####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS116_1 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS116_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 2.04 2.04 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 40 2 - 41 1.95 2.04 LCS_AVERAGE: 97.20 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 2 - 17 0.94 4.13 LCS_AVERAGE: 32.78 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 34 41 3 3 3 4 7 15 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 16 40 41 11 14 22 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 16 40 41 11 14 22 29 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 16 40 41 11 14 22 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 16 40 41 11 14 22 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 16 40 41 11 14 22 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 16 40 41 11 14 22 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 16 40 41 11 14 18 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 16 40 41 11 14 22 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 16 40 41 11 14 22 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 16 40 41 11 14 17 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 16 40 41 11 14 15 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 16 40 41 10 14 22 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 16 40 41 10 14 15 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 16 40 41 5 14 15 23 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 16 40 41 3 5 8 19 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 16 40 41 4 11 22 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 7 40 41 7 12 22 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 7 40 41 7 12 18 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 7 40 41 6 12 22 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 7 40 41 5 12 22 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 7 40 41 3 8 18 21 33 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 7 40 41 3 10 18 21 33 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 7 40 41 3 10 18 21 33 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 9 40 41 6 12 18 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 9 40 41 3 5 8 13 22 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 15 40 41 7 12 22 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 15 40 41 7 12 22 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 15 40 41 6 12 22 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 15 40 41 7 12 22 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 15 40 41 7 12 22 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 15 40 41 7 12 22 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 15 40 41 6 12 22 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 15 40 41 3 12 18 26 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 15 40 41 3 12 18 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 15 40 41 3 10 18 29 34 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 15 40 41 7 12 22 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 