####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 327), selected 41 , name T0955TS348_1 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS348_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 37 1 - 37 4.98 5.35 LCS_AVERAGE: 89.83 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 26 - 32 1.67 14.62 LONGEST_CONTINUOUS_SEGMENT: 7 28 - 34 1.89 14.05 LCS_AVERAGE: 14.57 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 4 18 - 21 1.00 11.94 LONGEST_CONTINUOUS_SEGMENT: 4 28 - 31 0.91 14.26 LONGEST_CONTINUOUS_SEGMENT: 4 29 - 32 0.67 14.41 LONGEST_CONTINUOUS_SEGMENT: 4 38 - 41 0.68 14.18 LCS_AVERAGE: 8.09 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 6 37 0 3 3 5 5 8 11 16 20 25 29 33 35 38 38 40 41 41 41 41 LCS_GDT Q 2 Q 2 3 6 37 1 3 3 5 5 8 11 13 18 23 29 33 35 38 38 40 41 41 41 41 LCS_GDT E 3 E 3 3 6 37 0 3 3 5 5 8 11 13 20 25 29 33 35 38 38 40 41 41 41 41 LCS_GDT T 4 T 4 3 6 37 1 3 3 5 5 8 13 15 18 23 29 33 35 38 38 40 41 41 41 41 LCS_GDT R 5 R 5 3 6 37 2 3 4 7 9 12 14 17 20 26 29 33 35 38 38 40 41 41 41 41 LCS_GDT K 6 K 6 3 6 37 0 3 4 7 9 12 17 22 24 27 29 33 35 38 38 40 41 41 41 41 LCS_GDT K 7 K 7 3 4 37 3 3 4 7 9 12 17 22 24 27 29 33 35 38 38 40 41 41 41 41 LCS_GDT C 8 C 8 3 5 37 3 3 4 5 6 9 15 15 17 21 24 30 35 38 38 40 41 41 41 41 LCS_GDT T 9 T 9 3 5 37 3 5 7 8 10 12 17 22 24 27 29 33 35 38 38 40 41 41 41 41 LCS_GDT E 10 E 10 3 5 37 1 3 7 8 10 12 17 22 24 27 29 33 35 38 38 40 41 41 41 41 LCS_GDT M 11 M 11 3 5 37 2 4 7 8 10 12 17 22 24 27 29 33 35 38 38 40 41 41 41 41 LCS_GDT K 12 K 12 3 5 37 2 5 7 8 10 12 17 22 24 27 29 33 35 38 38 40 41 41 41 41 LCS_GDT K 13 K 13 3 5 37 1 3 5 5 7 12 14 19 24 27 29 33 35 38 38 40 41 41 41 41 LCS_GDT K 14 K 14 3 6 37 1 3 4 9 12 14 16 22 24 27 29 33 35 38 38 40 41 41 41 41 LCS_GDT F 15 F 15 3 6 37 2 3 5 9 12 14 17 22 24 27 29 33 35 38 38 40 41 41 41 41 LCS_GDT K 16 K 16 3 6 37 3 3 5 7 12 14 17 22 24 27 29 33 35 38 38 40 41 41 41 41 LCS_GDT N 17 N 17 3 6 37 3 3 5 7 9 12 16 20 24 27 29 33 35 38 38 40 41 41 41 41 LCS_GDT C 18 C 18 4 6 37 3 3 4 6 9 12 14 19 24 27 29 31 35 38 38 40 41 41 41 41 LCS_GDT E 19 E 19 4 6 37 1 3 5 6 9 12 17 22 24 27 29 33 35 38 38 40 41 41 41 41 LCS_GDT V 20 V 20 4 6 37 1 3 4 5 8 11 16 20 24 27 29 33 35 38 38 40 41 41 41 41 LCS_GDT R 21 R 21 4 6 37 0 3 4 9 12 14 17 22 24 27 29 33 35 38 38 40 41 41 41 41 LCS_GDT C 22 C 22 3 6 37 1 3 5 9 12 14 16 21 24 27 29 33 35 38 38 40 41 41 41 41 LCS_GDT D 23 D 23 3 6 37 1 3 5 9 12 14 17 22 24 27 29 33 35 38 38 40 41 41 41 41 LCS_GDT E 24 E 24 3 6 37 0 3 5 9 12 14 16 22 24 27 29 33 35 38 38 40 41 41 41 41 LCS_GDT S 25 S 25 3 6 37 3 5 7 9 12 14 17 22 24 27 29 33 35 38 38 40 41 41 41 41 LCS_GDT N 26 N 26 3 7 37 3 3 4 6 9 10 13 22 24 27 29 33 35 38 38 40 41 41 41 41 LCS_GDT H 27 H 27 3 7 37 3 5 7 8 12 14 17 22 24 27 29 33 35 38 38 40 41 41 41 41 LCS_GDT C 28 C 28 4 7 37 3 3 5 9 11 14 17 22 24 27 29 33 35 38 38 40 41 41 41 41 LCS_GDT V 29 V 29 4 7 37 1 4 4 6 8 11 17 22 24 27 29 33 35 38 38 40 41 41 41 41 LCS_GDT E 30 E 