22 22.89 28.52 16.69 18.46 17.57 17.64 17.09 16.87 17.04 17.29 17.27 17.01 17.04 17.04 14.99 14.94 15.05 # Checking swapping # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 44.615 0 0.560 0.573 45.939 0.000 0.000 - LGA V 3 V 3 37.904 0 0.092 1.039 40.471 0.000 0.000 37.144 LGA Q 4 Q 4 32.710 0 0.052 0.889 38.866 0.000 0.000 36.078 LGA G 5 G 5 27.296 0 0.088 0.088 29.268 0.000 0.000 - LGA P 6 P 6 22.127 0 0.123 0.448 24.108 0.000 0.000 21.442 LGA W 7 W 7 24.073 0 0.360 1.277 26.653 0.000 0.000 22.200 LGA V 8 V 8 25.567 0 0.030 0.229 27.237 0.000 0.000 26.513 LGA G 9 G 9 21.517 0 0.273 0.273 23.034 0.000 0.000 - LGA S 10 S 10 25.313 0 0.040 0.101 28.310 0.000 0.000 26.017 LGA S 11 S 11 28.745 0 0.196 0.593 30.540 0.000 0.000 30.143 LGA Y 12 Y 12 26.678 0 0.604 0.729 27.193 0.000 0.000 21.797 LGA V 13 V 13 24.368 0 0.582 0.676 25.165 0.000 0.000 24.422 LGA A 14 A 14 23.161 0 0.396 0.374 23.235 0.000 0.000 - LGA E 15 E 15 22.120 0 0.614 1.045 25.130 0.000 0.000 24.388 LGA T 16 T 16 19.575 0 0.013 0.181 20.466 0.000 0.000 16.590 LGA G 17 G 17 22.025 0 0.087 0.087 22.507 0.000 0.000 - LGA Q 18 Q 18 20.053 0 0.674 1.032 26.366 0.000 0.000 25.099 LGA N 19 N 19 13.670 0 0.613 1.088 17.075 0.000 0.000 17.075 LGA W 20 W 20 9.380 0 0.051 0.413 10.834 0.000 0.000 10.711 LGA A 21 A 21 8.570 0 0.038 0.050 9.224 0.000 0.000 - LGA S 22 S 22 9.624 0 0.610 0.810 12.141 0.000 0.000 12.141 LGA L 23 L 23 7.450 0 0.609 0.772 11.562 0.000 0.000 11.562 LGA A 24 A 24 2.826 0 0.227 0.238 4.160 15.455 22.545 - LGA A 25 A 25 6.839 0 0.109 0.106 8.995 0.000 0.000 - LGA N 26 N 26 9.359 0 0.611 1.242 10.784 0.000 0.000 8.296 LGA E 27 E 27 8.578 0 0.076 1.187 16.309 0.000 0.000 15.979 LGA L 28 L 28 6.587 0 0.144 0.135 10.632 0.000 0.000 8.641 LGA R 29 R 29 3.549 0 0.276 1.343 5.890 19.545 12.397 4.306 LGA V 30 V 30 3.470 0 0.640 1.065 7.284 25.455 14.545 7.284 LGA T 31 T 31 2.458 0 0.111 0.995 4.896 44.545 32.208 2.912 LGA E 32 E 32 1.420 0 0.472 1.538 5.582 51.818 34.141 4.607 LGA R 33 R 33 4.628 0 0.074 1.086 8.865 3.182 4.793 7.096 LGA P 34 P 34 9.054 0 0.620 0.577 11.940 0.000 0.000 11.940 LGA F 35 F 35 6.022 0 0.073 1.514 6.324 5.909 2.314 5.217 LGA W 36 W 36 3.142 0 0.056 1.078 6.279 15.909 5.714 6.238 LGA I 37 I 37 3.668 0 0.140 1.403 9.418 20.455 10.227 9.418 LGA S 38 S 38 2.756 0 0.672 0.831 3.737 21.818 27.576 2.501 LGA S 39 S 39 6.813 0 0.539 0.722 10.684 0.000 0.000 10.684 LGA F 40 F 40 3.763 0 0.639 1.474 10.890 23.636 9.091 10.529 LGA I 41 I 41 1.664 0 0.061 1.122 7.453 54.545 32.045 7.453 LGA G 42 G 42 2.837 0 0.676 0.676 3.907 23.182 23.182 - LGA R 43 R 