15 40 41 7 12 22 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 15 40 41 5 12 19 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 15 40 41 7 12 18 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 15 40 41 5 5 17 22 33 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 76.66 ( 32.78 97.20 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 14 22 30 34 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 GDT PERCENT_AT 26.83 34.15 53.66 73.17 82.93 92.68 97.56 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.33 0.57 1.22 1.51 1.61 1.89 1.95 2.04 2.04 2.04 2.04 2.04 2.04 2.04 2.04 2.04 2.04 2.04 2.04 2.04 GDT RMS_ALL_AT 5.06 5.21 2.20 2.07 2.09 2.04 2.04 2.04 2.04 2.04 2.04 2.04 2.04 2.04 2.04 2.04 2.04 2.04 2.04 2.04 # Checking swapping # possible swapping detected: D 23 D 23 # possible swapping detected: E 30 E 30 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 4.097 0 0.426 0.562 5.170 5.455 4.848 4.640 LGA Q 2 Q 2 1.867 0 0.272 0.688 2.508 47.727 45.657 2.508 LGA E 3 E 3 2.260 0 0.064 0.903 6.240 41.364 21.414 6.240 LGA T 4 T 4 1.808 0 0.041 1.156 3.953 54.545 41.558 3.953 LGA R 5 R 5 1.032 0 0.054 0.859 3.741 69.545 42.149 3.163 LGA K 6 K 6 1.514 0 0.049 1.095 5.925 61.818 32.929 5.925 LGA K 7 K 7 1.849 0 0.040 0.949 4.221 54.545 34.747 3.040 LGA C 8 C 8 1.886 0 0.054 0.622 2.400 54.545 51.212 1.935 LGA T 9 T 9 1.482 0 0.043 1.036 3.440 65.455 54.805 3.440 LGA E 10 E 10 1.653 0 0.038 0.540 5.093 58.182 37.374 5.093 LGA M 11 M 11 1.872 0 0.071 1.509 3.866 51.364 42.273 3.866 LGA K 12 K 12 1.889 0 0.055 0.908 3.765 50.909 35.556 3.765 LGA K 13 K 13 1.759 0 0.045 1.524 7.656 61.818 32.929 7.653 LGA K 14 K 14 1.955 0 0.046 1.195 5.115 48.182 34.343 5.115 LGA F 15 F 15 2.574 0 0.458 0.792 5.600 22.273 42.149 1.253 LGA K 16 K 16 2.856 0 0.101 1.236 3.842 30.455 36.364 1.028 LGA N 17 N 17 0.891 0 0.472 1.033 4.659 60.000 46.136 3.359 LGA C 18 C 18 1.010 0 0.098 0.131 1.417 69.545 68.182 1.374 LGA E 19 E 19 1.837 0 0.328 1.122 6.700 54.545 31.717 5.450 LGA V 20 V 20 1.563 0 0.131 1.125 4.670 54.545 51.169 0.404 LGA R 21 R 21 1.458 0 0.089 1.413 4.129 61.818 43.802 4.084 LGA C 22 C 22 2.858 0 0.057 0.828 4.853 32.727 25.152 4.853 LGA D 23 D 23 3.280 0 0.151 0.482 4.507 12.273 15.909 2.271 LGA E 24 E 24 3.508 0 0.664 0.583 5.660 11.818 6.869 5.660 LGA S 25 S 25 1.918 0 0.549 0.721 5.506 50.909 38.485 5.506 LGA N 26 N 26 3.370 0 0.721 1.088 9.296 34.545 17.273 8.824 LGA H 27 H 27 1.119 0 0.468 1.570 6.046 51.818 34.182 6.046 LGA C 28 C 28 1.414 0 0.109 0.852 3.947 61.818 51.515 3.947 LGA V 29 V 29 1.350 0 0.157 1.151 3.768 61.818 51.688 3.768 LGA E 30 E 30 0.826 0 0.044 0.645 3.508 81.818 53.737 2.567 LGA V 31 V 31 1.042 0 0.059 0.102 1.070 73.636 74.805 1.050 LGA R 32 R 32 1.271 0 0.246 0.981 8.256 52.273 32.231 8.256 LGA C 33 C 33 1.182 0 0.496 0.547 2.259 62.727 61.212 1.517 LGA S 34 S 34 2.265 0 0.058 0.691 2.837 41.364 36.667 2.837 LGA D 35 D 35 2.149 0 0.118 1.220 2.633 38.636 53.864 0.453 LGA T 36 T 36 2.445 0 0.224 1.028 5.127 59.091 36.883 3.556 LGA K 37 K 37 1.480 0 0.167 1.009 