30 4 7 37 3 4 4 6 8 11 16 17 21 25 29 33 35 38 38 40 41 41 41 41 LCS_GDT V 31 V 31 4 7 37 3 4 4 6 8 11 16 17 21 25 29 33 35 38 38 40 41 41 41 41 LCS_GDT R 32 R 32 4 7 37 3 4 4 6 8 10 12 15 17 20 22 26 29 35 37 40 41 41 41 41 LCS_GDT C 33 C 33 3 7 37 1 3 3 5 6 9 12 16 20 25 29 33 35 38 38 40 41 41 41 41 LCS_GDT S 34 S 34 3 7 37 3 3 3 5 7 9 12 15 17 20 22 26 29 32 37 39 41 41 41 41 LCS_GDT D 35 D 35 3 4 37 3 3 3 4 4 8 12 15 19 25 29 33 35 37 38 40 41 41 41 41 LCS_GDT T 36 T 36 3 6 37 3 3 5 9 11 14 17 22 24 27 29 33 35 38 38 40 41 41 41 41 LCS_GDT K 37 K 37 3 6 37 2 4 7 9 12 14 17 22 24 27 29 33 35 38 38 40 41 41 41 41 LCS_GDT Y 38 Y 38 4 6 36 0 4 4 8 12 14 17 22 24 27 29 33 35 38 38 40 41 41 41 41 LCS_GDT T 39 T 39 4 6 36 3 5 7 8 12 14 17 22 24 27 29 33 35 38 38 40 41 41 41 41 LCS_GDT L 40 L 40 4 6 36 3 4 4 6 8 12 16 21 24 27 29 31 35 38 38 40 41 41 41 41 LCS_GDT C 41 C 41 4 6 33 3 4 4 8 10 12 16 21 24 27 29 31 32 38 38 40 41 41 41 41 LCS_AVERAGE LCS_A: 37.50 ( 8.09 14.57 89.83 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 3 5 7 9 12 14 17 22 24 27 29 33 35 38 38 40 41 41 41 41 GDT PERCENT_AT 7.32 12.20 17.07 21.95 29.27 34.15 41.46 53.66 58.54 65.85 70.73 80.49 85.37 92.68 92.68 97.56 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.16 0.57 0.96 1.56 1.95 2.13 2.84 3.19 3.28 3.51 3.72 4.41 4.60 4.80 4.80 5.07 5.24 5.24 5.24 5.24 GDT RMS_ALL_AT 15.33 6.87 6.72 6.42 6.46 6.34 6.13 5.79 6.06 6.04 6.35 5.31 5.26 5.38 5.38 5.26 5.24 5.24 5.24 5.24 # Checking swapping # possible swapping detected: E 3 E 3 # possible swapping detected: E 10 E 10 # possible swapping detected: E 24 E 24 # possible swapping detected: E 30 E 30 # possible swapping detected: D 35 D 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 9.353 0 0.294 0.318 11.051 0.000 0.000 7.421 LGA Q 2 Q 2 9.292 0 0.097 1.368 10.108 0.000 0.000 6.715 LGA E 3 E 3 9.013 0 0.436 1.337 14.821 0.000 0.000 12.907 LGA T 4 T 4 8.627 0 0.421 1.352 11.335 0.000 0.000 11.335 LGA R 5 R 5 5.926 2 0.541 0.968 8.677 0.000 0.000 - LGA K 6 K 6 3.582 0 0.425 1.417 6.837 12.273 7.879 6.837 LGA K 7 K 7 3.796 0 0.261 0.674 5.632 10.000 6.465 5.632 LGA C 8 C 8 6.995 0 0.543 0.887 12.356 0.000 0.000 12.356 LGA T 9 T 9 3.345 0 0.500 1.309 4.562 29.545 22.338 3.367 LGA E 10 E 10 2.447 0 0.187 1.229 5.707 32.727 21.414 5.707 LGA M 11 M 11 1.223 0 0.398 1.197 6.251 48.636 41.136 6.251 LGA K 12 K 12 3.244 0 0.445 0.733 9.420 14.545 6.465 9.420 LGA K 13 K 13 5.397 0 0.504 1.328 10.867 4.091 1.818 10.867 LGA K 14 K 14 3.927 0 0.435 1.764 11.818 15.000 6.667 11.818 LGA F 15 F 15 3.048 0 0.176 0.415 6.218 25.000 14.711 5.713 LGA K 16 K 16 3.186 0 0.315 1.213 4.204 16.364 13.939 2.679 LGA N 17 N 17 6.009 0 0.595 0.636 9.013 0.455 0.227 9.013 LGA C 18 C 18 7.000 0 0.416 0.462 10.999 0.000 0.000 10.999 LGA E 19 E 19 3.764 0 0.133 0.685 4.543 9.545 12.525 4.310 LGA V 20 V 20 5.432 0 0.359 0.302 7.644 0.455 0.260 7.522 LGA R 21 R 21 3.664 2 0.622 0.918 5.953 7.273 14.050 - LGA C 22 C 22 4.579 0 0.450 1.028 