####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 334), selected 41 , name T0955TS055_1 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS055_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 1.70 1.70 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 1.70 1.70 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 2 - 21 0.95 2.07 LCS_AVERAGE: 38.43 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 15 41 41 3 3 3 5 23 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 20 41 41 6 16 27 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 20 41 41 11 18 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 20 41 41 11 20 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 20 41 41 11 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 20 41 41 11 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 20 41 41 11 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 20 41 41 11 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 20 41 41 11 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 20 41 41 11 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 20 41 41 11 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 20 41 41 11 20 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 20 41 41 9 20 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 20 41 41 11 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 20 41 41 7 20 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 20 41 41 3 14 25 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 20 41 41 9 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 20 41 41 6 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 20 41 41 8 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 20 41 41 7 16 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 20 41 41 7 16 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 7 41 41 3 16 24 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 7 41 41 4 16 28 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 5 41 41 6 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 5 41 41 9 20 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 5 41 41 4 11 17 32 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 14 41 41 7 15 19 28 35 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 14 41 41 8 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 14 41 41 7 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 14 41 41 7 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 14 41 41 9 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 14 41 41 9 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 14 41 41 6 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 14 41 41 3 15 19 28 35 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 14 41 41 3 3 18 21 31 37 39 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 14 41 41 5 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 14 41 41 5 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 