####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS282_1 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS282_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 30 12 - 41 4.83 12.79 LCS_AVERAGE: 67.76 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 1 - 19 2.00 15.77 LCS_AVERAGE: 33.08 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 2 - 16 0.92 15.46 LCS_AVERAGE: 20.52 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 8 19 21 3 4 6 12 17 19 20 21 21 22 23 23 24 26 27 27 28 28 29 30 LCS_GDT Q 2 Q 2 15 19 21 3 12 14 17 18 19 20 21 21 22 23 23 24 26 27 27 28 28 29 30 LCS_GDT E 3 E 3 15 19 21 5 12 14 17 18 19 20 21 21 22 23 23 24 26 27 27 28 28 29 30 LCS_GDT T 4 T 4 15 19 21 5 12 14 17 18 19 20 21 21 22 23 23 24 26 27 27 28 28 29 30 LCS_GDT R 5 R 5 15 19 21 5 12 14 17 18 19 20 21 21 22 23 23 24 26 27 27 28 28 29 30 LCS_GDT K 6 K 6 15 19 21 7 12 14 17 18 19 20 21 21 22 23 23 24 26 27 27 28 28 29 30 LCS_GDT K 7 K 7 15 19 21 7 12 14 17 18 19 20 21 21 22 23 23 24 26 27 27 28 28 29 30 LCS_GDT C 8 C 8 15 19 21 7 12 14 17 18 19 20 21 21 22 23 23 24 26 27 27 28 28 29 30 LCS_GDT T 9 T 9 15 19 21 7 12 14 17 18 19 20 21 21 22 23 23 26 26 28 29 30 31 33 33 LCS_GDT E 10 E 10 15 19 25 7 12 14 17 18 19 20 21 21 22 23 25 26 26 28 29 30 32 33 33 LCS_GDT M 11 M 11 15 19 25 7 12 14 17 18 19 20 21 21 22 23 25 26 26 28 29 30 32 33 33 LCS_GDT K 12 K 12 15 19 30 7 12 14 17 18 19 20 21 21 23 24 25 26 27 28 29 30 32 33 33 LCS_GDT K 13 K 13 15 19 30 7 11 14 17 18 19 20 21 21 23 24 25 26 27 28 29 30 32 33 33 LCS_GDT K 14 K 14 15 19 30 7 11 14 17 18 19 20 21 21 22 23 23 24 26 28 29 30 32 33 33 LCS_GDT F 15 F 15 15 19 30 4 11 14 17 18 19 20 21 21 22 23 25 25 27 28 29 30 32 33 33 LCS_GDT K 16 K 16 15 19 30 6 12 14 17 18 19 20 21 21 22 23 25 25 27 28 29 30 32 33 33 LCS_GDT N 17 N 17 3 19 30 3 3 4 5 6 9 13 19 21 22 23 24 25 27 28 29 30 32 33 33 LCS_GDT C 18 C 18 4 19 30 3 4 7 9 11 16 18 20 21 23 24 25 26 27 28 29 30 32 33 33 LCS_GDT E 19 E 19 4 19 30 3 11 13 16 18 19 20 21 21 23 24 25 26 27 28 29 30 32 33 33 LCS_GDT V 20 V 20 4 9 30 3 4 7 9 11 13 17 19 21 23 24 25 26 27 28 29 30 32 33 33 LCS_GDT R 21 R 21 4 9 30 3 4 7 9 11 13 17 19 21 23 24 25 26 27 28 29 30 32 33 33 LCS_GDT C 22 C 22 4 9 30 3 4 6 8 11 13 17 19 21 23 24 25 26 27 28 29 30 32 33 33 LCS_GDT D 23 D 23 5 9 30 3 4 6 8 11 13 17 19 21 23 24 25 26 27 28 29 30 32 33 33 LCS_GDT E 24 E 24 5 9 30 3 4 6 7 11 13 17 19 21 23 24 25 26 27 28 29 30 32 33 33 LCS_GDT S 25 S 25 5 9 30 3 4 7 8 11 13 17 19 21 23 24 25 26 27 28 29 30 32 33 33 LCS_GDT N 26 N 26 5 9 30 3 4 7 8 11 13 17 19 21 23 24 25 26 27 28 29 30 32 33 33 LCS_GDT H 27 H 27 5 9 30 3 4 7 9 11 13 15 18 21 23 24 25 25 27 28 29 30 32 33 33 LCS_GDT C 28 C 28 4 9 30 3 5 7 9 11 13 17 19 21 23 24 25 26 27 28 29 30 32 33 33 LCS_GDT V 29 V 29 5 9 30 3 5 7 9 11 13 17 19 21 23 24 25 26 27 28 29 30 32 33 33 LCS_GDT E 30 E 30 5 9 30 3 4 7 9 11 13 17 19 21 23 24 25 26 27 28 29 30 32 33 33 LCS_GDT V 31 V 31 5 9 30 3 5 7 9 11 13 17 19 21 23 24 25 26 27 28 29 30 32 33 33 LCS_GDT R 32 R 32 5 9 30 3 5 7 8 16 17 19 21 21 23 24 25 26 27 28 29 30 32 33 33 LCS_GDT C 33 C 33 5 