4.656 61.818 49.697 4.656 LGA Y 38 Y 38 0.789 0 0.049 1.348 6.049 73.636 45.455 6.049 LGA T 39 T 39 1.253 0 0.188 0.186 1.968 69.545 61.558 1.734 LGA L 40 L 40 1.937 0 0.143 1.058 4.617 35.000 29.318 2.199 LGA C 41 C 41 2.789 0 0.236 0.375 3.871 30.000 28.052 3.871 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 2.037 2.066 2.975 50.632 39.899 22.749 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 41 2.04 76.829 87.052 1.918 LGA_LOCAL RMSD: 2.037 Number of atoms: 41 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.037 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 2.037 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.884833 * X + -0.275898 * Y + -0.375434 * Z + -6.115739 Y_new = -0.162069 * X + 0.937755 * Y + -0.307165 * Z + 71.386238 Z_new = 0.436811 * X + -0.210943 * Y + -0.874471 * Z + -24.272579 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.960437 -0.452050 -2.904891 [DEG: -169.6205 -25.9006 -166.4380 ] ZXZ: -0.885081 2.635140 2.020684 [DEG: -50.7114 150.9824 115.7767 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS116_1 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS116_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 41 2.04 87.052 2.04 REMARK ---------------------------------------------------------- MOLECULE T0955TS116_1 PFRMAT TS TARGET T0955 MODEL 1 PARENT 3nuhB 3nuhB2 2nwvA 2id1A 2nvwA3 ATOM 1 N SER 1 -0.463 -11.445 -1.075 1.00 17.88 N ATOM 2 CA SER 1 -1.657 -11.426 -0.202 1.00 17.88 C ATOM 3 CB SER 1 -2.226 -12.845 -0.050 1.00 17.88 C ATOM 4 OG SER 1 -2.729 -13.304 -1.297 1.00 17.88 O ATOM 5 C SER 1 -1.290 -10.909 1.146 1.00 17.88 C ATOM 6 O SER 1 -1.184 -9.702 1.356 1.00 17.88 O ATOM 7 N GLN 2 -1.075 -11.831 2.101 1.00 47.79 N ATOM 8 CA GLN 2 -0.729 -11.414 3.424 1.00 47.79 C ATOM 9 CB GLN 2 -0.526 -12.601 4.384 1.00 47.79 C ATOM 10 CG GLN 2 -1.786 -13.438 4.613 1.00 47.79 C ATOM 11 CD GLN 2 -1.431 -14.568 5.568 1.00 47.79 C ATOM 12 OE1 GLN 2 -2.304 -15.196 6.162 1.00 47.79 O ATOM 13 NE2 GLN 2 -0.107 -14.835 5.729 1.00 47.79 N ATOM 14 C GLN 2 0.574 -10.695 3.319 1.00 47.79 C ATOM 15 O GLN 2 0.758 -9.635 3.915 1.00 47.79 O ATOM 16 N GLU 3 1.502 -11.252 2.518 1.00 36.23 N ATOM 17 CA GLU 3 2.815 -10.698 2.347 1.00 36.23 C ATOM 18 CB GLU 3 3.709 -11.583 1.462 1.00 36.23 C ATOM 19 CG GLU 3 4.020 -12.942 2.091 1.00 36.23 C ATOM 20 CD GLU 3 4.773 -13.771 1.063 1.00 36.23 C ATOM 21 OE1 GLU 3 4.830 -13.338 -0.118 1.00 36.23 O ATOM 22 OE2 GLU 3 5.297 -14.851 1.445 1.00 36.23 O ATOM 23 C GLU 3 2.715 -9.366 1.683 1.00 36.23 C ATOM 24 O GLU 3 3.422 -8.429 2.054 1.00 36.23 O ATOM 25 N THR 4 1.825 -9.261 0.677 1.00 36.16 N ATOM 26 CA THR 4 1.666 -8.064 -0.099 1.00 36.16 C ATOM 27 CB THR 4 0.663 -8.227 -1.205 1.00 36.16 C ATOM 28 OG1 THR 4 1.026 -9.315 -2.043 1.00 36.16 O ATOM 29 CG2 THR 4 0.631 -6.926 -2.025 1.00 36.16 C ATOM 30 C THR 4 1.177 -6.971 0.784 1.00 36.16 C ATOM 31 O THR 4 1.640 -5.838 0.694 1.00 36.16 O ATOM 32 N ARG 5 0.212 -7.298 1.663 1.00150.72 N ATOM 33 CA ARG 5 -0.400 -6.353 2.553 1.00150.72 C ATOM 34 CB ARG 5 -1.489 -7.031 3.398 1.00150.72 C ATOM 35 CG