####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS124_1 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS124_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 4.13 4.13 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 17 - 41 1.65 6.82 LCS_AVERAGE: 56.22 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 2 - 16 0.87 6.49 LONGEST_CONTINUOUS_SEGMENT: 15 3 - 17 0.97 5.96 LCS_AVERAGE: 24.27 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 20 41 3 3 3 4 23 24 25 27 30 31 34 36 38 40 40 41 41 41 41 41 LCS_GDT Q 2 Q 2 15 20 41 5 13 16 19 22 24 25 27 29 31 33 33 36 38 40 41 41 41 41 41 LCS_GDT E 3 E 3 15 20 41 12 13 16 20 23 24 25 27 30 31 33 35 37 40 40 41 41 41 41 41 LCS_GDT T 4 T 4 15 20 41 12 13 16 20 23 24 25 27 30 31 34 36 38 40 40 41 41 41 41 41 LCS_GDT R 5 R 5 15 20 41 12 13 16 20 23 24 25 27 30 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT K 6 K 6 15 20 41 12 13 16 20 23 24 25 27 30 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT K 7 K 7 15 20 41 12 13 16 20 23 24 25 27 30 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT C 8 C 8 15 20 41 12 13 16 20 23 24 25 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT T 9 T 9 15 20 41 12 13 16 20 23 24 25 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT E 10 E 10 15 20 41 12 13 16 20 23 24 25 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT M 11 M 11 15 20 41 12 13 16 20 23 24 28 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT K 12 K 12 15 20 41 12 13 16 20 23 24 28 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT K 13 K 13 15 20 41 12 13 16 20 23 24 28 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT K 14 K 14 15 20 41 12 13 16 20 23 24 28 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT F 15 F 15 15 20 41 4 13 16 20 23 24 28 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT K 16 K 16 15 20 41 3 4 14 20 23 24 28 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT N 17 N 17 15 25 41 3 8 16 21 24 25 28 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT C 18 C 18 7 25 41 6 12 16 21 24 25 28 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT E 19 E 19 7 25 41 6 12 16 21 24 25 28 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT V 20 V 20 7 25 41 5 12 15 21 24 25 28 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT R 21 R 21 7 25 41 5 12 15 21 24 25 28 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT C 22 C 22 7 25 41 4 12 15 21 24 25 27 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT D 23 D 23 7 25 41 5 12 15 21 24 25 26 30 31 33 34 37 37 40 40 41 41 41 41 41 LCS_GDT E 24 E 24 7 25 41 3 7 15 21 24 25 28 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT S 25 S 25 4 25 41 3 4 15 21 24 25 28 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT N 26 N 26 7 25 41 3 4 7 17 22 25 28 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT H 27 H 27 8 25 41 3 10 15 21 24 25 28 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT C 28 C 28 8 25 41 6 12 15 21 24 25 28 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT V 29 V 29 8 25 41 6 12 15 21 24 25 28 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT E 30 E 30 8 25 41 6 12 15 21 