####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS472_1-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS472_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 5 - 23 4.86 9.46 LONGEST_CONTINUOUS_SEGMENT: 19 7 - 25 4.92 9.49 LONGEST_CONTINUOUS_SEGMENT: 19 8 - 26 4.72 8.91 LONGEST_CONTINUOUS_SEGMENT: 19 24 - 42 4.74 11.02 LCS_AVERAGE: 41.48 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 1.14 15.61 LCS_AVERAGE: 13.95 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 20 - 28 0.80 15.85 LCS_AVERAGE: 10.64 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 3 13 0 3 3 3 3 5 8 8 10 12 12 14 15 18 21 22 24 25 27 30 LCS_GDT V 3 V 3 3 5 13 1 3 3 4 5 5 6 6 9 10 12 13 15 15 17 22 24 24 27 34 LCS_GDT Q 4 Q 4 3 5 13 1 3 4 4 5 6 10 11 13 15 18 22 24 26 30 33 36 37 38 39 LCS_GDT G 5 G 5 3 5 19 2 3 4 4 5 8 10 12 14 16 19 22 24 27 30 33 36 37 38 39 LCS_GDT P 6 P 6 3 5 19 3 3 4 4 5 6 8 10 12 16 19 22 24 26 30 33 36 37 38 39 LCS_GDT W 7 W 7 3 5 19 3 3 3 4 5 5 8 10 11 14 18 21 24 26 29 30 36 37 38 39 LCS_GDT V 8 V 8 3 4 19 3 3 3 5 6 6 9 13 15 18 20 22 24 27 30 33 36 37 38 39 LCS_GDT G 9 G 9 3 5 19 3 3 4 4 5 7 10 13 15 18 20 22 24 27 30 33 36 37 38 39 LCS_GDT S 10 S 10 4 5 19 4 4 4 5 6 7 10 13 15 18 20 22 24 27 30 33 36 37 38 39 LCS_GDT S 11 S 11 4 5 19 4 4 4 5 6 10 11 13 15 18 20 22 24 27 30 33 36 37 38 39 LCS_GDT Y 12 Y 12 4 5 19 4 4 4 4 4 6 7 10 11 14 16 20 23 26 28 31 34 37 38 39 LCS_GDT V 13 V 13 4 5 19 4 4 4 4 4 6 8 10 15 18 20 22 24 27 30 33 36 37 38 39 LCS_GDT A 14 A 14 3 5 19 3 3 4 6 8 10 11 13 15 18 20 22 24 27 30 33 36 37 38 39 LCS_GDT E 15 E 15 4 5 19 3 4 4 5 8 10 11 13 15 18 20 22 24 27 30 33 36 37 38 39 LCS_GDT T 16 T 16 4 5 19 3 4 4 5 7 10 11 13 15 18 20 22 24 27 30 33 36 37 38 39 LCS_GDT G 17 G 17 4 5 19 3 4 4 5 6 10 11 13 15 18 20 22 24 27 30 33 36 37 38 39 LCS_GDT Q 18 Q 18 4 5 19 3 4 4 5 8 10 11 13 15 18 20 22 24 27 30 33 36 37 38 39 LCS_GDT N 19 N 19 4 5 19 3 3 4 5 5 7 10 11 13 16 19 22 24 27 30 33 36 37 38 39 LCS_GDT W 20 W 20 9 10 19 7 7 9 10 10 10 10 12 15 18 20 22 24 27 30 33 36 37 38 39 LCS_GDT A 21 A 21 9 10 19 7 7 9 10 10 10 11 13 15 18 20 22 24 27 30 33 36 37 38 39 LCS_GDT S 22 S 22 9 10 19 7 7 9 10 10 10 11 13 15 18 20 22 24 27 30 33 36 37 38 39 LCS_GDT L 23 L 23 9 10 19 7 7 9 10 10 10 10 12 15 18 20 22 24 27 30 33 36 37 38 39 LCS_GDT A 24 A 24 9 10 19 7 7 9 10 10 10 10 12 13 17 20 22 24 27 30 33 36 37 38 39 LCS_GDT A 25 A 25 9 10 19 7 7 9 10 10 10 10 11 13 16 20 22 24 27 30 33 36 37 38 39 LCS_GDT N 26 N 26 9 10 19 7 7 9 10 10 10 10 12 13 16 19 22 24 27 30 33 36 37 38 39 LCS_GDT E 27 E 27 9 10 19 3 7 9 10 10 10 10 11 13 14 16 18 19 22 25 29 31 36 38 39 LCS_GDT L 28 L 28 9 10 19 3 6 9 10 10 10 10 11 13 14 16 18 19 20 22 24 29 30 32 34 LCS_GDT R 29 R 29 3 10 19 3 3 4 10 10 10 10 11 13 14 16 18 19 22 25 28 29 31 32 34 LCS_GDT V 30 V 30 3 4 19 3 3 4 6 8 8 10 10 13 15 18 22 24 26 30 32 35 37 38 39 LCS_GDT T 31 T 31 3 4 19 3 3 4 4 5 6 8 12 13 15 19 22 24 27 30 33 36 37 38 39 LCS_GDT E 32 E 32 4 6 19 3 4 4 5 6 7 8 12 13 15 18 22 24 27 30 33 36 37 38 39 LCS_GDT R 33 R 33 4 6 19 3 4 4 6 8 8 10 11 13 14 18 21 24 27 30 33 36 37 38 