8.255 8.636 5.758 8.255 LGA D 23 D 23 2.507 0 0.403 0.528 3.391 30.455 39.318 2.272 LGA E 24 E 24 3.737 0 0.086 0.550 6.955 15.455 7.677 6.955 LGA S 25 S 25 2.000 0 0.139 0.194 2.762 38.182 36.364 2.762 LGA N 26 N 26 4.347 0 0.326 1.156 8.400 17.273 8.636 6.145 LGA H 27 H 27 2.749 0 0.389 0.407 8.606 26.818 10.727 8.004 LGA C 28 C 28 2.783 0 0.605 0.557 7.648 36.818 24.545 7.648 LGA V 29 V 29 3.494 0 0.551 1.286 6.252 21.364 15.325 3.673 LGA E 30 E 30 6.069 0 0.073 1.371 13.204 0.000 0.000 13.204 LGA V 31 V 31 6.389 0 0.032 1.093 7.430 0.000 1.039 4.497 LGA R 32 R 32 10.673 2 0.269 1.030 17.966 0.000 0.000 - LGA C 33 C 33 8.178 0 0.239 0.983 9.401 0.000 0.909 4.019 LGA S 34 S 34 12.553 0 0.451 0.433 14.640 0.000 0.000 13.993 LGA D 35 D 35 10.422 0 0.590 0.921 12.352 0.000 0.000 12.022 LGA T 36 T 36 3.766 0 0.528 0.905 5.952 25.000 29.610 1.599 LGA K 37 K 37 2.735 0 0.283 1.400 7.827 30.000 13.535 7.827 LGA Y 38 Y 38 2.723 1 0.476 0.621 8.098 35.909 12.424 - LGA T 39 T 39 2.213 0 0.207 0.243 3.951 35.455 27.273 3.951 LGA L 40 L 40 4.666 0 0.171 0.346 8.905 3.182 1.591 5.365 LGA C 41 C 41 4.991 1 0.418 0.503 7.921 1.818 12.987 1.287 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 327 97.61 41 37 SUMMARY(RMSD_GDC): 5.239 5.225 6.342 13.470 10.186 7.174 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 22 3.19 46.341 39.395 0.669 LGA_LOCAL RMSD: 3.188 Number of atoms: 22 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.787 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 5.239 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.287481 * X + 0.411620 * Y + -0.864826 * Z + -0.030599 Y_new = 0.942034 * X + -0.041572 * Y + -0.332933 * Z + -21.412973 Z_new = -0.172994 * X + -0.910407 * Y + -0.375809 * Z + 9.628530 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.866990 0.173869 -1.962282 [DEG: 106.9706 9.9619 -112.4305 ] ZXZ: -1.203313 1.956066 -2.953813 [DEG: -68.9448 112.0743 -169.2410 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS348_1 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS348_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 22 3.19 39.395 5.24 REMARK ---------------------------------------------------------- MOLECULE T0955TS348_1 PFRMAT TS TARGET T0955 MODEL 1 PARENT N/A ATOM 1 N SER 1 -1.290 -17.751 9.282 1.00 3.28 ATOM 2 CA SER 1 -1.624 -16.485 8.635 1.00 2.95 ATOM 3 C SER 1 -2.368 -15.561 9.593 1.00 2.60 ATOM 4 O SER 1 -3.566 -15.341 9.432 1.00 3.63 ATOM 5 CB SER 1 -2.474 -16.733 7.387 1.00 4.38 ATOM 6 OG SER 1 -1.742 -17.502 6.444 1.00 6.36 ATOM 7 N GLN 2 -1.717 -15.027 10.545 1.00 1.85 ATOM 8 CA GLN 2 -1.588 -13.633 10.833 1.00 2.05 ATOM 9 C GLN 2 -0.413 -13.161 10.181 1.00 2.29 ATOM 10 O GLN 2 -0.055 -11.994 10.326 1.00 4.42 ATOM 11 CB GLN 2 -1.499 -13.362 12.337 1.00 3.42 ATOM 12 CG GLN 2 -2.737 -13.876 13.074 1.00 4.44 ATOM 13 CD GLN 2 -4.006 -13.229 12.531 1.00 7.08 ATOM 14 NE2 GLN 2 -4.996 -14.021 12.175 1.00 7.77 ATOM 15 OE1 GLN 2 -4.101 -12.015 12.430 1.00 8.81 ATOM 16 N GLU 