####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS309_1 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS309_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 40 1 - 40 4.42 5.18 LCS_AVERAGE: 97.50 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 34 3 - 36 1.94 5.53 LCS_AVERAGE: 74.06 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 6 - 24 0.94 5.49 LCS_AVERAGE: 30.22 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 6 40 0 3 4 4 5 16 22 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT Q 2 Q 2 3 33 40 0 3 4 4 5 10 14 26 32 34 34 36 36 36 37 38 38 38 39 39 LCS_GDT E 3 E 3 3 34 40 1 3 4 4 9 15 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT T 4 T 4 3 34 40 1 3 4 10 17 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT R 5 R 5 17 34 40 3 5 18 26 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT K 6 K 6 19 34 40 4 17 24 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT K 7 K 7 19 34 40 13 19 25 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT C 8 C 8 19 34 40 7 19 25 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT T 9 T 9 19 34 40 11 19 25 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT E 10 E 10 19 34 40 13 19 25 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT M 11 M 11 19 34 40 13 19 25 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT K 12 K 12 19 34 40 13 19 25 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT K 13 K 13 19 34 40 10 19 25 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT K 14 K 14 19 34 40 13 19 25 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT F 15 F 15 19 34 40 11 19 25 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT K 16 K 16 19 34 40 4 19 25 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT N 17 N 17 19 34 40 13 19 25 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT C 18 C 18 19 34 40 13 19 25 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT E 19 E 19 19 34 40 13 19 25 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT V 20 V 20 19 34 40 4 18 25 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT R 21 R 21 19 34 40 4 14 25 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT C 22 C 22 19 34 40 4 12 25 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT D 23 D 23 19 34 40 3 15 25 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT E 24 E 24 19 34 40 3 19 25 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT S 25 S 25 9 34 40 4 9 18 26 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT N 26 N 26 9 34 40 3 18 25 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT H 27 H 27 9 34 40 13 19 25 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT C 28 C 28 9 34 40 13 19 25 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT V 29 V 29 9 34 40 13 19 25 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT E 30 E 30 9 34 40 13 19 25 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT V 31 V 31 9 34 40 13 19 25 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT R 32 R 32 9 34 40 4 19 25 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT C 33 C 33 9 34 40 3 9 25 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT S 34 S 34 9 