24 25 28 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT V 31 V 31 8 25 41 6 12 15 21 24 25 28 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT R 32 R 32 8 25 41 5 12 15 21 24 25 28 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT C 33 C 33 8 25 41 3 10 15 21 24 25 28 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT S 34 S 34 8 25 41 3 12 15 21 24 25 28 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT D 35 D 35 5 25 41 3 4 9 20 24 25 25 25 28 31 34 37 38 40 40 41 41 41 41 41 LCS_GDT T 36 T 36 6 25 41 4 6 14 21 24 25 28 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT K 37 K 37 6 25 41 4 6 7 21 24 25 28 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT Y 38 Y 38 6 25 41 4 6 11 21 24 25 28 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT T 39 T 39 6 25 41 4 6 15 21 24 25 28 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT L 40 L 40 6 25 41 4 6 15 21 24 25 28 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_GDT C 41 C 41 6 25 41 4 6 15 21 24 25 28 30 32 33 35 37 38 40 40 41 41 41 41 41 LCS_AVERAGE LCS_A: 60.16 ( 24.27 56.22 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 12 13 16 21 24 25 28 30 32 33 35 37 38 40 40 41 41 41 41 41 GDT PERCENT_AT 29.27 31.71 39.02 51.22 58.54 60.98 68.29 73.17 78.05 80.49 85.37 90.24 92.68 97.56 97.56 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.34 0.44 1.04 1.39 1.55 1.65 2.64 2.69 2.98 3.04 3.37 3.54 3.75 3.97 3.97 4.13 4.13 4.13 4.13 4.13 GDT RMS_ALL_AT 6.91 6.78 6.08 6.82 6.87 6.82 4.96 5.18 4.61 4.72 4.27 4.37 4.16 4.15 4.15 4.13 4.13 4.13 4.13 4.13 # Checking swapping # possible swapping detected: E 10 E 10 # possible swapping detected: F 15 F 15 # possible swapping detected: E 19 E 19 # possible swapping detected: D 23 D 23 # possible swapping detected: E 24 E 24 # possible swapping detected: E 30 E 30 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 11.423 0 0.449 0.586 12.443 0.000 0.000 12.189 LGA Q 2 Q 2 13.438 0 0.281 1.373 15.952 0.000 0.000 15.952 LGA E 3 E 3 11.406 0 0.066 1.202 17.605 0.000 0.000 16.117 LGA T 4 T 4 9.750 0 0.043 0.183 10.605 0.000 0.000 9.744 LGA R 5 R 5 8.942 0 0.054 1.293 18.062 0.000 0.000 18.062 LGA K 6 K 6 8.674 0 0.080 0.932 10.775 0.000 0.000 10.775 LGA K 7 K 7 7.455 0 0.043 0.580 8.973 0.000 0.000 8.973 LGA C 8 C 8 6.232 0 0.034 0.056 6.757 0.000 0.000 5.860 LGA T 9 T 9 5.708 0 0.039 1.038 7.945 0.000 0.000 7.945 LGA E 10 E 10 6.212 0 0.072 0.265 9.262 0.000 0.000 7.566 LGA M 11 M 11 4.419 0 0.099 1.140 5.169 6.818 25.909 0.552 LGA K 12 K 12 3.370 0 0.058 0.665 5.118 16.364 12.929 5.118 LGA K 13 K 13 4.196 0 0.059 0.649 6.047 6.818 3.232 5.183 LGA K 14 K 14 4.148 0 0.067 1.005 10.025 8.182 4.444 10.025 LGA F 15 F 15 3.013 0 0.448 0.599 5.132 11.818 25.620 2.621 LGA K 16 K 16 3.561 0 0.452 1.124 8.386 31.818 14.141 8.386 LGA N 17 N 17 1.354 0 0.597 1.108 5.259 61.818 37.955 2.562 LGA C 18 C 18 2.104 0 0.074 0.862 5.394 44.545 36.061 5.394 LGA E 19 E 19 2.236 0 0.274 0.310 2.794 41.364 34.747 2.794 LGA V 20 V 20 2.737 0 0.071 1.175 5.982 27.273 18.961 4.201 LGA R 21 R 21 2.190 0 0.078 1.002 5.073 38.182 25.124 4.412 LGA C 22 C 22 2.805 0 0.118 0.824 4.874 27.273 