43 3.194 0 0.563 0.945 5.298 17.273 9.091 4.420 LGA S 44 S 44 1.204 0 0.626 0.731 5.535 35.455 28.485 3.652 LGA K 45 K 45 6.695 0 0.039 0.745 17.115 1.364 0.606 17.115 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 12.486 12.316 12.508 8.626 6.113 2.234 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 13 2.89 28.977 25.138 0.435 LGA_LOCAL RMSD: 2.885 Number of atoms: 13 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 17.570 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 12.486 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.193121 * X + 0.977520 * Y + 0.084607 * Z + 3.589986 Y_new = 0.978163 * X + -0.198562 * Y + 0.061397 * Z + 27.548208 Z_new = 0.076817 * X + 0.070902 * Y + -0.994521 * Z + 0.629965 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.375871 -0.076892 3.070421 [DEG: 78.8316 -4.4056 175.9221 ] ZXZ: 2.198549 3.036865 0.825417 [DEG: 125.9676 173.9995 47.2929 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS431_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS431_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 13 2.89 25.138 12.49 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS431_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 20 N ALA 2 -9.545 29.516 -26.420 1.00 4.37 ATOM 22 CA ALA 2 -9.824 28.415 -25.506 1.00 4.37 ATOM 24 CB ALA 2 -9.484 27.116 -26.221 1.00 4.37 ATOM 28 C ALA 2 -9.028 28.523 -24.195 1.00 4.37 ATOM 29 O ALA 2 -9.597 28.530 -23.107 1.00 4.37 ATOM 30 N VAL 3 -7.709 28.570 -24.331 1.00 2.84 ATOM 32 CA VAL 3 -6.815 27.988 -23.336 1.00 2.84 ATOM 34 CB VAL 3 -6.144 26.748 -23.938 1.00 2.84 ATOM 36 CG1 VAL 3 -5.151 27.058 -25.051 1.00 2.84 ATOM 40 CG2 VAL 3 -5.473 25.898 -22.878 1.00 2.84 ATOM 44 C VAL 3 -5.873 29.013 -22.740 1.00 2.84 ATOM 45 O VAL 3 -5.607 30.068 -23.306 1.00 2.84 ATOM 46 N GLN 4 -5.396 28.713 -21.551 1.00 2.06 ATOM 48 CA GLN 4 -4.574 29.614 -20.772 1.00 2.06 ATOM 50 CB GLN 4 -5.401 30.230 -19.638 1.00 2.06 ATOM 53 CG GLN 4 -6.591 31.096 -20.118 1.00 2.06 ATOM 56 CD GLN 4 -7.766 30.298 -20.680 1.00 2.06 ATOM 57 OE1 GLN 4 -8.045 29.168 -20.291 1.00 2.06 ATOM 58 NE2 GLN 4 -8.501 30.824 -21.625 1.00 2.06 ATOM 61 C GLN 4 -3.351 28.854 -20.293 1.00 2.06 ATOM 62 O GLN 4 -3.349 27.624 -20.248 1.00 2.06 ATOM 63 N GLY 5 -2.303 29.594 -19.977 1.00 1.94 ATOM 65 CA GLY 5 -0.965 29.083 -19.694 1.00 1.94 ATOM 68 C GLY 5 -0.032 30.255 -19.391 1.00 1.94 ATOM 69 O GLY 5 -0.503 31.376 -19.211 1.00 1.94 ATOM 70 N PRO 6 1.301 30.030 -19.362 1.00 1.88 ATOM 71 CD PRO 6 1.955 28.768 -19.646 1.00 1.88 ATOM 74 CG PRO 6 3.327 28.863 -18.970 1.00 1.88 ATOM 77 CB PRO 