34 40 3 17 25 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT D 35 D 35 4 34 40 3 4 9 15 26 28 31 32 33 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT T 36 T 36 4 34 40 3 4 5 7 9 17 28 31 32 34 35 36 36 36 37 38 38 38 39 39 LCS_GDT K 37 K 37 4 10 40 3 4 4 7 9 10 10 14 15 22 27 34 35 36 37 38 38 38 39 39 LCS_GDT Y 38 Y 38 4 10 40 3 4 4 7 9 10 11 14 16 22 31 34 35 36 37 38 38 38 39 39 LCS_GDT T 39 T 39 4 10 40 3 4 5 7 9 10 10 14 14 19 22 26 28 32 35 37 38 38 39 39 LCS_GDT L 40 L 40 4 10 40 3 4 5 7 9 10 10 11 11 12 14 16 16 18 19 24 26 27 33 34 LCS_GDT C 41 C 41 4 10 39 3 4 5 7 9 10 10 11 11 14 14 16 16 18 20 25 26 27 33 34 LCS_AVERAGE LCS_A: 67.26 ( 30.22 74.06 97.50 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 13 19 25 28 30 30 32 33 33 34 35 36 36 36 37 38 38 38 39 39 GDT PERCENT_AT 31.71 46.34 60.98 68.29 73.17 73.17 78.05 80.49 80.49 82.93 85.37 87.80 87.80 87.80 90.24 92.68 92.68 92.68 95.12 95.12 GDT RMS_LOCAL 0.38 0.58 0.84 1.01 1.23 1.23 1.56 1.77 1.70 1.91 2.13 2.36 2.36 2.36 2.74 3.14 3.14 3.14 3.58 3.58 GDT RMS_ALL_AT 5.47 5.52 5.62 5.59 5.61 5.61 5.64 5.75 5.62 5.72 5.62 5.63 5.63 5.63 5.51 5.39 5.39 5.39 5.29 5.29 # Checking swapping # possible swapping detected: E 10 E 10 # possible swapping detected: F 15 F 15 # possible swapping detected: E 19 E 19 # possible swapping detected: E 24 E 24 # possible swapping detected: E 30 E 30 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 4.852 0 0.045 0.051 6.555 3.636 4.545 4.746 LGA Q 2 Q 2 6.543 0 0.266 0.794 13.405 0.000 0.000 13.405 LGA E 3 E 3 4.112 0 0.205 1.155 6.288 6.818 4.444 4.817 LGA T 4 T 4 3.629 0 0.174 1.332 6.297 14.545 12.468 6.297 LGA R 5 R 5 2.433 0 0.451 1.253 5.201 32.727 23.636 4.606 LGA K 6 K 6 1.527 0 0.025 0.754 2.913 66.364 53.939 2.396 LGA K 7 K 7 0.341 0 0.105 0.606 1.303 95.455 82.424 1.077 LGA C 8 C 8 0.521 0 0.048 0.052 1.020 90.909 85.152 1.020 LGA T 9 T 9 0.427 0 0.031 0.837 2.159 100.000 83.636 2.159 LGA E 10 E 10 0.559 0 0.032 0.633 3.074 95.455 69.091 3.074 LGA M 11 M 11 0.244 0 0.039 0.898 4.040 100.000 80.455 4.040 LGA K 12 K 12 0.624 0 0.018 0.551 1.961 86.364 70.101 1.961 LGA K 13 K 13 1.017 0 0.077 0.532 3.220 77.727 57.980 2.385 LGA K 14 K 14 0.545 0 0.014 0.632 2.022 81.818 76.970 2.022 LGA F 15 F 15 0.927 0 0.029 0.316 1.586 73.636 68.595 1.270 LGA K 16 K 16 1.296 0 0.103 1.112 4.294 61.818 45.859 4.294 LGA N 17 N 17 0.884 0 0.047 1.119 2.736 77.727 69.091 1.782 LGA C 18 C 18 1.074 0 0.051 0.100 1.180 65.455 65.455 1.179 LGA E 19 E 19 0.898 0 0.163 0.769 5.043 77.727 45.657 3.790 LGA V 20 V 20 1.214 0 0.022 0.289 1.518 65.455 63.377 1.518 LGA R 21 R 21 1.724 0 0.064 1.020 5.695 50.909 37.025 2.648 LGA C 22 C 22 1.917 0 0.097 0.345 3.217 54.545 47.879 3.217 LGA D 23 D 23 1.755 0 0.238 0.308 2.631 45.000 40.227 2.260 LGA E 24 E 24 1.293 0 0.147 1.043 3.642 58.636 47.475 3.642 LGA S 25 S 25 2.454 0 0.101 0.572 3.548 40.000 33.030 2.634 LGA N 26 N 26 1.023 0 0.431 1.226 6.426 60.000 35.000 6.426 LGA H 27 H 27 1.026 0 0.238 1.433 5.205 74.091 42.000 5.205 LGA C 28 C 28 1.217 0 0.084 0.885 4.092 69.545 58.182 4.092 LGA V 29 V 29 1.043 0 0.022 1.119 2.818 65.455 58.442 2.486 LGA E 30 E 30 1.019 