3 0.308 -13.982 9.399 1.00 1.66 ATOM 17 CA GLU 3 1.305 -13.285 8.659 1.00 1.52 ATOM 18 C GLU 3 0.798 -13.331 7.242 1.00 1.08 ATOM 19 O GLU 3 -0.220 -12.716 6.930 1.00 1.52 ATOM 20 CB GLU 3 2.700 -13.913 8.739 1.00 3.65 ATOM 21 CG GLU 3 3.123 -14.153 10.189 1.00 6.15 ATOM 22 CD GLU 3 4.541 -14.708 10.259 1.00 8.52 ATOM 23 OE1 GLU 3 5.157 -14.866 9.201 1.00 8.14 ATOM 24 OE2 GLU 3 5.002 -14.973 11.375 1.00 10.72 ATOM 25 N THR 4 1.535 -14.055 6.504 1.00 2.71 ATOM 26 CA THR 4 1.448 -13.892 4.979 1.00 3.64 ATOM 27 C THR 4 1.675 -12.429 4.790 1.00 2.33 ATOM 28 O THR 4 1.013 -11.804 3.965 1.00 4.30 ATOM 29 CB THR 4 0.096 -14.292 4.356 1.00 5.96 ATOM 30 OG1 THR 4 -0.384 -15.465 4.999 1.00 7.08 ATOM 31 CG2 THR 4 0.234 -14.573 2.862 1.00 7.90 ATOM 32 N ARG 5 2.614 -11.967 5.568 1.00 0.60 ATOM 33 CA ARG 5 2.577 -10.574 5.809 1.00 1.09 ATOM 34 C ARG 5 3.999 -10.260 5.957 1.00 1.40 ATOM 35 O ARG 5 4.473 -10.061 7.073 1.00 2.98 ATOM 36 CB ARG 5 1.814 -10.153 7.067 1.00 3.25 ATOM 37 CG ARG 5 1.692 -8.632 7.171 1.00 5.50 ATOM 38 CD ARG 5 1.175 -8.223 8.550 1.00 7.73 ATOM 39 NE ARG 5 0.736 -6.813 8.521 1.00 8.60 ATOM 40 CZ ARG 5 -0.525 -6.471 8.315 1.00 9.11 ATOM 41 N LYS 6 4.803 -10.172 4.969 1.00 1.89 ATOM 42 CA LYS 6 5.626 -9.013 4.697 1.00 1.01 ATOM 43 C LYS 6 5.216 -8.688 3.373 1.00 1.20 ATOM 44 O LYS 6 4.043 -8.401 3.143 1.00 3.01 ATOM 45 CB LYS 6 7.138 -9.259 4.736 1.00 2.26 ATOM 46 CG LYS 6 7.620 -9.569 6.153 1.00 0.67 ATOM 47 CD LYS 6 7.426 -8.360 7.068 1.00 2.85 ATOM 48 CE LYS 6 7.908 -8.671 8.484 1.00 3.52 ATOM 49 NZ LYS 6 7.124 -9.801 9.050 1.00 4.17 ATOM 50 N LYS 7 6.073 -8.709 2.456 1.00 1.28 ATOM 51 CA LYS 7 5.722 -7.852 1.289 1.00 2.02 ATOM 52 C LYS 7 5.460 -6.400 1.953 1.00 2.62 ATOM 53 O LYS 7 4.839 -5.542 1.331 1.00 3.98 ATOM 54 CB LYS 7 4.479 -8.314 0.522 1.00 1.78 ATOM 55 CG LYS 7 4.788 -9.509 -0.380 1.00 2.21 ATOM 56 CD LYS 7 3.596 -9.825 -1.285 1.00 2.93 ATOM 57 CE LYS 7 3.961 -10.909 -2.299 1.00 3.60 ATOM 58 NZ LYS 7 2.821 -11.141 -3.224 1.00 5.50 ATOM 59 N CYS 8 5.994 -6.280 3.199 1.00 2.00 ATOM 60 CA CYS 8 6.845 -5.301 3.675 1.00 0.90 ATOM 61 C CYS 8 6.194 -4.122 3.209 1.00 0.86 ATOM 62 O CYS 8 6.694 -3.458 2.303 1.00 2.16 ATOM 63 CB CYS 8 8.274 -5.357 3.131 1.00 2.08 ATOM 64 SG CYS 8 9.167 -6.816 3.723 1.00 3.36 ATOM 65 N THR 9 4.988 -3.830 3.880 1.00 1.78 ATOM 66 CA THR 9 4.456 -2.609 3.516 1.00 0.81 ATOM 67 C THR 9 5.356 -1.725 4.178 1.00 1.07 ATOM 68 O THR 9 4.933 -0.921 5.006 1.00 2.36 ATOM 69 CB THR 9 3.015 -2.329 3.986 1.00 1.86 ATOM 70 OG1 THR 9 3.006 -2.187 5.399 1.00 4.46 ATOM 71 CG2 THR 9 2.075 -3.469 3.602 1.00 0.99 ATOM 72 N GLU 10 6.676 -1.927 3.739 1.00 1.31 ATOM 73 CA GLU 10 7.714 -1.043 3.530 1.00 0.96 ATOM 74 C GLU 10 7.172 -0.189 2.346 1.00 1.31 ATOM 75 O GLU 10 7.777 0.817 1.983 1.00 3.17 ATOM 76 CB GLU 10 9.049 -1.687 3.146 1.00 1.87 ATOM 77 CG GLU 10 9.720 -2.345 4.352 1.00 1.56 ATOM 78 CD GLU 10 10.427 -1.307 5.218 1.00 0.60 ATOM 79 OE1 GLU 10 9.735 -0.461 5.790 1.00 1.35 ATOM 80 OE2 GLU 10 11.659 -1.369 