6 3.636 30.362 -19.042 1.00 1.88 ATOM 80 CA PRO 6 2.262 31.017 -18.847 1.00 1.88 ATOM 82 C PRO 6 2.193 32.410 -19.501 1.00 1.88 ATOM 83 O PRO 6 2.349 33.420 -18.822 1.00 1.88 ATOM 84 N TRP 7 1.903 32.478 -20.809 1.00 1.81 ATOM 86 CA TRP 7 1.796 33.745 -21.564 1.00 1.81 ATOM 88 CB TRP 7 1.963 33.473 -23.075 1.00 1.81 ATOM 91 CG TRP 7 1.496 32.128 -23.519 1.00 1.81 ATOM 92 CD1 TRP 7 2.305 31.105 -23.856 1.00 1.81 ATOM 94 NE1 TRP 7 1.559 29.971 -24.069 1.00 1.81 ATOM 96 CE2 TRP 7 0.220 30.199 -23.878 1.00 1.81 ATOM 97 CZ2 TRP 7 -0.895 29.371 -23.933 1.00 1.81 ATOM 99 CH2 TRP 7 -2.158 29.930 -23.714 1.00 1.81 ATOM 101 CZ3 TRP 7 -2.276 31.304 -23.459 1.00 1.81 ATOM 103 CE3 TRP 7 -1.143 32.127 -23.382 1.00 1.81 ATOM 105 CD2 TRP 7 0.144 31.592 -23.577 1.00 1.81 ATOM 106 C TRP 7 0.530 34.565 -21.279 1.00 1.81 ATOM 107 O TRP 7 0.445 35.701 -21.729 1.00 1.81 ATOM 108 N VAL 8 -0.440 34.042 -20.509 1.00 1.70 ATOM 110 CA VAL 8 -1.528 34.878 -19.957 1.00 1.70 ATOM 112 CB VAL 8 -2.784 34.056 -19.612 1.00 1.70 ATOM 114 CG1 VAL 8 -4.014 34.943 -19.350 1.00 1.70 ATOM 118 CG2 VAL 8 -3.180 33.152 -20.767 1.00 1.70 ATOM 122 C VAL 8 -1.044 35.636 -18.723 1.00 1.70 ATOM 123 O VAL 8 -1.454 36.773 -18.496 1.00 1.70 ATOM 124 N GLY 9 -0.113 35.055 -17.955 1.00 2.20 ATOM 126 CA GLY 9 0.411 35.610 -16.710 1.00 2.20 ATOM 129 C GLY 9 1.086 36.979 -16.830 1.00 2.20 ATOM 130 O GLY 9 1.385 37.606 -15.810 1.00 2.20 ATOM 131 N SER 10 1.315 37.469 -18.047 1.00 2.36 ATOM 133 CA SER 10 1.841 38.798 -18.332 1.00 2.36 ATOM 135 CB SER 10 2.490 38.779 -19.716 1.00 2.36 ATOM 138 OG SER 10 1.529 38.390 -20.677 1.00 2.36 ATOM 140 C SER 10 0.784 39.912 -18.273 1.00 2.36 ATOM 141 O SER 10 1.153 41.083 -18.099 1.00 2.36 ATOM 142 N SER 11 -0.514 39.608 -18.432 1.00 1.90 ATOM 144 CA SER 11 -1.562 40.627 -18.619 1.00 1.90 ATOM 146 CB SER 11 -2.613 40.136 -19.614 1.00 1.90 ATOM 149 OG SER 11 -3.362 39.056 -19.081 1.00 1.90 ATOM 151 C SER 11 -2.197 41.141 -17.314 1.00 1.90 ATOM 152 O SER 11 -2.982 42.096 -17.352 1.00 1.90 ATOM 153 N TYR 12 -1.843 40.573 -16.173 1.00 1.31 ATOM 155 CA TYR 12 -2.321 40.961 -14.842 1.00 1.31 ATOM 157 CB TYR 12 -3.683 40.290 -14.587 1.00 1.31 ATOM 160 CG TYR 12 -3.551 38.797 -14.518 1.00 1.31 ATOM 161 CD1 TYR 12 -3.200 38.192 -13.298 1.00 1.31 ATOM 163 CE1 TYR 12 -2.742 36.874 -13.290 1.00 1.31 ATOM 165 CZ TYR 12 -2.677 36.158 -14.495 1.00 1.31 ATOM 166 OH TYR 12 -2.187 34.904 -14.471 1.00 1.31 ATOM 168 CE2 TYR 12 -3.119 36.728 -15.694 1.00 1.31 ATOM 170 CD2 TYR 12 -3.552 38.062 -15.709 1.00 1.31 ATOM 172 C TYR 12 -1.286 40.600 -13.751 1.00 1.31 ATOM 173 O TYR 12 -0.188 