0 0.129 0.684 2.945 61.818 56.566 2.945 LGA V 31 V 31 0.764 0 0.024 1.079 3.149 81.818 70.390 1.454 LGA R 32 R 32 1.217 0 0.179 1.493 7.731 65.909 41.983 7.731 LGA C 33 C 33 1.626 0 0.546 0.583 4.101 40.000 46.061 1.141 LGA S 34 S 34 2.139 0 0.550 0.916 5.901 25.000 33.939 1.446 LGA D 35 D 35 4.789 0 0.069 0.166 7.263 5.000 18.636 2.376 LGA T 36 T 36 6.172 0 0.227 0.855 7.776 1.364 1.558 4.114 LGA K 37 K 37 9.381 0 0.192 1.559 16.868 0.000 0.000 16.868 LGA Y 38 Y 38 10.858 0 0.051 1.343 13.922 0.000 0.000 13.922 LGA T 39 T 39 12.621 0 0.155 1.150 15.178 0.000 0.000 10.042 LGA L 40 L 40 18.909 0 0.194 0.670 23.780 0.000 0.000 19.474 LGA C 41 C 41 20.659 0 0.110 0.158 22.935 0.000 0.000 19.823 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 5.141 5.220 5.705 50.554 42.226 25.499 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 33 1.77 71.951 74.538 1.762 LGA_LOCAL RMSD: 1.773 Number of atoms: 33 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.753 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 5.141 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.138645 * X + -0.817218 * Y + 0.559404 * Z + -0.617423 Y_new = -0.905604 * X + -0.333235 * Y + -0.262364 * Z + 1.034413 Z_new = 0.400822 * X + -0.470223 * Y + -0.786278 * Z + -1.541870 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.418879 -0.412413 -2.602618 [DEG: -81.2958 -23.6296 -149.1190 ] ZXZ: 1.132249 2.475557 2.435703 [DEG: 64.8731 141.8390 139.5555 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS309_1 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS309_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 33 1.77 74.538 5.14 REMARK ---------------------------------------------------------- MOLECULE T0955TS309_1 PFRMAT TS TARGET T0955 MODEL 1 PARENT 5kvnA ATOM 1 CB SER 1 -0.722 -18.246 3.196 1.00 28.28 C ATOM 2 OG SER 1 -1.826 -19.090 3.473 1.00 31.59 O ATOM 4 C SER 1 1.624 -18.129 2.198 1.00 26.45 C ATOM 5 O SER 1 2.256 -17.646 3.148 1.00 29.81 O ATOM 8 N SER 1 0.804 -20.171 3.310 1.00 31.91 N ATOM 10 CA SER 1 0.384 -19.018 2.467 1.00 28.60 C ATOM 11 N GLN 2 1.981 -17.956 0.912 1.00 29.06 N ATOM 13 CA GLN 2 3.178 -17.186 0.494 1.00 27.13 C ATOM 14 CB GLN 2 4.111 -18.098 -0.326 1.00 28.41 C ATOM 15 CG GLN 2 4.875 -19.125 0.496 1.00 28.99 C ATOM 16 CD GLN 2 5.781 -19.996 -0.353 1.00 28.66 C ATOM 17 OE1 GLN 2 5.375 -21.057 -0.826 1.00 31.28 O ATOM 18 NE2 GLN 2 7.018 -19.550 -0.551 1.00 31.51 N ATOM 21 C GLN 2 3.210 -15.765 -0.154 1.00 26.50 C ATOM 22 O GLN 2 4.049 -14.950 0.253 1.00 30.45 O ATOM 23 N GLU 3 2.315 -15.462 -1.111 1.00 27.25 N ATOM 25 CA GLU 3 2.349 -14.189 -1.893 1.00 25.80 C ATOM 26 CB GLU 3 2.301 -14.553 -3.395 1.00 28.09 C ATOM 27 CG GLU 3 3.636 -14.997 -3.979 1.00 28.99 C ATOM 28 CD GLU 3 3.545 -15.346 -5.453 1.00 28.92 C ATOM 29 OE1 GLU 3 3.741 -14.443 -6.294 1.00 31.51 O ATOM 30 OE2 GLU 3 3.279 -16.524 -5.772 1.00 31.36 O ATOM 31 C GLU 3 1.631 -12.797 -1.750 1.00 25.29 C ATOM 32 O GLU 3 2.188 -11.817 -2.270 1.00 28.79 O ATOM 33 N THR 4 0.494 -12.647 -1.045 1.00 24.27 N ATOM 35 CA THR 4 -0.235 -11.334 -1.034 1.00 22.66 C ATOM 36 CB THR 4 -1.778 -11.552 -1.272 1.00 25.04 C ATOM 37 OG1 THR 4 -2.184 -12.806 -0.711 1.00 28.92 O ATOM 39 CG2 THR 4 -2.119 -11.507 -2.754 1.00 27.48 C ATOM 40 C THR 4 -0.126 -10.115 -0.078 1.00 22.87 C ATOM 41 O THR 4 -0.268 -8.982 -0.578 1.00 22.19 O ATOM 42 N ARG 5 0.164 -10.262 1.228 1.00 24.70 N ATOM 44 CA ARG 5 0.171 -9.045 2.077 1.00 24.60 C ATOM 45 CB ARG 5 -1.146 -9.031 2.927 1.00 27.72 C ATOM 46 CG ARG 5 -1.382 -10.148 3.992 1.00 30.09 C ATOM 47 CD ARG 5 -2.283 -11.303 3.518 1.00 29.67 C ATOM 48 NE ARG 5 -1.606 -12.183 2.562 1.00 27.07 N ATOM 50 CZ ARG 5 -1.928 -13.456 2.329 1.00 27.54 C ATOM 51 NH1 ARG 5 -1.238 -14.152 1.435 1.00 27.07 N ATOM 54 NH2 ARG 5 -2.931 -14.042 2.976 1.00 31.59 N ATOM 57 C ARG 5 1.372 -8.568 2.946 1.00 26.45 C ATOM 58 O ARG 5 1.223 -8.347 4.162 1.00 30.45 O ATOM 59 N LYS 6 2.537 -8.368 2.316 1.00 26.56 N ATOM 61 CA LYS 6 3.725 -7.799 2.984 1.00 25.91 C ATOM 62 CB LYS 6 5.033 -8.473 2.526 1.00 29.33 C ATOM 63 CG LYS 6 6.228 -8.294 3.489 1.00 29.81 C ATOM 64 CD LYS 6 7.473 -8.988 2.959 1.00 30.31 C ATOM 65 CE LYS 6 8.648 -8.813 3.906 1.00 30.45 C ATOM 66 NZ LYS 6 9.874 -9.488 3.399 1.00 31.91 N ATOM 70 C LYS 6 3.795 -6.274 2.783 1.00 22.87 C ATOM 71 O LYS 6 4.087 -5.520 3.718 1.00 24.18 O ATOM 72 N LYS 7 3.500 -5.869 1.539 1.00 22.54 N ATOM 74 CA LYS 7 3.561 -4.486 1.035 1.00 22.11 C ATOM 75 CB LYS 7 3.512 -4.496 -0.500 1.00 24.65 C ATOM 76 CG LYS 7 4.796 -4.982 -1.158 1.00 28.22 C ATOM 77 CD LYS 7 4.679 -4.968 -2.674 1.00 28.79 C ATOM 78 CE LYS 7 5.963 -5.451 -3.331 1.00 31.20 C ATOM 79 NZ LYS 7 5.861 -5.441 -4.816 1.00 31.99 N ATOM 83 C LYS 7 2.644 -3.380 1.583 1.00 19.40 C ATOM 84 O LYS 7 3.025 -2.202 1.527 1.00 20.05 O ATOM 85 N CYS 8 1.475 -3.738 2.132 1.00 19.76 N ATOM 87 CA CYS 8 0.524 -2.751 2.690 1.00 20.87 C ATOM 88 CB CYS 8 -0.826 -3.396 3.001 1.00 25.91 C ATOM 89 SG CYS 8 -2.107 -2.249 3.566 1.00 28.28 S ATOM 90 C CYS 8 1.070 -2.061 3.949 1.00 21.69 C ATOM 91 O CYS 8 0.916 -0.844 4.095 1.00 21.40 O ATOM 92 N THR 9 1.699 -2.844 4.839 1.00 23.12 N ATOM 94 CA THR 9 2.296 -2.330 6.086 1.00 24.74 C ATOM 95 CB THR 9 2.577 -3.453 7.115 1.00 28.22 C ATOM 96 OG1 THR 9 3.052 -4.626 6.440 1.00 29.53 O ATOM 98 CG2 THR 9 1.323 -3.773 7.897 1.00 32.65 C ATOM 99 C THR 9 3.575 -1.506 5.845 1.00 23.55 C ATOM 100 O THR 9 3.774 -0.471 6.495 1.00 24.36 O ATOM 101 N GLU 10 4.413 -1.961 4.900 1.00 23.72 N ATOM 103 CA GLU 10 5.671 -1.283 4.527 1.00 24.27 C ATOM 104 CB GLU 10 6.577 -2.207 3.716 1.00 24.36 C ATOM 105 CG GLU 10 7.511 -3.034 4.577 1.00 29.53 C ATOM 106 CD GLU 10 8.404 -3.951 3.762 1.00 28.73 C ATOM 107 OE1 GLU 10 9.513 -3.520 3.381 1.00 30.98 O ATOM 108 OE2 GLU 10 8.000 -5.105 3.505 1.00 29.74 O ATOM 109 C GLU 10 5.482 0.051 3.792 1.00 21.36 C ATOM 110 O GLU 10 6.199 1.019 4.080 1.00 22.79 O ATOM 111 N MET 11 4.517 0.093 2.859 1.00 19.80 N ATOM 113 CA MET 11 4.192 1.302 2.075 1.00 19.89 C ATOM 114 CG MET 11 4.012 0.444 -0.311 1.00 26.45 C ATOM 115 SD MET 11 3.050 0.533 -1.829 1.00 27.19 S ATOM 116 CE MET 11 3.805 1.951 -2.638 1.00 31.13 C ATOM 117 C MET 11 3.559 2.410 2.927 1.00 17.50 C ATOM 118 O MET 11 3.812 3.598 2.690 1.00 17.40 O ATOM 119 CB MET 11 3.274 0.976 0.896 1.00 20.87 C ATOM 120 N LYS 12 2.754 2.000 3.917 1.00 18.99 N ATOM 122 