14 41 41 7 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 14 41 41 7 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 14 41 41 7 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 6 41 41 0 20 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 79.48 ( 38.43 100.00 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 GDT PERCENT_AT 26.83 51.22 73.17 82.93 90.24 92.68 97.56 97.56 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.29 0.75 0.90 1.06 1.26 1.36 1.55 1.55 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 GDT RMS_ALL_AT 2.60 1.75 1.76 1.75 1.78 1.76 1.71 1.71 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 # Checking swapping # possible swapping detected: E 3 E 3 # possible swapping detected: D 23 D 23 # possible swapping detected: E 30 E 30 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 3.153 0 0.589 0.901 6.023 19.545 14.848 6.023 LGA Q 2 Q 2 2.354 0 0.248 0.876 4.684 44.545 26.869 4.684 LGA E 3 E 3 1.431 0 0.040 1.736 7.617 65.909 35.556 6.602 LGA T 4 T 4 1.152 0 0.062 1.258 3.709 69.545 56.104 3.709 LGA R 5 R 5 0.689 0 0.040 1.107 2.786 81.818 65.620 2.786 LGA K 6 K 6 0.691 0 0.057 0.798 2.897 86.364 67.475 1.508 LGA K 7 K 7 0.632 0 0.058 0.783 4.562 81.818 53.737 4.562 LGA C 8 C 8 0.677 0 0.039 0.770 3.323 81.818 71.212 3.323 LGA T 9 T 9 0.592 0 0.030 0.051 0.873 86.364 84.416 0.675 LGA E 10 E 10 0.439 0 0.055 0.679 1.747 100.000 76.162 1.729 LGA M 11 M 11 0.717 0 0.065 0.806 1.949 81.818 70.000 1.949 LGA K 12 K 12 1.156 0 0.123 1.305 6.480 61.818 44.646 6.480 LGA K 13 K 13 1.115 0 0.062 0.536 3.236 73.636 57.576 1.699 LGA K 14 K 14 0.426 0 0.032 0.613 2.132 86.818 81.414 2.132 LGA F 15 F 15 1.085 0 0.213 0.337 2.363 59.091 64.959 1.508 LGA K 16 K 16 2.145 0 0.433 1.162 9.995 58.636 27.879 9.995 LGA N 17 N 17 0.350 0 0.442 0.834 4.957 86.818 54.773 4.194 LGA C 18 C 18 1.113 0 0.059 0.861 4.393 69.545 58.182 4.393 LGA E 19 E 19 0.921 0 0.254 0.396 1.423 73.636 72.727 1.423 LGA V 20 V 20 1.523 0 0.073 0.092 2.028 47.727 49.091 1.862 LGA R 21 R 21 1.726 0 0.122 1.420 7.464 51.364 30.744 4.209 LGA C 22 C 22 2.400 0 0.030 0.050 2.927 44.545 38.788 2.927 LGA D 23 D 23 2.069 0 0.205 1.197 5.416 30.455 21.364 3.991 LGA E 24 E 24 0.454 0 0.142 0.881 5.485 82.273 49.495 4.711 LGA S 25 S 25 1.228 0 0.205 0.728 3.058 59.091 50.909 3.058 LGA N 26 N 26 3.367 0 0.128 1.155 9.896 44.091 22.045 8.331 LGA H 27 H 27 3.455 0 0.194 1.253 11.243 25.909 10.364 10.815 LGA C 28 C 28 0.647 0 0.253 0.763 3.252 73.636 65.758 3.252 LGA V 29 V 29 1.136 0 0.025 0.207 1.349 65.455 65.455 1.200 LGA E 30 E 30 0.980 0 0.022 0.656 2.276 77.727 66.465 1.936 LGA V 31 V 31 0.546 0 0.131 0.158 1.022 86.364 82.078 0.849 LGA R 32 R 32 0.308 0 0.018 1.066 4.165 86.364 69.421 1.540 LGA C 33 C 33 1.167 0 0.508 0.608 2.169 62.727 61.212 1.521 LGA S 34 S 34 3.375 0 0.516 0.491 6.558 11.818 10.606 3.558 LGA D 35 D 35 4.950 0 0.071 0.164 6.970 4.545 2.273 