40.110 -14.050 1.00 1.31 ATOM 174 N VAL 13 -1.619 40.873 -12.486 1.00 1.26 ATOM 176 CA VAL 13 -0.688 40.825 -11.354 1.00 1.26 ATOM 178 CB VAL 13 -0.623 42.199 -10.660 1.00 1.26 ATOM 180 CG1 VAL 13 0.638 42.313 -9.812 1.00 1.26 ATOM 184 CG2 VAL 13 -0.590 43.374 -11.640 1.00 1.26 ATOM 188 C VAL 13 -1.067 39.717 -10.358 1.00 1.26 ATOM 189 O VAL 13 -2.125 39.765 -9.741 1.00 1.26 ATOM 190 N ALA 14 -0.177 38.729 -10.162 1.00 0.94 ATOM 192 CA ALA 14 -0.361 37.608 -9.222 1.00 0.94 ATOM 194 CB ALA 14 0.195 36.333 -9.877 1.00 0.94 ATOM 198 C ALA 14 0.209 37.895 -7.808 1.00 0.94 ATOM 199 O ALA 14 0.792 37.014 -7.169 1.00 0.94 ATOM 200 N GLU 15 0.111 39.145 -7.337 1.00 1.10 ATOM 202 CA GLU 15 0.637 39.531 -6.022 1.00 1.10 ATOM 204 CB GLU 15 1.144 40.982 -5.989 1.00 1.10 ATOM 207 CG GLU 15 0.078 42.074 -6.013 1.00 1.10 ATOM 210 CD GLU 15 0.736 43.446 -5.741 1.00 1.10 ATOM 211 OE1 GLU 15 1.068 44.182 -6.703 1.00 1.10 ATOM 212 OE2 GLU 15 0.918 43.808 -4.557 1.00 1.10 ATOM 213 C GLU 15 -0.310 39.167 -4.858 1.00 1.10 ATOM 214 O GLU 15 -1.536 39.115 -5.026 1.00 1.10 ATOM 215 N THR 16 0.251 38.922 -3.679 1.00 1.55 ATOM 217 CA THR 16 -0.471 38.410 -2.495 1.00 1.55 ATOM 219 CB THR 16 0.521 37.935 -1.424 1.00 1.55 ATOM 221 CG2 THR 16 1.276 36.673 -1.830 1.00 1.55 ATOM 225 OG1 THR 16 1.488 38.936 -1.230 1.00 1.55 ATOM 227 C THR 16 -1.408 39.422 -1.838 1.00 1.55 ATOM 228 O THR 16 -2.273 39.012 -1.073 1.00 1.55 ATOM 229 N GLY 17 -1.266 40.716 -2.139 1.00 1.67 ATOM 231 CA GLY 17 -1.845 41.822 -1.355 1.00 1.67 ATOM 234 C GLY 17 -3.380 41.912 -1.239 1.00 1.67 ATOM 235 O GLY 17 -3.859 42.710 -0.436 1.00 1.67 ATOM 236 N GLN 18 -4.154 41.110 -1.978 1.00 1.61 ATOM 238 CA GLN 18 -5.611 40.971 -1.748 1.00 1.61 ATOM 240 CB GLN 18 -6.304 40.524 -3.042 1.00 1.61 ATOM 243 CG GLN 18 -6.367 41.651 -4.083 1.00 1.61 ATOM 246 CD GLN 18 -5.813 41.186 -5.412 1.00 1.61 ATOM 247 OE1 GLN 18 -6.511 40.666 -6.278 1.00 1.61 ATOM 248 NE2 GLN 18 -4.523 41.316 -5.626 1.00 1.61 ATOM 251 C GLN 18 -5.948 39.968 -0.622 1.00 1.61 ATOM 252 O GLN 18 -7.057 39.981 -0.092 1.00 1.61 ATOM 253 N ASN 19 -4.994 39.097 -0.273 1.00 0.83 ATOM 255 CA ASN 19 -5.119 38.023 0.706 1.00 0.83 ATOM 257 CB ASN 19 -4.718 36.688 0.034 1.00 0.83 ATOM 260 CG ASN 19 -5.519 36.372 -1.220 1.00 0.83 ATOM 261 OD1 ASN 19 -6.731 36.576 -1.291 1.00 0.83 ATOM 262 ND2 ASN 19 -4.880 35.877 -2.252 1.00 0.83 ATOM 265 C ASN 19 -4.268 38.329 1.953 1.00 0.83 ATOM 266 O ASN 19 -3.611 39.379 2.044 1.00 0.83 ATOM 267 N TRP 20 -4.239 37.401 2.904 1.00 0.63 ATOM 269 CA TRP 20 -3.316 37.466 4.042 1.00 0.63 ATOM 271 CB TRP 20 -3.759 36.477 5.120 