ARG 5 -2.269 -6.095 4.321 1.00150.72 C ATOM 36 CD ARG 5 -3.073 -6.858 5.376 1.00150.72 C ATOM 37 NE ARG 5 -3.923 -7.848 4.659 1.00150.72 N ATOM 38 CZ ARG 5 -3.956 -9.145 5.086 1.00150.72 C ATOM 39 NH1 ARG 5 -3.224 -9.524 6.173 1.00150.72 N ATOM 40 NH2 ARG 5 -4.708 -10.066 4.415 1.00150.72 N ATOM 41 C ARG 5 0.631 -5.825 3.495 1.00150.72 C ATOM 42 O ARG 5 0.656 -4.628 3.776 1.00150.72 O ATOM 43 N LYS 6 1.507 -6.709 4.018 1.00 82.04 N ATOM 44 CA LYS 6 2.487 -6.249 4.962 1.00 82.04 C ATOM 45 CB LYS 6 3.337 -7.364 5.600 1.00 82.04 C ATOM 46 CG LYS 6 2.543 -8.317 6.497 1.00 82.04 C ATOM 47 CD LYS 6 3.402 -9.420 7.123 1.00 82.04 C ATOM 48 CE LYS 6 4.127 -10.304 6.110 1.00 82.04 C ATOM 49 NZ LYS 6 5.169 -11.103 6.794 1.00 82.04 N ATOM 50 C LYS 6 3.427 -5.299 4.303 1.00 82.04 C ATOM 51 O LYS 6 3.825 -4.302 4.912 1.00 82.04 O ATOM 52 N LYS 7 3.824 -5.587 3.051 1.00 80.93 N ATOM 53 CA LYS 7 4.767 -4.732 2.385 1.00 80.93 C ATOM 54 CB LYS 7 5.189 -5.244 0.998 1.00 80.93 C ATOM 55 CG LYS 7 6.007 -6.537 1.035 1.00 80.93 C ATOM 56 CD LYS 7 6.215 -7.147 -0.352 1.00 80.93 C ATOM 57 CE LYS 7 7.254 -6.397 -1.186 1.00 80.93 C ATOM 58 NZ LYS 7 7.369 -7.004 -2.533 1.00 80.93 N ATOM 59 C LYS 7 4.178 -3.371 2.187 1.00 80.93 C ATOM 60 O LYS 7 4.875 -2.365 2.338 1.00 80.93 O ATOM 61 N CYS 8 2.882 -3.307 1.815 1.00138.32 N ATOM 62 CA CYS 8 2.280 -2.028 1.548 1.00138.32 C ATOM 63 CB CYS 8 0.855 -2.110 0.964 1.00138.32 C ATOM 64 SG CYS 8 -0.432 -2.524 2.176 1.00138.32 S ATOM 65 C CYS 8 2.234 -1.211 2.804 1.00138.32 C ATOM 66 O CYS 8 2.455 0.001 2.766 1.00138.32 O ATOM 67 N THR 9 1.930 -1.856 3.952 1.00116.52 N ATOM 68 CA THR 9 1.831 -1.123 5.187 1.00116.52 C ATOM 69 CB THR 9 1.342 -1.936 6.356 1.00116.52 C ATOM 70 OG1 THR 9 1.003 -1.073 7.431 1.00116.52 O ATOM 71 CG2 THR 9 2.445 -2.899 6.813 1.00116.52 C ATOM 72 C THR 9 3.165 -0.549 5.551 1.00116.52 C ATOM 73 O THR 9 3.234 0.573 6.051 1.00116.52 O ATOM 74 N GLU 10 4.256 -1.316 5.332 1.00 79.23 N ATOM 75 CA GLU 10 5.572 -0.849 5.687 1.00 79.23 C ATOM 76 CB GLU 10 6.664 -1.893 5.413 1.00 79.23 C ATOM 77 CG GLU 10 8.073 -1.415 5.777 1.00 79.23 C ATOM 78 CD GLU 10 9.062 -2.453 5.265 1.00 79.23 C ATOM 79 OE1 GLU 10 8.598 -3.504 4.750 1.00 79.23 O ATOM 80 OE2 GLU 10 10.293 -2.211 5.377 1.00 79.23 O ATOM 81 C GLU 10 5.920 0.353 4.870 1.00 79.23 C ATOM 82 O GLU 10 6.511 1.302 5.385 1.00 79.23 O ATOM 83 N MET 11 5.574 0.333 3.567 1.00107.83 N ATOM 84 CA MET 11 5.924 1.433 2.708 1.00107.83 C ATOM 85 CB MET 11 5.517 1.216 1.242 1.00107.83 C ATOM 86 CG MET 11 6.048 2.311 0.315 1.00107.83 C ATOM 87 SD MET 11 5.587 2.117 -1.430 1.00107.83 S ATOM 88 CE MET 11 3.915 2.774 -1.191 1.00107.83 C ATOM 89 C MET 11 5.220 2.674 3.165 1.00107.83 C ATOM 90 O MET 11 5.805 3.756 3.163 1.00107.83 O ATOM 91 N LYS 12 3.935 2.550 3.556 1.00124.33 N ATOM 92 CA LYS 12 3.165 3.698 3.963 1.00124.33 C ATOM 93 CB LYS 12 1.712 3.324 4.311 1.00124.33 C ATOM 94 CG LYS 12 0.858 4.513 4.753 1.00124.33 C ATOM 95 CD LYS 12 -0.622 4.173 4.925 1.00124.33 C ATOM 96 CE LYS 12 -0.892 3.151 6.034 1.00124.33 C ATOM 97 NZ LYS 12 -0.636 3.747 7.366 1.00124.33 