6.970 LGA T 36 T 36 1.472 0 0.178 1.085 2.486 66.818 60.779 2.233 LGA K 37 K 37 0.716 0 0.134 0.720 1.794 81.818 73.131 1.794 LGA Y 38 Y 38 1.137 0 0.032 1.261 6.138 69.545 42.727 6.138 LGA T 39 T 39 1.086 0 0.184 0.252 1.961 61.818 63.636 0.846 LGA L 40 L 40 0.904 0 0.284 1.291 3.400 74.091 55.682 3.400 LGA C 41 C 41 1.031 1 0.390 0.452 6.214 43.636 26.494 6.214 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 334 99.70 41 41 SUMMARY(RMSD_GDC): 1.696 1.765 2.950 63.936 51.285 27.894 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 40 1.55 82.927 91.592 2.430 LGA_LOCAL RMSD: 1.546 Number of atoms: 40 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 1.712 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 1.696 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.527869 * X + 0.446546 * Y + -0.722461 * Z + -11.342617 Y_new = 0.457871 * X + 0.566817 * Y + 0.684889 * Z + -78.269043 Z_new = 0.715338 * X + -0.692326 * Y + 0.094745 * Z + -5.934416 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.714506 -0.797108 -1.434791 [DEG: 40.9382 -45.6709 -82.2075 ] ZXZ: -2.329504 1.475909 2.339848 [DEG: -133.4707 84.5634 134.0634 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS055_1 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS055_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 40 1.55 91.592 1.70 REMARK ---------------------------------------------------------- MOLECULE T0955TS055_1 PFRMAT TS TARGET T0955 MODEL 1 PARENT N/A ATOM 1 N SER 1 -0.891 -13.730 0.118 1.00 1.07 ATOM 2 CA SER 1 -1.966 -12.929 0.709 1.00 1.07 ATOM 4 CB SER 1 -3.161 -13.859 0.954 1.00 1.07 ATOM 7 OG SER 1 -4.260 -13.199 1.540 1.00 1.07 ATOM 9 C SER 1 -1.450 -12.235 1.991 1.00 1.07 ATOM 10 O SER 1 -1.584 -11.022 2.231 1.00 1.07 ATOM 11 N GLN 2 -0.697 -13.003 2.779 1.00 0.58 ATOM 13 CA GLN 2 0.184 -12.463 3.815 1.00 0.58 ATOM 15 CB GLN 2 0.868 -13.618 4.586 1.00 0.58 ATOM 18 CG GLN 2 -0.108 -14.587 5.280 1.00 0.58 ATOM 21 CD GLN 2 0.610 -15.646 6.122 1.00 0.58 ATOM 22 OE1 GLN 2 0.827 -15.484 7.309 1.00 0.58 ATOM 23 NE2 GLN 2 0.985 -16.778 5.565 1.00 0.58 ATOM 26 C GLN 2 1.252 -11.541 3.205 1.00 0.58 ATOM 27 O GLN 2 1.540 -10.479 3.747 1.00 0.58 ATOM 28 N GLU 3 1.808 -11.915 2.047 1.00 0.00 ATOM 30 CA GLU 3 2.867 -11.167 1.361 1.00 0.00 ATOM 32 CB GLU 3 3.524 -12.070 0.297 1.00 0.00 ATOM 35 CG GLU 3 4.751 -12.820 0.829 1.00 0.00 ATOM 38 CD GLU 3 5.801 -11.835 1.355 1.00 0.00 ATOM 39 OE1 GLU 3 6.387 -11.071 0.549 1.00 0.00 ATOM 40 OE2 GLU 3 5.943 -11.706 2.586 1.00 0.00 ATOM 41 C GLU 3 2.394 -9.851 0.715 1.00 0.00 ATOM 42 O GLU 3 3.145 -8.863 0.699 1.00 0.00 ATOM 43 N THR 4 1.168 -9.825 0.187 1.00 0.00 ATOM 45 CA THR 4 0.513 -8.595 -0.278 1.00 0.00 ATOM 47 CB THR 4 -0.791 -8.872 -1.049 1.00 0.00 ATOM 49 CG2 THR 4 -0.503 -9.116 -2.526 1.00 0.00 ATOM 53 OG1 THR 4 -1.386 -10.038 -0.553 1.00 0.00 ATOM 55 C THR 4 0.214 -7.671 0.888 1.00 0.00 ATOM 56 O THR 4 0.653 -6.524 0.837 1.00 