5.302 1.00 1.09 ATOM 81 N MET 11 5.979 -0.609 1.730 1.00 0.58 ATOM 82 CA MET 11 5.082 0.429 1.563 1.00 1.03 ATOM 83 C MET 11 4.488 0.664 2.980 1.00 0.60 ATOM 84 O MET 11 3.270 0.691 3.141 1.00 1.16 ATOM 85 CB MET 11 3.959 0.115 0.571 1.00 1.42 ATOM 86 CG MET 11 3.033 1.315 0.379 1.00 1.53 ATOM 87 SD MET 11 1.715 0.952 -0.803 1.00 1.17 ATOM 88 CE MET 11 0.854 2.534 -0.755 1.00 3.29 ATOM 89 N LYS 12 5.520 0.831 3.947 1.00 1.11 ATOM 90 CA LYS 12 5.569 2.041 4.828 1.00 1.11 ATOM 91 C LYS 12 6.288 3.028 3.906 1.00 1.09 ATOM 92 O LYS 12 7.326 3.573 4.276 1.00 1.87 ATOM 93 CB LYS 12 6.348 1.877 6.137 1.00 1.72 ATOM 94 CG LYS 12 5.683 0.858 7.063 1.00 2.16 ATOM 95 CD LYS 12 6.493 0.688 8.349 1.00 2.93 ATOM 96 CE LYS 12 5.883 -0.402 9.230 1.00 3.45 ATOM 97 NZ LYS 12 6.692 -0.567 10.466 1.00 4.21 ATOM 98 N LYS 13 5.590 3.179 2.678 1.00 0.96 ATOM 99 CA LYS 13 5.161 4.330 1.984 1.00 1.48 ATOM 100 C LYS 13 4.050 4.725 2.783 1.00 1.67 ATOM 101 O LYS 13 2.927 4.786 2.289 1.00 2.74 ATOM 102 CB LYS 13 4.715 4.101 0.537 1.00 2.21 ATOM 103 CG LYS 13 5.892 3.707 -0.358 1.00 3.11 ATOM 104 CD LYS 13 6.897 4.854 -0.465 1.00 5.21 ATOM 105 CE LYS 13 7.592 5.089 0.875 1.00 6.51 ATOM 106 NZ LYS 13 8.336 3.868 1.282 1.00 6.79 ATOM 107 N LYS 14 4.450 5.007 4.096 1.00 1.72 ATOM 108 CA LYS 14 3.830 5.774 5.069 1.00 0.75 ATOM 109 C LYS 14 3.272 6.911 4.213 1.00 0.57 ATOM 110 O LYS 14 3.494 8.079 4.521 1.00 1.79 ATOM 111 CB LYS 14 4.751 6.336 6.157 1.00 0.28 ATOM 112 CG LYS 14 4.405 7.787 6.492 1.00 2.01 ATOM 113 CD LYS 14 4.709 8.704 5.307 1.00 3.96 ATOM 114 CE LYS 14 5.654 9.830 5.726 1.00 5.68 ATOM 115 NZ LYS 14 5.899 10.739 4.575 1.00 7.64 ATOM 116 N PHE 15 2.573 6.447 3.192 1.00 0.91 ATOM 117 CA PHE 15 1.333 6.809 2.691 1.00 0.72 ATOM 118 C PHE 15 0.423 6.137 3.672 1.00 0.41 ATOM 119 O PHE 15 -0.192 5.123 3.348 1.00 1.18 ATOM 120 CB PHE 15 1.028 6.316 1.273 1.00 1.00 ATOM 121 CG PHE 15 1.739 7.137 0.221 1.00 1.56 ATOM 122 CD1 PHE 15 3.034 6.808 -0.172 1.00 3.49 ATOM 123 CD2 PHE 15 1.103 8.231 -0.363 1.00 0.55 ATOM 124 CE1 PHE 15 3.689 7.567 -1.142 1.00 4.00 ATOM 125 CE2 PHE 15 1.756 8.990 -1.333 1.00 1.04 ATOM 126 CZ PHE 15 3.049 8.657 -1.721 1.00 2.66 ATOM 127 N LYS 16 0.404 6.784 4.834 1.00 1.09 ATOM 128 CA LYS 16 -0.762 6.897 5.617 1.00 1.50 ATOM 129 C LYS 16 -1.655 7.724 4.673 1.00 1.64 ATOM 130 O LYS 16 -2.393 8.595 5.127 1.00 2.70 ATOM 131 CB LYS 16 -0.595 7.622 6.956 1.00 1.62 ATOM 132 CG LYS 16 0.173 6.770 7.966 1.00 1.87 ATOM 133 CD LYS 16 0.466 7.569 9.236 1.00 1.88 ATOM 134 CE LYS 16 1.078 6.669 10.309 1.00 2.29 ATOM 135 NZ LYS 16 1.671 7.501 11.391 1.00 2.25 ATOM 136 N ASN 17 -1.501 7.337 3.312 1.00 1.49 ATOM 137 CA ASN 17 -2.582 7.023 2.509 1.00 0.65 ATOM 138 C ASN 17 -3.018 5.726 2.925 1.00 0.35 ATOM 139 O ASN 17 -2.443 4.722 2.513 1.00 1.04 ATOM 140 CB ASN 17 -2.243 7.012 1.015 1.00 0.85 ATOM 141 CG ASN 17 -2.074 8.428 0.477 1.00 1.42 ATOM 142 ND2 ASN 17 -1.015 8.677 -0.266 1.00 2.29 ATOM 143 OD1 ASN 17 -2.893 9.301 0.728 1.00 1.16 ATOM 144 N CYS 18 -4.080 5.805 3.768 1.00 0.76 ATOM 145 CA CYS 18 -5.037 4.827 3.965 1.00 1.14 ATOM 146 C CYS 18 -5.779 4.909 2.676 1.00 1.38 ATOM 147 O CYS 18 -6.992 5.110 2.675 1.00 2.41 ATOM 148 CB CYS 18 -5.993 5.066 5.134 1.00 1.98 ATOM 149 SG CYS 18 -5.151 4.952 6.732 1.00 1.67 ATOM 150 N GLU 19 -4.926 4.726 1.596 1.00 1.07 ATOM 151 CA GLU 19 -5.537 4.258 0.445 1.00 1.01 ATOM 152 C GLU 19 -5.555 2.854 0.695 1.00 1.40 ATOM 153 O GLU 19 -4.914 2.091 -0.023 1.00 3.00 ATOM 154 CB GLU 19 -4.793 4.550 -0.861 1.00 2.13 ATOM 155 CG GLU 19 -4.671 6.054 -1.112 1.00 2.63 ATOM 156 CD GLU 19 -3.823 6.334 -2.348 1.00 3.22 ATOM 157 OE1 GLU 19 -3.411 5.372 -3.001 1.00 3.51 ATOM 158 OE2 GLU 19 -3.593 7.514 -2.634 1.00 3.91 ATOM 159 N VAL 20 -6.372 2.547 1.803 1.00 0.65 ATOM 160 CA VAL 20 -6.587 1.173 1.994 1.00 1.36 ATOM 161 C VAL 20 -7.825 0.904 0.999 1.00 1.91 ATOM 162 O VAL 20 -8.719 0.126 1.324 1.00 4.00 ATOM 163 CB VAL 20 -6.959 0.745 3.431 1.00 2.77 ATOM 164 CG1 VAL 20 -6.956 -0.778 3.555 1.00 5.22 ATOM 165 CG2 VAL 20 -5.954 1.314 4.432 1.00 5.01 ATOM 166 N ARG 21 -7.703 1.589 -0.094 1.00 0.84 ATOM 167 CA ARG 21 -7.746 1.164 -1.417 1.00 0.75 ATOM 168 C ARG 21 -7.863 -0.212 -1.568 1.00 1.73 ATOM 169 O ARG 21 -8.072 -0.695 -2.678 1.00 3.72 ATOM 170 CB ARG 21 -6.489 1.664 -2.133 1.00 1.31 ATOM 171 CG ARG 21 -6.478 1.255 -3.607 1.00 0.93 ATOM 172 CD ARG 21 -5.215 1.764 -4.300 1.00 3.28 ATOM 173 NE ARG 21 -5.227 3.242 -4.335 1.00 4.10 ATOM 174 CZ ARG 21 -4.288 3.940 -4.949 1.00 5.80 ATOM 175 N CYS 22 -7.765 -1.055 -0.547 1.00 0.95 ATOM 176 CA CYS 22 -8.749 -2.127 -0.324 1.00 0.45 ATOM 177 C CYS 22 -8.771 -2.753 -1.658 1.00 1.30 ATOM 178 O CYS 22 -9.843 -3.047 -2.183 1.00 2.35 ATOM 179 CB CYS 22 -10.155 -1.663 0.058 1.00 0.85 ATOM 180 SG CYS 22 -11.173 -3.026 0.677 1.00 2.76 ATOM 181 N ASP 23 -7.662 -3.002 -2.282 1.00 1.57 ATOM 182 CA ASP 23 -7.633 -4.205 -3.044 1.00 1.04 ATOM 183 C ASP 23 -7.374 -5.226 -1.948 1.00 1.19 ATOM 184 O ASP 23 -6.253 -5.713 -1.810 1.00 2.15 ATOM 185 CB ASP 23 -6.536 -4.289 -4.110 1.00 1.18 ATOM 186 CG ASP 23 -6.764 -3.271 -5.224 1.00 1.26 ATOM 187 OD1 ASP 23 -6.022 -2.284 -5.272 1.00 3.36 ATOM 188 OD2 ASP 23 -7.937 -3.786 -6.040 1.00 1.20 ATOM 189 N GLU 24 -8.423 -5.457 -1.284 1.00 0.45 ATOM 190 CA GLU 24 -8.965 -6.687 -0.749 1.00 1.00 ATOM 191 C GLU 24 -9.248 -7.604 -2.040 1.00 1.75 ATOM 192 O GLU 24 -9.481 -8.803 -1.906 1.00 3.76 ATOM 193 CB GLU 24 -10.256 -6.494 0.052 1.00 1.23 ATOM 194 CG GLU 24 -11.416 -6.070 -0.849 1.00 2.31 ATOM 195 CD GLU 24 -12.705 -5.923 -0.047 1.00 2.52 ATOM 196 OE1 GLU 24 -13.692 -5.449 -0.616 1.00 2.56 ATOM 197 OE2 GLU 24 -12.694 -6.286 1.134 1.00 2.71 ATOM 198 N SER 25 -9.176 -6.840 -3.239 1.00 0.30 ATOM 199 CA SER 25 -8.585 -7.338 -4.561 1.00 1.30 ATOM 200 C SER 25 -7.195 -7.691 -4.598 1.00 1.95 ATOM 201 O SER 25 -6.778 -8.463 -5.459 1.00 4.18 ATOM 202 CB SER 25 -8.873 -6.250 -5.598 1.00 2.37 ATOM 203 OG SER 25 -10.274 -6.113 -5.784 1.00 2.29 ATOM 204 N ASN 26 -6.488 -7.068 -3.580 1.00 1.17 ATOM 205 CA ASN 26 -5.265 -7.681 -3.208 1.00 1.26 ATOM 206 C ASN 26 -4.490 -7.667 -4.568 1.00 1.33 ATOM 207 O ASN 26 -3.833 -8.647 -4.914 1.00 2.73 ATOM 208 CB ASN 26 -5.377 -9.114 -2.680 1.00 1.73 ATOM 209 CG ASN 26 -6.176 -9.165 -1.382 1.00 2.65 ATOM 210 ND2 ASN 26 -7.110 -10.087 -1.273 1.00 2.56 ATOM 211 OD1 ASN 26 -5.956 -8.373 -0.476 1.00 3.69 ATOM 212 N HIS 27 -4.665 -6.430 -5.250 1.00 0.66 ATOM 213 CA HIS 27 -3.542 -5.727 -5.693 1.00 0.64 ATOM 214 C HIS 27 -3.124 -4.921 -4.565 1.00 1.12 ATOM 215 O HIS 27 -3.699 -3.864 -4.317 1.00 2.01 ATOM 216 CB HIS 27 -3.824 -4.831 -6.903 1.00 1.20 ATOM 217 CG HIS 27 -4.232 -5.600 -8.126 1.00 1.56 ATOM 218 ND1 HIS 27 -3.328 -6.181 -8.989 1.00 1.85 ATOM 219 CD2 HIS 27 -5.464 -5.877 -8.626 1.00 2.12 ATOM 220 CE1 HIS 27 -3.992 -6.784 -9.967 1.00 2.47 ATOM 221 NE2 HIS 27 -5.293 -6.614 -9.770 1.00 2.73 ATOM 222 N CYS 28 -2.144 -5.387 -3.890 1.00 0.84 ATOM 223 CA CYS 28 -1.399 -4.518 -3.064 1.00 1.34 ATOM 224 C CYS 28 -0.856 -3.526 -3.947 1.00 1.72 ATOM 225 O CYS 28 -0.642 -2.387 -3.537 1.00 4.04 ATOM 226 CB CYS 28 -0.268 -5.223 -2.313 1.00 2.66 ATOM 227 SG CYS 28 -0.897 -6.358 -1.052 1.00 2.31 ATOM 228 N VAL 29 -0.614 -3.838 -5.129 1.00 0.30 ATOM 229 CA VAL 29 0.326 -3.260 -5.964 1.00 2.08 ATOM 230 C VAL 29 1.755 -3.844 -5.456 1.00 3.09 ATOM 231 O VAL 29 2.393 -4.617 -6.167 1.00 5.21 ATOM 232 CB VAL 29 0.338 -1.715 -5.921 1.00 2.76 ATOM 233 CG1 VAL 29 0.732 -1.222 -4.529 1.00 3.63 ATOM 234 CG2 VAL 29 1.340 -1.162 -6.933 1.00 4.26 ATOM 235 N GLU 30 2.325 -3.506 -4.194 1.00 1.77 ATOM 236 CA GLU 30 2.522 -2.130 -3.660 1.00 0.40 ATOM 237 C GLU 30 3.295 -1.419 -4.829 1.00 1.09 ATOM 238 O GLU 30 4.322 -1.919 -5.282 1.00 2.43 ATOM 239 CB GLU 30 3.338 -2.055 -2.367 1.00 1.30 ATOM 240 CG GLU 30 2.603 -2.717 -1.201 1.00 2.10 ATOM 241 CD GLU 30 2.744 -4.235 -1.258 1.00 3.34 ATOM 242 OE1 GLU 30 2.294 -4.896 -0.317 1.00 4.43 ATOM 243 OE2 GLU 30 3.305 -4.726 -2.244 1.00 4.25 ATOM 244 N VAL 31 2.650 -0.220 -5.209 1.00 1.22 ATOM 245 CA VAL 31 3.545 0.793 -5.497 1.00 1.02 ATOM 246 C VAL 31 4.379 0.972 -4.203 1.00 0.65 ATOM 247 O VAL 31 3.819 1.023 -3.111 1.00 1.21 ATOM 248 CB VAL 31 2.875 2.129 -5.886 1.00 1.65 ATOM 249 CG1 VAL 31 2.048 2.673 -4.722 1.00 4.41 ATOM 250 CG2 VAL 31 3.933 3.167 -6.256 1.00 2.90 ATOM 251 N ARG 32 5.614 1.063 -4.374 1.00 1.14 ATOM 252 CA ARG 32 6.422 1.955 -3.671 1.00 0.75 ATOM 253 C ARG 32 6.358 3.257 -4.273 1.00 2.27 ATOM 254 O ARG 32 7.359 3.970 -4.308 1.00 4.11 ATOM 255 CB ARG 32 7.871 1.464 -3.634 1.00 1.76 ATOM 256 CG ARG 32 8.013 0.186 -2.808 1.00 1.05 ATOM 257 CD ARG 32 7.236 -0.963 -3.450 1.00 1.84 ATOM 258 NE ARG 32 7.368 -2.180 -2.622 1.00 1.99 ATOM 259 CZ ARG 32 6.857 -3.341 -2.989 1.00 4.40 ATOM 260 N CYS 33 5.164 3.781 -4.840 1.00 2.22 ATOM 261 CA CYS 33 4.630 5.040 -4.155 1.00 2.73 ATOM 262 C CYS 33 5.620 6.323 -4.032 1.00 2.04 ATOM 263 O CYS 33 5.164 7.462 -4.107 1.00 3.47 ATOM 264 CB CYS 33 4.161 4.608 -2.764 1.00 4.34 ATOM 265 SG CYS 33 3.440 5.985 -1.835 1.00 7.45 ATOM 266 N SER 34 6.822 