9 30 3 4 6 17 18 19 20 21 21 23 24 25 26 27 28 29 30 32 33 33 LCS_GDT S 34 S 34 4 9 30 3 3 4 17 18 19 20 21 21 23 24 25 26 27 28 29 30 32 33 33 LCS_GDT D 35 D 35 5 9 30 3 4 6 8 16 17 20 21 21 22 23 25 26 27 28 29 30 32 33 33 LCS_GDT T 36 T 36 5 9 30 4 4 5 6 11 12 13 14 18 20 21 25 25 27 28 29 30 32 33 33 LCS_GDT K 37 K 37 5 9 30 4 4 6 8 11 12 16 19 21 23 24 25 26 27 28 29 30 32 33 33 LCS_GDT Y 38 Y 38 5 9 30 4 4 7 8 11 13 17 19 21 23 24 25 26 27 28 29 30 32 33 33 LCS_GDT T 39 T 39 5 8 30 4 4 5 7 11 13 17 19 21 23 24 25 26 27 28 29 30 32 33 33 LCS_GDT L 40 L 40 3 8 30 3 3 5 7 11 13 17 19 21 23 24 25 26 27 28 29 30 32 33 33 LCS_GDT C 41 C 41 3 8 30 3 4 6 7 11 12 17 19 21 23 24 25 26 27 28 29 30 32 33 33 LCS_AVERAGE LCS_A: 40.45 ( 20.52 33.08 67.76 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 12 14 17 18 19 20 21 21 23 24 25 26 27 28 29 30 32 33 33 GDT PERCENT_AT 17.07 29.27 34.15 41.46 43.90 46.34 48.78 51.22 51.22 56.10 58.54 60.98 63.41 65.85 68.29 70.73 73.17 78.05 80.49 80.49 GDT RMS_LOCAL 0.32 0.67 0.84 1.15 1.26 1.41 1.72 1.96 1.96 3.27 3.39 3.85 4.19 4.11 4.38 4.57 4.83 5.21 5.43 5.43 GDT RMS_ALL_AT 15.62 15.49 15.38 15.64 15.66 15.54 15.26 15.05 15.05 12.43 12.32 12.09 11.57 12.95 12.67 12.72 12.25 12.32 12.04 12.04 # Checking swapping # possible swapping detected: E 10 E 10 # possible swapping detected: E 19 E 19 # possible swapping detected: D 23 D 23 # possible swapping detected: E 30 E 30 # possible swapping detected: D 35 D 35 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 2.375 0 0.038 0.600 5.548 26.818 19.697 5.548 LGA Q 2 Q 2 2.365 0 0.167 0.876 6.965 51.364 25.051 6.965 LGA E 3 E 3 1.044 0 0.076 0.982 3.361 73.636 58.990 1.891 LGA T 4 T 4 1.181 0 0.034 0.049 1.621 65.455 63.377 1.621 LGA R 5 R 5 1.440 0 0.021 1.226 6.190 65.455 36.529 6.190 LGA K 6 K 6 1.146 0 0.031 1.338 6.865 65.455 41.818 6.865 LGA K 7 K 7 0.809 0 0.042 0.848 4.576 81.818 54.141 4.576 LGA C 8 C 8 0.834 0 0.054 0.059 1.052 81.818 79.091 1.052 LGA T 9 T 9 0.673 0 0.030 1.100 2.765 81.818 67.792 2.002 LGA E 10 E 10 0.625 0 0.020 0.806 1.903 81.818 67.879 1.903 LGA M 11 M 11 0.717 0 0.077 1.256 5.641 81.818 59.773 5.641 LGA K 12 K 12 0.715 0 0.023 0.704 4.299 86.364 62.020 4.299 LGA K 13 K 13 1.371 0 0.032 0.504 3.050 65.909 47.273 3.050 LGA K 14 K 14 1.671 0 0.096 1.153 4.697 51.364 47.475 4.697 LGA F 15 F 15 1.437 0 0.484 0.654 5.043 48.182 34.380 5.043 LGA K 16 K 16 0.157 0 0.381 1.254 2.663 75.455 62.626 2.663 LGA N 17 N 17 6.032 0 0.609 1.194 10.865 1.818 0.909 9.304 LGA C 18 C 18 5.022 0 0.398 0.584 9.393 5.909 3.939 9.393 LGA E 19 E 19 2.857 0 0.342 1.103 4.424 25.000 19.596 4.424 LGA V 20 V 20 7.336 0 0.155 0.920 11.510 0.000 0.000 7.309 LGA R 21 R 21 14.121 0 0.104 1.017 24.270 0.000 0.000 22.210 LGA C 22 C 22 18.610 0 0.610 0.691 22.070 0.000 0.000 16.327 LGA D 23 D 23 25.123 0 0.712 1.243 28.103 0.000 0.000 24.253 LGA E 24 E 24 29.629 0 0.172 1.033 33.319 0.000 0.000 31.633 LGA S 25 S 25 35.768 0 0.581 0.913 36.775 0.000 0.000 36.600 LGA N 26 N 26 36.577 0 0.102 1.155 36.683 0.000 0.000 36.683 LGA H 27 H 27 32.502 0 0.578 0.555 37.954 0.000 0.000 