####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS274_1 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS274_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 1.51 1.51 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 1.51 1.51 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 35 7 - 41 1.00 1.73 LCS_AVERAGE: 79.48 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 41 41 3 3 4 23 26 36 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 20 41 41 8 13 23 30 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 20 41 41 8 13 23 30 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 20 41 41 10 17 28 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 20 41 41 10 21 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 28 41 41 10 20 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 35 41 41 10 20 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 35 41 41 10 27 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 35 41 41 10 27 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 35 41 41 10 26 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 35 41 41 10 27 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 35 41 41 10 27 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 35 41 41 10 27 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 35 41 41 10 27 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 35 41 41 10 27 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 35 41 41 4 17 31 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 35 41 41 10 27 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 35 41 41 10 27 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 35 41 41 10 27 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 35 41 41 4 25 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 35 41 41 5 25 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 35 41 41 3 4 30 35 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 35 41 41 3 5 30 35 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 35 41 41 5 27 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 35 41 41 9 27 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 35 41 41 8 27 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 35 41 41 10 27 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 35 41 41 10 27 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 35 41 41 9 27 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 35 41 41 9 27 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 35 41 41 10 27 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 35 41 41 10 27 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 35 41 41 8 27 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 35 41 41 10 27 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 35 41 41 7 27 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 35 41 41 6 13 31 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 35 41 41 10 27 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 35 41 41 4 27 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 35 41 41 3 27 