23.030 4.874 LGA D 23 D 23 3.362 0 0.583 0.674 5.852 11.818 21.591 1.819 LGA E 24 E 24 1.792 0 0.229 0.856 2.608 45.000 51.919 1.525 LGA S 25 S 25 1.059 0 0.501 0.492 3.082 65.909 53.333 3.082 LGA N 26 N 26 3.028 0 0.442 1.009 9.643 36.364 18.182 7.738 LGA H 27 H 27 1.434 0 0.140 1.118 2.356 51.364 58.000 2.014 LGA C 28 C 28 2.470 0 0.044 0.771 3.600 38.182 31.818 3.600 LGA V 29 V 29 2.171 0 0.076 0.094 2.491 38.182 38.182 2.242 LGA E 30 E 30 2.177 0 0.087 0.685 4.584 38.182 25.859 4.584 LGA V 31 V 31 2.022 0 0.029 0.089 2.275 47.727 43.636 2.144 LGA R 32 R 32 1.648 0 0.241 1.263 5.249 47.727 39.174 5.249 LGA C 33 C 33 1.763 0 0.516 0.603 2.661 51.364 45.152 2.661 LGA S 34 S 34 3.346 0 0.106 0.117 4.231 14.091 11.212 4.115 LGA D 35 D 35 5.333 0 0.624 0.835 7.386 0.455 0.227 7.322 LGA T 36 T 36 2.603 0 0.292 1.056 3.139 39.545 34.545 3.139 LGA K 37 K 37 2.841 0 0.000 1.725 5.212 17.273 14.949 5.212 LGA Y 38 Y 38 3.252 0 0.047 1.234 6.946 33.636 17.727 6.946 LGA T 39 T 39 2.335 0 0.180 1.080 4.099 28.636 22.597 4.099 LGA L 40 L 40 1.517 0 0.181 0.989 5.086 70.000 40.455 5.086 LGA C 41 C 41 1.024 0 0.529 1.375 3.852 61.818 44.935 3.852 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 4.130 4.098 4.781 25.843 21.357 11.973 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 30 2.69 64.024 64.172 1.076 LGA_LOCAL RMSD: 2.687 Number of atoms: 30 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.185 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 4.130 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.775590 * X + -0.166577 * Y + -0.608862 * Z + 251.154709 Y_new = 0.155004 * X + -0.985279 * Y + 0.072110 * Z + 64.221008 Z_new = -0.611910 * X + -0.038448 * Y + 0.789992 * Z + 181.016678 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.944338 0.658473 -0.048631 [DEG: 168.6982 37.7278 -2.7863 ] ZXZ: -1.688681 0.660000 -1.633547 [DEG: -96.7543 37.8152 -93.5953 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS124_1 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS124_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 30 2.69 64.172 4.13 REMARK ---------------------------------------------------------- MOLECULE T0955TS124_1 PFRMAT TS TARGET T0955 MODEL 1 PARENT N/A ATOM 1 N SER 1 9.984 -11.242 2.488 1.00 1.48 N ATOM 2 CA SER 1 9.543 -11.357 3.898 1.00 1.48 C ATOM 3 CB SER 1 10.141 -12.611 4.555 1.00 1.48 C ATOM 4 OG SER 1 9.563 -13.768 3.974 1.00 1.48 O ATOM 5 C SER 1 9.967 -10.162 4.678 1.00 1.48 C ATOM 6 O SER 1 9.261 -9.154 4.726 1.00 1.48 O ATOM 7 N GLN 2 11.141 -10.240 5.324 1.00 1.96 N ATOM 8 CA GLN 2 11.546 -9.106 6.091 1.00 1.96 C ATOM 9 CB GLN 2 12.856 -9.309 6.872 1.00 1.96 C ATOM 10 CG GLN 2 12.691 -10.110 8.162 1.00 1.96 C ATOM 11 CD GLN 2 12.849 -11.594 7.874 1.00 1.96 C ATOM 12 OE1 GLN 2 13.218 -11.998 6.773 1.00 1.96 O ATOM 13 NE2 GLN 2 12.597 -12.428 8.917 1.00 1.96 N ATOM 14 C GLN 2 11.760 -7.936 5.190 1.00 1.96 C ATOM 15 O GLN 2 11.287 -6.835 5.464 1.00 1.96 O ATOM 16 N GLU 3 12.459 -8.139 4.064 1.00 1.23 N ATOM 17 CA GLU 3 12.775 -7.003 3.252 1.00 1.23 C ATOM 18 CB GLU 3 13.784 -7.310 2.135 1.00 1.23 C ATOM 19 CG GLU 3 15.164 -7.633 2.705 1.00 1.23 C ATOM 20 CD