37.954 LGA C 28 C 28 27.536 0 0.124 0.693 29.330 0.000 0.000 29.330 LGA V 29 V 29 20.260 0 0.018 1.053 23.151 0.000 0.000 18.375 LGA E 30 E 30 15.929 0 0.135 0.773 18.195 0.000 0.000 17.643 LGA V 31 V 31 9.118 0 0.230 0.966 11.676 0.000 0.000 8.333 LGA R 32 R 32 4.397 0 0.283 1.087 8.662 12.727 6.116 8.662 LGA C 33 C 33 2.444 0 0.523 1.034 5.504 26.818 20.909 5.504 LGA S 34 S 34 2.608 0 0.380 0.620 6.223 35.909 24.848 6.223 LGA D 35 D 35 3.694 0 0.091 0.906 7.846 9.545 6.591 4.877 LGA T 36 T 36 10.384 0 0.378 0.839 14.441 0.000 0.000 12.125 LGA K 37 K 37 10.096 0 0.122 1.337 14.062 0.000 0.000 13.599 LGA Y 38 Y 38 15.633 0 0.105 1.331 18.087 0.000 0.000 17.551 LGA T 39 T 39 17.056 0 0.505 0.545 21.452 0.000 0.000 13.792 LGA L 40 L 40 20.266 0 0.180 0.647 22.504 0.000 0.000 16.807 LGA C 41 C 41 26.373 0 0.479 1.058 30.186 0.000 0.000 26.714 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 9.721 9.522 10.976 29.324 22.215 7.761 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 21 1.96 48.171 45.047 1.017 LGA_LOCAL RMSD: 1.964 Number of atoms: 21 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 15.046 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 9.721 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.189140 * X + 0.550121 * Y + -0.813384 * Z + -0.078742 Y_new = -0.975634 * X + 0.011483 * Y + -0.219103 * Z + 6.717026 Z_new = -0.111193 * X + 0.835006 * Y + 0.538888 * Z + 3.115665 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.379308 0.111424 0.997682 [DEG: -79.0285 6.3841 57.1630 ] ZXZ: -1.307669 1.001679 -0.132386 [DEG: -74.9239 57.3920 -7.5852 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS282_1 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS282_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 21 1.96 45.047 9.72 REMARK ---------------------------------------------------------- MOLECULE T0955TS282_1 PFRMAT TS TARGET T0955 MODEL 1 PARENT N/A ATOM 1 CB SER 1 -2.866 -13.771 -0.589 1.00 0.00 C ATOM 2 OG SER 1 -3.860 -12.950 0.007 1.00 0.00 O ATOM 4 C SER 1 -1.549 -14.280 1.501 1.00 0.00 C ATOM 5 O SER 1 -2.094 -13.813 2.510 1.00 0.00 O ATOM 8 N SER 1 -3.574 -15.624 0.900 1.00 0.00 N ATOM 10 CA SER 1 -2.401 -14.874 0.369 1.00 0.00 C ATOM 11 N GLN 2 -0.220 -14.322 1.324 1.00 0.00 N ATOM 13 CA GLN 2 0.764 -13.806 2.298 1.00 0.00 C ATOM 14 CB GLN 2 1.735 -14.917 2.732 1.00 0.00 C ATOM 15 CG GLN 2 1.109 -16.019 3.580 1.00 0.00 C ATOM 16 CD GLN 2 2.108 -17.087 3.981 1.00 0.00 C ATOM 17 OE1 GLN 2 2.744 -16.995 5.031 1.00 0.00 O ATOM 18 NE2 GLN 2 2.252 -18.109 3.143 1.00 0.00 N ATOM 21 C GLN 2 1.558 -12.623 1.721 1.00 0.00 C ATOM 22 O GLN 2 2.041 -11.772 2.478 1.00 0.00 O ATOM 23 N GLU 3 1.668 -12.576 0.386 1.00 0.00 N ATOM 25 CA GLU 3 2.395 -11.528 -0.366 1.00 0.00 C ATOM 26 CB GLU 3 2.675 -11.984 -1.818 1.00 0.00 C ATOM 27 CG GLU 3 1.488 -12.574 -2.612 1.00 0.00 C ATOM 28 CD GLU 3 1.874 -12.985 -4.019 1.00 0.00 C ATOM 29 OE1 GLU 3 1.770 -12.145 -4.936 1.00 0.00 O ATOM 30 OE2 GLU 3 2.280 -14.152 -4.209 1.00 0.00 O ATOM 31 C GLU 3 1.788 -10.108 -0.342 1.00 0.00 C ATOM 32 O GLU 3 2.524 -9.127 -0.180 1.00 0.00 O ATOM 33 