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 35 41 41 3 27 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 35 41 41 4 27 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 93.16 ( 79.48 100.00 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 27 32 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 GDT PERCENT_AT 24.39 65.85 78.05 87.80 92.68 97.56 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.15 0.68 0.84 1.03 1.13 1.37 1.51 1.51 1.51 1.51 1.51 1.51 1.51 1.51 1.51 1.51 1.51 1.51 1.51 1.51 GDT RMS_ALL_AT 2.91 1.75 1.65 1.60 1.61 1.53 1.51 1.51 1.51 1.51 1.51 1.51 1.51 1.51 1.51 1.51 1.51 1.51 1.51 1.51 # Checking swapping # possible swapping detected: F 15 F 15 # possible swapping detected: E 19 E 19 # possible swapping detected: D 23 D 23 # possible swapping detected: E 24 E 24 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 4.125 0 0.599 0.595 5.731 5.909 3.939 5.731 LGA Q 2 Q 2 3.078 0 0.216 0.756 3.259 25.455 26.465 2.807 LGA E 3 E 3 3.095 0 0.065 1.031 6.769 22.727 11.313 6.769 LGA T 4 T 4 2.050 0 0.060 0.280 2.328 48.182 49.610 2.247 LGA R 5 R 5 0.865 0 0.061 0.193 1.586 82.273 67.603 1.586 LGA K 6 K 6 1.172 0 0.039 1.280 7.823 73.636 39.596 7.791 LGA K 7 K 7 1.331 0 0.044 0.670 4.068 65.455 40.606 4.068 LGA C 8 C 8 0.883 0 0.036 0.817 3.323 81.818 71.212 3.323 LGA T 9 T 9 0.357 0 0.040 0.106 0.970 95.455 89.610 0.665 LGA E 10 E 10 0.610 0 0.040 0.539 3.334 86.364 69.697 3.334 LGA M 11 M 11 0.979 0 0.091 0.853 2.946 73.636 70.909 2.946 LGA K 12 K 12 0.936 0 0.079 1.121 4.882 77.727 51.313 4.882 LGA K 13 K 13 0.417 0 0.041 0.661 4.031 90.909 64.444 4.031 LGA K 14 K 14 0.729 0 0.077 0.765 2.207 81.818 73.333 2.207 LGA F 15 F 15 1.046 0 0.183 0.290 1.958 65.455 68.926 1.796 LGA K 16 K 16 1.798 0 0.154 1.430 6.563 54.545 33.939 6.563 LGA N 17 N 17 0.673 0 0.094 1.037 2.479 74.091 69.318 2.124 LGA C 18 C 18 0.576 0 0.032 0.059 1.143 77.727 85.152 0.361 LGA E 19 E 19 1.163 0 0.314 0.621 3.569 73.636 51.111 2.442 LGA V 20 V 20 1.166 0 0.120 1.058 3.455 65.455 56.623 1.271 LGA R 21 R 21 1.341 0 0.070 1.295 6.052 61.818 34.545 6.052 LGA C 22 C 22 2.459 0 0.064 0.112 3.744 41.364 32.424 3.744 LGA D 23 D 23 2.543 0 0.260 1.044 5.410 21.818 17.955 3.265 LGA E 24 E 24 0.905 0 0.076 1.012 5.417 73.636 50.707 5.417 LGA S 25 S 25 1.428 0 0.067 0.652 3.496 61.818 50.606 3.496 LGA N 26 N 26 1.114 0 0.076 1.189 5.341 73.636 49.545 5.341 LGA H 27 H 27 0.538 0 0.055 0.118 1.245 81.818 78.727 1.106 LGA C 28 C 28 0.849 0 0.135 0.684 2.682 81.818 72.727 2.682 LGA V 29 V 29 1.135 0 0.127 0.136 1.661 61.818 63.377 1.394 LGA E 30 E 30 0.672 0 0.073 0.330 1.346 81.818 80.000 0.686 LGA V 31 V 31 0.407 0 0.031 0.092 0.813 95.455 89.610 0.527 LGA R 32 R 32 0.445 0 0.133 0.308 2.135 86.818 70.909 1.416 LGA C 33 C 33 0.368 0 0.503 0.517 2.238 80.000 86.667 0.204 LGA S 34 S 34 1.303 0 0.091 0.663 1.715 61.818 60.606 1.656 LGA D 35 D 35 1.912 0 0.079 0.475 2.761 41.818 48.182 1.815 LGA T 36 T 36 2.057 0 0.133 0.977 4.469 59.091 45.714 1.782 LGA K 37 K 37 0.738 0 0.097 1.268 4.166 77.727 57.172 4.166 LGA Y 38 Y 