GLU 3 16.094 -7.910 1.540 1.00 1.23 C ATOM 21 OE1 GLU 3 16.664 -6.928 0.992 1.00 1.23 O ATOM 22 OE2 GLU 3 16.249 -9.105 1.179 1.00 1.23 O ATOM 23 C GLU 3 11.549 -6.420 2.636 1.00 1.23 C ATOM 24 O GLU 3 11.412 -5.201 2.571 1.00 1.23 O ATOM 25 N THR 4 10.622 -7.260 2.155 1.00 1.94 N ATOM 26 CA THR 4 9.475 -6.710 1.500 1.00 1.94 C ATOM 27 CB THR 4 8.629 -7.750 0.824 1.00 1.94 C ATOM 28 OG1 THR 4 7.649 -7.132 0.004 1.00 1.94 O ATOM 29 CG2 THR 4 7.950 -8.628 1.889 1.00 1.94 C ATOM 30 C THR 4 8.629 -5.947 2.474 1.00 1.94 C ATOM 31 O THR 4 8.163 -4.855 2.157 1.00 1.94 O ATOM 32 N ARG 5 8.409 -6.497 3.686 1.00 2.14 N ATOM 33 CA ARG 5 7.548 -5.871 4.653 1.00 2.14 C ATOM 34 CB ARG 5 7.370 -6.720 5.928 1.00 2.14 C ATOM 35 CG ARG 5 6.455 -6.080 6.979 1.00 2.14 C ATOM 36 CD ARG 5 6.275 -6.937 8.238 1.00 2.14 C ATOM 37 NE ARG 5 7.592 -7.028 8.930 1.00 2.14 N ATOM 38 CZ ARG 5 7.794 -7.934 9.933 1.00 2.14 C ATOM 39 NH1 ARG 5 6.779 -8.742 10.361 1.00 2.14 N ATOM 40 NH2 ARG 5 9.022 -8.019 10.521 1.00 2.14 N ATOM 41 C ARG 5 8.122 -4.553 5.058 1.00 2.14 C ATOM 42 O ARG 5 7.412 -3.552 5.135 1.00 2.14 O ATOM 43 N LYS 6 9.432 -4.513 5.341 1.00 1.59 N ATOM 44 CA LYS 6 10.051 -3.287 5.745 1.00 1.59 C ATOM 45 CB LYS 6 11.489 -3.460 6.256 1.00 1.59 C ATOM 46 CG LYS 6 11.541 -4.097 7.645 1.00 1.59 C ATOM 47 CD LYS 6 12.953 -4.402 8.141 1.00 1.59 C ATOM 48 CE LYS 6 13.671 -3.174 8.698 1.00 1.59 C ATOM 49 NZ LYS 6 15.026 -3.553 9.154 1.00 1.59 N ATOM 50 C LYS 6 10.064 -2.342 4.588 1.00 1.59 C ATOM 51 O LYS 6 9.948 -1.134 4.759 1.00 1.59 O ATOM 52 N LYS 7 10.190 -2.871 3.362 1.00 2.12 N ATOM 53 CA LYS 7 10.287 -2.032 2.204 1.00 2.12 C ATOM 54 CB LYS 7 10.338 -2.835 0.882 1.00 2.12 C ATOM 55 CG LYS 7 10.478 -1.964 -0.374 1.00 2.12 C ATOM 56 CD LYS 7 10.773 -2.742 -1.667 1.00 2.12 C ATOM 57 CE LYS 7 12.221 -2.639 -2.154 1.00 2.12 C ATOM 58 NZ LYS 7 13.106 -3.443 -1.288 1.00 2.12 N ATOM 59 C LYS 7 9.066 -1.179 2.136 1.00 2.12 C ATOM 60 O LYS 7 9.154 0.007 1.831 1.00 2.12 O ATOM 61 N CYS 8 7.887 -1.770 2.390 1.00 1.75 N ATOM 62 CA CYS 8 6.648 -1.056 2.314 1.00 1.75 C ATOM 63 CB CYS 8 5.440 -2.000 2.454 1.00 1.75 C ATOM 64 SG CYS 8 3.847 -1.131 2.351 1.00 1.75 S ATOM 65 C CYS 8 6.581 -0.019 3.398 1.00 1.75 C ATOM 66 O CYS 8 6.152 1.106 3.158 1.00 1.75 O ATOM 67 N THR 9 7.021 -0.368 4.622 1.00 1.97 N ATOM 68 CA THR 9 6.882 0.514 5.745 1.00 1.97 C ATOM 69 CB THR 9 7.278 -0.119 7.049 1.00 1.97 C ATOM 70 OG1 THR 9 6.835 0.687 8.132 1.00 1.97 O ATOM 71 CG2 THR 9 8.808 -0.292 7.103 1.00 1.97 C ATOM 72 C THR 9 7.705 1.743 5.545 1.00 1.97 C ATOM 73 O THR 9 7.278 2.844 5.881 1.00 1.97 O ATOM 74 N GLU 10 8.921 1.590 5.004 1.00 1.62 N ATOM 75 CA GLU 10 9.784 2.712 4.794 1.00 1.62 C ATOM 76 CB GLU 10 11.146 2.258 4.252 1.00 1.62 C ATOM 77 CG GLU 10 12.248 3.307 4.363 1.00 1.62 C ATOM 78 CD GLU 10 13.541 2.649 3.900 1.00 1.62 C ATOM 79 OE1 GLU 10 13.665 2.390 2.675 1.00 1.62 O ATOM 80 OE2 GLU 10 14.419 2.384 4.763 1.00 1.62 O ATOM 81 C GLU 10 9.132 3.593 3.776 1.00 1.62 C ATOM 82 O GLU 10 9.147 4.817 3.885 1.00 1.62 O ATOM 83 N MET 11 8.521 2.954 2.766 1.00 2.21 N ATOM 84 CA MET 11 7.812 3.555 1.675 1.00 2.21 C ATOM 85 CB MET 11 7.189 2.445 0.817 1.00 2.21 