N THR 4 0.453 -10.026 -0.462 1.00 0.00 N ATOM 35 CA THR 4 -0.311 -8.756 -0.473 1.00 0.00 C ATOM 36 CB THR 4 -1.790 -8.967 -1.004 1.00 0.00 C ATOM 37 OG1 THR 4 -2.518 -7.733 -0.939 1.00 0.00 O ATOM 39 CG2 THR 4 -2.545 -10.064 -0.222 1.00 0.00 C ATOM 40 C THR 4 -0.280 -7.986 0.870 1.00 0.00 C ATOM 41 O THR 4 -0.117 -6.757 0.876 1.00 0.00 O ATOM 42 N ARG 5 -0.409 -8.725 1.982 1.00 0.00 N ATOM 44 CA ARG 5 -0.386 -8.174 3.353 1.00 0.00 C ATOM 45 CB ARG 5 -0.917 -9.198 4.384 1.00 0.00 C ATOM 46 CG ARG 5 -0.374 -10.645 4.293 1.00 0.00 C ATOM 47 CD ARG 5 -0.974 -11.555 5.363 1.00 0.00 C ATOM 48 NE ARG 5 -2.398 -11.831 5.144 1.00 0.00 N ATOM 50 CZ ARG 5 -3.162 -12.593 5.927 1.00 0.00 C ATOM 51 NH1 ARG 5 -4.441 -12.767 5.622 1.00 0.00 N ATOM 54 NH2 ARG 5 -2.665 -13.185 7.010 1.00 0.00 N ATOM 57 C ARG 5 1.000 -7.630 3.756 1.00 0.00 C ATOM 58 O ARG 5 1.089 -6.596 4.429 1.00 0.00 O ATOM 59 N LYS 6 2.058 -8.326 3.311 1.00 0.00 N ATOM 61 CA LYS 6 3.469 -7.969 3.573 1.00 0.00 C ATOM 62 CB LYS 6 4.406 -9.130 3.209 1.00 0.00 C ATOM 63 CG LYS 6 4.360 -10.309 4.174 1.00 0.00 C ATOM 64 CD LYS 6 5.317 -11.415 3.742 1.00 0.00 C ATOM 65 CE LYS 6 5.286 -12.608 4.696 1.00 0.00 C ATOM 66 NZ LYS 6 4.004 -13.374 4.656 1.00 0.00 N ATOM 70 C LYS 6 3.919 -6.681 2.856 1.00 0.00 C ATOM 71 O LYS 6 4.530 -5.807 3.485 1.00 0.00 O ATOM 72 N LYS 7 3.585 -6.562 1.558 1.00 0.00 N ATOM 74 CA LYS 7 3.929 -5.380 0.745 1.00 0.00 C ATOM 75 CB LYS 7 3.811 -5.650 -0.775 1.00 0.00 C ATOM 76 CG LYS 7 2.474 -6.180 -1.325 1.00 0.00 C ATOM 77 CD LYS 7 2.481 -6.149 -2.851 1.00 0.00 C ATOM 78 CE LYS 7 1.229 -6.771 -3.456 1.00 0.00 C ATOM 79 NZ LYS 7 1.230 -8.260 -3.381 1.00 0.00 N ATOM 83 C LYS 7 3.160 -4.113 1.163 1.00 0.00 C ATOM 84 O LYS 7 3.740 -3.023 1.206 1.00 0.00 O ATOM 85 N CYS 8 1.877 -4.293 1.515 1.00 0.00 N ATOM 87 CA CYS 8 0.975 -3.211 1.956 1.00 0.00 C ATOM 88 CB CYS 8 -0.483 -3.687 1.973 1.00 0.00 C ATOM 89 SG CYS 8 -1.720 -2.388 2.235 1.00 0.00 S ATOM 90 C CYS 8 1.364 -2.627 3.327 1.00 0.00 C ATOM 91 O CYS 8 1.322 -1.407 3.503 1.00 0.00 O ATOM 92 N THR 9 1.768 -3.498 4.268 1.00 0.00 N ATOM 94 CA THR 9 2.178 -3.093 5.631 1.00 0.00 C ATOM 95 CB THR 9 2.177 -4.307 6.648 1.00 0.00 C ATOM 96 OG1 THR 9 2.400 -3.824 7.980 1.00 0.00 O ATOM 98 CG2 THR 9 3.241 -5.362 6.309 1.00 0.00 C ATOM 99 C THR 9 3.503 -2.293 5.674 1.00 0.00 C ATOM 100 O THR 9 3.595 -1.295 6.397 1.00 0.00 O ATOM 101 N GLU 10 4.497 -2.724 4.880 1.00 0.00 N ATOM 103 CA GLU 10 5.816 -2.061 4.797 1.00 0.00 C ATOM 104 CB GLU 10 6.879 -2.967 4.121 1.00 0.00 C ATOM 105 CG GLU 10 6.602 -3.487 2.688 1.00 0.00 C ATOM 106 CD GLU 10 7.309 -2.682 1.602 1.00 0.00 C ATOM 107 OE1 GLU 10 6.694 -1.736 1.067 1.00 0.00 O ATOM 108 OE2 GLU 10 8.475 -3.000 1.287 1.00 0.00 O ATOM 109 C GLU 10 5.754 -0.665 4.146 1.00 0.00 C ATOM 110 O GLU 10 6.386 0.273 4.641 1.00 0.00 O ATOM 111 N MET 11 4.969 -0.544 3.062 1.00 0.00 N ATOM 113 CA MET 11 4.782 0.726 2.333 1.00 0.00 C ATOM 114 CG MET 11 2.719 -0.056 0.882 1.00 0.00 C ATOM 115 SD MET 11 2.154 -0.386 -0.802 1.00 0.00 S ATOM 116 CE MET 11 1.088 1.027 -1.098 1.00 0.00 C ATOM 117 C MET 11 3.996 1.761 3.166 1.00 