38 0.907 0 0.059 1.331 5.988 81.818 46.970 5.988 LGA T 39 T 39 1.527 0 0.114 0.118 2.194 54.545 49.351 2.009 LGA L 40 L 40 1.457 0 0.092 1.417 3.248 61.818 53.182 3.248 LGA C 41 C 41 1.103 0 0.074 0.149 1.554 65.455 65.714 1.083 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 1.515 1.529 2.310 66.585 56.083 34.634 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 41 1.51 88.415 94.181 2.539 LGA_LOCAL RMSD: 1.515 Number of atoms: 41 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 1.515 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 1.515 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.533997 * X + 0.411756 * Y + -0.738447 * Z + 11.312696 Y_new = -0.608612 * X + -0.419064 * Y + -0.673778 * Z + 80.929482 Z_new = -0.586888 * X + 0.809224 * Y + 0.026821 * Z + 33.157547 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.850608 0.627210 1.537665 [DEG: -48.7363 35.9365 88.1017 ] ZXZ: -0.831159 1.543972 -0.627471 [DEG: -47.6219 88.4631 -35.9515 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS274_1 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS274_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 41 1.51 94.181 1.51 REMARK ---------------------------------------------------------- MOLECULE T0955TS274_1 PFRMAT TS TARGET T0955 MODEL 1 PARENT N/A ATOM 1 N SER 1 -2.154 -14.096 1.306 1.00 70.52 N ATOM 2 CA SER 1 -2.947 -12.853 1.443 1.00 70.52 C ATOM 3 CB SER 1 -4.381 -13.197 1.871 1.00 70.52 C ATOM 4 OG SER 1 -5.014 -13.969 0.864 1.00 70.52 O ATOM 5 C SER 1 -2.344 -11.974 2.485 1.00 70.52 C ATOM 6 O SER 1 -2.181 -10.772 2.296 1.00 70.52 O ATOM 7 N GLN 2 -1.983 -12.570 3.629 1.00139.17 N ATOM 8 CA GLN 2 -1.397 -11.828 4.702 1.00139.17 C ATOM 9 CB GLN 2 -1.298 -12.669 5.984 1.00139.17 C ATOM 10 CG GLN 2 -0.478 -13.945 5.833 1.00139.17 C ATOM 11 CD GLN 2 -0.892 -14.854 6.978 1.00139.17 C ATOM 12 OE1 GLN 2 -2.069 -15.178 7.131 1.00139.17 O ATOM 13 NE2 GLN 2 0.096 -15.277 7.810 1.00139.17 N ATOM 14 C GLN 2 -0.058 -11.302 4.272 1.00139.17 C ATOM 15 O GLN 2 0.339 -10.209 4.672 1.00139.17 O ATOM 16 N GLU 3 0.680 -12.058 3.436 1.00 79.58 N ATOM 17 CA GLU 3 1.976 -11.593 3.025 1.00 79.58 C ATOM 18 CB GLU 3 2.755 -12.603 2.167 1.00 79.58 C ATOM 19 CG GLU 3 4.236 -12.242 2.045 1.00 79.58 C ATOM 20 CD GLU 3 4.957 -13.436 1.442 1.00 79.58 C ATOM 21 OE1 GLU 3 4.266 -14.287 0.820 1.00 79.58 O ATOM 22 OE2 GLU 3 6.205 -13.514 1.592 1.00 79.58 O ATOM 23 C GLU 3 1.839 -10.327 2.232 1.00 79.58 C ATOM 24 O GLU 3 2.621 -9.394 2.412 1.00 79.58 O ATOM 25 N THR 4 0.834 -10.254 1.337 1.00117.95 N ATOM 26 CA THR 4 0.660 -9.074 0.535 1.00117.95 C ATOM 27 CB THR 4 -0.444 -9.195 -0.487 1.00117.95 C ATOM 28 OG1 THR 4 -0.319 -8.178 -1.466 1.00117.95 O ATOM 29 CG2 THR 4 -1.809 -9.059 0.195 1.00117.95 C ATOM 30 C THR 4 0.338 -7.961 1.481 1.00117.95 C ATOM 31 O THR 4 0.777 -6.825 1.303 1.00117.95 O ATOM 32 N ARG 5 -0.430 -8.284 2.538 1.00 90.57 N ATOM 33 CA ARG 5 -0.828 -7.329 3.528 1.00 90.57 C ATOM 34 CB ARG 5 -1.652 -7.993 4.641 1.00 90.57 C ATOM 35 CG ARG 5 -2.957 -8.609 4.135 1.00 90.57 C ATOM 36 CD ARG 5 -3.646 -9.520 5.151 1.00 90.57 C ATOM 37 NE ARG 5 -4.896 -10.023 4.519 1.00 90.57 N ATOM 38 CZ ARG 5 -5.336 -11.285 4.794 1.00 90.57 C ATOM 39 NH1 ARG 5 -4.589 -12.100 5.594 1.00 90.57 N ATOM 40 NH2 ARG 5 -6.517 -11.723 4.271 1.00 90.57 N ATOM 41 C ARG 5 0.416 -6.795 4.158 1.00 90.57 C ATOM 42 O ARG 5 0.530 -5.597 4.413 1.00 90.57 O ATOM 43 N LYS 6 1.393 -7.682 4.417 1.00104.03 N ATOM 44 CA LYS 6 2.615 -7.278 5.046 1.00104.03 C ATOM 45 CB LYS 6 3.577 -8.451 5.278 1.00104.03 C ATOM 46 CG LYS 6 3.070 -9.443 6.321 1.00104.03 C ATOM 47 CD LYS 6 3.856 -10.752 6.336 1.00104.03 C ATOM 48 CE LYS 6 3.405 -11.719 7.430 1.00104.03 C ATOM 49 NZ LYS 6 4.241 -12.939 7.402 1.00104.03 N ATOM 50 C LYS 6 3.316 -6.297 4.164 1.00104.03 C ATOM 51 O LYS 6 3.852 -5.298 4.641 1.00104.03 O ATOM 52 N LYS 7 3.324 -6.550 2.843 1.00 48.64 N ATOM 53 CA LYS 7 4.002 -5.663 1.944 1.00 48.64 C ATOM 54 CB LYS 7 3.982 -6.138 0.482 1.00 48.64 C ATOM 55 CG LYS 7 4.870 -7.360 0.249 1.00 48.64 C ATOM 56 CD LYS 7 4.645 -8.028 -1.106 1.00 48.64 C ATOM 57 CE LYS 7 5.578 -9.212 -1.364 1.00 48.64 C ATOM 58 NZ LYS 7 5.271 -9.825 -2.673 1.00 48.64 N ATOM 59 C LYS 7 3.344 -4.321 2.009 1.00 48.64 C ATOM 60 O LYS 7 4.013 -3.291 1.953 1.00 48.64 O ATOM 61 N CYS 8 2.006 -4.299 2.144 1.00 46.08 N ATOM 62 CA CYS 8 1.289 -3.059 2.172 1.00 46.08 C ATOM 63 CB CYS 8 -0.223 -3.251 2.387 1.00 46.08 C ATOM 64 SG CYS 8 -1.050 -4.250 1.115 1.00 46.08 S ATOM 65 C CYS 8 1.773 -2.269 3.348 1.00 46.08 C ATOM 66 O CYS 8 2.013 -1.066 3.247 1.00 46.08 O ATOM 67 N THR 9 1.941 -2.944 4.500 1.00 43.40 N ATOM 68 CA THR 9 2.312 -2.286 5.719 1.00 43.40 C ATOM 69 CB THR 9 2.412 -3.229 6.877 1.00 43.40 C ATOM 70 OG1 THR 9 1.180 -3.905 7.063 1.00 43.40 O ATOM 71 CG2 THR 9 2.758 -2.414 8.134 1.00 43.40 C ATOM 72 C THR 9 3.660 -1.663 5.551 1.00 43.40 C ATOM 73 O THR 9 3.890 -0.536 5.986 1.00 43.40 O ATOM 74 N GLU 10 4.589 -2.390 4.906 1.00111.61 N ATOM 75 CA GLU 10 5.932 -1.910 4.755 1.00111.61 C ATOM 76 CB GLU 10 6.826 -2.950 4.065 1.00111.61 C ATOM 77 CG GLU 10 8.319 -2.654 4.173 1.00111.61 C ATOM 78 CD GLU 10 9.048 -3.796 3.484 1.00111.61 C ATOM 79 OE1 GLU 10 8.385 -4.834 3.220 1.00111.61 O ATOM 80 OE2 GLU 10 10.268 -3.648 3.205 1.00111.61 O ATOM 81 C GLU 10 5.910 -0.658 3.926 1.00111.61 C ATOM 82 O GLU 10 6.622 0.304 4.211 1.00111.61 O ATOM 83 N MET 11 5.069 -0.643 2.878 1.00128.53 N ATOM 84 CA MET 11 4.953 0.466 1.971 1.00128.53 C ATOM 85 CB MET 11 3.891 0.170 0.895 1.00128.53 C ATOM 86 CG MET 11 3.998 0.998 -0.384 1.00128.53 C ATOM 87 SD MET 11 5.300 0.457 -1.534 1.00128.53 S ATOM 88 CE MET 11 4.478 -1.092 -2.008 1.00128.53 C ATOM 89 C MET 11 4.464 1.643 2.753 1.00128.53 C ATOM 90 O MET 11 4.947 2.764 2.602 1.00128.53 O ATOM 91 N LYS 12 3.490 1.385 3.639 1.00129.92 N ATOM 92 CA LYS 12 2.863 2.399 4.425 1.00129.92 C ATOM 93 CB LYS 12 1.786 1.773 5.328 1.00129.92 C ATOM 94 CG LYS 12 0.938 2.736 6.158 1.00129.92 C ATOM 95 CD LYS 12 1.719 3.496 7.228 1.00129.92 C ATOM 96 CE LYS 12 0.827 4.061 8.335 1.00129.92 C ATOM 97 NZ LYS 12 -0.241 4.893 7.744 1.00129.92 N ATOM 98 C LYS 12 3.919 3.041 