CA LYS 12 2.064 2.910 4.852 1.00 22.42 C ATOM 123 CB LYS 12 0.996 2.146 5.646 1.00 25.54 C ATOM 124 CG LYS 12 -0.273 2.942 5.953 1.00 27.25 C ATOM 125 CD LYS 12 -1.270 2.109 6.743 1.00 28.86 C ATOM 126 CE LYS 12 -2.530 2.902 7.051 1.00 30.16 C ATOM 127 NZ LYS 12 -3.513 2.097 7.825 1.00 31.05 N ATOM 131 C LYS 12 3.063 3.607 5.804 1.00 25.04 C ATOM 132 O LYS 12 2.869 4.779 6.152 1.00 27.30 O ATOM 133 N LYS 13 4.116 2.875 6.202 1.00 24.27 N ATOM 135 CA LYS 13 5.181 3.377 7.094 1.00 26.12 C ATOM 136 CB LYS 13 5.966 2.217 7.709 1.00 27.01 C ATOM 137 CG LYS 13 5.331 1.647 8.962 1.00 29.26 C ATOM 138 CD LYS 13 6.155 0.495 9.528 1.00 29.53 C ATOM 139 CE LYS 13 5.530 -0.094 10.792 1.00 31.05 C ATOM 140 NZ LYS 13 4.250 -0.820 10.543 1.00 31.05 N ATOM 144 C LYS 13 6.152 4.358 6.413 1.00 25.54 C ATOM 145 O LYS 13 6.654 5.288 7.059 1.00 28.99 O ATOM 146 N LYS 14 6.386 4.142 5.111 1.00 24.41 N ATOM 148 CA LYS 14 7.278 4.966 4.268 1.00 27.36 C ATOM 149 CB LYS 14 7.689 4.195 3.006 1.00 26.73 C ATOM 150 CG LYS 14 8.613 3.019 3.255 1.00 28.86 C ATOM 151 CD LYS 14 8.971 2.313 1.957 1.00 28.66 C ATOM 152 CE LYS 14 9.897 1.134 2.208 1.00 29.46 C ATOM 153 NZ LYS 14 10.255 0.430 0.947 1.00 30.98 N ATOM 157 C LYS 14 6.653 6.307 3.853 1.00 26.73 C ATOM 158 O LYS 14 7.352 7.326 3.776 1.00 32.24 O ATOM 159 N PHE 15 5.338 6.279 3.601 1.00 22.79 N ATOM 161 CA PHE 15 4.544 7.443 3.169 1.00 24.41 C ATOM 162 CB PHE 15 3.914 7.151 1.774 1.00 22.38 C ATOM 163 CG PHE 15 4.909 6.705 0.697 1.00 23.20 C ATOM 164 CD1 PHE 15 5.542 7.656 -0.140 1.00 27.25 C ATOM 165 CD2 PHE 15 5.189 5.334 0.491 1.00 23.12 C ATOM 166 CE1 PHE 15 6.438 7.249 -1.168 1.00 29.74 C ATOM 167 CE2 PHE 15 6.083 4.911 -0.532 1.00 28.03 C ATOM 168 CZ PHE 15 6.709 5.873 -1.362 1.00 30.98 C ATOM 169 C PHE 15 3.455 7.778 4.223 1.00 22.95 C ATOM 170 O PHE 15 2.274 7.972 3.883 1.00 21.84 O ATOM 171 N LYS 16 3.902 7.985 5.471 1.00 23.37 N ATOM 173 CA LYS 16 3.044 8.267 6.655 1.00 26.23 C ATOM 174 CB LYS 16 3.902 8.256 7.939 1.00 29.60 C ATOM 175 CG LYS 16 5.203 9.066 7.896 1.00 27.54 C ATOM 176 CD LYS 16 5.958 8.972 9.218 1.00 31.20 C ATOM 177 CE LYS 16 7.258 9.772 9.198 1.00 30.75 C ATOM 178 NZ LYS 16 7.050 11.250 9.153 1.00 31.44 N ATOM 182 C LYS 16 2.074 9.482 6.651 1.00 25.65 C ATOM 183 O LYS 16 1.286 9.655 7.595 1.00 30.31 O ATOM 184 N ASN 17 2.116 10.282 5.579 1.00 23.95 N ATOM 186 CA ASN 17 1.257 11.473 5.416 1.00 26.18 C ATOM 187 CB ASN 17 2.106 12.690 5.005 1.00 29.39 C ATOM 188 CG ASN 17 3.189 13.029 6.022 1.00 28.92 C ATOM 189 OD1 ASN 17 4.318 12.542 5.931 1.00 31.36 O ATOM 190 ND2 ASN 17 2.853 13.882 6.986 1.00 32.48 N ATOM 193 C ASN 17 0.171 11.205 4.358 1.00 25.70 C ATOM 194 O ASN 17 -0.846 11.910 4.297 1.00 29.46 O ATOM 195 N CYS 18 0.406 10.152 3.567 1.00 23.37 N ATOM 197 CA CYS 18 -0.450 9.684 2.466 1.00 22.87 C ATOM 198 CB CYS 18 0.438 9.172 1.338 1.00 21.01 C ATOM 199 SG CYS 18 1.818 10.261 1.005 1.00 26.90 S ATOM 200 C CYS 18 -1.476 8.603 2.846 1.00 23.90 C ATOM 201 O CYS 18 -1.411 8.035 3.942 1.00 27.13 O ATOM 202 N GLU 19 -2.472 8.401 1.975 1.00 23.50 N ATOM 204 CA GLU 19 -3.520 7.388 2.164 1.00 26.01 C ATOM 205 CB GLU 19 -4.908 8.002 1.979 1.00 27.54 C ATOM 206 