N ATOM 98 C LYS 12 3.768 4.308 5.187 1.00124.33 C ATOM 99 O LYS 12 3.834 5.532 5.309 1.00124.33 O ATOM 100 N LYS 13 4.206 3.463 6.138 1.00147.29 N ATOM 101 CA LYS 13 4.775 3.966 7.359 1.00147.29 C ATOM 102 CB LYS 13 5.143 2.840 8.339 1.00147.29 C ATOM 103 CG LYS 13 5.908 3.323 9.569 1.00147.29 C ATOM 104 CD LYS 13 5.103 4.223 10.501 1.00147.29 C ATOM 105 CE LYS 13 5.914 4.675 11.713 1.00147.29 C ATOM 106 NZ LYS 13 7.134 5.377 11.256 1.00147.29 N ATOM 107 C LYS 13 6.037 4.721 7.070 1.00147.29 C ATOM 108 O LYS 13 6.304 5.757 7.686 1.00147.29 O ATOM 109 N LYS 14 6.875 4.202 6.150 1.00107.89 N ATOM 110 CA LYS 14 8.113 4.885 5.909 1.00107.89 C ATOM 111 CB LYS 14 9.102 4.146 4.988 1.00107.89 C ATOM 112 CG LYS 14 8.896 4.389 3.494 1.00107.89 C ATOM 113 CD LYS 14 10.137 4.023 2.676 1.00107.89 C ATOM 114 CE LYS 14 10.101 4.528 1.232 1.00107.89 C ATOM 115 NZ LYS 14 11.414 4.305 0.583 1.00107.89 N ATOM 116 C LYS 14 7.848 6.236 5.301 1.00107.89 C ATOM 117 O LYS 14 8.514 7.214 5.643 1.00107.89 O ATOM 118 N PHE 15 6.876 6.329 4.365 1.00184.22 N ATOM 119 CA PHE 15 6.600 7.593 3.727 1.00184.22 C ATOM 120 CB PHE 15 5.591 7.506 2.568 1.00184.22 C ATOM 121 CG PHE 15 6.322 6.949 1.396 1.00184.22 C ATOM 122 CD1 PHE 15 6.518 5.595 1.269 1.00184.22 C ATOM 123 CD2 PHE 15 6.817 7.782 0.420 1.00184.22 C ATOM 124 CE1 PHE 15 7.191 5.072 0.192 1.00184.22 C ATOM 125 CE2 PHE 15 7.491 7.265 -0.663 1.00184.22 C ATOM 126 CZ PHE 15 7.683 5.908 -0.780 1.00184.22 C ATOM 127 C PHE 15 6.079 8.596 4.717 1.00184.22 C ATOM 128 O PHE 15 6.485 9.760 4.717 1.00184.22 O ATOM 129 N LYS 16 5.156 8.152 5.588 1.00351.05 N ATOM 130 CA LYS 16 4.590 8.966 6.626 1.00351.05 C ATOM 131 CB LYS 16 5.668 9.795 7.349 1.00351.05 C ATOM 132 CG LYS 16 5.226 10.394 8.686 1.00351.05 C ATOM 133 CD LYS 16 5.165 9.370 9.822 1.00351.05 C ATOM 134 CE LYS 16 3.925 8.481 9.783 1.00351.05 C ATOM 135 NZ LYS 16 2.759 9.221 10.316 1.00351.05 N ATOM 136 C LYS 16 3.555 9.933 6.104 1.00351.05 C ATOM 137 O LYS 16 2.983 10.681 6.895 1.00351.05 O ATOM 138 N ASN 17 3.257 9.966 4.788 1.00212.51 N ATOM 139 CA ASN 17 2.159 10.809 4.378 1.00212.51 C ATOM 140 CB ASN 17 2.583 12.212 3.917 1.00212.51 C ATOM 141 CG ASN 17 1.324 13.069 3.877 1.00212.51 C ATOM 142 OD1 ASN 17 0.262 12.651 4.336 1.00212.51 O ATOM 143 ND2 ASN 17 1.441 14.300 3.312 1.00212.51 N ATOM 144 C ASN 17 1.512 10.137 3.217 1.00212.51 C ATOM 145 O ASN 17 1.588 10.630 2.094 1.00212.51 O ATOM 146 N CYS 18 0.832 9.001 3.462 1.00 82.57 N ATOM 147 CA CYS 18 0.230 8.299 2.369 1.00 82.57 C ATOM 148 CB CYS 18 1.215 7.398 1.599 1.00 82.57 C ATOM 149 SG CYS 18 2.476 8.316 0.665 1.00 82.57 S ATOM 150 C CYS 18 -0.805 7.374 2.925 1.00 82.57 C ATOM 151 O CYS 18 -0.982 7.271 4.137 1.00 82.57 O ATOM 152 N GLU 19 -1.535 6.684 2.023 1.00272.68 N ATOM 153 CA GLU 19 -2.515 5.722 2.434 1.00272.68 C ATOM 154 CB GLU 19 -3.968 6.174 2.200 1.00272.68 C ATOM 155 CG GLU 19 -5.009 5.276 2.873 1.00272.68 C ATOM 156 CD GLU 19 -5.139 5.717 4.325 1.00272.68 C ATOM 157 OE1 GLU 19 -4.278 5.307 5.149 1.00272.68 O ATOM 158 OE2 GLU 19 -6.097 6.476 4.626 1.00272.68 O ATOM 159 C