0.00 ATOM 57 N ARG 5 -0.404 -8.149 1.986 1.00 0.00 ATOM 59 CA ARG 5 -0.603 -7.281 3.177 1.00 0.00 ATOM 61 CB ARG 5 -1.385 -8.012 4.276 1.00 0.00 ATOM 64 CG ARG 5 -2.860 -8.173 3.904 1.00 0.00 ATOM 67 CD ARG 5 -3.643 -8.837 5.048 1.00 0.00 ATOM 70 NE ARG 5 -4.972 -9.280 4.591 1.00 0.00 ATOM 72 CZ ARG 5 -5.177 -10.322 3.807 1.00 0.00 ATOM 73 NH1 ARG 5 -6.341 -10.562 3.281 1.00 0.00 ATOM 76 NH2 ARG 5 -4.223 -11.131 3.459 1.00 0.00 ATOM 79 C ARG 5 0.694 -6.715 3.774 1.00 0.00 ATOM 80 O ARG 5 0.739 -5.531 4.129 1.00 0.00 ATOM 81 N LYS 6 1.760 -7.525 3.853 1.00 0.00 ATOM 83 CA LYS 6 3.092 -7.075 4.295 1.00 0.00 ATOM 85 CB LYS 6 4.086 -8.249 4.311 1.00 0.00 ATOM 88 CG LYS 6 5.410 -7.855 4.998 1.00 0.00 ATOM 91 CD LYS 6 6.545 -8.827 4.658 1.00 0.00 ATOM 94 CE LYS 6 7.077 -8.556 3.245 1.00 0.00 ATOM 97 NZ LYS 6 7.792 -9.740 2.720 1.00 0.00 ATOM 101 C LYS 6 3.601 -5.943 3.410 1.00 0.00 ATOM 102 O LYS 6 3.907 -4.872 3.940 1.00 0.00 ATOM 103 N LYS 7 3.600 -6.132 2.082 1.00 0.00 ATOM 105 CA LYS 7 4.034 -5.063 1.165 1.00 0.00 ATOM 107 CB LYS 7 4.073 -5.549 -0.290 1.00 0.00 ATOM 110 CG LYS 7 5.258 -6.498 -0.476 1.00 0.00 ATOM 113 CD LYS 7 5.329 -7.061 -1.902 1.00 0.00 ATOM 116 CE LYS 7 6.138 -8.359 -1.885 1.00 0.00 ATOM 119 NZ LYS 7 5.337 -9.446 -1.277 1.00 0.00 ATOM 123 C LYS 7 3.190 -3.784 1.295 1.00 0.00 ATOM 124 O LYS 7 3.757 -2.693 1.330 1.00 0.00 ATOM 125 N CYS 8 1.862 -3.886 1.448 1.00 0.00 ATOM 127 CA CYS 8 1.003 -2.724 1.730 1.00 0.00 ATOM 129 CB CYS 8 -0.470 -3.142 1.918 1.00 0.00 ATOM 132 SG CYS 8 -1.380 -3.898 0.545 1.00 0.00 ATOM 133 C CYS 8 1.438 -1.976 2.994 1.00 0.00 ATOM 134 O CYS 8 1.480 -0.748 3.001 1.00 0.00 ATOM 135 N THR 9 1.789 -2.695 4.064 1.00 0.00 ATOM 137 CA THR 9 2.170 -2.097 5.358 1.00 0.00 ATOM 139 CB THR 9 2.170 -3.173 6.455 1.00 0.00 ATOM 141 CG2 THR 9 2.357 -2.591 7.859 1.00 0.00 ATOM 145 OG1 THR 9 0.936 -3.846 6.472 1.00 0.00 ATOM 147 C THR 9 3.547 -1.421 5.336 1.00 0.00 ATOM 148 O THR 9 3.743 -0.335 5.896 1.00 0.00 ATOM 149 N GLU 10 4.509 -2.046 4.651 1.00 0.00 ATOM 151 CA GLU 10 5.797 -1.440 4.332 1.00 0.00 ATOM 153 CB GLU 10 6.587 -2.349 3.380 1.00 0.00 ATOM 156 CG GLU 10 7.156 -3.682 3.879 1.00 0.00 ATOM 159 CD GLU 10 7.819 -4.394 2.682 1.00 0.00 ATOM 160 OE1 GLU 10 7.486 -5.574 2.420 1.00 0.00 ATOM 161 OE2 GLU 10 8.617 -3.696 2.004 1.00 0.00 ATOM 162 C GLU 10 5.614 -0.113 3.600 1.00 0.00 ATOM 163 O GLU 10 6.155 0.907 4.027 1.00 0.00 ATOM 164 N MET 11 4.859 -0.120 2.495 1.00 0.00 ATOM 166 CA MET 11 4.733 1.057 1.643 1.00 0.00 ATOM 168 CB MET 11 4.183 0.675 0.265 1.00 0.00 ATOM 171 CG MET 11 5.112 -0.307 -0.479 1.00 0.00 ATOM 174 SD MET 11 6.871 0.121 -0.674 1.00 0.00 ATOM 175 CE MET 11 6.774 1.786 -1.378 1.00 0.00 ATOM 179 C MET 11 3.938 2.179 2.325 1.00 0.00 ATOM 180 O MET 11 4.322 3.343 2.213 1.00 0.00 ATOM 181 N LYS 12 2.927 1.844 3.138 1.00 0.00 ATOM 183 CA LYS 12 2.267 2.753 4.094 1.00 0.00 ATOM 185 CB LYS 12 1.249 1.920 4.909 1.00 0.00 ATOM 188 CG