0.00 C ATOM 118 O MET 11 4.368 2.939 3.205 1.00 0.00 O ATOM 119 CB MET 11 4.152 0.496 0.939 1.00 0.00 C ATOM 120 N LYS 12 2.949 1.284 3.860 1.00 0.00 N ATOM 122 CA LYS 12 2.076 2.100 4.732 1.00 0.00 C ATOM 123 CB LYS 12 0.874 1.283 5.221 1.00 0.00 C ATOM 124 CG LYS 12 -0.301 1.231 4.261 1.00 0.00 C ATOM 125 CD LYS 12 -1.405 0.333 4.811 1.00 0.00 C ATOM 126 CE LYS 12 -2.701 0.455 4.017 1.00 0.00 C ATOM 127 NZ LYS 12 -3.410 1.744 4.265 1.00 0.00 N ATOM 131 C LYS 12 2.844 2.649 5.942 1.00 0.00 C ATOM 132 O LYS 12 2.603 3.784 6.369 1.00 0.00 O ATOM 133 N LYS 13 3.762 1.830 6.476 1.00 0.00 N ATOM 135 CA LYS 13 4.614 2.180 7.627 1.00 0.00 C ATOM 136 CB LYS 13 5.297 0.935 8.205 1.00 0.00 C ATOM 137 CG LYS 13 4.421 0.125 9.150 1.00 0.00 C ATOM 138 CD LYS 13 5.180 -1.067 9.725 1.00 0.00 C ATOM 139 CE LYS 13 4.362 -1.823 10.770 1.00 0.00 C ATOM 140 NZ LYS 13 3.170 -2.529 10.210 1.00 0.00 N ATOM 144 C LYS 13 5.660 3.264 7.318 1.00 0.00 C ATOM 145 O LYS 13 5.822 4.196 8.114 1.00 0.00 O ATOM 146 N LYS 14 6.359 3.139 6.177 1.00 0.00 N ATOM 148 CA LYS 14 7.393 4.113 5.773 1.00 0.00 C ATOM 149 CB LYS 14 8.376 3.503 4.744 1.00 0.00 C ATOM 150 CG LYS 14 7.780 2.919 3.449 1.00 0.00 C ATOM 151 CD LYS 14 8.881 2.401 2.528 1.00 0.00 C ATOM 152 CE LYS 14 8.332 1.858 1.211 1.00 0.00 C ATOM 153 NZ LYS 14 7.757 2.913 0.324 1.00 0.00 N ATOM 157 C LYS 14 6.918 5.518 5.331 1.00 0.00 C ATOM 158 O LYS 14 7.407 6.510 5.879 1.00 0.00 O ATOM 159 N PHE 15 5.985 5.602 4.367 1.00 0.00 N ATOM 161 CA PHE 15 5.447 6.904 3.909 1.00 0.00 C ATOM 162 CB PHE 15 5.048 6.934 2.404 1.00 0.00 C ATOM 163 CG PHE 15 4.183 5.778 1.912 1.00 0.00 C ATOM 164 CD1 PHE 15 2.875 5.553 2.408 1.00 0.00 C ATOM 165 CD2 PHE 15 4.642 4.979 0.846 1.00 0.00 C ATOM 166 CE1 PHE 15 2.042 4.555 1.842 1.00 0.00 C ATOM 167 CE2 PHE 15 3.819 3.980 0.269 1.00 0.00 C ATOM 168 CZ PHE 15 2.514 3.768 0.768 1.00 0.00 C ATOM 169 C PHE 15 4.431 7.661 4.787 1.00 0.00 C ATOM 170 O PHE 15 4.575 8.873 4.971 1.00 0.00 O ATOM 171 N LYS 16 3.423 6.927 5.298 1.00 0.00 N ATOM 173 CA LYS 16 2.288 7.357 6.176 1.00 0.00 C ATOM 174 CB LYS 16 2.348 8.843 6.642 1.00 0.00 C ATOM 175 CG LYS 16 3.201 9.056 7.890 1.00 0.00 C ATOM 176 CD LYS 16 3.090 10.482 8.418 1.00 0.00 C ATOM 177 CE LYS 16 3.935 10.700 9.672 1.00 0.00 C ATOM 178 NZ LYS 16 5.406 10.651 9.418 1.00 0.00 N ATOM 182 C LYS 16 0.901 7.003 5.583 1.00 0.00 C ATOM 183 O LYS 16 0.052 7.880 5.376 1.00 0.00 O ATOM 184 N ASN 17 0.688 5.698 5.326 1.00 0.00 N ATOM 186 CA ASN 17 -0.551 5.080 4.767 1.00 0.00 C ATOM 187 CB ASN 17 -1.756 5.221 5.730 1.00 0.00 C ATOM 188 CG ASN 17 -1.555 4.475 7.044 1.00 0.00 C ATOM 189 OD1 ASN 17 -1.044 5.033 8.017 1.00 0.00 O ATOM 190 ND2 ASN 17 -1.973 3.213 7.082 1.00 0.00 N ATOM 193 C ASN 17 -0.983 5.432 3.325 1.00 0.00 C ATOM 194 O ASN 17 -1.096 6.615 2.975 1.00 0.00 O ATOM 195 N CYS 18 -1.208 4.379 2.513 1.00 0.00 N ATOM 197 CA CYS 18 -1.641 4.399 1.085 1.00 0.00 C ATOM 198 CB CYS 18 -3.176 4.276 0.984 1.00 0.00 C ATOM 199 SG CYS 18 -3.842 2.695 1.545 1.00 0.00 S ATOM 200 C CYS 18 -1.112 5.519 0.151 1.00 0.00 C ATOM 201 O CYS 18 0.011 5.420 -0.357 1.00 0.00 O ATOM 202 N