39 LCS_GDT P 34 P 34 4 6 19 2 4 4 5 6 8 10 11 13 14 16 19 24 26 30 33 36 37 38 39 LCS_GDT F 35 F 35 4 6 19 2 4 4 6 8 8 10 11 13 14 16 18 21 23 27 32 36 37 38 39 LCS_GDT W 36 W 36 4 6 19 3 4 4 6 8 8 10 11 13 14 18 21 24 26 30 33 36 37 38 39 LCS_GDT I 37 I 37 4 6 19 3 4 4 6 8 8 10 11 13 14 18 21 22 26 30 33 36 37 38 39 LCS_GDT S 38 S 38 4 6 19 3 4 4 4 8 8 10 13 15 18 20 22 24 27 30 33 36 37 38 39 LCS_GDT S 39 S 39 3 4 19 0 3 4 6 8 10 11 12 15 18 20 22 24 27 30 33 36 37 38 39 LCS_GDT F 40 F 40 3 4 19 3 3 4 6 8 10 11 13 15 18 20 22 24 27 30 33 36 37 38 39 LCS_GDT I 41 I 41 4 5 19 3 4 4 6 8 10 11 12 15 18 20 22 24 27 30 33 36 37 38 39 LCS_GDT G 42 G 42 4 5 19 3 4 4 5 5 10 11 12 14 16 19 22 24 27 30 33 36 37 38 39 LCS_GDT R 43 R 43 4 5 18 3 4 4 5 5 6 7 10 11 15 18 22 24 26 30 33 36 37 38 39 LCS_GDT S 44 S 44 4 5 12 3 4 4 5 5 6 7 10 12 15 18 22 24 26 29 31 36 37 38 39 LCS_GDT K 45 K 45 3 5 12 1 3 4 5 5 6 7 9 12 15 17 18 21 25 27 30 32 33 36 38 LCS_AVERAGE LCS_A: 22.02 ( 10.64 13.95 41.48 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 7 9 10 10 10 11 13 15 18 20 22 24 27 30 33 36 37 38 39 GDT PERCENT_AT 15.91 15.91 20.45 22.73 22.73 22.73 25.00 29.55 34.09 40.91 45.45 50.00 54.55 61.36 68.18 75.00 81.82 84.09 86.36 88.64 GDT RMS_LOCAL 0.18 0.18 0.80 1.14 1.14 1.14 2.29 3.16 3.32 3.64 4.00 4.37 4.58 5.00 5.36 5.82 6.13 6.21 6.32 6.50 GDT RMS_ALL_AT 16.28 16.28 15.85 15.61 15.61 15.61 9.05 9.70 9.12 9.02 8.88 9.24 8.59 8.23 8.25 7.93 7.92 7.94 7.89 7.85 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 20.566 0 0.203 0.279 20.566 0.000 0.000 - LGA V 3 V 3 18.083 0 0.585 0.571 20.868 0.000 0.000 17.763 LGA Q 4 Q 4 12.587 0 0.142 1.476 14.240 0.000 0.000 11.403 LGA G 5 G 5 8.387 0 0.455 0.455 11.767 0.000 0.000 - LGA P 6 P 6 9.414 0 0.274 0.294 10.492 0.000 0.000 10.114 LGA W 7 W 7 8.211 0 0.525 1.295 15.983 0.000 0.000 15.559 LGA V 8 V 8 3.526 0 0.560 1.006 5.839 28.182 17.662 4.315 LGA G 9 G 9 3.342 0 0.535 0.535 5.377 16.818 16.818 - LGA S 10 S 10 3.757 0 0.434 0.601 6.632 36.364 24.242 6.632 LGA S 11 S 11 3.295 0 0.187 0.198 6.536 14.091 10.303 6.002 LGA Y 12 Y 12 7.603 0 0.096 1.043 19.269 0.000 0.000 19.269 LGA V 13 V 13 5.289 0 0.055 0.063 7.611 9.545 5.455 5.231 LGA A 14 A 14 2.808 0 0.509 0.475 4.175 31.818 26.545 - LGA E 15 E 15 2.758 0 0.600 0.997 7.202 18.636 10.303 7.202 LGA T 16 T 16 3.006 0 0.470 0.941 6.842 40.455 23.896 6.157 LGA G 17 G 17 2.670 0 0.075 0.075 3.997 29.091 29.091 - LGA Q 18 Q 18 2.829 0 0.619 1.448 5.301 17.727 15.758 3.900 LGA N 19 N 19 7.296 0 0.191 1.281 12.167 0.000 0.000 12.167 LGA W 20 W 20 5.303 0 0.578 1.234 11.194 13.636 3.896 8.397 LGA A 21 A 21 2.453 0 0.064 0.069 5.261 35.909 28.727 - LGA S 22 S 22 1.738 0 0.017 0.676 4.400 38.636 28.485 4.400 LGA L 23 L 23 5.989 0 0.102 1.358 12.278 2.727 1.364 12.278 LGA A 24 A 24 6.915 0 0.022 0.025 9.837 0.000 0.000 - LGA A 25 A 25 7.299 0 0.149 0.149 10.024 0.000 0.000 - LGA N 26 N 26 9.289 0 0.156 0.150 13.509 0.000 0.000 5.576 LGA E 27 E 27 14.874 0 0.074 0.275 18.635 0.000 0.000 16.490 LGA L 28 L 28 16.733 0 0.158 0.219 18.752 0.000 0.000 14.766 LGA R 29 R 29 17.580 0 0.040 