C ATOM 86 CG MET 11 6.276 2.876 -0.324 1.00 2.21 C ATOM 87 SD MET 11 5.185 1.511 -0.816 1.00 2.21 S ATOM 88 CE MET 11 6.548 0.311 -0.892 1.00 2.21 C ATOM 89 C MET 11 6.687 4.335 2.272 1.00 2.21 C ATOM 90 O MET 11 6.415 5.465 1.885 1.00 2.21 O ATOM 91 N LYS 12 6.002 3.731 3.253 1.00 1.98 N ATOM 92 CA LYS 12 4.898 4.351 3.916 1.00 1.98 C ATOM 93 CB LYS 12 4.259 3.376 4.922 1.00 1.98 C ATOM 94 CG LYS 12 2.988 3.884 5.596 1.00 1.98 C ATOM 95 CD LYS 12 2.181 2.773 6.273 1.00 1.98 C ATOM 96 CE LYS 12 1.002 3.276 7.107 1.00 1.98 C ATOM 97 NZ LYS 12 1.497 3.860 8.372 1.00 1.98 N ATOM 98 C LYS 12 5.412 5.536 4.669 1.00 1.98 C ATOM 99 O LYS 12 4.793 6.596 4.709 1.00 1.98 O ATOM 100 N LYS 13 6.573 5.377 5.312 1.00 1.37 N ATOM 101 CA LYS 13 7.134 6.429 6.098 1.00 1.37 C ATOM 102 CB LYS 13 8.363 5.945 6.881 1.00 1.37 C ATOM 103 CG LYS 13 8.016 4.936 7.980 1.00 1.37 C ATOM 104 CD LYS 13 9.173 4.035 8.416 1.00 1.37 C ATOM 105 CE LYS 13 8.787 3.150 9.601 1.00 1.37 C ATOM 106 NZ LYS 13 9.474 1.843 9.524 1.00 1.37 N ATOM 107 C LYS 13 7.539 7.563 5.213 1.00 1.37 C ATOM 108 O LYS 13 7.321 8.727 5.545 1.00 1.37 O ATOM 109 N LYS 14 8.151 7.260 4.056 1.00 2.03 N ATOM 110 CA LYS 14 8.609 8.310 3.194 1.00 2.03 C ATOM 111 CB LYS 14 9.376 7.799 1.960 1.00 2.03 C ATOM 112 CG LYS 14 10.678 7.046 2.269 1.00 2.03 C ATOM 113 CD LYS 14 11.738 7.871 3.007 1.00 2.03 C ATOM 114 CE LYS 14 12.806 8.499 2.104 1.00 2.03 C ATOM 115 NZ LYS 14 13.776 9.280 2.915 1.00 2.03 N ATOM 116 C LYS 14 7.426 9.071 2.685 1.00 2.03 C ATOM 117 O LYS 14 7.438 10.298 2.627 1.00 2.03 O ATOM 118 N PHE 15 6.349 8.367 2.302 1.00 2.14 N ATOM 119 CA PHE 15 5.259 9.093 1.730 1.00 2.14 C ATOM 120 CB PHE 15 4.174 8.247 1.042 1.00 2.14 C ATOM 121 CG PHE 15 4.890 7.714 -0.148 1.00 2.14 C ATOM 122 CD1 PHE 15 5.429 8.597 -1.052 1.00 2.14 C ATOM 123 CD2 PHE 15 5.093 6.367 -0.333 1.00 2.14 C ATOM 124 CE1 PHE 15 6.125 8.144 -2.147 1.00 2.14 C ATOM 125 CE2 PHE 15 5.788 5.905 -1.429 1.00 2.14 C ATOM 126 CZ PHE 15 6.298 6.795 -2.342 1.00 2.14 C ATOM 127 C PHE 15 4.645 9.979 2.739 1.00 2.14 C ATOM 128 O PHE 15 4.280 11.097 2.390 1.00 2.14 O ATOM 129 N LYS 16 4.512 9.486 3.990 1.00 2.18 N ATOM 130 CA LYS 16 3.926 10.203 5.090 1.00 2.18 C ATOM 131 CB LYS 16 3.975 11.743 4.982 1.00 2.18 C ATOM 132 CG LYS 16 3.347 12.535 6.123 1.00 2.18 C ATOM 133 CD LYS 16 3.629 14.033 5.980 1.00 2.18 C ATOM 134 CE LYS 16 2.795 14.909 6.912 1.00 2.18 C ATOM 135 NZ LYS 16 2.836 16.310 6.442 1.00 2.18 N ATOM 136 C LYS 16 2.511 9.752 5.176 1.00 2.18 C ATOM 137 O LYS 16 2.215 8.646 5.626 1.00 2.18 O ATOM 138 N ASN 17 1.582 10.617 4.746 1.00 1.63 N ATOM 139 CA ASN 17 0.222 10.211 4.826 1.00 1.63 C ATOM 140 CB ASN 17 -0.740 11.407 4.820 1.00 1.63 C ATOM 141 CG ASN 17 -0.306 12.338 5.946 1.00 1.63 C ATOM 142 OD1 ASN 17 0.346 13.351 5.699 1.00 1.63 O ATOM 143 ND2 ASN 17 -0.663 11.998 7.214 1.00 1.63 N ATOM 144 C ASN 17 -0.048 9.390 3.611 1.00 1.63 C ATOM 145 O ASN 17 -0.202 9.907 2.506 1.00 1.63 O ATOM 146 N CYS 18 -0.083 8.061 3.785 1.00 1.79 N ATOM 147 CA CYS 18 -0.396 7.241 2.665 1.00 1.79 C ATOM 148 CB CYS 18 0.802 6.449 2.110 1.00 1.79 C ATOM 149 SG CYS 18 1.501 5.282 3.306 1.00 1.79 S ATOM 150 C CYS 18 -1.471 6.313 3.117 1.00 1.79 C ATOM 151 O CYS 18 -1.492 5.870 4.266 1.00 1.79 O ATOM 152 N GLU 19 -2.427 6.038 2.215 1.00 1.82 N ATOM 153 CA GLU 19 -3.517 5.176 2.549 1.00 1.82 C ATOM 154 CB GLU 19 -4.901 5.684 2.095 1.00 1.82 C ATOM 155 CG GLU 19 -6.031 4.674 2.347 1.00 1.82 C ATOM 156 CD GLU 19 -7.323 5.208 1.744 1.00 1.82 C ATOM 157 OE1 GLU 19 -7.513 6.452 1.778 1.00 1.82 O ATOM 158 OE2 GLU 19 -8.131 4.381 1.239 1.00 1.82 O ATOM 159 C GLU 19 -3.311 3.897 1.823 1.00 1.82 C ATOM 160 O GLU 19 -2.895 3.875 0.665 1.00 1.82 O ATOM 161 N VAL 20 -3.595 2.784 2.514 1.00 1.95 N ATOM 162 CA VAL 20 -3.485 1.497 1.903 1.00 1.95 C ATOM 163 CB VAL 20 -2.702 0.538 2.746 1.00 1.95 C ATOM 164 CG1 VAL 20 -3.295 0.550 4.169 1.00 1.95 C ATOM 165 CG2 VAL 20 -2.744 -0.840 2.068 1.00 1.95 C ATOM 166 C VAL 20 -4.877 0.954 1.773 1.00 1.95 C ATOM 167 O VAL 20 -5.633 0.904 2.743 1.00 1.95 O ATOM 168 N ARG 21 -5.261 0.547 0.550 1.00 2.17 N ATOM 169 CA ARG 21 -6.559 -0.018 0.302 1.00 2.17 C ATOM 170 CB ARG 21 -7.401 0.878 -0.637 1.00 2.17 C ATOM 171 CG ARG 21 -8.811 0.387 -0.985 1.00 2.17 C ATOM 172 CD ARG 21 -9.568 1.319 -1.946 1.00 2.17 C ATOM 173 NE ARG 21 -9.780 2.630 -1.269 1.00 2.17 N ATOM 174 CZ ARG 21 -10.946 2.886 -0.598 1.00 2.17 C ATOM 175 NH1 ARG 21 -11.928 1.941 -0.535 1.00 2.17 N ATOM 176 NH2 ARG 21 -11.125 4.097 0.004 1.00 2.17 N ATOM 177 C ARG 21 -6.284 -1.319 -0.391 1.00 2.17 C ATOM 178 O ARG 21 -5.577 -1.352 -1.395 1.00 2.17 O ATOM 179 N CYS 22 -6.813 -2.440 0.143 1.00 1.77 N ATOM 180 CA CYS 22 -6.521 -3.699 -0.481 1.00 1.77 C ATOM 181 CB CYS 22 -5.987 -4.755 0.497 1.00 1.77 C ATOM 182 SG CYS 22 -7.155 -5.092 1.847 1.00 1.77 S ATOM 183 C CYS 22 -7.770 -4.226 -1.107 1.00 1.77 C ATOM 184 O CYS 22 -8.779 -4.456 -0.444 1.00 1.77 O ATOM 185 N ASP 23 -7.719 -4.396 -2.437 1.00 1.43 N ATOM 186 CA ASP 23 -8.801 -4.887 -3.236 1.00 1.43 C ATOM 187 CB ASP 23 -8.478 -4.732 -4.729 1.00 1.43 C ATOM 188 CG ASP 23 -8.192 -3.254 -4.993 1.00 1.43 C ATOM 189 OD1 ASP 23 -8.958 -2.393 -4.483 1.00 1.43 O ATOM 190 OD2 ASP 23 -7.200 -2.971 -5.714 1.00 1.43 O ATOM 191 C ASP 23 -9.004 -6.344 -2.944 1.00 1.43 C ATOM 192 O ASP 23 -10.131 -6.834 -2.916 1.00 1.43 O ATOM 193 N GLU 24 -7.897 -7.081 -2.727 1.00 1.97 N ATOM 194 CA GLU 24 -7.956 -8.495 -2.507 1.00 1.97 C ATOM 195 CB GLU 24 -8.854 -8.889 -1.318 1.00 1.97 C ATOM 196 CG GLU 24 -8.850 -10.391 -1.025 1.00 1.97 C ATOM 197 CD GLU 24 -9.791 -10.652 0.139 1.00 1.97 C ATOM 198 OE1 GLU 24 -10.940 -10.136 0.092 1.00 1.97 O ATOM 199 OE2 GLU 24 -9.372 -11.364 1.089 1.00 1.97 O ATOM 200 C GLU 24 -8.508 -9.103 -3.752 1.00 1.97 C ATOM 201 O GLU 24 -8.954 -10.242 -3.779 1.00 1.97 O ATOM 202 N SER 25 -8.418 -8.356 -4.864 1.00 2.12 N ATOM 203 CA SER 25 -8.842 -8.877 -6.125 1.00 2.12 C ATOM 204 CB SER 25 -8.965 -7.805 -7.220 1.00 2.12 C ATOM 205 OG SER 25 -9.907 -6.814 -6.835 1.00 2.12 O ATOM 206 C SER 25 -7.727 -9.772 -6.521 1.00 2.12 C ATOM 207 O SER 25 -7.162 -10.476 -5.685 1.00 2.12 O ATOM 208 N ASN 26 -7.418 -9.822 -7.824 1.00 2.57 N ATOM 209 CA ASN 26 -6.310 -10.635 -8.216 1.00 2.57 C ATOM 210 CB ASN 26 -6.309 -10.957 -9.724 1.00 2.57 C ATOM 211 CG ASN 26 -5.164 -11.914 -10.024 1.00 2.57 C ATOM 212 