1.00 0.63 ATOM 274 CG TRP 20 -5.231 36.430 5.394 1.00 0.63 ATOM 275 CD1 TRP 20 -6.007 35.334 5.280 1.00 0.63 ATOM 277 NE1 TRP 20 -7.315 35.651 5.581 1.00 0.63 ATOM 279 CE2 TRP 20 -7.448 36.980 5.913 1.00 0.63 ATOM 280 CZ2 TRP 20 -8.545 37.759 6.300 1.00 0.63 ATOM 282 CH2 TRP 20 -8.351 39.120 6.582 1.00 0.63 ATOM 284 CZ3 TRP 20 -7.063 39.681 6.475 1.00 0.63 ATOM 286 CE3 TRP 20 -5.967 38.892 6.087 1.00 0.63 ATOM 288 CD2 TRP 20 -6.134 37.517 5.797 1.00 0.63 ATOM 289 C TRP 20 -1.899 37.172 3.572 1.00 0.63 ATOM 290 O TRP 20 -1.629 36.063 3.094 1.00 0.63 ATOM 291 N ALA 21 -0.972 38.113 3.719 1.00 0.50 ATOM 293 CA ALA 21 0.447 37.887 3.413 1.00 0.50 ATOM 295 CB ALA 21 1.019 39.189 2.838 1.00 0.50 ATOM 299 C ALA 21 1.208 37.394 4.654 1.00 0.50 ATOM 300 O ALA 21 2.050 36.511 4.540 1.00 0.50 ATOM 301 N SER 22 0.861 37.921 5.843 1.00 0.46 ATOM 303 CA SER 22 1.406 37.488 7.130 1.00 0.46 ATOM 305 CB SER 22 2.038 38.687 7.841 1.00 0.46 ATOM 308 OG SER 22 2.527 38.276 9.114 1.00 0.46 ATOM 310 C SER 22 0.331 36.835 7.984 1.00 0.46 ATOM 311 O SER 22 -0.757 37.376 8.136 1.00 0.46 ATOM 312 N LEU 23 0.635 35.667 8.561 1.00 0.44 ATOM 314 CA LEU 23 -0.262 34.869 9.391 1.00 0.44 ATOM 316 CB LEU 23 -0.764 33.629 8.608 1.00 0.44 ATOM 319 CG LEU 23 -1.478 33.916 7.268 1.00 0.44 ATOM 321 CD1 LEU 23 -0.530 33.874 6.069 1.00 0.44 ATOM 325 CD2 LEU 23 -2.563 32.863 7.010 1.00 0.44 ATOM 329 C LEU 23 0.488 34.487 10.678 1.00 0.44 ATOM 330 O LEU 23 1.399 33.676 10.645 1.00 0.44 ATOM 331 N ALA 24 0.153 35.151 11.786 1.00 0.49 ATOM 333 CA ALA 24 0.780 35.035 13.119 1.00 0.49 ATOM 335 CB ALA 24 0.342 33.720 13.785 1.00 0.49 ATOM 339 C ALA 24 2.290 35.302 13.214 1.00 0.49 ATOM 340 O ALA 24 2.851 35.177 14.300 1.00 0.49 ATOM 341 N ALA 25 2.975 35.662 12.118 1.00 0.50 ATOM 343 CA ALA 25 4.389 36.077 12.123 1.00 0.50 ATOM 345 CB ALA 25 4.985 35.709 10.764 1.00 0.50 ATOM 349 C ALA 25 4.556 37.564 12.430 1.00 0.50 ATOM 350 O ALA 25 5.595 37.974 12.926 1.00 0.50 ATOM 351 N ASN 26 3.535 38.380 12.152 1.00 0.65 ATOM 353 CA ASN 26 3.472 39.807 12.497 1.00 0.65 ATOM 355 CB ASN 26 2.284 40.438 11.741 1.00 0.65 ATOM 358 CG ASN 26 0.941 39.788 12.079 1.00 0.65 ATOM 359 OD1 ASN 26 0.361 40.067 13.103 1.00 0.65 ATOM 360 ND2 ASN 26 0.462 38.894 11.249 1.00 0.65 ATOM 363 C ASN 26 3.333 40.013 14.006 1.00 0.65 ATOM 364 O ASN 26 2.830 39.147 14.704 1.00 0.65 ATOM 365 N GLU 27 3.695 41.178 14.531 1.00 0.90 ATOM 367 CA GLU 27 3.444 41.505 15.947 1.00 0.90 ATOM 369 CB GLU 27 4.513 42.470 16.460 1.00 0.90 ATOM 372 CG GLU 27 4.434 43.881 15.867 1.00 0.90 ATOM 375 CD GLU 27 5.579 44.770 16.391 1.00 0.90 ATOM 