GLU 19 -2.301 4.505 1.585 1.00272.68 C ATOM 160 O GLU 19 -1.810 4.609 0.464 1.00272.68 O ATOM 161 N VAL 20 -2.638 3.304 2.104 1.00148.42 N ATOM 162 CA VAL 20 -2.451 2.118 1.314 1.00148.42 C ATOM 163 CB VAL 20 -1.557 1.095 1.958 1.00148.42 C ATOM 164 CG1 VAL 20 -0.136 1.674 2.088 1.00148.42 C ATOM 165 CG2 VAL 20 -2.184 0.667 3.297 1.00148.42 C ATOM 166 C VAL 20 -3.782 1.458 1.126 1.00148.42 C ATOM 167 O VAL 20 -4.597 1.406 2.045 1.00148.42 O ATOM 168 N ARG 21 -4.038 0.938 -0.094 1.00332.84 N ATOM 169 CA ARG 21 -5.280 0.267 -0.352 1.00332.84 C ATOM 170 CB ARG 21 -6.233 1.059 -1.257 1.00332.84 C ATOM 171 CG ARG 21 -7.557 0.343 -1.517 1.00332.84 C ATOM 172 CD ARG 21 -8.417 1.067 -2.551 1.00332.84 C ATOM 173 NE ARG 21 -8.600 2.462 -2.058 1.00332.84 N ATOM 174 CZ ARG 21 -8.443 3.512 -2.915 1.00332.84 C ATOM 175 NH1 ARG 21 -8.179 3.281 -4.234 1.00332.84 N ATOM 176 NH2 ARG 21 -8.526 4.792 -2.448 1.00332.84 N ATOM 177 C ARG 21 -4.973 -0.998 -1.083 1.00332.84 C ATOM 178 O ARG 21 -4.067 -1.042 -1.912 1.00332.84 O ATOM 179 N CYS 22 -5.714 -2.079 -0.771 1.00134.24 N ATOM 180 CA CYS 22 -5.509 -3.298 -1.497 1.00134.24 C ATOM 181 CB CYS 22 -5.000 -4.473 -0.642 1.00134.24 C ATOM 182 SG CYS 22 -6.197 -5.010 0.616 1.00134.24 S ATOM 183 C CYS 22 -6.833 -3.688 -2.047 1.00134.24 C ATOM 184 O CYS 22 -7.858 -3.546 -1.384 1.00134.24 O ATOM 185 N ASP 23 -6.845 -4.171 -3.300 1.00193.57 N ATOM 186 CA ASP 23 -8.094 -4.575 -3.857 1.00193.57 C ATOM 187 CB ASP 23 -8.394 -3.962 -5.234 1.00193.57 C ATOM 188 CG ASP 23 -8.765 -2.507 -4.995 1.00193.57 C ATOM 189 OD1 ASP 23 -9.541 -2.251 -4.036 1.00193.57 O ATOM 190 OD2 ASP 23 -8.287 -1.633 -5.766 1.00193.57 O ATOM 191 C ASP 23 -8.072 -6.056 -3.985 1.00193.57 C ATOM 192 O ASP 23 -7.057 -6.647 -4.353 1.00193.57 O ATOM 193 N GLU 24 -9.199 -6.705 -3.640 1.00292.90 N ATOM 194 CA GLU 24 -9.240 -8.128 -3.743 1.00292.90 C ATOM 195 CB GLU 24 -10.418 -8.771 -2.996 1.00292.90 C ATOM 196 CG GLU 24 -11.792 -8.411 -3.563 1.00292.90 C ATOM 197 CD GLU 24 -12.833 -9.128 -2.712 1.00292.90 C ATOM 198 OE1 GLU 24 -12.443 -9.706 -1.662 1.00292.90 O ATOM 199 OE2 GLU 24 -14.030 -9.111 -3.101 1.00292.90 O ATOM 200 C GLU 24 -9.368 -8.467 -5.188 1.00292.90 C ATOM 201 O GLU 24 -10.067 -7.792 -5.941 1.00292.90 O ATOM 202 N SER 25 -8.646 -9.526 -5.590 1.00278.54 N ATOM 203 CA SER 25 -8.579 -10.029 -6.930 1.00278.54 C ATOM 204 CB SER 25 -8.692 -8.945 -8.020 1.00278.54 C ATOM 205 OG SER 25 -8.642 -9.532 -9.315 1.00278.54 O ATOM 206 C SER 25 -7.198 -10.584 -6.952 1.00278.54 C ATOM 207 O SER 25 -6.717 -11.044 -5.917 1.00278.54 O ATOM 208 N ASN 26 -6.519 -10.589 -8.114 1.00229.60 N ATOM 209 CA ASN 26 -5.145 -10.985 -8.040 1.00229.60 C ATOM 210 CB ASN 26 -4.405 -10.953 -9.389 1.00229.60 C ATOM 211 CG ASN 26 -4.949 -12.089 -10.246 1.00229.60 C ATOM 212 OD1 ASN 26 -4.623 -12.203 -11.427 1.00229.60 O ATOM 213 ND2 ASN 26 -5.808 -12.952 -9.641 1.00229.60 N ATOM 214 C ASN 26 -4.549 -9.940 -7.158 1.00229.60 C ATOM 215 O ASN 26 -4.965 -8.783 -7.214 1.00229.60 O ATOM 216 N HIS 27 -3.583 -10.323 -6.301 1.00115.60 N ATOM 217 CA HIS 27 -3.095 -9.376 -5.343 