5.269 1.00129.92 C ATOM 99 O LYS 12 3.957 4.264 5.407 1.00129.92 O ATOM 100 N LYS 13 4.827 2.225 5.838 1.00 94.65 N ATOM 101 CA LYS 13 5.850 2.766 6.684 1.00 94.65 C ATOM 102 CB LYS 13 6.784 1.690 7.263 1.00 94.65 C ATOM 103 CG LYS 13 6.102 0.710 8.219 1.00 94.65 C ATOM 104 CD LYS 13 5.487 1.371 9.453 1.00 94.65 C ATOM 105 CE LYS 13 4.830 0.374 10.409 1.00 94.65 C ATOM 106 NZ LYS 13 4.275 1.090 11.578 1.00 94.65 N ATOM 107 C LYS 13 6.709 3.693 5.883 1.00 94.65 C ATOM 108 O LYS 13 7.005 4.805 6.317 1.00 94.65 O ATOM 109 N LYS 14 7.134 3.260 4.680 1.00122.96 N ATOM 110 CA LYS 14 8.000 4.096 3.903 1.00122.96 C ATOM 111 CB LYS 14 8.597 3.390 2.675 1.00122.96 C ATOM 112 CG LYS 14 9.747 2.457 3.068 1.00122.96 C ATOM 113 CD LYS 14 10.261 1.553 1.945 1.00122.96 C ATOM 114 CE LYS 14 9.855 0.084 2.094 1.00122.96 C ATOM 115 NZ LYS 14 8.472 -0.120 1.614 1.00122.96 N ATOM 116 C LYS 14 7.291 5.346 3.483 1.00122.96 C ATOM 117 O LYS 14 7.854 6.433 3.614 1.00122.96 O ATOM 118 N PHE 15 6.044 5.235 2.971 1.00309.17 N ATOM 119 CA PHE 15 5.294 6.415 2.627 1.00309.17 C ATOM 120 CB PHE 15 4.316 6.253 1.443 1.00309.17 C ATOM 121 CG PHE 15 4.968 5.921 0.141 1.00309.17 C ATOM 122 CD1 PHE 15 5.432 6.910 -0.694 1.00309.17 C ATOM 123 CD2 PHE 15 5.096 4.613 -0.265 1.00309.17 C ATOM 124 CE1 PHE 15 6.016 6.596 -1.900 1.00309.17 C ATOM 125 CE2 PHE 15 5.679 4.291 -1.470 1.00309.17 C ATOM 126 CZ PHE 15 6.142 5.285 -2.299 1.00309.17 C ATOM 127 C PHE 15 4.355 6.616 3.775 1.00309.17 C ATOM 128 O PHE 15 3.189 6.223 3.717 1.00309.17 O ATOM 129 N LYS 16 4.837 7.288 4.826 1.00 84.26 N ATOM 130 CA LYS 16 4.104 7.462 6.043 1.00 84.26 C ATOM 131 CB LYS 16 4.950 8.222 7.067 1.00 84.26 C ATOM 132 CG LYS 16 6.251 7.479 7.355 1.00 84.26 C ATOM 133 CD LYS 16 7.342 8.343 7.975 1.00 84.26 C ATOM 134 CE LYS 16 8.713 7.669 7.947 1.00 84.26 C ATOM 135 NZ LYS 16 9.748 8.606 8.429 1.00 84.26 N ATOM 136 C LYS 16 2.856 8.244 5.797 1.00 84.26 C ATOM 137 O LYS 16 1.779 7.864 6.252 1.00 84.26 O ATOM 138 N ASN 17 2.977 9.363 5.067 1.00 57.47 N ATOM 139 CA ASN 17 1.865 10.241 4.853 1.00 57.47 C ATOM 140 CB ASN 17 2.292 11.563 4.198 1.00 57.47 C ATOM 141 CG ASN 17 3.107 12.334 5.222 1.00 57.47 C ATOM 142 OD1 ASN 17 4.144 11.868 5.691 1.00 57.47 O ATOM 143 ND2 ASN 17 2.624 13.553 5.582 1.00 57.47 N ATOM 144 C ASN 17 0.822 9.629 3.967 1.00 57.47 C ATOM 145 O ASN 17 -0.368 9.718 4.260 1.00 57.47 O ATOM 146 N CYS 18 1.240 8.968 2.873 1.00 71.35 N ATOM 147 CA CYS 18 0.294 8.563 1.869 1.00 71.35 C ATOM 148 CB CYS 18 0.976 8.267 0.516 1.00 71.35 C ATOM 149 SG CYS 18 2.052 9.665 0.051 1.00 71.35 S ATOM 150 C CYS 18 -0.540 7.403 2.315 1.00 71.35 C ATOM 151 O CYS 18 -0.115 6.566 3.108 1.00 71.35 O ATOM 152 N GLU 19 -1.799 7.368 1.821 1.00 72.76 N ATOM 153 CA GLU 19 -2.727 6.320 2.141 1.00 72.76 C ATOM 154 CB GLU 19 -4.195 6.750 1.980 1.00 72.76 C ATOM 155 CG GLU 19 -5.203 5.734 2.501 1.00 72.76 C ATOM 156 CD GLU 19 -6.581 6.365 2.361 1.00 72.76 C ATOM 157 OE1 GLU 19 -6.671 7.516 1.855 1.00 72.76 O ATOM 158 OE2 GLU 19 -7.563 5.693 2.771 1.00 72.76 O ATOM 159 C GLU 19 -2.467 5.170 1.218 