376 OE1 GLU 27 5.798 44.833 17.630 1.00 0.90 ATOM 377 OE2 GLU 27 6.271 45.413 15.564 1.00 0.90 ATOM 378 C GLU 27 2.014 42.020 16.230 1.00 0.90 ATOM 379 O GLU 27 1.607 42.092 17.386 1.00 0.90 ATOM 380 N LEU 28 1.219 42.320 15.195 1.00 0.98 ATOM 382 CA LEU 28 -0.142 42.865 15.324 1.00 0.98 ATOM 384 CB LEU 28 -0.681 43.295 13.937 1.00 0.98 ATOM 387 CG LEU 28 0.135 44.386 13.219 1.00 0.98 ATOM 389 CD1 LEU 28 -0.459 44.643 11.837 1.00 0.98 ATOM 393 CD2 LEU 28 0.143 45.705 13.985 1.00 0.98 ATOM 397 C LEU 28 -1.125 41.892 15.995 1.00 0.98 ATOM 398 O LEU 28 -2.147 42.339 16.519 1.00 0.98 ATOM 399 N ARG 29 -0.812 40.588 16.062 1.00 0.98 ATOM 401 CA ARG 29 -1.688 39.576 16.699 1.00 0.98 ATOM 403 CB ARG 29 -1.155 38.139 16.475 1.00 0.98 ATOM 406 CG ARG 29 -0.064 37.604 17.419 1.00 0.98 ATOM 409 CD ARG 29 1.366 37.879 16.955 1.00 0.98 ATOM 412 NE ARG 29 2.359 37.313 17.899 1.00 0.98 ATOM 414 CZ ARG 29 3.677 37.300 17.739 1.00 0.98 ATOM 415 NH1 ARG 29 4.439 36.860 18.692 1.00 0.98 ATOM 418 NH2 ARG 29 4.233 37.727 16.636 1.00 0.98 ATOM 421 C ARG 29 -2.046 39.848 18.173 1.00 0.98 ATOM 422 O ARG 29 -3.056 39.325 18.638 1.00 0.98 ATOM 423 N VAL 30 -1.259 40.658 18.894 1.00 1.24 ATOM 425 CA VAL 30 -1.560 41.036 20.299 1.00 1.24 ATOM 427 CB VAL 30 -0.283 41.323 21.119 1.00 1.24 ATOM 429 CG1 VAL 30 0.718 40.172 21.023 1.00 1.24 ATOM 433 CG2 VAL 30 0.428 42.615 20.717 1.00 1.24 ATOM 437 C VAL 30 -2.564 42.185 20.435 1.00 1.24 ATOM 438 O VAL 30 -3.149 42.359 21.513 1.00 1.24 ATOM 439 N THR 31 -2.781 42.955 19.369 1.00 1.43 ATOM 441 CA THR 31 -3.592 44.199 19.376 1.00 1.43 ATOM 443 CB THR 31 -2.735 45.385 18.909 1.00 1.43 ATOM 445 CG2 THR 31 -3.381 46.737 19.199 1.00 1.43 ATOM 449 OG1 THR 31 -1.500 45.406 19.579 1.00 1.43 ATOM 451 C THR 31 -4.814 44.103 18.462 1.00 1.43 ATOM 452 O THR 31 -5.871 44.655 18.778 1.00 1.43 ATOM 453 N GLU 32 -4.665 43.426 17.327 1.00 1.40 ATOM 455 CA GLU 32 -5.572 43.541 16.191 1.00 1.40 ATOM 457 CB GLU 32 -4.847 44.353 15.096 1.00 1.40 ATOM 460 CG GLU 32 -5.723 44.752 13.910 1.00 1.40 ATOM 463 CD GLU 32 -6.877 45.672 14.341 1.00 1.40 ATOM 464 OE1 GLU 32 -6.643 46.889 14.527 1.00 1.40 ATOM 465 OE2 GLU 32 -8.019 45.190 14.496 1.00 1.40 ATOM 466 C GLU 32 -6.084 42.166 15.731 1.00 1.40 ATOM 467 O GLU 32 -7.160 41.743 16.136 1.00 1.40 ATOM 468 N ARG 33 -5.298 41.462 14.909 1.00 1.02 ATOM 470 CA ARG 33 -5.726 40.253 14.185 1.00 1.02 ATOM 472 CB ARG 33 -6.384 40.722 12.871 1.00 1.02 ATOM 475 CG ARG 33 -7.437 39.768 12.300 1.00 1.02 ATOM 478 CD ARG 33 -7.930 40.279 10.942 1.00 1.02 ATOM 481 NE ARG 33 -9.411 40.261 10.856 1.00 1.02 ATOM 483 CZ ARG 