1.00115.60 C ATOM 218 ND1 HIS 27 -0.611 -11.588 -5.784 1.00115.60 N ATOM 219 CG HIS 27 -0.760 -10.362 -5.177 1.00115.60 C ATOM 220 CB HIS 27 -1.987 -9.936 -4.430 1.00115.60 C ATOM 221 NE2 HIS 27 1.273 -10.465 -6.148 1.00115.60 N ATOM 222 CD2 HIS 27 0.399 -9.687 -5.410 1.00115.60 C ATOM 223 CE1 HIS 27 0.623 -11.596 -6.350 1.00115.60 C ATOM 224 C HIS 27 -2.563 -8.179 -6.050 1.00115.60 C ATOM 225 O HIS 27 -1.709 -8.275 -6.930 1.00115.60 O ATOM 226 N CYS 28 -3.109 -7.005 -5.682 1.00 85.77 N ATOM 227 CA CYS 28 -2.674 -5.748 -6.208 1.00 85.77 C ATOM 228 CB CYS 28 -3.575 -5.196 -7.330 1.00 85.77 C ATOM 229 SG CYS 28 -5.288 -4.896 -6.791 1.00 85.77 S ATOM 230 C CYS 28 -2.737 -4.790 -5.070 1.00 85.77 C ATOM 231 O CYS 28 -3.643 -4.860 -4.242 1.00 85.77 O ATOM 232 N VAL 29 -1.755 -3.880 -4.972 1.00115.89 N ATOM 233 CA VAL 29 -1.839 -2.935 -3.904 1.00115.89 C ATOM 234 CB VAL 29 -0.759 -3.068 -2.872 1.00115.89 C ATOM 235 CG1 VAL 29 -0.930 -4.428 -2.176 1.00115.89 C ATOM 236 CG2 VAL 29 0.607 -2.881 -3.550 1.00115.89 C ATOM 237 C VAL 29 -1.717 -1.588 -4.509 1.00115.89 C ATOM 238 O VAL 29 -0.997 -1.392 -5.487 1.00115.89 O ATOM 239 N GLU 30 -2.457 -0.618 -3.948 1.00205.96 N ATOM 240 CA GLU 30 -2.373 0.705 -4.470 1.00205.96 C ATOM 241 CB GLU 30 -3.693 1.179 -5.099 1.00205.96 C ATOM 242 CG GLU 30 -4.106 0.336 -6.312 1.00205.96 C ATOM 243 CD GLU 30 -5.481 0.793 -6.765 1.00205.96 C ATOM 244 OE1 GLU 30 -5.965 1.822 -6.223 1.00205.96 O ATOM 245 OE2 GLU 30 -6.069 0.120 -7.655 1.00205.96 O ATOM 246 C GLU 30 -2.045 1.598 -3.328 1.00205.96 C ATOM 247 O GLU 30 -2.517 1.398 -2.210 1.00205.96 O ATOM 248 N VAL 31 -1.194 2.605 -3.581 1.00 57.58 N ATOM 249 CA VAL 31 -0.853 3.501 -2.525 1.00 57.58 C ATOM 250 CB VAL 31 0.617 3.577 -2.256 1.00 57.58 C ATOM 251 CG1 VAL 31 0.877 4.656 -1.191 1.00 57.58 C ATOM 252 CG2 VAL 31 1.089 2.173 -1.848 1.00 57.58 C ATOM 253 C VAL 31 -1.319 4.846 -2.944 1.00 57.58 C ATOM 254 O VAL 31 -1.297 5.186 -4.125 1.00 57.58 O ATOM 255 N ARG 32 -1.794 5.643 -1.976 1.00143.28 N ATOM 256 CA ARG 32 -2.229 6.955 -2.318 1.00143.28 C ATOM 257 CB ARG 32 -3.626 7.309 -1.783 1.00143.28 C ATOM 258 CG ARG 32 -4.054 8.725 -2.164 1.00143.28 C ATOM 259 CD ARG 32 -5.369 9.179 -1.530 1.00143.28 C ATOM 260 NE ARG 32 -5.209 9.092 -0.052 1.00143.28 N ATOM 261 CZ ARG 32 -5.525 10.165 0.728 1.00143.28 C ATOM 262 NH1 ARG 32 -5.903 11.342 0.151 1.00143.28 N ATOM 263 NH2 ARG 32 -5.458 10.069 2.088 1.00143.28 N ATOM 264 C ARG 32 -1.266 7.900 -1.685 1.00143.28 C ATOM 265 O ARG 32 -0.848 7.716 -0.542 1.00143.28 O ATOM 266 N CYS 33 -0.861 8.932 -2.447 1.00 46.23 N ATOM 267 CA CYS 33 0.032 9.920 -1.929 1.00 46.23 C ATOM 268 CB CYS 33 1.358 10.032 -2.704 1.00 46.23 C ATOM 269 SG CYS 33 2.361 8.518 -2.603 1.00 46.23 S ATOM 270 C CYS 33 -0.684 11.216 -2.073 1.00 46.23 C ATOM 271 O CYS 33 -1.729 11.295 -2.719 1.00 46.23 O ATOM 272 N SER 34 -0.151 12.274 -1.443 1.00131.72 N ATOM 273 CA SER 34 -0.828 13.530 -1.509 1.00131.72 C ATOM 274 CB SER 34 -0.081 14.659 -0.774 1.00131.72 C ATOM 275 OG SER 34 1.180 14.902 -1.384 1.00131.72 O ATOM 276 C SER 34 -0.948 13.922 -2.946 