####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS354_1 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS354_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 1.79 1.79 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 1.79 1.79 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 17 - 33 0.93 1.97 LCS_AVERAGE: 35.69 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 41 41 3 3 8 15 27 32 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 15 41 41 9 14 19 25 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 15 41 41 10 14 17 27 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 15 41 41 10 14 20 33 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 15 41 41 10 18 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 15 41 41 10 18 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 15 41 41 10 14 27 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 15 41 41 10 19 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 15 41 41 10 19 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 15 41 41 10 19 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 15 41 41 10 14 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 15 41 41 10 16 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 15 41 41 10 19 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 15 41 41 9 17 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 15 41 41 5 16 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 15 41 41 3 4 9 22 35 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 17 41 41 5 19 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 17 41 41 7 19 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 17 41 41 4 19 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 17 41 41 6 16 26 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 17 41 41 4 18 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 17 41 41 7 19 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 17 41 41 6 19 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 17 41 41 7 19 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 17 41 41 7 19 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 17 41 41 5 18 27 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 17 41 41 6 18 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 17 41 41 4 17 26 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 17 41 41 6 18 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 17 41 41 6 19 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 17 41 41 6 19 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 17 41 41 7 19 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 17 41 41 6 19 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 15 41 41 3 7 22 30 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 11 41 41 3 15 27 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 11 41 41 6 19 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 11 41 41 7 19 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 11 41 41 6 19 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 11 41 41 7 19 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 7 41 41 6 17 27 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 6 41 41 0 5 18 23 31 36 39 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 78.56 ( 35.69 100.00 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 19 28 34 36 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 GDT PERCENT_AT 24.39 46.34 68.29 82.93 87.80 92.68 97.56 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.33 0.73 1.02 1.20 1.31 1.49 1.69 1.79 1.79 1.79 1.79 1.79 1.79 1.79 1.79 1.79 1.79 1.79 1.79 1.79 GDT RMS_ALL_AT 4.18 2.12 1.98 1.93 1.89 1.81 1.79 1.79 1.79 1.79 1.79 1.79 1.79 1.79 1.79 1.79 1.79 1.79 1.79 1.79 # Checking swapping # possible swapping detected: E 3 E 3 # possible swapping detected: E 10 E 10 # possible swapping detected: E 19 E 19 # possible swapping detected: D 23 D 23 # possible swapping detected: E 30 E 30 # possible swapping detected: D 35 D 35 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 4.046 0 0.056 0.674 6.283 5.455 9.091 4.243 LGA Q 2 Q 2 2.778 0 0.206 1.391 3.717 33.636 31.111 2.202 LGA E 3 E 3 2.684 0 0.010 1.478 8.154 32.727 16.566 7.050 LGA T 4 T 4 2.119 0 0.053 1.129 4.319 44.545 43.377 4.319 LGA R 5 R 5 0.713 0 0.058 1.408 9.059 82.273 40.661 9.059 LGA K 6 K 6 0.657 0 0.029 1.265 7.478 86.364 47.677 7.418 LGA K 7 K 7 1.404 0 0.040 1.039 4.144 65.455 47.273 1.765 LGA C 8 C 8 1.591 0 0.043 0.759 4.453 58.182 48.182 4.453 LGA T 9 T 9 1.170 0 0.056 1.040 3.103 65.455 56.623 1.798 LGA E 10 E 10 0.662 0 0.027 0.961 5.016 73.636 45.657 4.962 LGA M 11 M 11 1.747 0 0.039 0.798 2.476 51.364 46.364 1.949 LGA K 12 K 12 2.089 0 0.060 0.620 2.520 38.636 45.657 2.104 LGA K 13 K 13 1.532 0 0.060 0.628 1.652 50.909 60.808 1.172 LGA K 14 K 14 1.598 0 0.056 0.599 3.167 50.909 52.121 3.167 LGA F 15 F 15 1.852 0 0.122 0.586 3.249 54.545 47.603 2.587 LGA K 16 K 16 3.411 0 0.648 1.562 7.633 16.364 9.293 7.633 LGA N 17 N 17 0.481 0 0.250 0.540 2.179 95.455 79.091 2.179 LGA C 18 C 18 0.698 0 0.017 0.025 0.892 81.818 81.818 0.892 LGA E 19 E 19 0.980 0 0.249 0.489 3.426 77.727 57.980 2.053 LGA V 20 V 20 1.975 0 0.152 1.125 3.919 47.727 39.740 2.249 LGA R 21 R 21 1.481 0 0.018 1.291 3.659 61.818 