GLU 19 -1.935 6.557 -0.069 1.00 0.00 N ATOM 204 CA GLU 19 -1.633 7.745 -0.896 1.00 0.00 C ATOM 205 CB GLU 19 -2.933 8.273 -1.519 1.00 0.00 C ATOM 206 CG GLU 19 -3.623 7.314 -2.489 1.00 0.00 C ATOM 207 CD GLU 19 -4.905 7.886 -3.065 1.00 0.00 C ATOM 208 OE1 GLU 19 -4.842 8.544 -4.126 1.00 0.00 O ATOM 209 OE2 GLU 19 -5.978 7.676 -2.459 1.00 0.00 O ATOM 210 C GLU 19 -1.105 8.733 0.154 1.00 0.00 C ATOM 211 O GLU 19 -1.584 8.671 1.283 1.00 0.00 O ATOM 212 N VAL 20 -0.100 9.578 -0.151 1.00 0.00 N ATOM 214 CA VAL 20 0.455 10.497 0.882 1.00 0.00 C ATOM 215 CB VAL 20 1.679 9.869 1.681 1.00 0.00 C ATOM 216 CG1 VAL 20 1.245 8.745 2.585 1.00 0.00 C ATOM 217 CG2 VAL 20 2.771 9.353 0.716 1.00 0.00 C ATOM 218 C VAL 20 0.824 11.991 0.755 1.00 0.00 C ATOM 219 O VAL 20 1.574 12.394 -0.144 1.00 0.00 O ATOM 220 N ARG 21 0.176 12.791 1.615 1.00 0.00 N ATOM 222 CA ARG 21 0.462 14.219 1.850 1.00 0.00 C ATOM 223 CB ARG 21 -0.547 15.190 1.196 1.00 0.00 C ATOM 224 CG ARG 21 -0.279 16.735 1.400 1.00 0.00 C ATOM 225 CD ARG 21 0.824 17.357 0.515 1.00 0.00 C ATOM 226 NE ARG 21 0.997 18.788 0.776 1.00 0.00 N ATOM 228 CZ ARG 21 1.875 19.580 0.161 1.00 0.00 C ATOM 229 NH1 ARG 21 1.937 20.863 0.486 1.00 0.00 N ATOM 232 NH2 ARG 21 2.691 19.107 -0.777 1.00 0.00 N ATOM 235 C ARG 21 0.256 14.220 3.365 1.00 0.00 C ATOM 236 O ARG 21 -0.842 13.944 3.835 1.00 0.00 O ATOM 237 N CYS 22 1.317 14.446 4.127 1.00 0.00 N ATOM 239 CA CYS 22 1.217 14.479 5.584 1.00 0.00 C ATOM 240 CB CYS 22 1.525 13.097 6.154 1.00 0.00 C ATOM 241 SG CYS 22 3.071 12.378 5.545 1.00 0.00 S ATOM 242 C CYS 22 2.168 15.560 6.073 1.00 0.00 C ATOM 243 O CYS 22 1.853 16.306 7.007 1.00 0.00 O ATOM 244 N ASP 23 3.334 15.622 5.405 1.00 0.00 N ATOM 246 CA ASP 23 4.438 16.583 5.620 1.00 0.00 C ATOM 247 CB ASP 23 4.155 17.870 4.812 1.00 0.00 C ATOM 248 CG ASP 23 4.241 17.656 3.305 1.00 0.00 C ATOM 249 OD1 ASP 23 3.211 17.307 2.689 1.00 0.00 O ATOM 250 OD2 ASP 23 5.336 17.853 2.733 1.00 0.00 O ATOM 251 C ASP 23 4.876 16.884 7.079 1.00 0.00 C ATOM 252 O ASP 23 5.620 17.843 7.335 1.00 0.00 O ATOM 253 N GLU 24 4.448 16.005 8.004 1.00 0.00 N ATOM 255 CA GLU 24 4.718 16.030 9.469 1.00 0.00 C ATOM 256 CB GLU 24 6.058 15.340 9.808 1.00 0.00 C ATOM 257 CG GLU 24 6.081 13.833 9.567 1.00 0.00 C ATOM 258 CD GLU 24 7.417 13.203 9.913 1.00 0.00 C ATOM 259 OE1 GLU 24 7.595 12.784 11.077 1.00 0.00 O ATOM 260 OE2 GLU 24 8.288 13.123 9.022 1.00 0.00 O ATOM 261 C GLU 24 4.587 17.349 10.264 1.00 0.00 C ATOM 262 O GLU 24 3.736 17.439 11.158 1.00 0.00 O ATOM 263 N SER 25 5.417 18.349 9.935 1.00 0.00 N ATOM 265 CA SER 25 5.438 19.662 10.607 1.00 0.00 C ATOM 266 CB SER 25 6.885 20.158 10.742 1.00 0.00 C ATOM 267 OG SER 25 7.543 20.192 9.485 1.00 0.00 O ATOM 269 C SER 25 4.569 20.750 9.955 1.00 0.00 C ATOM 270 O SER 25 4.388 20.753 8.732 1.00 0.00 O ATOM 271 N ASN 26 4.058 21.673 10.793 1.00 0.00 N ATOM 273 CA ASN 26 3.193 22.834 10.438 1.00 0.00 C ATOM 274 CB ASN 26 3.938 23.859 9.549 1.00 0.00 C ATOM 275 CG ASN 26 5.121 24.509 10.257 1.00 0.00 C ATOM 276 OD1 ASN 26 4.979 25.553 10.897 1.00 0.00 O ATOM 277 ND2 ASN 26 6.297 23.899 10.131 1.00 0.00 N ATOM 280 C