CG GLU 19 -5.334 8.845 3.151 1.00 28.34 C ATOM 207 CD GLU 19 -6.712 9.456 2.968 1.00 28.86 C ATOM 208 OE1 GLU 19 -6.799 10.579 2.427 1.00 31.91 O ATOM 209 OE2 GLU 19 -7.707 8.816 3.368 1.00 32.07 O ATOM 210 C GLU 19 -3.324 6.190 1.226 1.00 24.79 C ATOM 211 O GLU 19 -3.312 6.344 -0.005 1.00 23.16 O ATOM 212 N VAL 20 -3.139 5.009 1.832 1.00 25.49 N ATOM 214 CA VAL 20 -2.914 3.744 1.114 1.00 22.30 C ATOM 215 CB VAL 20 -1.679 2.949 1.703 1.00 19.98 C ATOM 216 CG1 VAL 20 -0.975 2.164 0.607 1.00 17.03 C ATOM 217 CG2 VAL 20 -0.681 3.894 2.374 1.00 19.80 C ATOM 218 C VAL 20 -4.183 2.861 1.123 1.00 25.09 C ATOM 219 O VAL 20 -4.637 2.410 2.187 1.00 29.26 O ATOM 220 N ARG 21 -4.777 2.701 -0.066 1.00 24.36 N ATOM 222 CA ARG 21 -5.971 1.869 -0.287 1.00 26.96 C ATOM 223 CB ARG 21 -7.014 2.577 -1.187 1.00 29.46 C ATOM 224 CG ARG 21 -6.480 3.351 -2.412 1.00 25.19 C ATOM 225 CD ARG 21 -7.603 4.002 -3.218 1.00 27.60 C ATOM 226 NE ARG 21 -8.444 3.023 -3.916 1.00 26.73 N ATOM 228 CZ ARG 21 -9.493 3.320 -4.683 1.00 28.09 C ATOM 229 NH1 ARG 21 -9.869 4.581 -4.879 1.00 29.95 N ATOM 232 NH2 ARG 21 -10.177 2.343 -5.263 1.00 31.13 N ATOM 235 C ARG 21 -5.579 0.483 -0.831 1.00 24.46 C ATOM 236 O ARG 21 -5.046 0.373 -1.945 1.00 20.80 O ATOM 237 N CYS 22 -5.796 -0.551 -0.009 1.00 27.30 N ATOM 239 CA CYS 22 -5.463 -1.934 -0.359 1.00 24.89 C ATOM 240 CB CYS 22 -4.633 -2.587 0.747 1.00 27.91 C ATOM 241 SG CYS 22 -2.881 -2.212 0.623 1.00 22.91 S ATOM 242 C CYS 22 -6.626 -2.852 -0.733 1.00 25.96 C ATOM 243 O CYS 22 -7.673 -2.862 -0.072 1.00 30.53 O ATOM 244 N ASP 23 -6.409 -3.598 -1.822 1.00 22.95 N ATOM 246 CA ASP 23 -7.336 -4.593 -2.382 1.00 24.60 C ATOM 247 CB ASP 23 -7.659 -4.284 -3.850 1.00 26.12 C ATOM 248 CG ASP 23 -8.618 -3.121 -4.009 1.00 27.84 C ATOM 249 OD1 ASP 23 -8.149 -1.966 -4.122 1.00 28.22 O ATOM 250 OD2 ASP 23 -9.846 -3.355 -4.041 1.00 32.07 O ATOM 251 C ASP 23 -6.629 -5.949 -2.240 1.00 23.86 C ATOM 252 O ASP 23 -5.559 -6.173 -2.826 1.00 21.22 O ATOM 253 N GLU 24 -7.241 -6.834 -1.448 1.00 26.56 N ATOM 255 CA GLU 24 -6.724 -8.172 -1.104 1.00 25.59 C ATOM 256 CB GLU 24 -7.634 -8.821 -0.061 1.00 28.60 C ATOM 257 CG GLU 24 -7.579 -8.157 1.305 1.00 28.73 C ATOM 258 CD GLU 24 -8.489 -8.825 2.319 1.00 28.86 C ATOM 259 OE1 GLU 24 -9.664 -8.415 2.427 1.00 31.99 O ATOM 260 OE2 GLU 24 -8.030 -9.758 3.011 1.00 31.91 O ATOM 261 C GLU 24 -6.298 -9.239 -2.130 1.00 25.65 C ATOM 262 O GLU 24 -5.165 -9.727 -2.034 1.00 25.44 O ATOM 263 N SER 25 -7.158 -9.584 -3.102 1.00 26.78 N ATOM 265 CA SER 25 -6.826 -10.637 -4.087 1.00 27.36 C ATOM 266 CB SER 25 -8.107 -11.363 -4.508 1.00 30.09 C ATOM 267 OG SER 25 -9.090 -10.444 -4.958 1.00 30.98 O ATOM 269 C SER 25 -6.046 -10.156 -5.326 1.00 25.59 C ATOM 270 O SER 25 -4.890 -10.558 -5.499 1.00 27.97 O ATOM 271 N ASN 26 -6.677 -9.342 -6.189 1.00 25.34 N ATOM 273 CA ASN 26 -6.032 -8.718 -7.369 1.00 27.78 C ATOM 274 CB ASN 26 -7.085 -8.092 -8.303 1.00 28.66 C ATOM 275 CG ASN 26 -8.070 -9.115 -8.855 1.00 28.86 C ATOM 276 OD1 ASN 26 -7.848 -9.696 -9.919 1.00 32.82 O ATOM 277 ND2 ASN 26 -9.172 -9.325 -8.141 1.00 30.24 N ATOM 280 C ASN 26 -5.070 -7.669 -6.756 1.00 26.90 C ATOM 281 O ASN 26 -5.243 -6.461 -6.955 