45.289 3.063 LGA C 22 C 22 1.334 0 0.081 0.878 4.465 61.818 50.606 4.465 LGA D 23 D 23 1.337 0 0.299 1.051 4.455 45.000 37.045 3.362 LGA E 24 E 24 1.554 0 0.075 0.551 4.096 54.545 42.020 1.839 LGA S 25 S 25 1.802 0 0.066 0.098 2.080 50.909 48.788 2.080 LGA N 26 N 26 1.743 0 0.053 1.175 4.972 50.909 40.227 4.972 LGA H 27 H 27 0.999 0 0.082 0.269 2.084 73.636 66.182 1.928 LGA C 28 C 28 1.345 0 0.182 0.782 2.545 69.545 59.394 2.545 LGA V 29 V 29 0.725 0 0.085 1.072 3.534 77.727 64.675 1.274 LGA E 30 E 30 1.191 0 0.062 0.551 2.760 69.545 55.354 2.760 LGA V 31 V 31 1.114 0 0.118 0.154 1.306 65.455 65.455 1.053 LGA R 32 R 32 0.971 0 0.128 1.032 8.218 82.273 42.810 8.218 LGA C 33 C 33 0.230 0 0.487 0.551 2.404 75.455 74.848 1.059 LGA S 34 S 34 2.316 0 0.539 0.815 4.760 29.545 30.606 2.398 LGA D 35 D 35 2.029 0 0.203 1.032 5.512 44.545 31.591 5.512 LGA T 36 T 36 1.907 0 0.228 1.127 2.878 47.727 42.338 2.878 LGA K 37 K 37 0.769 0 0.078 1.253 4.256 77.727 66.061 4.256 LGA Y 38 Y 38 1.025 0 0.030 1.323 4.965 73.636 47.727 4.965 LGA T 39 T 39 0.656 0 0.111 0.103 1.879 70.000 70.390 1.017 LGA L 40 L 40 1.750 0 0.206 0.987 3.742 58.182 40.909 2.870 LGA C 41 C 41 3.918 0 0.324 0.556 7.362 20.909 15.844 7.362 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 1.788 1.844 2.710 57.905 47.435 28.160 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 41 1.79 82.317 90.811 2.172 LGA_LOCAL RMSD: 1.788 Number of atoms: 41 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 1.788 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 1.788 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.532317 * X + -0.195927 * Y + 0.823560 * Z + -6.964276 Y_new = 0.206051 * X + 0.973578 * Y + 0.098433 * Z + -26.238234 Z_new = -0.821086 * X + 0.117297 * Y + 0.558623 * Z + -5.501768 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.369321 0.963310 0.206969 [DEG: 21.1605 55.1936 11.8585 ] ZXZ: 1.689754 0.978072 -1.428900 [DEG: 96.8157 56.0394 -81.8699 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS354_1 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS354_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 41 1.79 90.811 1.79 REMARK ---------------------------------------------------------- MOLECULE T0955TS354_1 PFRMAT TS TARGET T0955 MODEL 1 PARENT N/A ATOM 1 N SER 1 -4.350 -12.890 0.701 1.00 0.73 ATOM 2 CA SER 1 -3.346 -13.618 1.472 1.00 0.73 ATOM 3 C SER 1 -2.553 -12.693 2.382 1.00 0.73 ATOM 4 O SER 1 -2.307 -11.527 2.052 1.00 0.73 ATOM 5 CB SER 1 -2.373 -14.336 0.544 1.00 0.73 ATOM 6 OG SER 1 -1.542 -13.434 -0.188 1.00 0.73 ATOM 14 N GLN 2 -2.025 -13.248 3.468 1.00 4.83 ATOM 15 CA GLN 2 -1.256 -12.448 4.418 1.00 4.83 ATOM 16 C GLN 2 0.013 -11.876 3.821 1.00 4.83 ATOM 17 O GLN 2 0.419 -10.773 4.176 1.00 4.83 ATOM 18 CB GLN 2 -0.924 -13.256 5.667 1.00 4.83 ATOM 19 CG GLN 2 -2.130 -13.554 6.532 1.00 4.83 ATOM 20 CD GLN 2 -2.771 -12.262 7.030 1.00 4.83 ATOM 21 OE1 GLN 2 -2.065 -11.351 7.500 1.00 4.83 ATOM 22 NE2 GLN 2 -4.098 -12.175 6.940 1.00 4.83 ATOM 31 N GLU 3 0.621 -12.594 2.888 1.00 2.27 ATOM 32 CA GLU 3 1.846 -12.101 2.279 1.00 2.27 ATOM 33 C GLU 3 1.553 -10.841 1.459 1.00 2.27 ATOM 34 O GLU 3 2.408 -9.959 1.322 1.00 2.27 ATOM 35 CB GLU 3 2.497 -13.185 1.426 1.00 2.27 ATOM 36 CG GLU 3 3.017 -14.386 2.244 1.00 2.27 ATOM 37 CD GLU 3 4.070 -14.017 3.287 1.00 2.27 ATOM 38 OE1 GLU 3 5.035 -13.382 2.950 1.00 2.27 ATOM 39 OE2 GLU 3 3.883 -14.374 4.441 1.00 2.27 ATOM 46 N THR 4 0.344 -10.760 0.883 1.00 3.49 ATOM 47 CA THR 4 -0.002 -9.597 0.094 1.00 3.49 ATOM 48 C THR 4 -0.117 -8.437 1.059 1.00 3.49 ATOM 49 O THR 4 0.441 -7.361 0.831 1.00 3.49 ATOM 50 CB THR 4 -1.342 -9.765 -0.642 1.00 3.49 ATOM 51 OG1 THR 4 -1.278 -10.898 -1.546 1.00 3.49 ATOM 52 CG2 THR 4 -1.641 -8.501 -1.406 1.00 3.49 ATOM 60 N ARG 5 -0.822 -8.683 2.170 1.00 1.86 ATOM 61 CA ARG 5 -1.030 -7.650 3.173 1.00 1.86 ATOM 62 C ARG 5 0.309 -7.134 3.674 1.00 1.86 ATOM 63 O ARG 5 0.512 -5.923 3.778 1.00 1.86 ATOM 64 CB ARG 5 -1.862 -8.157 4.344 1.00 1.86 ATOM 65 CG ARG 5 -2.213 -7.078 5.386 1.00 1.86 ATOM 66 CD ARG 5 -3.037 -7.612 6.533 1.00 1.86 ATOM 67 NE ARG 5 -2.298 -8.535 7.383 1.00 1.86 ATOM 68 CZ ARG 5 -1.446 -8.179 8.355 1.00 1.86 ATOM 69 NH1 ARG 5 -1.218 -6.912 8.633 1.00 1.86 ATOM 70 NH2 ARG 5 -0.853 -9.140 9.022 1.00 1.86 ATOM 84 N LYS 6 1.247 -8.042 3.954 1.00 1.82 ATOM 85 CA LYS 6 2.538 -7.599 4.457 1.00 1.82 ATOM 86 C LYS 6 3.205 -6.659 3.465 1.00 1.82 ATOM 87 O LYS 6 3.634 -5.564 3.850 1.00 1.82 ATOM 88 CB LYS 6 3.459 -8.796 4.687 1.00 1.82 ATOM 89 CG LYS 6 3.114 -9.693 5.865 1.00 1.82 ATOM 90 CD LYS 6 4.064 -10.888 5.897 1.00 1.82 ATOM 91 CE LYS 6 3.725 -11.874 6.996 1.00 1.82 ATOM 92 NZ LYS 6 4.593 -13.092 6.917 1.00 1.82 ATOM 106 N LYS 7 3.225 -7.028 2.177 1.00 1.80 ATOM 107 CA LYS 7 3.852 -6.154 1.193 1.00 1.80 ATOM 108 C LYS 7 3.142 -4.811 1.116 1.00 1.80 ATOM 109 O LYS 7 3.783 -3.758 1.018 1.00 1.80 ATOM 110 CB LYS 7 3.884 -6.798 -0.188 1.00 1.80 ATOM 111 CG LYS 7 4.897 -7.934 -0.359 1.00 1.80 ATOM 112 CD LYS 7 4.786 -8.511 -1.756 1.00 1.80 ATOM 113 CE LYS 7 5.141 -7.437 -2.775 1.00 1.80 ATOM 114 NZ LYS 7 5.051 -7.906 -4.185 1.00 1.80 ATOM 128 N CYS 8 1.816 -4.828 1.216 1.00 0.16 ATOM 129 CA CYS 8 1.065 -3.585 1.142 1.00 0.16 ATOM 130 C CYS 8 1.452 -2.656 2.285 1.00 0.16 ATOM 131 O CYS 8 1.595 -1.443 2.086 1.00 0.16 ATOM 132 CB CYS 8 -0.436 -3.855 1.220 1.00 0.16 ATOM 133 SG CYS 8 -1.162 -4.683 -0.238 1.00 0.16 ATOM 138 N THR 9 1.652 -3.221 3.485 1.00 0.45 ATOM 139 CA THR 9 1.995 -2.390 4.629 1.00 0.45 ATOM 140 C THR 9 3.438 -1.905 4.549 1.00 0.45 ATOM 141 O THR 9 3.738 -0.793 4.984 1.00 0.45 ATOM 142 CB THR 9 1.755 -3.121 5.971 1.00 0.45 ATOM 143 OG1 THR 9 2.564 -4.304 6.049 1.00 0.45 ATOM 144 CG2 THR 9 0.282 -3.498 6.103 1.00 0.45 ATOM 152 N GLU 10 4.336 -2.680 3.937 1.00 1.75 ATOM 153 CA GLU 10 5.699 -2.177 3.824 1.00 1.75 ATOM 154 C GLU 10 5.718 -0.994 2.860 1.00 1.75 ATOM 155 O GLU 10 6.417 0.002 3.085 1.00 1.75 ATOM 156 CB GLU 10 6.674 -3.274 3.387 1.00 1.75 ATOM 157 CG GLU 10 6.946 -4.358 4.462 1.00 1.75 ATOM 158 CD GLU 10 7.609 -3.808 5.729 1.00 1.75 ATOM 159 OE1 GLU 10 8.605 -3.140 5.615 1.00 1.75 ATOM 160 OE2 GLU 10 7.112 -4.064 6.812 1.00 1.75 ATOM 167 N MET 11 4.915 -1.069 1.797 1.00 0.31 ATOM 168 CA MET 11 4.911 0.051 0.882 1.00 0.31 ATOM 169 C MET 11 4.247 1.266 1.543 1.00 0.31 ATOM 170 O MET 11 4.664 2.404 1.310 1.00 0.31 ATOM 171 CB MET 11 4.245 -0.332 -0.421 1.00 0.31 ATOM 172 CG MET 11 5.013 -1.386 -1.222 1.00 0.31 ATOM 173 SD MET 11 6.782 -1.018 -1.410 1.00 0.31 ATOM 174 CE MET 11 6.866 0.536 -2.263 1.00 0.31 ATOM 184 N LYS 12 3.268 1.024 2.431 1.00 2.82 ATOM 185 CA LYS 12 2.620 2.098 3.188 1.00 2.82 ATOM 186 C LYS 12 3.656 2.835 4.030 1.00 2.82 ATOM 187 O LYS 12 3.659 4.062 4.101 1.00 2.82 ATOM 188 CB LYS 12 1.536 1.554 4.123 1.00 2.82 ATOM 189 CG LYS 12 0.777 2.622 4.902 1.00 2.82 ATOM 190 CD LYS 12 -0.247 2.001 5.855 1.00 2.82 ATOM 191 CE LYS 12 -1.015 3.075 6.612 1.00 2.82 ATOM 192 NZ LYS 12 -1.994 2.488 7.571 1.00 2.82 ATOM 206 N LYS 13 4.543 2.064 4.677 1.00 4.59 ATOM 207 CA LYS 13 5.590 2.623 5.529 1.00 4.59 ATOM 208 C LYS 13 6.534 3.527 4.746 1.00 4.59 ATOM 209 O LYS 13 7.014 4.530 5.285 1.00 4.59 ATOM 210 CB LYS 13 6.413 1.509 6.183 1.00 4.59 ATOM 211 CG LYS 13 5.713 0.709 7.270 1.00 4.59 ATOM 212 CD LYS 13 6.630 -0.413 7.758 1.00 4.59 ATOM 213 CE LYS 13 5.972 -1.289 8.801 1.00 4.59 ATOM 214 NZ LYS 13 6.853 -2.440 9.171 1.00 4.59 ATOM 228 N LYS 14 6.819 3.162 3.491 1.00 2.56 ATOM 229 CA LYS 14 7.682 3.974 2.637 1.00 2.56 ATOM 230 C LYS 14 6.962 5.255 2.175 1.00 2.56 ATOM 231 O LYS 14 7.519 6.361 2.206 1.00 2.56 ATOM 232 CB LYS 14 8.139 3.139 1.439 1.00 2.56 ATOM 233 CG LYS 14 9.115 2.027 1.808 1.00 2.56 ATOM 234 CD LYS 14 9.509 1.191 0.607 1.00 2.56 ATOM 235 CE LYS 14 10.492 0.097 1.004 1.00 2.56 ATOM 236 NZ LYS 14 10.859 -0.783 -0.144 1.00 2.56 ATOM 250 N PHE 15 5.696 5.118 1.800 1.00 2.34 ATOM 251 CA PHE 15 4.910 6.248 1.315 1.00 2.34 ATOM 