LYS 12 0.584 2.552 6.142 1.00 0.00 ATOM 191 CD LYS 12 -0.313 3.771 5.888 1.00 0.00 ATOM 194 CE LYS 12 0.500 5.069 5.892 1.00 0.00 ATOM 197 NZ LYS 12 -0.352 6.265 6.014 1.00 0.00 ATOM 201 C LYS 12 3.280 3.458 4.976 1.00 0.00 ATOM 202 O LYS 12 3.289 4.687 5.013 1.00 0.00 ATOM 203 N LYS 13 4.151 2.710 5.663 1.00 0.43 ATOM 205 CA LYS 13 5.165 3.330 6.531 1.00 0.43 ATOM 207 CB LYS 13 5.918 2.255 7.330 1.00 0.43 ATOM 210 CG LYS 13 4.996 1.644 8.400 1.00 0.43 ATOM 213 CD LYS 13 5.681 0.529 9.193 1.00 0.43 ATOM 216 CE LYS 13 4.676 -0.059 10.187 1.00 0.43 ATOM 219 NZ LYS 13 5.295 -1.075 11.074 1.00 0.43 ATOM 223 C LYS 13 6.108 4.258 5.747 1.00 0.43 ATOM 224 O LYS 13 6.200 5.435 6.074 1.00 0.43 ATOM 225 N LYS 14 6.726 3.759 4.671 1.00 0.69 ATOM 227 CA LYS 14 7.671 4.493 3.803 1.00 0.69 ATOM 229 CB LYS 14 8.133 3.559 2.660 1.00 0.69 ATOM 232 CG LYS 14 8.940 2.312 3.090 1.00 0.69 ATOM 235 CD LYS 14 8.933 1.259 1.962 1.00 0.69 ATOM 238 CE LYS 14 9.498 -0.107 2.373 1.00 0.69 ATOM 241 NZ LYS 14 9.261 -1.142 1.323 1.00 0.69 ATOM 245 C LYS 14 7.100 5.776 3.188 1.00 0.69 ATOM 246 O LYS 14 7.843 6.721 2.947 1.00 0.69 ATOM 247 N PHE 15 5.788 5.825 2.968 1.00 0.77 ATOM 249 CA PHE 15 5.092 6.968 2.386 1.00 0.77 ATOM 251 CB PHE 15 4.430 6.557 1.061 1.00 0.77 ATOM 254 CG PHE 15 5.362 6.114 -0.062 1.00 0.77 ATOM 255 CD1 PHE 15 4.927 5.119 -0.960 1.00 0.77 ATOM 257 CE1 PHE 15 5.709 4.771 -2.075 1.00 0.77 ATOM 259 CZ PHE 15 6.958 5.382 -2.276 1.00 0.77 ATOM 261 CE2 PHE 15 7.414 6.354 -1.371 1.00 0.77 ATOM 263 CD2 PHE 15 6.612 6.731 -0.279 1.00 0.77 ATOM 265 C PHE 15 4.151 7.670 3.364 1.00 0.77 ATOM 266 O PHE 15 3.342 8.489 2.930 1.00 0.77 ATOM 267 N LYS 16 4.387 7.493 4.676 1.00 0.71 ATOM 269 CA LYS 16 4.030 8.447 5.741 1.00 0.71 ATOM 271 CB LYS 16 5.115 9.575 5.811 1.00 0.71 ATOM 274 CG LYS 16 5.777 10.162 4.520 1.00 0.71 ATOM 277 CD LYS 16 4.969 11.110 3.591 1.00 0.71 ATOM 280 CE LYS 16 5.634 11.324 2.216 1.00 0.71 ATOM 283 NZ LYS 16 4.635 11.422 1.114 1.00 0.71 ATOM 287 C LYS 16 2.572 8.929 5.625 1.00 0.71 ATOM 288 O LYS 16 1.628 8.183 5.894 1.00 0.71 ATOM 289 N ASN 17 2.383 10.168 5.196 1.00 0.40 ATOM 291 CA ASN 17 1.108 10.777 4.851 1.00 0.40 ATOM 293 CB ASN 17 1.248 12.308 4.978 1.00 0.40 ATOM 296 CG ASN 17 -0.069 12.912 5.420 1.00 0.40 ATOM 297 OD1 ASN 17 -0.934 13.301 4.517 1.00 0.40 ATOM 298 ND2 ASN 17 -0.353 12.990 6.597 1.00 0.40 ATOM 301 C ASN 17 0.505 10.330 3.499 1.00 0.40 ATOM 302 O ASN 17 0.368 11.099 2.534 1.00 0.40 ATOM 303 N CYS 18 0.124 9.053 3.458 1.00 0.00 ATOM 305 CA CYS 18 -0.616 8.446 2.362 1.00 0.00 ATOM 307 CB CYS 18 0.346 7.576 1.536 1.00 0.00 ATOM 310 SG CYS 18 0.935 6.146 2.492 1.00 0.00 ATOM 312 C CYS 18 -1.847 7.639 2.805 1.00 0.00 ATOM 313 O CYS 18 -1.863 7.000 3.863 1.00 0.00 ATOM 314 N GLU 19 -2.863 7.600 1.953 1.00 0.00 ATOM 316 CA GLU 19 -3.749 6.446 1.809 1.00 0.00 ATOM 318 CB GLU 19 -4.934 6.870 0.908 1.00 0.00 ATOM 321 CG GLU 19 -5.736 5.710 0.287 1.00 0.00 ATOM 