0.995 21.941 0.000 0.000 19.952 LGA V 30 V 30 11.645 0 0.562 0.552 13.701 0.000 0.000 7.428 LGA T 31 T 31 13.602 0 0.049 1.172 17.457 0.000 0.000 15.695 LGA E 32 E 32 12.459 0 0.565 1.339 14.801 0.000 0.000 14.801 LGA R 33 R 33 11.346 0 0.634 1.257 15.192 0.000 0.000 15.192 LGA P 34 P 34 11.656 0 0.642 0.636 11.874 0.000 0.000 10.184 LGA F 35 F 35 12.474 0 0.623 1.197 20.606 0.000 0.000 20.606 LGA W 36 W 36 8.452 0 0.119 0.746 11.226 0.000 0.000 11.226 LGA I 37 I 37 9.119 0 0.571 1.365 14.663 0.000 0.000 14.663 LGA S 38 S 38 3.771 0 0.664 0.586 5.840 4.091 11.818 2.558 LGA S 39 S 39 5.711 0 0.709 0.873 9.478 2.727 1.818 9.478 LGA F 40 F 40 4.265 0 0.646 0.995 7.099 2.273 7.107 7.099 LGA I 41 I 41 4.426 0 0.047 0.609 5.454 4.091 3.182 4.826 LGA G 42 G 42 6.626 0 0.518 0.518 10.046 0.000 0.000 - LGA R 43 R 43 10.488 0 0.138 1.226 17.982 0.000 0.000 17.982 LGA S 44 S 44 12.184 0 0.480 0.546 13.581 0.000 0.000 12.657 LGA K 45 K 45 16.389 0 0.144 0.981 23.596 0.000 0.000 23.596 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.690 7.599 9.532 7.882 6.056 1.455 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 13 3.16 35.795 29.015 0.399 LGA_LOCAL RMSD: 3.158 Number of atoms: 13 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 9.699 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.690 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.396841 * X + 0.854623 * Y + -0.334870 * Z + 32.706379 Y_new = -0.880243 * X + -0.250927 * Y + 0.402750 * Z + 19.461294 Z_new = 0.260171 * X + 0.454594 * Y + 0.851854 * Z + -48.909237 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.994341 -0.263199 0.490206 [DEG: -114.2673 -15.0802 28.0867 ] ZXZ: -2.447962 0.551282 0.519814 [DEG: -140.2579 31.5861 29.7832 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS472_1-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS472_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 13 3.16 29.015 7.69 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS472_1-D1 PFRMAT TS TARGET T0953s2 MODEL 1 PARENT N/A ATOM 9 N ALA 2 3.915 39.084 -4.681 1.00 1.00 ATOM 10 CA ALA 2 4.155 38.550 -6.006 1.00 1.00 ATOM 11 CB ALA 2 5.670 38.352 -6.225 1.00 1.00 ATOM 12 C ALA 2 3.375 37.245 -6.115 1.00 1.00 ATOM 13 O ALA 2 2.320 37.100 -5.507 1.00 1.00 ATOM 14 N VAL 3 3.887 36.239 -6.858 1.00 1.00 ATOM 15 CA VAL 3 3.306 34.896 -6.910 1.00 1.00 ATOM 16 CB VAL 3 3.981 34.035 -7.976 1.00 1.00 ATOM 17 CG1 VAL 3 3.301 32.652 -8.061 1.00 1.00 ATOM 18 CG2 VAL 3 3.876 34.744 -9.341 1.00 1.00 ATOM 19 C VAL 3 3.395 34.219 -5.545 1.00 1.00 ATOM 20 O VAL 3 2.447 33.636 -5.028 1.00 1.00 ATOM 21 N GLN 4 4.556 34.355 -4.876 1.00 1.00 ATOM 22 CA GLN 4 4.633 34.141 -3.447 1.00 1.00 ATOM 23 CB GLN 4 6.083 33.788 -3.013 1.00 1.00 ATOM 24 CG GLN 4 6.265 33.365 -1.527 1.00 1.00 ATOM 25 CD GLN 4 6.184 34.515 -0.518 1.00 1.00 ATOM 26 OE1 GLN 4 5.258 34.605 0.287 1.00 1.00 ATOM 27 NE2 GLN 4 7.171 35.435 -0.555 1.00 1.00 ATOM 28 C GLN 4 4.148 35.401 -2.740 1.00 1.00 ATOM 29 O GLN 4 4.760 36.466 -2.837 1.00 1.00 ATOM 30 N GLY 5 3.027 35.316 -2.010 1.00 1.00 ATOM 31 CA GLY 5 2.637 36.393 -1.112 1.00 1.00 ATOM 