252 C PHE 15 4.241 7.025 2.436 1.00 2.34 ATOM 253 O PHE 15 3.041 6.893 2.729 1.00 2.34 ATOM 254 CB PHE 15 3.980 5.751 0.220 1.00 2.34 ATOM 255 CG PHE 15 4.794 5.537 -1.020 1.00 2.34 ATOM 256 CD1 PHE 15 5.619 4.432 -1.170 1.00 2.34 ATOM 257 CD2 PHE 15 4.741 6.458 -2.049 1.00 2.34 ATOM 258 CE1 PHE 15 6.385 4.271 -2.313 1.00 2.34 ATOM 259 CE2 PHE 15 5.495 6.285 -3.186 1.00 2.34 ATOM 260 CZ PHE 15 6.315 5.197 -3.318 1.00 2.34 ATOM 270 N LYS 16 5.074 7.860 3.048 1.00 4.46 ATOM 271 CA LYS 16 4.708 8.603 4.239 1.00 4.46 ATOM 272 C LYS 16 3.537 9.516 3.999 1.00 4.46 ATOM 273 O LYS 16 3.493 10.254 3.017 1.00 4.46 ATOM 274 CB LYS 16 5.875 9.471 4.716 1.00 4.46 ATOM 275 CG LYS 16 7.126 8.725 5.132 1.00 4.46 ATOM 276 CD LYS 16 6.889 7.891 6.363 1.00 4.46 ATOM 277 CE LYS 16 8.193 7.335 6.909 1.00 4.46 ATOM 278 NZ LYS 16 8.850 6.455 5.929 1.00 4.46 ATOM 292 N ASN 17 2.611 9.479 4.946 1.00 2.55 ATOM 293 CA ASN 17 1.404 10.292 4.972 1.00 2.55 ATOM 294 C ASN 17 0.483 10.072 3.772 1.00 2.55 ATOM 295 O ASN 17 -0.337 10.941 3.464 1.00 2.55 ATOM 296 CB ASN 17 1.765 11.763 5.089 1.00 2.55 ATOM 297 CG ASN 17 2.528 12.066 6.350 1.00 2.55 ATOM 298 OD1 ASN 17 2.261 11.491 7.412 1.00 2.55 ATOM 299 ND2 ASN 17 3.483 12.958 6.252 1.00 2.55 ATOM 306 N CYS 18 0.550 8.895 3.145 1.00 4.26 ATOM 307 CA CYS 18 -0.355 8.603 2.042 1.00 4.26 ATOM 308 C CYS 18 -1.499 7.703 2.504 1.00 4.26 ATOM 309 O CYS 18 -1.350 6.932 3.455 1.00 4.26 ATOM 310 CB CYS 18 0.404 7.943 0.894 1.00 4.26 ATOM 311 SG CYS 18 1.741 8.978 0.204 1.00 4.26 ATOM 316 N GLU 19 -2.651 7.812 1.847 1.00 3.98 ATOM 317 CA GLU 19 -3.801 6.958 2.161 1.00 3.98 ATOM 318 C GLU 19 -3.691 5.700 1.336 1.00 3.98 ATOM 319 O GLU 19 -3.419 5.790 0.139 1.00 3.98 ATOM 320 CB GLU 19 -5.136 7.661 1.874 1.00 3.98 ATOM 321 CG GLU 19 -6.368 6.839 2.261 1.00 3.98 ATOM 322 CD GLU 19 -7.700 7.512 1.967 1.00 3.98 ATOM 323 OE1 GLU 19 -7.722 8.637 1.498 1.00 3.98 ATOM 324 OE2 GLU 19 -8.704 6.888 2.221 1.00 3.98 ATOM 331 N VAL 20 -3.864 4.525 1.937 1.00 0.32 ATOM 332 CA VAL 20 -3.697 3.334 1.123 1.00 0.32 ATOM 333 C VAL 20 -4.831 2.317 1.213 1.00 0.32 ATOM 334 O VAL 20 -5.528 2.234 2.229 1.00 0.32 ATOM 335 CB VAL 20 -2.408 2.611 1.526 1.00 0.32 ATOM 336 CG1 VAL 20 -1.204 3.526 1.373 1.00 0.32 ATOM 337 CG2 VAL 20 -2.525 2.090 2.911 1.00 0.32 ATOM 347 N ARG 21 -4.941 1.480 0.172 1.00 3.39 ATOM 348 CA ARG 21 -5.871 0.346 0.150 1.00 3.39 ATOM 349 C ARG 21 -5.185 -0.898 -0.417 1.00 3.39 ATOM 350 O ARG 21 -4.641 -0.870 -1.519 1.00 3.39 ATOM 351 CB ARG 21 -7.088 0.649 -0.718 1.00 3.39 ATOM 352 CG ARG 21 -8.160 -0.456 -0.751 1.00 3.39 ATOM 353 CD ARG 21 -9.360 -0.052 -1.563 1.00 3.39 ATOM 