OD1 ASN 26 -4.088 -11.500 -10.449 1.00 2.57 O ATOM 213 ND2 ASN 26 -5.399 -13.232 -9.781 1.00 2.57 N ATOM 214 C ASN 26 -5.078 -9.851 -7.884 1.00 2.57 C ATOM 215 O ASN 26 -4.340 -9.405 -8.762 1.00 2.57 O ATOM 216 N HIS 27 -4.836 -9.715 -6.564 1.00 2.16 N ATOM 217 CA HIS 27 -3.719 -9.065 -5.942 1.00 2.16 C ATOM 218 ND1 HIS 27 -2.846 -12.361 -5.457 1.00 2.16 N ATOM 219 CG HIS 27 -2.548 -11.080 -5.053 1.00 2.16 C ATOM 220 CB HIS 27 -2.432 -9.903 -5.973 1.00 2.16 C ATOM 221 NE2 HIS 27 -2.669 -12.427 -3.245 1.00 2.16 N ATOM 222 CD2 HIS 27 -2.440 -11.141 -3.695 1.00 2.16 C ATOM 223 CE1 HIS 27 -2.909 -13.126 -4.341 1.00 2.16 C ATOM 224 C HIS 27 -3.446 -7.669 -6.430 1.00 2.16 C ATOM 225 O HIS 27 -2.364 -7.391 -6.947 1.00 2.16 O ATOM 226 N CYS 28 -4.405 -6.731 -6.292 1.00 1.71 N ATOM 227 CA CYS 28 -4.066 -5.374 -6.637 1.00 1.71 C ATOM 228 CB CYS 28 -5.034 -4.692 -7.623 1.00 1.71 C ATOM 229 SG CYS 28 -4.522 -2.995 -8.046 1.00 1.71 S ATOM 230 C CYS 28 -4.114 -4.575 -5.364 1.00 1.71 C ATOM 231 O CYS 28 -5.085 -4.634 -4.612 1.00 1.71 O ATOM 232 N VAL 29 -3.053 -3.798 -5.082 1.00 1.25 N ATOM 233 CA VAL 29 -3.032 -3.024 -3.876 1.00 1.25 C ATOM 234 CB VAL 29 -1.758 -3.215 -3.109 1.00 1.25 C ATOM 235 CG1 VAL 29 -1.787 -2.316 -1.863 1.00 1.25 C ATOM 236 CG2 VAL 29 -1.607 -4.713 -2.797 1.00 1.25 C ATOM 237 C VAL 29 -3.120 -1.586 -4.277 1.00 1.25 C ATOM 238 O VAL 29 -2.330 -1.120 -5.093 1.00 1.25 O ATOM 239 N GLU 30 -4.085 -0.832 -3.712 1.00 1.35 N ATOM 240 CA GLU 30 -4.219 0.537 -4.113 1.00 1.35 C ATOM 241 CB GLU 30 -5.676 0.938 -4.384 1.00 1.35 C ATOM 242 CG GLU 30 -6.234 0.290 -5.649 1.00 1.35 C ATOM 243 CD GLU 30 -7.676 0.738 -5.843 1.00 1.35 C ATOM 244 OE1 GLU 30 -8.538 0.330 -5.021 1.00 1.35 O ATOM 245 OE2 GLU 30 -7.932 1.501 -6.812 1.00 1.35 O ATOM 246 C GLU 30 -3.692 1.426 -3.036 1.00 1.35 C ATOM 247 O GLU 30 -4.101 1.350 -1.879 1.00 1.35 O ATOM 248 N VAL 31 -2.758 2.318 -3.396 1.00 1.17 N ATOM 249 CA VAL 31 -2.238 3.197 -2.398 1.00 1.17 C ATOM 250 CB VAL 31 -0.757 3.065 -2.233 1.00 1.17 C ATOM 251 CG1 VAL 31 -0.269 4.125 -1.229 1.00 1.17 C ATOM 252 CG2 VAL 31 -0.448 1.616 -1.827 1.00 1.17 C ATOM 253 C VAL 31 -2.511 4.594 -2.842 1.00 1.17 C ATOM 254 O VAL 31 -2.335 4.940 -4.008 1.00 1.17 O ATOM 255 N ARG 32 -2.975 5.442 -1.912 1.00 2.13 N ATOM 256 CA ARG 32 -3.199 6.813 -2.256 1.00 2.13 C ATOM 257 CB ARG 32 -4.563 7.369 -1.804 1.00 2.13 C ATOM 258 CG ARG 32 -5.749 6.818 -2.600 1.00 2.13 C ATOM 259 CD ARG 32 -6.228 7.751 -3.715 1.00 2.13 C ATOM 260 NE ARG 32 -7.031 8.839 -3.086 1.00 2.13 N ATOM 261 CZ ARG 32 -7.475 9.889 -3.834 1.00 2.13 C ATOM 262 NH1 ARG 32 -7.219 9.941 -5.173 1.00 2.13 N ATOM 263 NH2 ARG 32 -8.199 10.882 -3.237 1.00 2.13 N ATOM 264 C ARG 32 -2.153 7.570 -1.521 1.00 2.13 C ATOM 265 O ARG 32 -1.924 7.337 -0.335 1.00 2.13 O ATOM 266 N CYS 33 -1.469 8.493 -2.216 1.00 1.19 N ATOM 267 CA CYS 33 -0.423 9.223 -1.574 1.00 1.19 C ATOM 268 CB CYS 33 0.938 9.010 -2.250 1.00 1.19 C ATOM 269 SG CYS 33 1.456 7.266 -2.225 1.00 1.19 S ATOM 270 C CYS 33 -0.745 10.675 -1.666 1.00 1.19 C ATOM 271 O CYS 33 -1.208 11.174 -2.691 1.00 1.19 O ATOM 272 N SER 34 -0.489 11.398 -0.566 1.00 1.64 N ATOM 273 CA SER 34 -0.781 12.793 -0.515 1.00 1.64 C ATOM 274 CB SER 34 -0.427 13.390 0.855 1.00 1.64 C ATOM 275 OG SER 34 -1.202 12.762 1.865 1.00 1.64 O ATOM 276 C SER 34 0.043 13.463 -1.562 1.00 1.64 C ATOM 277 O SER 34 -0.458 14.303 -2.308 1.00 1.64 O ATOM 278 N ASP 35 1.335 13.089 -1.657 1.00 2.11 N ATOM 279 CA ASP 35 2.200 13.685 -2.630 1.00 2.11 C ATOM 280 CB ASP 35 3.122 14.768 -2.026 1.00 2.11 C ATOM 281 CG ASP 35 3.994 14.169 -0.933 1.00 2.11 C ATOM 282 OD1 ASP 35 3.586 13.151 -0.311 1.00 2.11 O ATOM 283 OD2 ASP 35 5.089 14.743 -0.698 1.00 2.11 O ATOM 284 C ASP 35 3.033 12.616 -3.264 1.00 2.11 C ATOM 285 O ASP 35 3.826 11.972 -2.584 1.00 2.11 O ATOM 286 N THR 36 2.799 12.371 -4.574 1.00 2.36 N ATOM 287 CA THR 36 3.517 11.457 -5.425 1.00 2.36 C ATOM 288 CB THR 36 4.731 10.763 -4.847 1.00 2.36 C ATOM 289 OG1 THR 36 5.515 10.215 -5.896 1.00 2.36 O ATOM 290 CG2 THR 36 4.285 9.629 -3.910 1.00 2.36 C ATOM 291 C THR 36 2.530 10.424 -5.851 1.00 2.36 C ATOM 292 O THR 36 1.321 10.598 -5.722 1.00 2.36 O ATOM 293 N LYS 37 3.042 9.327 -6.427 1.00 2.62 N ATOM 294 CA LYS 37 2.192 8.229 -6.759 1.00 2.62 C ATOM 295 CB LYS 37 1.786 8.157 -8.240 1.00 2.62 C ATOM 296 CG LYS 37 1.003 6.888 -8.589 1.00 2.62 C ATOM 297 CD LYS 37 -0.329 6.729 -7.851 1.00 2.62 C ATOM 298 CE LYS 37 -1.410 7.723 -8.275 1.00 2.62 C ATOM 299 NZ LYS 37 -1.252 8.984 -7.521 1.00 2.62 N ATOM 300 C LYS 37 2.980 7.007 -6.464 1.00 2.62 C ATOM 301 O LYS 37 4.007 6.758 -7.087 1.00 2.62 O ATOM 302 N TYR 38 2.538 6.200 -5.488 1.00 2.44 N ATOM 303 CA TYR 38 3.342 5.043 -5.277 1.00 2.44 C ATOM 304 CB TYR 38 4.131 5.037 -3.967 1.00 2.44 C ATOM 305 CG TYR 38 5.107 3.929 -4.147 1.00 2.44 C ATOM 306 CD1 TYR 38 6.280 4.143 -4.840 1.00 2.44 C ATOM 307 CD2 TYR 38 4.855 2.678 -3.643 1.00 2.44 C ATOM 308 CE1 TYR 38 7.186 3.125 -5.023 1.00 2.44 C ATOM 309 CE2 TYR 38 5.760 1.656 -3.824 1.00 2.44 C ATOM 310 CZ TYR 38 6.931 1.875 -4.508 1.00 2.44 C ATOM 311 OH TYR 38 7.856 0.823 -4.690 1.00 2.44 O ATOM 312 C TYR 38 2.454 3.852 -5.301 1.00 2.44 C ATOM 313 O TYR 38 1.333 3.886 -4.794 1.00 2.44 O ATOM 314 N THR 39 2.912 2.765 -5.942 1.00 2.07 N ATOM 315 CA THR 39 2.078 1.606 -5.946 1.00 2.07 C ATOM 316 CB THR 39 1.297 1.433 -7.212 1.00 2.07 C ATOM 317 OG1 THR 39 2.164 1.296 -8.327 1.00 2.07 O ATOM 318 CG2 THR 39 0.389 2.663 -7.384 1.00 2.07 C ATOM 319 C THR 39 2.928 0.397 -5.728 1.00 2.07 C ATOM 320 O THR 39 4.075 0.331 -6.164 1.00 2.07 O ATOM 321 N LEU 40 2.377 -0.590 -5.000 1.00 2.27 N ATOM 322 CA LEU 40 3.072 -1.824 -4.780 1.00 2.27 C ATOM 323 CB LEU 40 3.097 -2.327 -3.321 1.00 2.27 C ATOM 324 CG LEU 40 3.636 -3.770 -3.166 1.00 2.27 C ATOM 325 CD1 LEU 40 5.116 -3.870 -3.562 1.00 2.27 C ATOM 326 CD2 LEU 40 3.359 -4.343 -1.764 1.00 2.27 C ATOM 327 C LEU 40 2.321 -2.860 -5.531 1.00 2.27 C ATOM 328 O LEU 40 1.096 -2.820 -5.608 1.00 2.27 O ATOM 329 N CYS 41 3.060 -3.812 -6.125 1.00 1.54 N ATOM 330 CA CYS 41 2.442 -4.897 -6.820 1.00 1.54 C ATOM 331 CB CYS 41 3.313 -5.460 -7.958 1.00 1.54 C ATOM 332 SG CYS 41 2.559 -6.908 -8.764 1.00 1.54 S ATOM 333 C CYS 41 2.287 -6.014 -5.801 1.00 1.54 C ATOM 334 O CYS 41 3.278 -6.293 -5.071 1.00 1.54 O ATOM 335 OXT CYS 41 1.178 -6.609 -5.748 1.00 1.54 O TER 336 CYS 41 END