33 -10.245 41.242 11.137 1.00 1.02 ATOM 484 NH1 ARG 33 -11.527 41.068 10.977 1.00 1.02 ATOM 487 NH2 ARG 33 -9.855 42.409 11.574 1.00 1.02 ATOM 490 C ARG 33 -4.490 39.379 13.884 1.00 1.02 ATOM 491 O ARG 33 -3.444 39.950 13.616 1.00 1.02 ATOM 492 N PRO 34 -4.570 38.034 13.895 1.00 0.68 ATOM 493 CD PRO 34 -5.637 37.210 14.447 1.00 0.68 ATOM 496 CG PRO 34 -4.949 35.932 14.930 1.00 0.68 ATOM 499 CB PRO 34 -3.826 35.760 13.908 1.00 0.68 ATOM 502 CA PRO 34 -3.417 37.190 13.549 1.00 0.68 ATOM 504 C PRO 34 -3.024 37.289 12.070 1.00 0.68 ATOM 505 O PRO 34 -1.850 37.155 11.739 1.00 0.68 ATOM 506 N PHE 35 -4.001 37.501 11.186 1.00 0.72 ATOM 508 CA PHE 35 -3.787 37.582 9.741 1.00 0.72 ATOM 510 CB PHE 35 -4.912 36.819 9.005 1.00 0.72 ATOM 513 CG PHE 35 -5.401 35.572 9.711 1.00 0.72 ATOM 514 CD1 PHE 35 -4.497 34.550 10.046 1.00 0.72 ATOM 516 CE1 PHE 35 -4.943 33.407 10.742 1.00 0.72 ATOM 518 CZ PHE 35 -6.291 33.297 11.103 1.00 0.72 ATOM 520 CE2 PHE 35 -7.197 34.310 10.767 1.00 0.72 ATOM 522 CD2 PHE 35 -6.752 35.443 10.070 1.00 0.72 ATOM 524 C PHE 35 -3.703 39.043 9.285 1.00 0.72 ATOM 525 O PHE 35 -4.498 39.870 9.731 1.00 0.72 ATOM 526 N TRP 36 -2.748 39.352 8.410 1.00 0.59 ATOM 528 CA TRP 36 -2.479 40.715 7.954 1.00 0.59 ATOM 530 CB TRP 36 -1.335 41.304 8.781 1.00 0.59 ATOM 533 CG TRP 36 -1.053 42.751 8.513 1.00 0.59 ATOM 534 CD1 TRP 36 0.117 43.253 8.040 1.00 0.59 ATOM 536 NE1 TRP 36 0.006 44.624 7.904 1.00 0.59 ATOM 538 CE2 TRP 36 -1.248 45.070 8.247 1.00 0.59 ATOM 539 CZ2 TRP 36 -1.850 46.334 8.244 1.00 0.59 ATOM 541 CH2 TRP 36 -3.185 46.462 8.671 1.00 0.59 ATOM 543 CZ3 TRP 36 -3.897 45.322 9.093 1.00 0.59 ATOM 545 CE3 TRP 36 -3.285 44.056 9.097 1.00 0.59 ATOM 547 CD2 TRP 36 -1.945 43.897 8.658 1.00 0.59 ATOM 548 C TRP 36 -2.204 40.779 6.453 1.00 0.59 ATOM 549 O TRP 36 -1.631 39.864 5.862 1.00 0.59 ATOM 550 N ILE 37 -2.610 41.880 5.823 1.00 0.75 ATOM 552 CA ILE 37 -2.639 42.071 4.364 1.00 0.75 ATOM 554 CB ILE 37 -3.773 43.042 3.966 1.00 0.75 ATOM 556 CG2 ILE 37 -5.139 42.470 4.407 1.00 0.75 ATOM 560 CG1 ILE 37 -3.539 44.453 4.545 1.00 0.75 ATOM 563 CD1 ILE 37 -4.538 45.498 4.032 1.00 0.75 ATOM 567 C ILE 37 -1.293 42.479 3.730 1.00 0.75 ATOM 568 O ILE 37 -1.217 42.672 2.521 1.00 0.75 ATOM 569 N SER 38 -0.239 42.616 4.542 1.00 0.69 ATOM 571 CA SER 38 1.101 43.011 4.087 1.00 0.69 ATOM 573 CB SER 38 1.364 44.476 4.431 1.00 0.69 ATOM 576 OG SER 38 2.519 44.935 3.753 1.00 0.69 ATOM 578 C SER 38 2.182 42.097 4.675 1.00 0.69 ATOM 579 O SER 38 1.993 41.489 5.728 1.00 0.69 ATOM 580 N SER 39 3.315 41.980 3.970 1.00 0.79 ATOM 582 CA SER 39 4.455 41.132 4.347 1.00 0.79 