324 CD GLU 19 -6.796 6.158 -0.723 1.00 0.00 ATOM 325 OE1 GLU 19 -6.754 5.675 -1.881 1.00 0.00 ATOM 326 OE2 GLU 19 -7.780 6.821 -0.328 1.00 0.00 ATOM 327 C GLU 19 -2.993 5.271 1.187 1.00 0.00 ATOM 328 O GLU 19 -2.170 5.444 0.285 1.00 0.00 ATOM 329 N VAL 20 -3.394 4.064 1.591 1.00 0.00 ATOM 331 CA VAL 20 -3.042 2.802 0.937 1.00 0.00 ATOM 333 CB VAL 20 -1.954 2.067 1.754 1.00 0.00 ATOM 335 CG1 VAL 20 -1.605 0.688 1.182 1.00 0.00 ATOM 339 CG2 VAL 20 -0.656 2.876 1.795 1.00 0.00 ATOM 343 C VAL 20 -4.293 1.944 0.853 1.00 0.00 ATOM 344 O VAL 20 -4.969 1.720 1.862 1.00 0.00 ATOM 345 N ARG 21 -4.587 1.439 -0.340 1.00 0.00 ATOM 347 CA ARG 21 -5.678 0.509 -0.624 1.00 0.00 ATOM 349 CB ARG 21 -6.791 1.176 -1.456 1.00 0.00 ATOM 352 CG ARG 21 -7.473 2.345 -0.732 1.00 0.00 ATOM 355 CD ARG 21 -8.647 2.881 -1.557 1.00 0.00 ATOM 358 NE ARG 21 -9.097 4.185 -1.042 1.00 0.00 ATOM 360 CZ ARG 21 -10.038 4.464 -0.163 1.00 0.00 ATOM 361 NH1 ARG 21 -10.137 5.671 0.301 1.00 0.00 ATOM 364 NH2 ARG 21 -10.875 3.564 0.281 1.00 0.00 ATOM 367 C ARG 21 -5.096 -0.692 -1.359 1.00 0.00 ATOM 368 O ARG 21 -4.854 -0.621 -2.560 1.00 0.00 ATOM 369 N CYS 22 -4.836 -1.786 -0.636 1.00 0.69 ATOM 371 CA CYS 22 -4.653 -3.090 -1.281 1.00 0.69 ATOM 373 CB CYS 22 -4.410 -4.184 -0.224 1.00 0.69 ATOM 376 SG CYS 22 -3.316 -3.827 1.194 1.00 0.69 ATOM 377 C CYS 22 -5.917 -3.421 -2.107 1.00 0.69 ATOM 378 O CYS 22 -6.996 -2.978 -1.698 1.00 0.69 ATOM 379 N ASP 23 -5.855 -4.291 -3.117 1.00 1.24 ATOM 381 CA ASP 23 -6.968 -5.232 -3.233 1.00 1.24 ATOM 383 CB ASP 23 -7.930 -4.958 -4.390 1.00 1.24 ATOM 386 CG ASP 23 -9.036 -6.019 -4.375 1.00 1.24 ATOM 387 OD1 ASP 23 -9.236 -6.678 -5.415 1.00 1.24 ATOM 388 OD2 ASP 23 -9.599 -6.258 -3.285 1.00 1.24 ATOM 389 C ASP 23 -6.477 -6.682 -3.172 1.00 1.24 ATOM 390 O ASP 23 -5.578 -7.140 -3.872 1.00 1.24 ATOM 391 N GLU 24 -7.077 -7.413 -2.243 1.00 1.84 ATOM 393 CA GLU 24 -6.670 -8.764 -1.880 1.00 1.84 ATOM 395 CB GLU 24 -7.074 -9.013 -0.417 1.00 1.84 ATOM 398 CG GLU 24 -5.914 -8.649 0.519 1.00 1.84 ATOM 401 CD GLU 24 -4.834 -9.742 0.555 1.00 1.84 ATOM 402 OE1 GLU 24 -3.629 -9.398 0.545 1.00 1.84 ATOM 403 OE2 GLU 24 -5.198 -10.926 0.760 1.00 1.84 ATOM 404 C GLU 24 -7.212 -9.845 -2.822 1.00 1.84 ATOM 405 O GLU 24 -6.916 -11.022 -2.637 1.00 1.84 ATOM 406 N SER 25 -7.946 -9.478 -3.880 1.00 2.18 ATOM 408 CA SER 25 -8.340 -10.426 -4.929 1.00 2.18 ATOM 410 CB SER 25 -9.365 -9.799 -5.877 1.00 2.18 ATOM 413 OG SER 25 -8.763 -8.817 -6.687 1.00 2.18 ATOM 415 C SER 25 -7.186 -11.028 -5.747 1.00 2.18 ATOM 416 O SER 25 -7.426 -11.924 -6.561 1.00 2.18 ATOM 417 N ASN 26 -5.967 -10.526 -5.514 1.00 2.20 ATOM 419 CA ASN 26 -4.686 -10.622 -6.236 1.00 2.20 ATOM 421 CB ASN 26 -4.539 -11.831 -7.182 1.00 2.20 ATOM 424 CG ASN 26 -4.365 -13.123 -6.403 1.00 2.20 ATOM 425 OD1 ASN 26 -3.269 -13.487 -6.007 1.00 2.20 ATOM 426 ND2 ASN 26 -5.428 -13.831 -6.123 1.00 2.20 ATOM 429 C ASN 26 -4.333 -9.262 -6.895 1.00 2.20 ATOM 430 O ASN 