32 C GLY 5 1.268 36.235 -0.513 1.00 1.00 ATOM 33 O GLY 5 0.410 37.066 -0.806 1.00 1.00 ATOM 34 N PRO 6 0.983 35.260 0.348 1.00 1.00 ATOM 35 CD PRO 6 1.981 34.333 0.906 1.00 1.00 ATOM 36 CA PRO 6 -0.321 35.115 1.001 1.00 1.00 ATOM 37 CB PRO 6 -0.238 33.663 1.504 1.00 1.00 ATOM 38 CG PRO 6 1.220 33.512 1.948 1.00 1.00 ATOM 39 C PRO 6 -0.489 36.086 2.169 1.00 1.00 ATOM 40 O PRO 6 -1.049 35.710 3.197 1.00 1.00 ATOM 41 N TRP 7 0.011 37.330 2.045 1.00 1.00 ATOM 42 CA TRP 7 0.184 38.306 3.109 1.00 1.00 ATOM 43 CB TRP 7 -1.171 38.759 3.742 1.00 1.00 ATOM 44 CG TRP 7 -1.072 40.085 4.475 1.00 1.00 ATOM 45 CD1 TRP 7 -1.280 41.355 4.008 1.00 1.00 ATOM 46 NE1 TRP 7 -0.792 42.272 4.910 1.00 1.00 ATOM 47 CE2 TRP 7 -0.253 41.599 5.974 1.00 1.00 ATOM 48 CD2 TRP 7 -0.489 40.226 5.778 1.00 1.00 ATOM 49 CE3 TRP 7 -0.119 39.290 6.735 1.00 1.00 ATOM 50 CZ3 TRP 7 0.541 39.751 7.877 1.00 1.00 ATOM 51 CZ2 TRP 7 0.417 42.055 7.100 1.00 1.00 ATOM 52 CH2 TRP 7 0.809 41.112 8.057 1.00 1.00 ATOM 53 C TRP 7 1.254 37.910 4.136 1.00 1.00 ATOM 54 O TRP 7 2.265 38.593 4.307 1.00 1.00 ATOM 55 N VAL 8 1.053 36.779 4.832 1.00 1.00 ATOM 56 CA VAL 8 1.914 36.262 5.879 1.00 1.00 ATOM 57 CB VAL 8 1.081 35.636 7.001 1.00 1.00 ATOM 58 CG1 VAL 8 0.005 34.683 6.444 1.00 1.00 ATOM 59 CG2 VAL 8 1.960 34.958 8.068 1.00 1.00 ATOM 60 C VAL 8 2.986 35.329 5.313 1.00 1.00 ATOM 61 O VAL 8 2.807 34.129 5.092 1.00 1.00 ATOM 62 N GLY 9 4.187 35.876 5.036 1.00 1.00 ATOM 63 CA GLY 9 5.285 35.113 4.454 1.00 1.00 ATOM 64 C GLY 9 6.198 34.488 5.472 1.00 1.00 ATOM 65 O GLY 9 7.372 34.844 5.582 1.00 1.00 ATOM 66 N SER 10 5.711 33.496 6.236 1.00 1.00 ATOM 67 CA SER 10 6.510 32.757 7.215 1.00 1.00 ATOM 68 CB SER 10 5.658 32.049 8.295 1.00 1.00 ATOM 69 OG SER 10 4.933 33.034 9.028 1.00 1.00 ATOM 70 C SER 10 7.441 31.741 6.576 1.00 1.00 ATOM 71 O SER 10 7.318 30.530 6.732 1.00 1.00 ATOM 72 N SER 11 8.454 32.236 5.843 1.00 1.00 ATOM 73 CA SER 11 9.429 31.466 5.079 1.00 1.00 ATOM 74 CB SER 11 10.282 32.396 4.178 1.00 1.00 ATOM 75 OG SER 11 11.027 31.665 3.202 1.00 1.00 ATOM 76 C SER 11 10.399 30.639 5.914 1.00 1.00 ATOM 77 O SER 11 11.150 29.831 5.376 1.00 1.00 ATOM 78 N TYR 12 10.425 30.822 7.247 1.00 1.00 ATOM 79 CA TYR 12 11.161 29.965 8.160 1.00 1.00 ATOM 80 CB TYR 12 11.504 30.752 9.456 1.00 1.00 ATOM 81 CG TYR 12 12.832 30.328 10.025 1.00 1.00 ATOM 82 CD1 TYR 12 14.006 30.592 9.304 1.00 1.00 ATOM 83 CE1 TYR 12 15.256 30.218 9.810 1.00 1.00 ATOM 84 CZ TYR 12 15.350 29.566 11.040 1.00 1.00 ATOM 85 OH TYR 12 16.614 29.166 11.522 1.00 1.00 ATOM 86 CD2 TYR 12 12.933 29.683 11.270 1.00 1.00 ATOM 87 CE2 TYR 12 14.187 29.302 11.777 1.00 1.00 ATOM 88 C TYR 12 10.388 28.687 8.496 1.00 1.00 ATOM 89 O TYR 12 10.950 27.738 9.041 1.00 1.00 ATOM 90 N VAL 13 9.081 28.641 8.147 1.00 1.00 ATOM 91 CA VAL 13 8.200 27.476 8.196 1.00 1.00 ATOM 92 CB VAL 13 8.701 26.288 7.367 1.00 1.00 ATOM 93 CG1 VAL 13 7.654 25.154 7.346 1.00 1.00 ATOM 94 CG2 VAL 13 8.977 26.759 5.923 1.00 1.00 ATOM 95 C VAL 13 7.767 27.053 9.595 1.00 1.00 ATOM 96 O VAL 13 6.578 26.971 9.897 1.00 1.00 ATOM 97 N ALA 14 8.721 26.760 10.493 1.00 1.00 ATOM 98 CA ALA 14 8.458 