1.00131.72 C ATOM 277 O SER 34 -2.049 14.161 -3.440 1.00131.72 O ATOM 278 N ASP 35 0.186 13.977 -3.670 1.00127.01 N ATOM 279 CA ASP 35 0.108 14.427 -5.027 1.00127.01 C ATOM 280 CB ASP 35 1.480 14.579 -5.704 1.00127.01 C ATOM 281 CG ASP 35 1.290 15.374 -6.993 1.00127.01 C ATOM 282 OD1 ASP 35 0.191 15.962 -7.175 1.00127.01 O ATOM 283 OD2 ASP 35 2.243 15.402 -7.815 1.00127.01 O ATOM 284 C ASP 35 -0.683 13.451 -5.842 1.00127.01 C ATOM 285 O ASP 35 -1.622 13.841 -6.534 1.00127.01 O ATOM 286 N THR 36 -0.345 12.145 -5.771 1.00289.65 N ATOM 287 CA THR 36 -1.051 11.210 -6.603 1.00289.65 C ATOM 288 CB THR 36 -0.467 11.077 -7.984 1.00289.65 C ATOM 289 OG1 THR 36 0.855 10.561 -7.908 1.00289.65 O ATOM 290 CG2 THR 36 -0.465 12.456 -8.671 1.00289.65 C ATOM 291 C THR 36 -1.010 9.850 -5.976 1.00289.65 C ATOM 292 O THR 36 -0.400 9.645 -4.928 1.00289.65 O ATOM 293 N LYS 37 -1.698 8.888 -6.624 1.00321.12 N ATOM 294 CA LYS 37 -1.760 7.524 -6.181 1.00321.12 C ATOM 295 CB LYS 37 -3.162 6.902 -6.308 1.00321.12 C ATOM 296 CG LYS 37 -3.741 6.974 -7.725 1.00321.12 C ATOM 297 CD LYS 37 -3.968 8.400 -8.237 1.00321.12 C ATOM 298 CE LYS 37 -4.583 8.454 -9.638 1.00321.12 C ATOM 299 NZ LYS 37 -4.828 9.857 -10.042 1.00321.12 N ATOM 300 C LYS 37 -0.843 6.734 -7.052 1.00321.12 C ATOM 301 O LYS 37 -0.529 7.141 -8.169 1.00321.12 O ATOM 302 N TYR 38 -0.365 5.583 -6.540 1.00336.42 N ATOM 303 CA TYR 38 0.519 4.754 -7.303 1.00336.42 C ATOM 304 CB TYR 38 1.954 4.732 -6.756 1.00336.42 C ATOM 305 CG TYR 38 2.478 6.123 -6.857 1.00336.42 C ATOM 306 CD1 TYR 38 2.175 7.047 -5.886 1.00336.42 C ATOM 307 CD2 TYR 38 3.262 6.506 -7.922 1.00336.42 C ATOM 308 CE1 TYR 38 2.655 8.334 -5.963 1.00336.42 C ATOM 309 CE2 TYR 38 3.746 7.791 -8.005 1.00336.42 C ATOM 310 CZ TYR 38 3.439 8.708 -7.027 1.00336.42 C ATOM 311 OH TYR 38 3.933 10.027 -7.107 1.00336.42 O ATOM 312 C TYR 38 -0.018 3.363 -7.244 1.00336.42 C ATOM 313 O TYR 38 -0.658 2.976 -6.268 1.00336.42 O ATOM 314 N THR 39 0.227 2.573 -8.309 1.00222.01 N ATOM 315 CA THR 39 -0.296 1.240 -8.360 1.00222.01 C ATOM 316 CB THR 39 -1.081 0.945 -9.604 1.00222.01 C ATOM 317 OG1 THR 39 -2.183 1.832 -9.712 1.00222.01 O ATOM 318 CG2 THR 39 -1.575 -0.511 -9.534 1.00222.01 C ATOM 319 C THR 39 0.845 0.284 -8.356 1.00222.01 C ATOM 320 O THR 39 1.926 0.576 -8.867 1.00222.01 O ATOM 321 N LEU 40 0.620 -0.884 -7.729 1.00110.86 N ATOM 322 CA LEU 40 1.609 -1.916 -7.691 1.00110.86 C ATOM 323 CB LEU 40 1.856 -2.485 -6.284 1.00110.86 C ATOM 324 CG LEU 40 2.501 -1.473 -5.320 1.00110.86 C ATOM 325 CD1 LEU 40 3.923 -1.112 -5.771 1.00110.86 C ATOM 326 CD2 LEU 40 1.602 -0.243 -5.115 1.00110.86 C ATOM 327 C LEU 40 1.093 -3.023 -8.545 1.00110.86 C ATOM 328 O LEU 40 -0.078 -3.393 -8.467 1.00110.86 O ATOM 329 N CYS 41 1.963 -3.564 -9.414 1.00 16.25 N ATOM 330 CA CYS 41 1.542 -4.639 -10.258 1.00 16.25 C ATOM 331 CB CYS 41 2.134 -4.575 -11.676 1.00 16.25 C ATOM 332 SG CYS 41 1.560 -3.120 -12.603 1.00 16.25 S ATOM 333 C CYS 41 2.058 -5.916 -9.616 1.00 16.25 C ATOM 334 O CYS 41 1.682 -6.181 -8.443 1.00 16.25 O ATOM 335 OXT CYS 41 2.839 -6.638 -10.290 1.00 16.25 O TER END