26 -3.353 -9.153 -7.629 1.00 2.20 ATOM 431 N HIS 27 -5.118 -8.214 -6.623 1.00 1.91 ATOM 433 CA HIS 27 -5.087 -6.938 -7.325 1.00 1.91 ATOM 435 CB HIS 27 -6.485 -6.577 -7.839 1.00 1.91 ATOM 438 CG HIS 27 -6.481 -5.343 -8.707 1.00 1.91 ATOM 439 ND1 HIS 27 -5.846 -5.227 -9.946 1.00 1.91 ATOM 440 CE1 HIS 27 -6.049 -3.962 -10.342 1.00 1.91 ATOM 442 NE2 HIS 27 -6.752 -3.284 -9.419 1.00 1.91 ATOM 444 CD2 HIS 27 -7.032 -4.139 -8.378 1.00 1.91 ATOM 446 C HIS 27 -4.408 -5.813 -6.534 1.00 1.91 ATOM 447 O HIS 27 -5.015 -4.868 -6.030 1.00 1.91 ATOM 448 N CYS 28 -3.078 -5.897 -6.569 1.00 1.41 ATOM 450 CA CYS 28 -2.169 -4.774 -6.358 1.00 1.41 ATOM 452 CB CYS 28 -2.191 -3.919 -7.655 1.00 1.41 ATOM 455 SG CYS 28 -3.515 -2.666 -7.685 1.00 1.41 ATOM 457 C CYS 28 -2.381 -3.994 -5.048 1.00 1.41 ATOM 458 O CYS 28 -2.988 -4.434 -4.068 1.00 1.41 ATOM 459 N VAL 29 -1.775 -2.815 -5.035 1.00 0.87 ATOM 461 CA VAL 29 -1.953 -1.781 -4.035 1.00 0.87 ATOM 463 CB VAL 29 -0.796 -1.780 -3.011 1.00 0.87 ATOM 465 CG1 VAL 29 -1.191 -0.986 -1.769 1.00 0.87 ATOM 469 CG2 VAL 29 -0.343 -3.171 -2.555 1.00 0.87 ATOM 473 C VAL 29 -1.978 -0.444 -4.761 1.00 0.87 ATOM 474 O VAL 29 -0.978 -0.043 -5.358 1.00 0.87 ATOM 475 N GLU 30 -3.078 0.292 -4.712 1.00 0.00 ATOM 477 CA GLU 30 -3.014 1.727 -4.946 1.00 0.00 ATOM 479 CB GLU 30 -4.396 2.313 -5.262 1.00 0.00 ATOM 482 CG GLU 30 -4.983 1.841 -6.597 1.00 0.00 ATOM 485 CD GLU 30 -6.040 2.843 -7.064 1.00 0.00 ATOM 486 OE1 GLU 30 -7.050 3.042 -6.352 1.00 0.00 ATOM 487 OE2 GLU 30 -5.788 3.542 -8.073 1.00 0.00 ATOM 488 C GLU 30 -2.474 2.450 -3.712 1.00 0.00 ATOM 489 O GLU 30 -2.791 2.102 -2.577 1.00 0.00 ATOM 490 N VAL 31 -1.700 3.508 -3.930 1.00 0.00 ATOM 492 CA VAL 31 -1.162 4.321 -2.844 1.00 0.00 ATOM 494 CB VAL 31 0.313 3.971 -2.549 1.00 0.00 ATOM 496 CG1 VAL 31 0.867 4.860 -1.432 1.00 0.00 ATOM 500 CG2 VAL 31 0.497 2.499 -2.150 1.00 0.00 ATOM 504 C VAL 31 -1.307 5.795 -3.208 1.00 0.00 ATOM 505 O VAL 31 -0.606 6.304 -4.090 1.00 0.00 ATOM 506 N ARG 32 -2.232 6.488 -2.547 1.00 0.00 ATOM 508 CA ARG 32 -2.502 7.912 -2.782 1.00 0.00 ATOM 510 CB ARG 32 -4.012 8.204 -2.839 1.00 0.00 ATOM 513 CG ARG 32 -4.691 7.658 -4.098 1.00 0.00 ATOM 516 CD ARG 32 -6.193 7.986 -4.097 1.00 0.00 ATOM 519 NE ARG 32 -6.888 7.389 -5.255 1.00 0.00 ATOM 521 CZ ARG 32 -7.077 6.098 -5.484 1.00 0.00 ATOM 522 NH1 ARG 32 -7.520 5.704 -6.640 1.00 0.00 ATOM 525 NH2 ARG 32 -6.817 5.165 -4.620 1.00 0.00 ATOM 528 C ARG 32 -1.804 8.744 -1.691 1.00 0.00 ATOM 529 O ARG 32 -2.354 8.978 -0.616 1.00 0.00 ATOM 530 N CYS 33 -0.571 9.158 -1.951 1.00 0.00 ATOM 532 CA CYS 33 0.186 10.098 -1.130 1.00 0.00 ATOM 534 CB CYS 33 1.660 10.022 -1.544 1.00 0.00 ATOM 537 SG CYS 33 2.299 8.329 -1.434 1.00 0.00 ATOM 539 C CYS 33 -0.307 11.532 -1.304 1.00 0.00 ATOM 540 O CYS 33 -0.642 11.922 -2.422 1.00 0.00 ATOM 541 N SER 34 -0.253 12.355 -0.248 1.00 0.00 ATOM 543 CA SER 34 -0.557 13.805 -0.332 1.00 0.00 ATOM 545 CB SER 34 -0.767 14.358 1.080 