1.00 27.84 O ATOM 282 N HIS 27 -3.981 -8.160 -6.155 1.00 25.86 N ATOM 284 CA HIS 27 -3.026 -7.348 -5.378 1.00 23.55 C ATOM 285 CG HIS 27 -1.329 -9.257 -5.431 1.00 24.79 C ATOM 286 CD2 HIS 27 -0.002 -9.363 -5.689 1.00 28.92 C ATOM 287 ND1 HIS 27 -1.932 -10.291 -6.115 1.00 28.03 N ATOM 289 CE1 HIS 27 -1.013 -10.991 -6.757 1.00 30.75 C ATOM 290 NE2 HIS 27 0.165 -10.448 -6.514 1.00 29.95 N ATOM 292 C HIS 27 -2.216 -6.188 -5.987 1.00 26.50 C ATOM 293 O HIS 27 -1.054 -6.335 -6.393 1.00 30.02 O ATOM 294 CB HIS 27 -2.097 -8.284 -4.582 1.00 22.19 C ATOM 295 N CYS 28 -2.867 -5.021 -5.983 1.00 25.44 N ATOM 297 CA CYS 28 -2.314 -3.750 -6.447 1.00 27.72 C ATOM 298 CB CYS 28 -3.072 -3.229 -7.673 1.00 30.98 C ATOM 299 SG CYS 28 -4.788 -2.784 -7.331 1.00 28.79 S ATOM 300 C CYS 28 -2.540 -2.814 -5.256 1.00 25.04 C ATOM 301 O CYS 28 -3.636 -2.798 -4.683 1.00 21.11 O ATOM 302 N VAL 29 -1.490 -2.098 -4.848 1.00 27.54 N ATOM 304 CA VAL 29 -1.561 -1.157 -3.723 1.00 23.50 C ATOM 305 CB VAL 29 -0.544 -1.574 -2.563 1.00 22.42 C ATOM 306 CG1 VAL 29 0.877 -1.692 -3.073 1.00 27.13 C ATOM 307 CG2 VAL 29 -0.635 -0.651 -1.361 1.00 19.05 C ATOM 308 C VAL 29 -1.412 0.282 -4.274 1.00 25.44 C ATOM 309 O VAL 29 -0.379 0.628 -4.861 1.00 30.24 O ATOM 310 N GLU 30 -2.501 1.054 -4.164 1.00 23.37 N ATOM 312 CA GLU 30 -2.568 2.445 -4.628 1.00 25.04 C ATOM 313 CB GLU 30 -3.865 2.706 -5.395 1.00 24.27 C ATOM 314 CG GLU 30 -3.700 2.601 -6.890 1.00 29.06 C ATOM 315 CD GLU 30 -4.993 2.859 -7.644 1.00 27.66 C ATOM 316 OE1 GLU 30 -5.256 4.029 -7.994 1.00 29.74 O ATOM 317 OE2 GLU 30 -5.744 1.892 -7.889 1.00 30.45 O ATOM 318 C GLU 30 -2.419 3.452 -3.492 1.00 22.46 C ATOM 319 O GLU 30 -3.242 3.492 -2.568 1.00 20.24 O ATOM 320 N VAL 31 -1.321 4.213 -3.547 1.00 24.32 N ATOM 322 CA VAL 31 -1.000 5.251 -2.566 1.00 21.69 C ATOM 323 CB VAL 31 0.327 4.902 -1.738 1.00 21.26 C ATOM 324 CG1 VAL 31 1.582 4.878 -2.622 1.00 26.50 C ATOM 325 CG2 VAL 31 0.497 5.829 -0.524 1.00 18.36 C ATOM 326 C VAL 31 -0.920 6.596 -3.314 1.00 24.18 C ATOM 327 O VAL 31 -0.285 6.689 -4.375 1.00 28.66 O ATOM 328 N ARG 32 -1.652 7.587 -2.800 1.00 22.99 N ATOM 330 CA ARG 32 -1.665 8.944 -3.353 1.00 25.65 C ATOM 331 CB ARG 32 -3.101 9.458 -3.633 1.00 26.84 C ATOM 332 CG ARG 32 -4.207 9.119 -2.614 1.00 24.60 C ATOM 333 CD ARG 32 -5.565 9.686 -3.024 1.00 27.25 C ATOM 334 NE ARG 32 -5.621 11.149 -2.936 1.00 26.67 N ATOM 336 CZ ARG 32 -6.686 11.896 -3.231 1.00 28.53 C ATOM 337 NH1 ARG 32 -7.823 11.343 -3.643 1.00 32.24 N ATOM 340 NH2 ARG 32 -6.612 13.215 -3.111 1.00 32.24 N ATOM 343 C ARG 32 -0.864 9.847 -2.399 1.00 23.33 C ATOM 344 O ARG 32 -1.152 9.900 -1.198 1.00 21.26 O ATOM 345 N CYS 33 0.110 10.564 -2.969 1.00 25.70 N ATOM 347 CA CYS 33 1.029 11.472 -2.264 1.00 24.18 C ATOM 348 CB CYS 33 2.490 11.204 -2.653 1.00 28.28 C ATOM 349 SG CYS 33 3.299 9.904 -1.708 1.00 28.22 S ATOM 350 C CYS 33 0.580 12.897 -2.616 1.00 24.94 C ATOM 351 O CYS 33 0.840 13.411 -3.712 1.00 26.67 O ATOM 352 N SER 34 -0.186 13.457 -1.672 1.00 25.70 N ATOM 354 CA SER 34 -0.868 14.764 -1.719 1.00 27.01 C ATOM 355 CB SER 34 -1.616 14.937 -0.382 1.00 29.67 C ATOM 356 OG SER 34 -2.470 16.063 -0.380 1.00 31.67 O ATOM 358 C SER 