ATOM 584 CB SER 39 5.421 41.034 3.166 1.00 0.79 ATOM 587 OG SER 39 4.721 40.599 2.013 1.00 0.79 ATOM 589 C SER 39 5.159 41.714 5.579 1.00 0.79 ATOM 590 O SER 39 5.950 42.650 5.472 1.00 0.79 ATOM 591 N PHE 40 4.841 41.174 6.755 1.00 0.66 ATOM 593 CA PHE 40 5.123 41.814 8.045 1.00 0.66 ATOM 595 CB PHE 40 3.889 42.663 8.405 1.00 0.66 ATOM 598 CG PHE 40 4.153 43.872 9.276 1.00 0.66 ATOM 599 CD1 PHE 40 3.395 44.083 10.441 1.00 0.66 ATOM 601 CE1 PHE 40 3.595 45.241 11.214 1.00 0.66 ATOM 603 CZ PHE 40 4.544 46.198 10.821 1.00 0.66 ATOM 605 CE2 PHE 40 5.293 45.990 9.645 1.00 0.66 ATOM 607 CD2 PHE 40 5.093 44.832 8.872 1.00 0.66 ATOM 609 C PHE 40 5.458 40.766 9.095 1.00 0.66 ATOM 610 O PHE 40 4.699 39.816 9.293 1.00 0.66 ATOM 611 N ILE 41 6.585 40.919 9.783 1.00 0.69 ATOM 613 CA ILE 41 7.107 39.962 10.764 1.00 0.69 ATOM 615 CB ILE 41 8.140 39.013 10.090 1.00 0.69 ATOM 617 CG2 ILE 41 9.339 39.765 9.484 1.00 0.69 ATOM 621 CG1 ILE 41 8.601 37.905 11.066 1.00 0.69 ATOM 624 CD1 ILE 41 9.428 36.803 10.395 1.00 0.69 ATOM 628 C ILE 41 7.648 40.698 12.002 1.00 0.69 ATOM 629 O ILE 41 8.290 41.747 11.870 1.00 0.69 ATOM 630 N GLY 42 7.372 40.168 13.193 1.00 0.70 ATOM 632 CA GLY 42 7.794 40.783 14.463 1.00 0.70 ATOM 635 C GLY 42 7.420 39.925 15.655 1.00 0.70 ATOM 636 O GLY 42 6.436 39.201 15.627 1.00 0.70 ATOM 637 N ARG 43 8.223 39.979 16.722 1.00 0.77 ATOM 639 CA ARG 43 8.051 39.170 17.955 1.00 0.77 ATOM 641 CB ARG 43 6.888 39.741 18.806 1.00 0.77 ATOM 644 CG ARG 43 7.029 41.236 19.081 1.00 0.77 ATOM 647 CD ARG 43 5.890 41.696 19.988 1.00 0.77 ATOM 650 NE ARG 43 5.820 43.170 20.013 1.00 0.77 ATOM 652 CZ ARG 43 5.637 43.952 21.051 1.00 0.77 ATOM 653 NH1 ARG 43 5.597 45.244 20.846 1.00 0.77 ATOM 656 NH2 ARG 43 5.501 43.516 22.270 1.00 0.77 ATOM 659 C ARG 43 7.926 37.660 17.710 1.00 0.77 ATOM 660 O ARG 43 7.259 36.964 18.475 1.00 0.77 ATOM 661 N SER 44 8.449 37.164 16.588 1.00 0.68 ATOM 663 CA SER 44 8.203 35.813 16.051 1.00 0.68 ATOM 665 CB SER 44 7.317 35.943 14.807 1.00 0.68 ATOM 668 OG SER 44 7.749 37.042 14.047 1.00 0.68 ATOM 670 C SER 44 9.497 35.036 15.792 1.00 0.68 ATOM 671 O SER 44 9.467 34.000 15.132 1.00 0.68 ATOM 672 N LYS 45 10.630 35.517 16.320 1.00 0.69 ATOM 674 CA LYS 45 11.978 34.938 16.147 1.00 0.69 ATOM 676 CB LYS 45 12.645 35.559 14.895 1.00 0.69 ATOM 679 CG LYS 45 12.812 37.080 15.013 1.00 0.69 ATOM 682 CD LYS 45 13.538 37.706 13.817 1.00 0.69 ATOM 685 CE LYS 45 13.702 39.217 14.085 1.00 0.69 ATOM 688 NZ LYS 45 14.465 39.917 13.006 1.00 0.69 ATOM 692 C LYS 45 12.858 35.136 17.401 1.00 0.69 ATOM 693 O LYS 45 12.719 36.119 18.123 1.00 0.69 TER END