1.00 72.76 C ATOM 160 O GLU 19 -2.000 5.361 0.097 1.00 72.76 O ATOM 161 N VAL 20 -2.742 3.934 1.685 1.00124.89 N ATOM 162 CA VAL 20 -2.539 2.774 0.859 1.00124.89 C ATOM 163 CB VAL 20 -1.384 1.918 1.290 1.00124.89 C ATOM 164 CG1 VAL 20 -0.079 2.661 0.978 1.00124.89 C ATOM 165 CG2 VAL 20 -1.552 1.596 2.785 1.00124.89 C ATOM 166 C VAL 20 -3.757 1.911 0.915 1.00124.89 C ATOM 167 O VAL 20 -4.352 1.714 1.973 1.00124.89 O ATOM 168 N ARG 21 -4.153 1.378 -0.259 1.00139.19 N ATOM 169 CA ARG 21 -5.275 0.489 -0.362 1.00139.19 C ATOM 170 CB ARG 21 -6.453 1.095 -1.143 1.00139.19 C ATOM 171 CG ARG 21 -7.031 2.350 -0.481 1.00139.19 C ATOM 172 CD ARG 21 -8.091 2.053 0.580 1.00139.19 C ATOM 173 NE ARG 21 -8.443 3.342 1.241 1.00139.19 N ATOM 174 CZ ARG 21 -9.377 4.163 0.674 1.00139.19 C ATOM 175 NH1 ARG 21 -9.951 3.817 -0.512 1.00139.19 N ATOM 176 NH2 ARG 21 -9.753 5.323 1.288 1.00139.19 N ATOM 177 C ARG 21 -4.788 -0.693 -1.132 1.00139.19 C ATOM 178 O ARG 21 -4.156 -0.548 -2.176 1.00139.19 O ATOM 179 N CYS 22 -5.064 -1.914 -0.642 1.00 53.40 N ATOM 180 CA CYS 22 -4.524 -3.026 -1.361 1.00 53.40 C ATOM 181 CB CYS 22 -3.631 -3.919 -0.482 1.00 53.40 C ATOM 182 SG CYS 22 -2.308 -2.913 0.259 1.00 53.40 S ATOM 183 C CYS 22 -5.651 -3.824 -1.925 1.00 53.40 C ATOM 184 O CYS 22 -6.636 -4.117 -1.250 1.00 53.40 O ATOM 185 N ASP 23 -5.527 -4.176 -3.218 1.00 44.04 N ATOM 186 CA ASP 23 -6.526 -4.951 -3.888 1.00 44.04 C ATOM 187 CB ASP 23 -6.679 -4.553 -5.367 1.00 44.04 C ATOM 188 CG ASP 23 -7.874 -5.281 -5.963 1.00 44.04 C ATOM 189 OD1 ASP 23 -8.400 -6.209 -5.293 1.00 44.04 O ATOM 190 OD2 ASP 23 -8.277 -4.919 -7.101 1.00 44.04 O ATOM 191 C ASP 23 -6.051 -6.362 -3.833 1.00 44.04 C ATOM 192 O ASP 23 -5.067 -6.719 -4.472 1.00 44.04 O ATOM 193 N GLU 24 -6.740 -7.202 -3.046 1.00 90.31 N ATOM 194 CA GLU 24 -6.321 -8.558 -2.846 1.00 90.31 C ATOM 195 CB GLU 24 -7.166 -9.276 -1.782 1.00 90.31 C ATOM 196 CG GLU 24 -7.043 -8.658 -0.385 1.00 90.31 C ATOM 197 CD GLU 24 -5.899 -9.311 0.381 1.00 90.31 C ATOM 198 OE1 GLU 24 -4.760 -9.375 -0.153 1.00 90.31 O ATOM 199 OE2 GLU 24 -6.163 -9.755 1.530 1.00 90.31 O ATOM 200 C GLU 24 -6.423 -9.342 -4.119 1.00 90.31 C ATOM 201 O GLU 24 -5.536 -10.131 -4.436 1.00 90.31 O ATOM 202 N SER 25 -7.497 -9.151 -4.903 1.00 44.27 N ATOM 203 CA SER 25 -7.672 -9.973 -6.069 1.00 44.27 C ATOM 204 CB SER 25 -8.967 -9.646 -6.828 1.00 44.27 C ATOM 205 OG SER 25 -8.914 -8.324 -7.345 1.00 44.27 O ATOM 206 C SER 25 -6.518 -9.781 -7.009 1.00 44.27 C ATOM 207 O SER 25 -5.856 -10.740 -7.406 1.00 44.27 O ATOM 208 N ASN 26 -6.258 -8.521 -7.401 1.00 50.44 N ATOM 209 CA ASN 26 -5.197 -8.187 -8.310 1.00 50.44 C ATOM 210 CB ASN 26 -5.292 -6.747 -8.828 1.00 50.44 C ATOM 211 CG ASN 26 -6.499 -6.679 -9.752 1.00 50.44 C ATOM 212 OD1 ASN 26 -6.810 -7.635 -10.462 1.00 50.44 O ATOM 213 ND2 ASN 26 -7.200 -5.513 -9.742 1.00 50.44 N ATOM 214 C ASN 26 -3.873 -8.333 -7.629 1.00 50.44 C ATOM 215 O ASN 26 -2.871 -8.658 -8.263 1.00 50.44 O ATOM 216 N HIS 27 -3.847 -8.114 -6.304 1.00 92.44 N ATOM 217 CA HIS 27 -2.635 -8.088 -5.536 1.00 92.44 C ATOM 218 ND1 HIS 