1.00 0.00 ATOM 548 OG SER 34 -1.718 13.558 1.764 1.00 0.00 ATOM 550 C SER 34 0.503 14.641 -1.093 1.00 0.00 ATOM 551 O SER 34 0.895 15.717 -0.656 1.00 0.00 ATOM 552 N ASP 35 0.980 14.100 -2.217 1.00 0.00 ATOM 554 CA ASP 35 2.160 14.472 -3.004 1.00 0.00 ATOM 556 CB ASP 35 3.427 14.418 -2.105 1.00 0.00 ATOM 559 CG ASP 35 3.617 13.146 -1.255 1.00 0.00 ATOM 560 OD1 ASP 35 2.892 12.933 -0.253 1.00 0.00 ATOM 561 OD2 ASP 35 4.577 12.372 -1.477 1.00 0.00 ATOM 562 C ASP 35 2.349 13.581 -4.252 1.00 0.00 ATOM 563 O ASP 35 3.067 13.986 -5.163 1.00 0.00 ATOM 564 N THR 36 1.718 12.393 -4.346 1.00 0.39 ATOM 566 CA THR 36 1.860 11.501 -5.522 1.00 0.39 ATOM 568 CB THR 36 3.285 10.911 -5.629 1.00 0.39 ATOM 570 CG2 THR 36 3.644 9.864 -4.575 1.00 0.39 ATOM 574 OG1 THR 36 3.460 10.322 -6.898 1.00 0.39 ATOM 576 C THR 36 0.789 10.411 -5.592 1.00 0.39 ATOM 577 O THR 36 0.058 10.189 -4.632 1.00 0.39 ATOM 578 N LYS 37 0.694 9.663 -6.690 1.00 0.81 ATOM 580 CA LYS 37 -0.178 8.487 -6.783 1.00 0.81 ATOM 582 CB LYS 37 -1.473 8.839 -7.542 1.00 0.81 ATOM 585 CG LYS 37 -2.560 7.759 -7.416 1.00 0.81 ATOM 588 CD LYS 37 -2.417 6.586 -8.395 1.00 0.81 ATOM 591 CE LYS 37 -3.567 5.610 -8.172 1.00 0.81 ATOM 594 NZ LYS 37 -3.481 4.437 -9.066 1.00 0.81 ATOM 598 C LYS 37 0.603 7.332 -7.376 1.00 0.81 ATOM 599 O LYS 37 0.699 7.169 -8.592 1.00 0.81 ATOM 600 N TYR 38 1.156 6.520 -6.487 1.00 0.89 ATOM 602 CA TYR 38 1.699 5.223 -6.845 1.00 0.89 ATOM 604 CB TYR 38 2.581 4.688 -5.692 1.00 0.89 ATOM 607 CG TYR 38 4.062 4.698 -5.998 1.00 0.89 ATOM 608 CD1 TYR 38 4.903 5.656 -5.400 1.00 0.89 ATOM 610 CE1 TYR 38 6.277 5.679 -5.711 1.00 0.89 ATOM 612 CZ TYR 38 6.810 4.745 -6.624 1.00 0.89 ATOM 613 OH TYR 38 8.133 4.782 -6.929 1.00 0.89 ATOM 615 CE2 TYR 38 5.972 3.774 -7.209 1.00 0.89 ATOM 617 CD2 TYR 38 4.600 3.750 -6.891 1.00 0.89 ATOM 619 C TYR 38 0.561 4.229 -7.145 1.00 0.89 ATOM 620 O TYR 38 -0.526 4.268 -6.572 1.00 0.89 ATOM 621 N THR 39 0.892 3.236 -7.960 1.00 1.00 ATOM 623 CA THR 39 0.351 1.884 -7.811 1.00 1.00 ATOM 625 CB THR 39 -0.611 1.527 -8.956 1.00 1.00 ATOM 627 CG2 THR 39 -0.928 0.036 -9.087 1.00 1.00 ATOM 631 OG1 THR 39 -1.871 2.123 -8.731 1.00 1.00 ATOM 633 C THR 39 1.559 0.954 -7.767 1.00 1.00 ATOM 634 O THR 39 2.556 1.201 -8.446 1.00 1.00 ATOM 635 N LEU 40 1.489 -0.092 -6.953 1.00 1.14 ATOM 637 CA LEU 40 2.530 -1.096 -6.765 1.00 1.14 ATOM 639 CB LEU 40 3.520 -0.634 -5.675 1.00 1.14 ATOM 642 CG LEU 40 2.927 -0.328 -4.287 1.00 1.14 ATOM 644 CD1 LEU 40 2.927 -1.565 -3.382 1.00 1.14 ATOM 648 CD2 LEU 40 3.754 0.768 -3.619 1.00 1.14 ATOM 652 C LEU 40 1.912 -2.482 -6.585 1.00 1.14 ATOM 653 O LEU 40 0.692 -2.606 -6.636 1.00 1.14 ATOM 654 N CYS 41 2.707 -3.546 -6.471 1.00 1.41 ATOM 656 CA CYS 41 2.220 -4.925 -6.647 1.00 1.41 ATOM 658 CB CYS 41 1.513 -5.410 -5.369 1.00 1.41 ATOM 661 SG CYS 41 2.641 -5.437 -3.948 1.00 1.41 ATOM 663 C CYS 41 1.347 -5.089 -7.904 1.00 1.41 ATOM 664 O CYS 41 1.084 -4.167 -8.677 1.00 1.41 TER END