26.203 11.804 1.00 1.00 ATOM 99 CB ALA 14 9.736 25.498 12.305 1.00 1.00 ATOM 100 C ALA 14 7.961 27.212 12.844 1.00 1.00 ATOM 101 O ALA 14 8.667 27.572 13.785 1.00 1.00 ATOM 102 N GLU 15 6.701 27.663 12.707 1.00 1.00 ATOM 103 CA GLU 15 5.996 28.428 13.717 1.00 1.00 ATOM 104 CB GLU 15 5.522 29.805 13.182 1.00 1.00 ATOM 105 CG GLU 15 4.568 29.727 11.962 1.00 1.00 ATOM 106 CD GLU 15 3.641 30.927 11.908 1.00 1.00 ATOM 107 OE1 GLU 15 2.667 30.951 12.706 1.00 1.00 ATOM 108 OE2 GLU 15 3.859 31.832 11.069 1.00 1.00 ATOM 109 C GLU 15 4.782 27.667 14.237 1.00 1.00 ATOM 110 O GLU 15 4.348 26.651 13.692 1.00 1.00 ATOM 111 N THR 16 4.166 28.161 15.325 1.00 1.00 ATOM 112 CA THR 16 2.936 27.599 15.879 1.00 1.00 ATOM 113 CB THR 16 2.719 27.962 17.350 1.00 1.00 ATOM 114 OG1 THR 16 3.886 27.668 18.099 1.00 1.00 ATOM 115 CG2 THR 16 1.593 27.122 17.975 1.00 1.00 ATOM 116 C THR 16 1.733 28.086 15.088 1.00 1.00 ATOM 117 O THR 16 1.011 28.970 15.539 1.00 1.00 ATOM 118 N GLY 17 1.493 27.510 13.883 1.00 1.00 ATOM 119 CA GLY 17 0.611 27.990 12.800 1.00 1.00 ATOM 120 C GLY 17 -0.840 28.376 13.045 1.00 1.00 ATOM 121 O GLY 17 -1.544 28.810 12.136 1.00 1.00 ATOM 122 N GLN 18 -1.323 28.299 14.294 1.00 1.00 ATOM 123 CA GLN 18 -2.497 29.005 14.781 1.00 1.00 ATOM 124 CB GLN 18 -2.790 28.505 16.218 1.00 1.00 ATOM 125 CG GLN 18 -4.112 28.983 16.875 1.00 1.00 ATOM 126 CD GLN 18 -4.272 28.295 18.235 1.00 1.00 ATOM 127 OE1 GLN 18 -3.374 27.576 18.681 1.00 1.00 ATOM 128 NE2 GLN 18 -5.415 28.485 18.922 1.00 1.00 ATOM 129 C GLN 18 -2.236 30.514 14.750 1.00 1.00 ATOM 130 O GLN 18 -3.106 31.314 14.411 1.00 1.00 ATOM 131 N ASN 19 -0.967 30.901 15.010 1.00 1.00 ATOM 132 CA ASN 19 -0.368 32.202 14.766 1.00 1.00 ATOM 133 CB ASN 19 1.107 32.145 15.263 1.00 1.00 ATOM 134 CG ASN 19 1.892 33.432 15.045 1.00 1.00 ATOM 135 OD1 ASN 19 1.832 34.364 15.847 1.00 1.00 ATOM 136 ND2 ASN 19 2.664 33.483 13.939 1.00 1.00 ATOM 137 C ASN 19 -0.532 32.629 13.301 1.00 1.00 ATOM 138 O ASN 19 -1.280 33.567 13.044 1.00 1.00 ATOM 139 N TRP 20 0.094 31.940 12.315 1.00 1.00 ATOM 140 CA TRP 20 -0.109 32.102 10.871 1.00 1.00 ATOM 141 CB TRP 20 0.448 30.863 10.104 1.00 1.00 ATOM 142 CG TRP 20 0.670 31.058 8.611 1.00 1.00 ATOM 143 CD1 TRP 20 1.771 31.579 7.998 1.00 1.00 ATOM 144 NE1 TRP 20 1.565 31.685 6.637 1.00 1.00 ATOM 145 CE2 TRP 20 0.310 31.197 6.352 1.00 1.00 ATOM 146 CD2 TRP 20 -0.282 30.781 7.565 1.00 1.00 ATOM 147 CE3 TRP 20 -1.565 30.237 7.589 1.00 1.00 ATOM 148 CZ3 TRP 20 -2.260 30.135 6.375 1.00 1.00 ATOM 149 CZ2 TRP 20 -0.380 31.099 5.151 1.00 1.00 ATOM 150 CH2 TRP 20 -1.678 30.564 5.172 1.00 1.00 ATOM 151 C TRP 20 -1.555 32.335 10.426 1.00 1.00 ATOM 152 O TRP 20 -1.885 33.324 9.771 1.00 1.00 ATOM 153 N ALA 21 -2.474 31.427 10.812 1.00 1.00 ATOM 154 CA ALA 21 -3.886 31.515 10.492 1.00 1.00 ATOM 155 CB ALA 21 -4.581 30.230 10.988 1.00 1.00 ATOM 156 C ALA 21 -4.572 32.747 11.082 1.00 1.00 ATOM 157 O ALA 21 -5.323 33.457 10.413 1.00 1.00 ATOM 158 N SER 22 -4.295 33.053 12.362 1.00 1.00 ATOM 159 CA SER 22 -4.802 34.234 13.048 1.00 1.00 ATOM 160 CB SER 22 -4.508 34.166 14.566 1.00 1.00 ATOM 161 OG SER 22 -5.342 35.058 15.306 