27 -1.992 -10.592 -3.414 1.00 92.44 N ATOM 219 CG HIS 27 -2.328 -10.466 -4.743 1.00 92.44 C ATOM 220 CB HIS 27 -1.803 -9.379 -5.630 1.00 92.44 C ATOM 221 NE2 HIS 27 -3.397 -12.252 -3.869 1.00 92.44 N ATOM 222 CD2 HIS 27 -3.183 -11.491 -5.005 1.00 92.44 C ATOM 223 CE1 HIS 27 -2.659 -11.674 -2.940 1.00 92.44 C ATOM 224 C HIS 27 -1.776 -6.945 -5.970 1.00 92.44 C ATOM 225 O HIS 27 -0.551 -7.050 -5.995 1.00 92.44 O ATOM 226 N CYS 28 -2.408 -5.806 -6.314 1.00 59.19 N ATOM 227 CA CYS 28 -1.633 -4.645 -6.627 1.00 59.19 C ATOM 228 CB CYS 28 -1.829 -4.121 -8.061 1.00 59.19 C ATOM 229 SG CYS 28 -0.597 -2.869 -8.518 1.00 59.19 S ATOM 230 C CYS 28 -2.047 -3.600 -5.633 1.00 59.19 C ATOM 231 O CYS 28 -3.184 -3.600 -5.161 1.00 59.19 O ATOM 232 N VAL 29 -1.122 -2.687 -5.270 1.00 58.30 N ATOM 233 CA VAL 29 -1.395 -1.723 -4.240 1.00 58.30 C ATOM 234 CB VAL 29 -0.262 -1.592 -3.259 1.00 58.30 C ATOM 235 CG1 VAL 29 -0.564 -0.440 -2.288 1.00 58.30 C ATOM 236 CG2 VAL 29 -0.052 -2.944 -2.558 1.00 58.30 C ATOM 237 C VAL 29 -1.563 -0.369 -4.850 1.00 58.30 C ATOM 238 O VAL 29 -0.874 -0.007 -5.802 1.00 58.30 O ATOM 239 N GLU 30 -2.514 0.418 -4.311 1.00 71.32 N ATOM 240 CA GLU 30 -2.707 1.755 -4.791 1.00 71.32 C ATOM 241 CB GLU 30 -4.182 2.092 -5.070 1.00 71.32 C ATOM 242 CG GLU 30 -4.397 3.482 -5.671 1.00 71.32 C ATOM 243 CD GLU 30 -5.890 3.686 -5.894 1.00 71.32 C ATOM 244 OE1 GLU 30 -6.483 2.873 -6.651 1.00 71.32 O ATOM 245 OE2 GLU 30 -6.460 4.651 -5.316 1.00 71.32 O ATOM 246 C GLU 30 -2.240 2.644 -3.683 1.00 71.32 C ATOM 247 O GLU 30 -2.689 2.501 -2.546 1.00 71.32 O ATOM 248 N VAL 31 -1.306 3.572 -3.982 1.00 63.80 N ATOM 249 CA VAL 31 -0.802 4.463 -2.977 1.00 63.80 C ATOM 250 CB VAL 31 0.699 4.537 -2.948 1.00 63.80 C ATOM 251 CG1 VAL 31 1.119 5.586 -1.906 1.00 63.80 C ATOM 252 CG2 VAL 31 1.261 3.128 -2.685 1.00 63.80 C ATOM 253 C VAL 31 -1.300 5.824 -3.335 1.00 63.80 C ATOM 254 O VAL 31 -1.134 6.288 -4.462 1.00 63.80 O ATOM 255 N ARG 32 -1.927 6.511 -2.367 1.00220.54 N ATOM 256 CA ARG 32 -2.514 7.770 -2.690 1.00220.54 C ATOM 257 CB ARG 32 -4.003 7.779 -2.311 1.00220.54 C ATOM 258 CG ARG 32 -4.837 8.870 -2.971 1.00220.54 C ATOM 259 CD ARG 32 -6.324 8.754 -2.629 1.00220.54 C ATOM 260 NE ARG 32 -6.813 7.469 -3.207 1.00220.54 N ATOM 261 CZ ARG 32 -7.613 6.646 -2.470 1.00220.54 C ATOM 262 NH1 ARG 32 -7.937 6.990 -1.188 1.00220.54 N ATOM 263 NH2 ARG 32 -8.085 5.485 -3.010 1.00220.54 N ATOM 264 C ARG 32 -1.814 8.816 -1.901 1.00220.54 C ATOM 265 O ARG 32 -1.907 8.862 -0.676 1.00220.54 O ATOM 266 N CYS 33 -1.066 9.684 -2.601 1.00138.77 N ATOM 267 CA CYS 33 -0.469 10.783 -1.926 1.00138.77 C ATOM 268 CB CYS 33 0.953 11.090 -2.409 1.00138.77 C ATOM 269 SG CYS 33 2.084 9.728 -1.984 1.00138.77 S ATOM 270 C CYS 33 -1.424 11.870 -2.249 1.00138.77 C ATOM 271 O CYS 33 -2.459 11.573 -2.840 1.00138.77 O ATOM 272 N SER 34 -1.144 13.125 -1.861 1.00 65.30 N ATOM 273 CA SER 34 -2.133 14.145 -2.062 1.00 65.30 C ATOM 274 CB SER 34 -1.615 15.546 -1.703 1.00 65.30 C ATOM 275 OG SER 34 -2.635 16.507 -1.918 1.00 65.30 O ATOM 276 C SER 34 -2.565 14.195 -3.495 1.00 65.30 