ASN 26 1.801 22.544 9.843 1.00 0.00 C ATOM 281 O ASN 26 0.835 23.243 10.173 1.00 0.00 O ATOM 282 N HIS 27 1.712 21.515 8.989 1.00 0.00 N ATOM 284 CA HIS 27 0.464 21.106 8.317 1.00 0.00 C ATOM 285 CG HIS 27 1.132 22.064 6.040 1.00 0.00 C ATOM 286 CD2 HIS 27 2.300 22.389 5.432 1.00 0.00 C ATOM 287 ND1 HIS 27 0.273 23.115 5.796 1.00 0.00 N ATOM 289 CE1 HIS 27 0.891 24.033 5.076 1.00 0.00 C ATOM 290 NE2 HIS 27 2.123 23.617 4.842 1.00 0.00 N ATOM 292 C HIS 27 -0.193 19.866 8.956 1.00 0.00 C ATOM 293 O HIS 27 0.447 19.161 9.744 1.00 0.00 O ATOM 294 CB HIS 27 0.727 20.844 6.818 1.00 0.00 C ATOM 295 N CYS 28 -1.466 19.627 8.602 1.00 0.00 N ATOM 297 CA CYS 28 -2.291 18.493 9.071 1.00 0.00 C ATOM 298 CB CYS 28 -3.777 18.762 8.798 1.00 0.00 C ATOM 299 SG CYS 28 -4.928 17.577 9.548 1.00 0.00 S ATOM 300 C CYS 28 -1.912 17.230 8.303 1.00 0.00 C ATOM 301 O CYS 28 -1.439 17.333 7.163 1.00 0.00 O ATOM 302 N VAL 29 -2.090 16.051 8.918 1.00 0.00 N ATOM 304 CA VAL 29 -1.795 14.802 8.207 1.00 0.00 C ATOM 305 CB VAL 29 -1.018 13.736 9.089 1.00 0.00 C ATOM 306 CG1 VAL 29 0.393 14.234 9.379 1.00 0.00 C ATOM 307 CG2 VAL 29 -1.730 13.463 10.438 1.00 0.00 C ATOM 308 C VAL 29 -3.127 14.247 7.667 1.00 0.00 C ATOM 309 O VAL 29 -4.035 13.864 8.421 1.00 0.00 O ATOM 310 N GLU 30 -3.238 14.328 6.339 1.00 0.00 N ATOM 312 CA GLU 30 -4.368 13.849 5.535 1.00 0.00 C ATOM 313 CB GLU 30 -5.266 15.017 5.097 1.00 0.00 C ATOM 314 CG GLU 30 -6.030 15.734 6.215 1.00 0.00 C ATOM 315 CD GLU 30 -6.919 16.852 5.703 1.00 0.00 C ATOM 316 OE1 GLU 30 -6.484 18.023 5.744 1.00 0.00 O ATOM 317 OE2 GLU 30 -8.056 16.566 5.271 1.00 0.00 O ATOM 318 C GLU 30 -3.564 13.294 4.365 1.00 0.00 C ATOM 319 O GLU 30 -2.946 14.080 3.636 1.00 0.00 O ATOM 320 N VAL 31 -3.615 11.979 4.125 1.00 0.00 N ATOM 322 CA VAL 31 -2.761 11.387 3.082 1.00 0.00 C ATOM 323 CB VAL 31 -1.916 10.201 3.714 1.00 0.00 C ATOM 324 CG1 VAL 31 -0.961 10.741 4.770 1.00 0.00 C ATOM 325 CG2 VAL 31 -2.807 9.092 4.305 1.00 0.00 C ATOM 326 C VAL 31 -3.352 11.016 1.697 1.00 0.00 C ATOM 327 O VAL 31 -4.041 9.996 1.554 1.00 0.00 O ATOM 328 N ARG 32 -2.938 11.773 0.666 1.00 0.00 N ATOM 330 CA ARG 32 -3.371 11.598 -0.739 1.00 0.00 C ATOM 331 CB ARG 32 -4.552 12.523 -1.103 1.00 0.00 C ATOM 332 CG ARG 32 -5.447 12.024 -2.258 1.00 0.00 C ATOM 333 CD ARG 32 -6.492 13.053 -2.683 1.00 0.00 C ATOM 334 NE ARG 32 -7.595 13.175 -1.728 1.00 0.00 N ATOM 336 CZ ARG 32 -8.767 13.762 -1.980 1.00 0.00 C ATOM 337 NH1 ARG 32 -9.693 13.811 -1.031 1.00 0.00 N ATOM 340 NH2 ARG 32 -9.025 14.299 -3.169 1.00 0.00 N ATOM 343 C ARG 32 -2.185 11.792 -1.709 1.00 0.00 C ATOM 344 O ARG 32 -1.219 12.476 -1.364 1.00 0.00 O ATOM 345 N CYS 33 -2.244 11.146 -2.884 1.00 0.00 N ATOM 347 CA CYS 33 -1.197 11.237 -3.922 1.00 0.00 C ATOM 348 CB CYS 33 -0.781 9.826 -4.377 1.00 0.00 C ATOM 349 SG CYS 33 -2.087 8.856 -5.175 1.00 0.00 S ATOM 350 C CYS 33 -1.614 12.122 -5.129 1.00 0.00 C ATOM 351 O CYS 33 -1.288 11.810 -6.285 1.00 0.00 O ATOM 352 N SER 34 -2.298 13.240 -4.838 1.00 0.00 N ATOM 354 CA SER 34 -2.790 14.205 -5.848 1.00 0.00 C ATOM 355 CB SER 34 -4.271 14.525 -5.570 1.00 0.00 C ATOM 356 OG SER 34 -4.855 15.275 -6.624 1.00 0.00 O ATOM 358 C SER 34 -1.921 15.494 -5.871 1.00 0.00 C ATOM 359 O SER 34 -0.731 15.424 -5.548 1.00 0.00 O ATOM 360 N ASP 35 -2.503 16.633 -6.288 1.00 0.00 N ATOM 362 CA ASP 35 -1.821 17.944 -6.354 1.00 0.00 C ATOM 363 CB ASP 35 -2.254 18.719 -7.613 1.00 0.00 C ATOM 364 CG ASP 35 -1.815 18.043 -8.908 1.00 0.00 C ATOM 365 OD1 ASP 35 -0.704 18.349 -9.397 1.00 0.00 O ATOM 366 OD2 ASP 35 -2.586 17.219 -9.448 1.00 0.00 O ATOM 367 C ASP 35 -2.119 18.770 -5.086 1.00 0.00 C ATOM 368 O ASP 35 -1.197 19.318 -4.471 1.00 0.00 O ATOM 369 N THR 36 -3.410 18.845 -4.721 1.00 0.00 N ATOM 371 CA THR 36 -3.922 19.540 -3.519 1.00 0.00 C ATOM 372 CB THR 36 -5.133 20.472 -3.866 1.00 0.00 C ATOM 373 OG1 THR 36 -6.091 19.752 -4.653 1.00 0.00 O ATOM 375 CG2 THR 36 -4.666 21.703 -4.632 1.00 0.00 C ATOM 376 C THR 36 -4.332 18.380 -2.576 1.00 0.00 C ATOM 377 O THR 36 -5.373 18.410 -1.900 1.00 0.00 O ATOM 378 N LYS 37 -3.442 17.378 -2.542 1.00 0.00 N ATOM 380 CA LYS 37 -3.560 16.107 -1.793 1.00 0.00 C ATOM 381 CB LYS 37 -2.266 15.281 -1.998 1.00 0.00 C ATOM 382 CG LYS 37 -0.988 16.049 -2.383 1.00 0.00 C ATOM 383 CD LYS 37 0.214 15.117 -2.505 1.00 0.00 C ATOM 384 CE LYS 37 1.488 15.863 -2.900 1.00 0.00 C ATOM 385 NZ LYS 37 1.460 16.404 -4.292 1.00 0.00 N ATOM 389 C LYS 37 -3.922 16.084 -0.288 1.00 0.00 C ATOM 390 O LYS 37 -3.197 16.647 0.533 1.00 0.00 O ATOM 391 N TYR 38 -5.119 15.557 0.028 1.00 0.00 N ATOM 393 CA TYR 38 -5.622 15.373 1.414 1.00 0.00 C ATOM 394 CB TYR 38 -6.287 16.647 1.976 1.00 0.00 C ATOM 395 CG TYR 38 -5.424 17.908 2.136 1.00 0.00 C ATOM 396 CD1 TYR 38 -5.458 18.939 1.167 1.00 0.00 C ATOM 397 CE1 TYR 38 -4.688 20.126 1.321 1.00 0.00 C ATOM 398 CD2 TYR 38 -4.594 18.095 3.270 1.00 0.00 C ATOM 399 CE2 TYR 38 -3.820 19.278 3.433 1.00 0.00 C ATOM 400 CZ TYR 38 -3.875 20.284 2.455 1.00 0.00 C ATOM 401 OH TYR 38 -3.130 21.431 2.606 1.00 0.00 O ATOM 403 C TYR 38 -6.576 14.177 1.634 1.00 0.00 C ATOM 404 O TYR 38 -7.510 14.002 0.842 1.00 0.00 O ATOM 405 N THR 39 -6.335 13.347 2.667 1.00 0.00 N ATOM 407 CA THR 39 -7.207 12.197 3.029 1.00 0.00 C ATOM 408 CB THR 39 -6.740 10.864 2.363 1.00 0.00 C ATOM 409 OG1 THR 39 -6.375 11.122 1.003 1.00 0.00 O ATOM 411 CG2 THR 39 -7.867 9.809 2.345 1.00 0.00 C ATOM 412 C THR 39 -7.423 11.960 4.550 1.00 0.00 C ATOM 413 O THR 39 -8.421 12.421 5.117 1.00 0.00 O ATOM 414 N LEU 40 -6.474 11.230 5.168 1.00 0.00 N ATOM 416 CA LEU 40 -6.423 10.797 6.585 1.00 0.00 C ATOM 417 CB LEU 40 -4.974 10.334 6.896 1.00 0.00 C ATOM 418 CG LEU 40 -4.594 9.218 7.898 1.00 0.00 C ATOM 419 CD1 LEU 40 -4.587 7.820 7.251 1.00 0.00 C ATOM 420 CD2 LEU 40 -3.212 9.523 8.453 1.00 0.00 C ATOM 421 C LEU 40 -6.925 11.794 7.663 1.00 0.00 C ATOM 422 O LEU 40 -6.951 13.004 7.428 1.00 0.00 O ATOM 423 N CYS 41 -7.326 11.253 8.829 1.00 0.00 N ATOM 425 CA CYS 41 -7.849 11.985 10.017 1.00 0.00 C ATOM 426 CB CYS 41 -6.747 12.808 10.714 1.00 0.00 C ATOM 427 SG CYS 41 -5.353 11.830 11.319 1.00 0.00 S ATOM 428 C CYS 41 -9.102 12.848 9.809 1.00 0.00 C ATOM 429 O CYS 41 -9.185 13.553 8.779 1.00 0.00 O ATOM 430 OXT CYS 41 -9.991 12.803 10.685 1.00 0.00 O TER END