5.961 -3.868 1.00 0.68 ATOM 267 CA SER 34 7.910 6.472 -4.549 1.00 0.72 ATOM 268 C SER 34 7.818 5.807 -5.949 1.00 0.61 ATOM 269 O SER 34 8.839 5.603 -6.603 1.00 0.52 ATOM 270 CB SER 34 9.259 6.144 -3.906 1.00 1.49 ATOM 271 OG SER 34 9.368 6.791 -2.648 1.00 2.41 ATOM 272 N ASP 35 6.567 5.427 -6.513 1.00 1.99 ATOM 273 CA ASP 35 5.733 6.335 -7.414 1.00 3.09 ATOM 274 C ASP 35 4.728 7.077 -6.727 1.00 2.43 ATOM 275 O ASP 35 3.713 6.513 -6.324 1.00 3.13 ATOM 276 CB ASP 35 5.096 5.481 -8.514 1.00 5.63 ATOM 277 CG ASP 35 6.153 4.906 -9.453 1.00 7.14 ATOM 278 OD1 ASP 35 5.864 3.900 -10.108 1.00 8.31 ATOM 279 OD2 ASP 35 7.375 5.798 -9.320 1.00 6.83 ATOM 280 N THR 36 4.877 8.309 -6.541 1.00 1.93 ATOM 281 CA THR 36 3.916 8.863 -5.504 1.00 0.69 ATOM 282 C THR 36 2.615 8.887 -6.315 1.00 1.90 ATOM 283 O THR 36 1.594 9.366 -5.827 1.00 4.03 ATOM 284 CB THR 36 4.227 10.278 -4.979 1.00 0.91 ATOM 285 OG1 THR 36 4.249 11.186 -6.073 1.00 2.04 ATOM 286 CG2 THR 36 5.581 10.325 -4.277 1.00 3.69 ATOM 287 N LYS 37 2.793 8.309 -7.584 1.00 1.31 ATOM 288 CA LYS 37 1.836 7.438 -8.074 1.00 1.18 ATOM 289 C LYS 37 1.857 6.127 -7.419 1.00 1.27 ATOM 290 O LYS 37 2.135 5.119 -8.064 1.00 2.91 ATOM 291 CB LYS 37 2.034 7.276 -9.585 1.00 1.91 ATOM 292 CG LYS 37 1.963 8.620 -10.309 1.00 2.41 ATOM 293 CD LYS 37 2.307 8.456 -11.789 1.00 3.31 ATOM 294 CE LYS 37 1.947 9.720 -12.570 1.00 4.02 ATOM 295 NZ LYS 37 2.187 9.506 -14.022 1.00 4.84 ATOM 296 N TYR 38 1.558 5.959 -6.039 1.00 0.39 ATOM 297 CA TYR 38 0.212 5.693 -5.377 1.00 1.35 ATOM 298 C TYR 38 -0.512 5.068 -6.454 1.00 1.87 ATOM 299 O TYR 38 -1.693 5.351 -6.648 1.00 3.10 ATOM 300 CB TYR 38 -0.539 6.940 -4.897 1.00 1.61 ATOM 301 CG TYR 38 -0.930 7.850 -6.042 1.00 1.39 ATOM 302 CD1 TYR 38 -1.586 7.336 -7.163 1.00 1.60 ATOM 303 CD2 TYR 38 -0.639 9.214 -5.989 1.00 2.67 ATOM 304 CE1 TYR 38 -1.945 8.176 -8.219 1.00 2.61 ATOM 305 CE2 TYR 38 -0.998 10.056 -7.044 1.00 3.03 ATOM 306 CZ TYR 38 -1.651 9.534 -8.155 1.00 2.86 ATOM 307 N THR 39 0.156 4.218 -7.161 1.00 1.52 ATOM 308 CA THR 39 -0.220 3.020 -7.749 1.00 0.43 ATOM 309 C THR 39 -0.169 1.819 -6.975 1.00 1.05 ATOM 310 O THR 39 0.688 0.970 -7.210 1.00 2.80 ATOM 311 CB THR 39 0.652 2.861 -9.009 1.00 0.59 ATOM 312 OG1 THR 39 0.730 4.110 -9.682 1.00 2.04 ATOM 313 CG2 THR 39 0.065 1.826 -9.965 1.00 0.79 ATOM 314 N LEU 40 -1.044 1.558 -5.974 1.00 0.38 ATOM 315 CA LEU 40 -1.278 0.192 -5.787 1.00 1.06 ATOM 316 C LEU 40 -1.835 -0.219 -7.144 1.00 1.29 ATOM 317 O LEU 40 -2.687 0.474 -7.696 1.00 1.33 ATOM 318 CB LEU 40 -2.284 -0.144 -4.683 1.00 1.74 ATOM 319 CG LEU 40 -1.615 -0.403 -3.328 1.00 3.85 ATOM 320 CD1 LEU 40 -0.502 0.613 -3.087 1.00 4.98 ATOM 321 CD2 LEU 40 -2.641 -0.283 -2.201 1.00 5.81 ATOM 322 N CYS 41 -1.249 -1.426 -7.587 1.00 1.69 ATOM 323 CA CYS 41 -2.111 -2.164 -8.378 1.00 1.65 ATOM 324 C CYS 41 -3.441 -2.507 -7.513 1.00 2.86 ATOM 325 O CYS 41 -3.529 -2.103 -6.340 1.00 1.97 ATOM 326 CB CYS 41 -1.458 -3.459 -8.865 1.00 3.06 ATOM 327 SG CYS 41 -0.019 -3.138 -9.916 1.00 2.11 TER END