C ATOM 277 O SER 34 -3.577 13.603 -3.872 1.00 65.30 O ATOM 278 N ASP 35 -1.777 14.887 -4.326 1.00112.39 N ATOM 279 CA ASP 35 -2.090 15.047 -5.711 1.00112.39 C ATOM 280 CB ASP 35 -1.246 16.155 -6.379 1.00112.39 C ATOM 281 CG ASP 35 0.240 15.815 -6.264 1.00112.39 C ATOM 282 OD1 ASP 35 0.644 15.178 -5.256 1.00112.39 O ATOM 283 OD2 ASP 35 0.999 16.194 -7.194 1.00112.39 O ATOM 284 C ASP 35 -1.915 13.776 -6.475 1.00112.39 C ATOM 285 O ASP 35 -2.764 13.419 -7.290 1.00112.39 O ATOM 286 N THR 36 -0.833 13.025 -6.208 1.00 65.11 N ATOM 287 CA THR 36 -0.559 11.938 -7.099 1.00 65.11 C ATOM 288 CB THR 36 0.835 11.976 -7.651 1.00 65.11 C ATOM 289 OG1 THR 36 1.779 11.942 -6.590 1.00 65.11 O ATOM 290 CG2 THR 36 1.009 13.259 -8.481 1.00 65.11 C ATOM 291 C THR 36 -0.743 10.619 -6.439 1.00 65.11 C ATOM 292 O THR 36 -0.626 10.468 -5.225 1.00 65.11 O ATOM 293 N LYS 37 -1.071 9.615 -7.271 1.00140.71 N ATOM 294 CA LYS 37 -1.246 8.292 -6.763 1.00140.71 C ATOM 295 CB LYS 37 -2.714 7.824 -6.801 1.00140.71 C ATOM 296 CG LYS 37 -3.424 8.117 -8.119 1.00140.71 C ATOM 297 CD LYS 37 -4.911 7.753 -8.113 1.00140.71 C ATOM 298 CE LYS 37 -5.217 6.265 -7.973 1.00140.71 C ATOM 299 NZ LYS 37 -6.685 6.070 -7.933 1.00140.71 N ATOM 300 C LYS 37 -0.345 7.371 -7.521 1.00140.71 C ATOM 301 O LYS 37 -0.160 7.504 -8.730 1.00140.71 O ATOM 302 N TYR 38 0.257 6.410 -6.792 1.00 91.73 N ATOM 303 CA TYR 38 1.204 5.494 -7.359 1.00 91.73 C ATOM 304 CB TYR 38 2.511 5.374 -6.548 1.00 91.73 C ATOM 305 CG TYR 38 3.226 6.682 -6.578 1.00 91.73 C ATOM 306 CD1 TYR 38 4.100 6.957 -7.599 1.00 91.73 C ATOM 307 CD2 TYR 38 3.024 7.631 -5.599 1.00 91.73 C ATOM 308 CE1 TYR 38 4.771 8.155 -7.648 1.00 91.73 C ATOM 309 CE2 TYR 38 3.694 8.833 -5.641 1.00 91.73 C ATOM 310 CZ TYR 38 4.564 9.098 -6.671 1.00 91.73 C ATOM 311 OH TYR 38 5.252 10.329 -6.724 1.00 91.73 O ATOM 312 C TYR 38 0.595 4.130 -7.328 1.00 91.73 C ATOM 313 O TYR 38 -0.053 3.759 -6.354 1.00 91.73 O ATOM 314 N THR 39 0.761 3.351 -8.413 1.00 52.82 N ATOM 315 CA THR 39 0.259 2.008 -8.383 1.00 52.82 C ATOM 316 CB THR 39 -0.478 1.594 -9.627 1.00 52.82 C ATOM 317 OG1 THR 39 -1.603 2.434 -9.847 1.00 52.82 O ATOM 318 CG2 THR 39 -0.933 0.135 -9.467 1.00 52.82 C ATOM 319 C THR 39 1.459 1.133 -8.277 1.00 52.82 C ATOM 320 O THR 39 2.358 1.193 -9.113 1.00 52.82 O ATOM 321 N LEU 40 1.515 0.305 -7.218 1.00167.40 N ATOM 322 CA LEU 40 2.662 -0.524 -7.030 1.00167.40 C ATOM 323 CB LEU 40 3.406 -0.140 -5.735 1.00167.40 C ATOM 324 CG LEU 40 4.792 -0.772 -5.554 1.00167.40 C ATOM 325 CD1 LEU 40 4.702 -2.297 -5.465 1.00167.40 C ATOM 326 CD2 LEU 40 5.778 -0.272 -6.619 1.00167.40 C ATOM 327 C LEU 40 2.163 -1.929 -6.912 1.00167.40 C ATOM 328 O LEU 40 1.336 -2.237 -6.055 1.00167.40 O ATOM 329 N CYS 41 2.653 -2.832 -7.780 1.00 32.87 N ATOM 330 CA CYS 41 2.188 -4.181 -7.682 1.00 32.87 C ATOM 331 CB CYS 41 1.765 -4.783 -9.033 1.00 32.87 C ATOM 332 SG CYS 41 0.554 -3.766 -9.939 1.00 32.87 S ATOM 333 C CYS 41 3.377 -4.988 -7.171 1.00 32.87 C ATOM 334 O CYS 41 3.278 -5.541 -6.041 1.00 32.87 O ATOM 335 OXT CYS 41 4.402 -5.059 -7.898 1.00 32.87 O TER END