1.00 1.00 ATOM 162 C SER 22 -4.241 35.532 12.481 1.00 1.00 ATOM 163 O SER 22 -4.950 36.525 12.339 1.00 1.00 ATOM 164 N LEU 23 -2.950 35.537 12.102 1.00 1.00 ATOM 165 CA LEU 23 -2.258 36.615 11.419 1.00 1.00 ATOM 166 CB LEU 23 -0.756 36.260 11.330 1.00 1.00 ATOM 167 CG LEU 23 0.184 37.327 10.735 1.00 1.00 ATOM 168 CD1 LEU 23 -0.071 38.758 11.237 1.00 1.00 ATOM 169 CD2 LEU 23 1.640 36.939 11.023 1.00 1.00 ATOM 170 C LEU 23 -2.843 36.905 10.042 1.00 1.00 ATOM 171 O LEU 23 -3.223 38.034 9.742 1.00 1.00 ATOM 172 N ALA 24 -3.015 35.877 9.187 1.00 1.00 ATOM 173 CA ALA 24 -3.705 35.978 7.910 1.00 1.00 ATOM 174 CB ALA 24 -3.740 34.584 7.253 1.00 1.00 ATOM 175 C ALA 24 -5.134 36.522 8.022 1.00 1.00 ATOM 176 O ALA 24 -5.597 37.330 7.219 1.00 1.00 ATOM 177 N ALA 25 -5.867 36.115 9.075 1.00 1.00 ATOM 178 CA ALA 25 -7.195 36.600 9.375 1.00 1.00 ATOM 179 CB ALA 25 -7.803 35.708 10.472 1.00 1.00 ATOM 180 C ALA 25 -7.281 38.078 9.790 1.00 1.00 ATOM 181 O ALA 25 -8.352 38.684 9.721 1.00 1.00 ATOM 182 N ASN 26 -6.164 38.715 10.204 1.00 1.00 ATOM 183 CA ASN 26 -6.112 40.129 10.556 1.00 1.00 ATOM 184 CB ASN 26 -4.690 40.568 11.016 1.00 1.00 ATOM 185 CG ASN 26 -4.273 40.017 12.370 1.00 1.00 ATOM 186 OD1 ASN 26 -5.065 39.532 13.178 1.00 1.00 ATOM 187 ND2 ASN 26 -2.959 40.139 12.656 1.00 1.00 ATOM 188 C ASN 26 -6.466 41.059 9.393 1.00 1.00 ATOM 189 O ASN 26 -7.529 41.680 9.360 1.00 1.00 ATOM 190 N GLU 27 -5.537 41.183 8.429 1.00 1.00 ATOM 191 CA GLU 27 -5.267 42.410 7.705 1.00 1.00 ATOM 192 CB GLU 27 -3.825 42.356 7.177 1.00 1.00 ATOM 193 CG GLU 27 -2.810 42.486 8.331 1.00 1.00 ATOM 194 CD GLU 27 -2.789 43.890 8.903 1.00 1.00 ATOM 195 OE1 GLU 27 -2.449 44.830 8.142 1.00 1.00 ATOM 196 OE2 GLU 27 -3.083 44.040 10.116 1.00 1.00 ATOM 197 C GLU 27 -6.199 42.791 6.580 1.00 1.00 ATOM 198 O GLU 27 -6.207 43.936 6.128 1.00 1.00 ATOM 199 N LEU 28 -7.048 41.862 6.114 1.00 1.00 ATOM 200 CA LEU 28 -7.903 42.050 4.952 1.00 1.00 ATOM 201 CB LEU 28 -8.665 40.741 4.631 1.00 1.00 ATOM 202 CG LEU 28 -7.814 39.450 4.639 1.00 1.00 ATOM 203 CD1 LEU 28 -8.687 38.249 4.252 1.00 1.00 ATOM 204 CD2 LEU 28 -6.602 39.521 3.699 1.00 1.00 ATOM 205 C LEU 28 -8.892 43.220 5.054 1.00 1.00 ATOM 206 O LEU 28 -9.334 43.773 4.050 1.00 1.00 ATOM 207 N ARG 29 -9.229 43.646 6.288 1.00 1.00 ATOM 208 CA ARG 29 -10.014 44.844 6.542 1.00 1.00 ATOM 209 CB ARG 29 -11.329 44.491 7.282 1.00 1.00 ATOM 210 CG ARG 29 -12.218 43.422 6.617 1.00 1.00 ATOM 211 CD ARG 29 -12.769 42.357 7.586 1.00 1.00 ATOM 212 NE ARG 29 -11.918 41.118 7.504 1.00 1.00 ATOM 213 CZ ARG 29 -10.759 40.904 8.134 1.00 1.00 ATOM 214 NH1 ARG 29 -10.231 41.770 8.982 1.00 1.00 ATOM 215 NH2 ARG 29 -10.118 39.764 7.924 1.00 1.00 ATOM 216 C ARG 29 -9.256 45.861 7.406 1.00 1.00 ATOM 217 O ARG 29 -9.867 46.689 8.078 1.00 1.00 ATOM 218 N VAL 30 -7.909 45.805 7.453 1.00 1.00 ATOM 219 CA VAL 30 -7.090 46.661 8.320 1.00 1.00 ATOM 220 CB VAL 30 -6.077 45.880 9.147 1.00 1.00 ATOM 221 CG1 VAL 30 -5.265 46.818 10.063 1.00 1.00 ATOM 222 CG2 VAL 30 -6.830 44.871 10.021 1.00 1.00 ATOM 223 C VAL 30 -6.342 47.683 7.500 1.00 1.00 ATOM 224 O VAL 30 -6.598 48.879 7.597 1.00 1.00 ATOM 