34 -0.139 16.081 -2.121 1.00 27.07 C ATOM 359 O SER 34 -0.281 17.106 -1.436 1.00 30.60 O ATOM 360 N ASP 35 0.648 16.045 -3.209 1.00 24.70 N ATOM 362 CA ASP 35 1.335 17.248 -3.722 1.00 26.78 C ATOM 363 CB ASP 35 2.854 17.012 -3.943 1.00 29.39 C ATOM 364 CG ASP 35 3.179 16.196 -5.204 1.00 28.60 C ATOM 365 OD1 ASP 35 3.117 14.948 -5.149 1.00 30.82 O ATOM 366 OD2 ASP 35 3.515 16.811 -6.237 1.00 30.09 O ATOM 367 C ASP 35 0.659 17.792 -4.998 1.00 25.65 C ATOM 368 O ASP 35 0.466 19.002 -5.126 1.00 30.38 O ATOM 369 N THR 36 0.282 16.876 -5.904 1.00 23.81 N ATOM 371 CA THR 36 -0.366 17.185 -7.193 1.00 26.96 C ATOM 372 CB THR 36 0.426 16.558 -8.389 1.00 28.09 C ATOM 373 OG1 THR 36 0.789 15.208 -8.075 1.00 30.16 O ATOM 375 CG2 THR 36 1.669 17.369 -8.703 1.00 31.44 C ATOM 376 C THR 36 -1.835 16.727 -7.257 1.00 26.12 C ATOM 377 O THR 36 -2.372 16.205 -6.277 1.00 28.09 O ATOM 378 N LYS 37 -2.476 16.983 -8.406 1.00 27.36 N ATOM 380 CA LYS 37 -3.868 16.616 -8.726 1.00 27.78 C ATOM 381 CB LYS 37 -4.427 17.531 -9.824 1.00 29.46 C ATOM 382 CG LYS 37 -4.646 18.971 -9.382 1.00 29.19 C ATOM 383 CD LYS 37 -5.201 19.819 -10.516 1.00 30.60 C ATOM 384 CE LYS 37 -5.422 21.255 -10.074 1.00 30.90 C ATOM 385 NZ LYS 37 -5.965 22.098 -11.176 1.00 32.57 N ATOM 389 C LYS 37 -3.913 15.130 -9.141 1.00 26.84 C ATOM 390 O LYS 37 -2.855 14.539 -9.388 1.00 28.66 O ATOM 391 N TYR 38 -5.115 14.560 -9.301 1.00 28.99 N ATOM 393 CA TYR 38 -5.295 13.130 -9.637 1.00 27.84 C ATOM 394 CB TYR 38 -6.762 12.699 -9.349 1.00 29.60 C ATOM 395 CG TYR 38 -7.040 11.194 -9.204 1.00 28.92 C ATOM 396 CD1 TYR 38 -7.406 10.407 -10.324 1.00 29.46 C ATOM 397 CE1 TYR 38 -7.696 9.020 -10.190 1.00 30.31 C ATOM 398 CD2 TYR 38 -6.972 10.555 -7.941 1.00 30.02 C ATOM 399 CE2 TYR 38 -7.259 9.169 -7.798 1.00 28.99 C ATOM 400 CZ TYR 38 -7.619 8.414 -8.926 1.00 28.34 C ATOM 401 OH TYR 38 -7.898 7.072 -8.794 1.00 30.90 O ATOM 403 C TYR 38 -4.934 12.911 -11.129 1.00 25.96 C ATOM 404 O TYR 38 -4.861 13.883 -11.891 1.00 28.66 O ATOM 405 N THR 39 -4.735 11.644 -11.526 1.00 26.39 N ATOM 407 CA THR 39 -4.284 11.267 -12.884 1.00 26.56 C ATOM 408 CB THR 39 -3.503 9.878 -12.860 1.00 28.92 C ATOM 409 OG1 THR 39 -3.109 9.508 -14.188 1.00 29.74 O ATOM 411 CG2 THR 39 -4.338 8.741 -12.224 1.00 30.45 C ATOM 412 C THR 39 -5.358 11.283 -14.006 1.00 24.84 C ATOM 413 O THR 39 -6.548 11.067 -13.746 1.00 28.47 O ATOM 414 N LEU 40 -4.888 11.532 -15.240 1.00 26.01 N ATOM 416 CA LEU 40 -5.691 11.641 -16.480 1.00 26.56 C ATOM 417 CB LEU 40 -4.835 12.272 -17.606 1.00 28.22 C ATOM 418 CG LEU 40 -4.251 13.694 -17.481 1.00 28.86 C ATOM 419 CD1 LEU 40 -2.797 13.683 -17.930 1.00 31.99 C ATOM 420 CD2 LEU 40 -5.056 14.717 -18.296 1.00 31.83 C ATOM 421 C LEU 40 -6.316 10.326 -16.986 1.00 26.50 C ATOM 422 O LEU 40 -5.860 9.237 -16.616 1.00 29.19 O ATOM 423 N CYS 41 -7.345 10.454 -17.840 1.00 26.96 N ATOM 425 CA CYS 41 -8.088 9.329 -18.437 1.00 27.97 C ATOM 426 CB CYS 41 -9.492 9.788 -18.856 1.00 31.44 C ATOM 427 SG CYS 41 -10.445 10.581 -17.538 1.00 31.83 S ATOM 428 C CYS 41 -7.354 8.690 -19.623 1.00 28.73 C ATOM 429 O CYS 41 -7.065 7.479 -19.532 1.00 31.13 O ATOM 430 OXT CYS 41 -7.036 9.405 -20.599 1.00 32.32 O TER END