225 N THR 31 -5.411 47.225 6.632 1.00 1.00 ATOM 226 CA THR 31 -4.439 48.029 5.879 1.00 1.00 ATOM 227 CB THR 31 -3.599 47.152 4.950 1.00 1.00 ATOM 228 OG1 THR 31 -2.463 47.821 4.419 1.00 1.00 ATOM 229 CG2 THR 31 -4.409 46.586 3.774 1.00 1.00 ATOM 230 C THR 31 -4.989 49.233 5.112 1.00 1.00 ATOM 231 O THR 31 -4.269 50.185 4.817 1.00 1.00 ATOM 232 N GLU 32 -6.304 49.244 4.818 1.00 1.00 ATOM 233 CA GLU 32 -7.113 50.379 4.403 1.00 1.00 ATOM 234 CB GLU 32 -8.608 50.059 4.667 1.00 1.00 ATOM 235 CG GLU 32 -9.162 48.779 4.005 1.00 1.00 ATOM 236 CD GLU 32 -10.553 48.444 4.521 1.00 1.00 ATOM 237 OE1 GLU 32 -11.274 49.342 5.028 1.00 1.00 ATOM 238 OE2 GLU 32 -10.925 47.248 4.427 1.00 1.00 ATOM 239 C GLU 32 -6.826 51.677 5.166 1.00 1.00 ATOM 240 O GLU 32 -6.446 52.694 4.585 1.00 1.00 ATOM 241 N ARG 33 -7.002 51.634 6.501 1.00 1.00 ATOM 242 CA ARG 33 -7.091 52.774 7.396 1.00 1.00 ATOM 243 CB ARG 33 -7.895 52.433 8.686 1.00 1.00 ATOM 244 CG ARG 33 -9.330 51.918 8.410 1.00 1.00 ATOM 245 CD ARG 33 -9.456 50.389 8.404 1.00 1.00 ATOM 246 NE ARG 33 -10.691 50.003 7.643 1.00 1.00 ATOM 247 CZ ARG 33 -11.783 49.453 8.174 1.00 1.00 ATOM 248 NH1 ARG 33 -12.039 49.511 9.468 1.00 1.00 ATOM 249 NH2 ARG 33 -12.644 48.869 7.350 1.00 1.00 ATOM 250 C ARG 33 -5.762 53.459 7.725 1.00 1.00 ATOM 251 O ARG 33 -5.738 54.686 7.642 1.00 1.00 ATOM 252 N PRO 34 -4.622 52.839 8.053 1.00 1.00 ATOM 253 CD PRO 34 -4.503 51.436 8.475 1.00 1.00 ATOM 254 CA PRO 34 -3.349 53.555 8.185 1.00 1.00 ATOM 255 CB PRO 34 -2.461 52.552 8.949 1.00 1.00 ATOM 256 CG PRO 34 -3.000 51.181 8.546 1.00 1.00 ATOM 257 C PRO 34 -2.738 53.926 6.839 1.00 1.00 ATOM 258 O PRO 34 -1.565 54.285 6.794 1.00 1.00 ATOM 259 N PHE 35 -3.494 53.854 5.724 1.00 1.00 ATOM 260 CA PHE 35 -3.068 54.215 4.381 1.00 1.00 ATOM 261 CB PHE 35 -2.772 55.731 4.218 1.00 1.00 ATOM 262 CG PHE 35 -4.065 56.493 4.267 1.00 1.00 ATOM 263 CD1 PHE 35 -4.576 56.975 5.482 1.00 1.00 ATOM 264 CE1 PHE 35 -5.815 57.627 5.525 1.00 1.00 ATOM 265 CZ PHE 35 -6.548 57.814 4.346 1.00 1.00 ATOM 266 CD2 PHE 35 -4.809 56.684 3.092 1.00 1.00 ATOM 267 CE2 PHE 35 -6.043 57.345 3.126 1.00 1.00 ATOM 268 C PHE 35 -1.958 53.346 3.800 1.00 1.00 ATOM 269 O PHE 35 -1.287 53.704 2.834 1.00 1.00 ATOM 270 N TRP 36 -1.772 52.132 4.343 1.00 1.00 ATOM 271 CA TRP 36 -0.695 51.246 3.962 1.00 1.00 ATOM 272 CB TRP 36 -0.154 50.502 5.213 1.00 1.00 ATOM 273 CG TRP 36 0.882 51.253 6.028 1.00 1.00 ATOM 274 CD1 TRP 36 1.158 52.591 6.118 1.00 1.00 ATOM 275 NE1 TRP 36 2.260 52.794 6.923 1.00 1.00 ATOM 276 CE2 TRP 36 2.692 51.574 7.390 1.00 1.00 ATOM 277 CD2 TRP 36 1.848 50.582 6.854 1.00 1.00 ATOM 278 CE3 TRP 36 2.033 49.235 7.159 1.00 1.00 ATOM 279 CZ3 TRP 36 3.078 48.893 8.027 1.00 1.00 ATOM 280 CZ2 TRP 36 3.734 51.235 8.238 1.00 1.00 ATOM 281 CH2 TRP 36 3.916 49.880 8.562 1.00 1.00 ATOM 282 C TRP 36 -1.065 50.205 2.911 1.00 1.00 ATOM 283 O TRP 36 -2.228 49.927 2.617 1.00 1.00 ATOM 284 N ILE 37 -0.041 49.562 2.329 1.00 1.00 ATOM 285 CA ILE 37 -0.099 48.174 1.900 1.00 1.00 ATOM 286 CB ILE 37 0.331 47.954 0.449 1.00 1.00 ATOM 287 CG2 ILE 37 0.304 46.440 0.119 1.00 1.00 ATOM 288 CG1 ILE 37 -0.597 48.746 -0.501 1.00 1.00 ATOM 289 CD1 ILE 37 -0.150 48.723 -1.969 1.00 1.00 ATOM 290 C ILE 37 0.811 47.411 2.851 1.00 1.00 ATOM 291 O ILE 37 2.030 47.384 2.687 1.00 1.00 ATOM 292 N SER 38 0.242 46.800 3.906 1.00 1.00 ATOM 293 CA SER 38 0.986 46.017 4.883 1.00 1.00 ATOM 294 CB SER 38 0.158 45.794 6.186 1.00 1.00 ATOM 295 OG SER 38 -1.023 45.024 5.944 1.00 1.00 ATOM 296 C SER 38 1.443 44.677 4.317 1.00 1.00 ATOM 297 O SER 38 0.965 44.224 3.276 1.00 1.00 ATOM 298 N SER 39 2.419 44.015 4.973 1.00 1.00 ATOM 299 CA SER 39 2.850 42.660 4.634 1.00 1.00 ATOM 300 CB SER 39 3.657 42.549 3.320 1.00 1.00 ATOM 301 OG SER 39 2.805 42.661 2.188 1.00 1.00 ATOM 302 C SER 39 3.772 42.166 5.723 1.00 1.00 ATOM 303 O SER 39 4.412 42.970 6.396 1.00 1.00 ATOM 304 N PHE 40 3.885 40.838 5.912 1.00 1.00 ATOM 305 CA PHE 40 4.762 40.244 6.908 1.00 1.00 ATOM 306 CB PHE 40 3.898 39.556 8.006 1.00 1.00 ATOM 307 CG PHE 40 4.672 38.701 8.969 1.00 1.00 ATOM 308 CD1 PHE 40 5.349 39.265 10.058 1.00 1.00 ATOM 309 CE1 PHE 40 6.133 38.461 10.895 1.00 1.00 ATOM 310 CZ PHE 40 6.214 37.080 10.666 1.00 1.00 ATOM 311 CD2 PHE 40 4.773 37.319 8.741 1.00 1.00 ATOM 312 CE2 PHE 40 5.525 36.507 9.594 1.00 1.00 ATOM 313 C PHE 40 5.712 39.249 6.252 1.00 1.00 ATOM 314 O PHE 40 5.338 38.512 5.339 1.00 1.00 ATOM 315 N ILE 41 6.966 39.182 6.742 1.00 1.00 ATOM 316 CA ILE 41 7.896 38.109 6.419 1.00 1.00 ATOM 317 CB ILE 41 9.064 38.559 5.536 1.00 1.00 ATOM 318 CG2 ILE 41 10.124 37.445 5.365 1.00 1.00 ATOM 319 CG1 ILE 41 8.617 39.080 4.150 1.00 1.00 ATOM 320 CD1 ILE 41 8.032 38.013 3.214 1.00 1.00 ATOM 321 C ILE 41 8.448 37.557 7.724 1.00 1.00 ATOM 322 O ILE 41 8.888 38.296 8.602 1.00 1.00 ATOM 323 N GLY 42 8.471 36.221 7.881 1.00 1.00 ATOM 324 CA GLY 42 9.137 35.556 8.999 1.00 1.00 ATOM 325 C GLY 42 10.199 34.655 8.454 1.00 1.00 ATOM 326 O GLY 42 9.908 33.540 8.032 1.00 1.00 ATOM 327 N ARG 43 11.461 35.113 8.401 1.00 1.00 ATOM 328 CA ARG 43 12.516 34.401 7.698 1.00 1.00 ATOM 329 CB ARG 43 12.902 35.139 6.384 1.00 1.00 ATOM 330 CG ARG 43 13.559 36.522 6.585 1.00 1.00 ATOM 331 CD ARG 43 14.049 37.159 5.282 1.00 1.00 ATOM 332 NE ARG 43 14.527 38.532 5.609 1.00 1.00 ATOM 333 CZ ARG 43 14.572 39.476 4.666 1.00 1.00 ATOM 334 NH1 ARG 43 14.418 39.198 3.380 1.00 1.00 ATOM 335 NH2 ARG 43 14.798 40.745 4.961 1.00 1.00 ATOM 336 C ARG 43 13.752 34.168 8.552 1.00 1.00 ATOM 337 O ARG 43 13.753 34.324 9.768 1.00 1.00 ATOM 338 N SER 44 14.854 33.761 7.897 1.00 1.00 ATOM 339 CA SER 44 16.172 33.552 8.473 1.00 1.00 ATOM 340 CB SER 44 17.102 32.904 7.414 1.00 1.00 ATOM 341 OG SER 44 16.578 31.651 6.983 1.00 1.00 ATOM 342 C SER 44 16.825 34.841 8.939 1.00 1.00 ATOM 343 O SER 44 16.802 35.183 10.119 1.00 1.00 ATOM 344 N LYS 45 17.423 35.562 7.980 1.00 1.00 ATOM 345 CA LYS 45 17.835 36.939 8.012 1.00 1.00 ATOM 346 CB LYS 45 18.963 37.301 9.016 1.00 1.00 ATOM 347 CG LYS 45 20.206 36.402 9.008 1.00 1.00 ATOM 348 CD LYS 45 21.434 37.158 9.549 1.00 1.00 ATOM 349 CE LYS 45 22.570 36.275 10.078 1.00 1.00 ATOM 350 NZ LYS 45 23.221 35.537 8.986 1.00 1.00 ATOM 351 C LYS 45 18.261 37.206 6.593 1.00 1.00 ATOM 352 O LYS 45 18.201 36.299 5.760 1.00 1.00 TER END