354 NE ARG 21 -9.050 0.024 -2.998 1.00 3.39 ATOM 355 CZ ARG 21 -9.183 -0.999 -3.872 1.00 3.39 ATOM 356 NH1 ARG 21 -9.641 -2.170 -3.488 1.00 3.39 ATOM 357 NH2 ARG 21 -8.836 -0.800 -5.120 1.00 3.39 ATOM 371 N CYS 22 -5.212 -1.999 0.325 1.00 3.46 ATOM 372 CA CYS 22 -4.553 -3.228 -0.135 1.00 3.46 ATOM 373 C CYS 22 -5.558 -4.169 -0.782 1.00 3.46 ATOM 374 O CYS 22 -6.604 -4.443 -0.187 1.00 3.46 ATOM 375 CB CYS 22 -3.866 -3.947 1.011 1.00 3.46 ATOM 376 SG CYS 22 -2.937 -5.427 0.495 1.00 3.46 ATOM 381 N ASP 23 -5.275 -4.640 -1.999 1.00 0.41 ATOM 382 CA ASP 23 -6.231 -5.508 -2.681 1.00 0.41 ATOM 383 C ASP 23 -5.588 -6.718 -3.373 1.00 0.41 ATOM 384 O ASP 23 -4.912 -6.611 -4.416 1.00 0.41 ATOM 385 CB ASP 23 -7.059 -4.673 -3.664 1.00 0.41 ATOM 386 CG ASP 23 -8.249 -5.422 -4.374 1.00 0.41 ATOM 387 OD1 ASP 23 -8.282 -6.649 -4.388 1.00 0.41 ATOM 388 OD2 ASP 23 -9.139 -4.734 -4.857 1.00 0.41 ATOM 393 N GLU 24 -5.851 -7.893 -2.787 1.00 4.09 ATOM 394 CA GLU 24 -5.330 -9.182 -3.236 1.00 4.09 ATOM 395 C GLU 24 -5.808 -9.569 -4.636 1.00 4.09 ATOM 396 O GLU 24 -5.246 -10.471 -5.246 1.00 4.09 ATOM 397 CB GLU 24 -5.642 -10.290 -2.225 1.00 4.09 ATOM 398 CG GLU 24 -7.105 -10.664 -2.090 1.00 4.09 ATOM 399 CD GLU 24 -7.330 -11.724 -1.037 1.00 4.09 ATOM 400 OE1 GLU 24 -6.356 -12.218 -0.495 1.00 4.09 ATOM 401 OE2 GLU 24 -8.460 -12.044 -0.767 1.00 4.09 ATOM 408 N SER 25 -6.826 -8.886 -5.168 1.00 3.02 ATOM 409 CA SER 25 -7.305 -9.175 -6.516 1.00 3.02 ATOM 410 C SER 25 -6.165 -8.968 -7.510 1.00 3.02 ATOM 411 O SER 25 -6.080 -9.651 -8.531 1.00 3.02 ATOM 412 CB SER 25 -8.435 -8.242 -6.904 1.00 3.02 ATOM 413 OG SER 25 -9.538 -8.407 -6.070 1.00 3.02 ATOM 419 N ASN 26 -5.318 -7.969 -7.223 1.00 3.39 ATOM 420 CA ASN 26 -4.180 -7.631 -8.069 1.00 3.39 ATOM 421 C ASN 26 -2.865 -7.831 -7.315 1.00 3.39 ATOM 422 O ASN 26 -1.784 -7.771 -7.906 1.00 3.39 ATOM 423 CB ASN 26 -4.301 -6.213 -8.584 1.00 3.39 ATOM 424 CG ASN 26 -5.457 -6.026 -9.532 1.00 3.39 ATOM 425 OD1 ASN 26 -5.384 -6.423 -10.698 1.00 3.39 ATOM 426 ND2 ASN 26 -6.518 -5.426 -9.059 1.00 3.39 ATOM 433 N HIS 27 -2.975 -8.092 -6.009 1.00 1.93 ATOM 434 CA HIS 27 -1.842 -8.263 -5.104 1.00 1.93 ATOM 435 C HIS 27 -1.003 -7.012 -5.017 1.00 1.93 ATOM 436 O HIS 27 0.227 -7.060 -5.095 1.00 1.93 ATOM 437 CB HIS 27 -0.963 -9.458 -5.481 1.00 1.93 ATOM 438 CG HIS 27 -1.673 -10.753 -5.428 1.00 1.93 ATOM 439 ND1 HIS 27 -2.076 -11.328 -4.241 1.00 1.93 ATOM 440 CD2 HIS 27 -2.054 -11.602 -6.409 1.00 1.93 ATOM 441 CE1 HIS 27 -2.673 -12.477 -4.496 1.00 1.93 ATOM 442 NE2 HIS 27 -2.669 -12.671 -5.805 1.00 1.93 ATOM 450 N CYS 28 -1.682 -5.889 -4.833 1.00 1.51 ATOM 451 CA CYS 28 -0.994 -4.608 -4.768 1.00 1.51 ATOM 452 C CYS 28 -1.695 -3.610 -3.876 1.00 1.51 ATOM 453 O CYS 28 -2.799 -3.864 -3.383 1.00 1.51 ATOM 454 CB CYS 28 -0.895 -4.000 -6.164 1.00 1.51 ATOM 455 SG CYS 28 -2.486 -3.536 -6.847 1.00 1.51 ATOM 461 N VAL 29 -1.054 -2.460 -3.678 1.00 3.52 ATOM 462 CA VAL 29 -1.671 -1.432 -2.860 1.00 3.52 ATOM 463 C VAL 29 -1.872 -0.145 -3.656 1.00 3.52 ATOM 464 O VAL 29 -0.983 0.314 -4.385 1.00 3.52 ATOM 465 CB VAL 29 -0.804 -1.167 -1.601 1.00 3.52 ATOM 466 CG1 VAL 29 0.535 -0.711 -1.980 1.00 3.52 ATOM 467 CG2 VAL 29 -1.452 -0.179 -0.700 1.00 3.52 ATOM 477 N GLU 30 -3.064 0.427 -3.506 1.00 1.20 ATOM 478 CA GLU 30 -3.452 1.680 -4.143 1.00 1.20 ATOM 479 C GLU 30 -3.060 2.783 -3.184 1.00 1.20 ATOM 480 O GLU 30 -3.421 2.709 -2.009 1.00 1.20 ATOM 481 CB GLU 30 -4.965 1.687 -4.413 1.00 1.20 ATOM 482 CG GLU 30 -5.510 2.893 -5.190 1.00 1.20 ATOM 483 CD GLU 30 -7.039 2.823 -5.410 1.00 1.20 ATOM 484 OE1 GLU 30 -7.667 1.968 -4.823 1.00 1.20 ATOM 485 OE2 GLU 30 -7.564 3.610 -6.183 1.00 1.20 ATOM 492 N VAL 31 -2.293 3.772 -3.651 1.00 4.07 ATOM 493 CA VAL 31 -1.800 4.810 -2.750 1.00 4.07 ATOM 494 C VAL 31 -2.123 6.251 -3.171 1.00 4.07 ATOM 495 O VAL 31 -1.753 6.691 -4.263 1.00 4.07 ATOM 496 CB VAL 31 -0.286 4.679 -2.702 1.00 4.07 ATOM 497 CG1 VAL 31 0.293 5.682 -1.785 1.00 4.07 ATOM 498 CG2 VAL 31 0.084 3.287 -2.360 1.00 4.07 ATOM 508 N ARG 32 -2.771 7.014 -2.286 1.00 1.49 ATOM 509 CA ARG 32 -3.092 8.414 -2.569 1.00 1.49 ATOM 510 C ARG 32 -2.173 9.352 -1.795 1.00 1.49 ATOM 511 O ARG 32 -2.170 9.358 -0.558 1.00 1.49 ATOM 512 CB ARG 32 -4.523 8.748 -2.186 1.00 1.49 ATOM 513 CG ARG 32 -4.938 10.182 -2.502 1.00 1.49 ATOM 514 CD ARG 32 -6.368 10.457 -2.143 1.00 1.49 ATOM 515 NE ARG 32 -6.584 10.460 -0.688 1.00 1.49 ATOM 516 CZ ARG 32 -6.423 11.534 0.104 1.00 1.49 ATOM 517 NH1 ARG 32 -6.044 12.697 -0.391 1.00 1.49 ATOM 518 NH2 ARG 32 -6.658 11.393 1.387 1.00 1.49 ATOM 532 N CYS 33 -1.387 10.146 -2.505 1.00 0.00 ATOM 533 CA CYS 33 -0.420 11.023 -1.855 1.00 0.00 ATOM 534 C CYS 33 -0.707 12.463 -2.218 1.00 0.00 ATOM 535 O CYS 33 -1.388 12.734 -3.209 1.00 0.00 ATOM 536 CB CYS 33 1.002 10.656 -2.257 1.00 0.00 ATOM 537 SG CYS 33 1.504 8.971 -1.816 1.00 0.00 ATOM 542 N SER 34 -0.212 13.414 -1.439 1.00 3.18 ATOM 543 CA SER 34 -0.471 14.792 -1.826 1.00 3.18 ATOM 544 C SER 34 0.005 15.014 -3.263 1.00 3.18 ATOM 545 O SER 34 1.147 14.697 -3.602 1.00 3.18 ATOM 546 CB SER 34 0.237 15.748 -0.879 1.00 3.18 ATOM 547 OG SER 34 0.029 17.089 -1.246 1.00 3.18 ATOM 553 N ASP 35 -0.907 15.531 -4.091 1.00 4.77 ATOM 554 CA ASP 35 -0.717 15.851 -5.510 1.00 4.77 ATOM 555 C ASP 35 -0.430 14.669 -6.467 1.00 4.77 ATOM 556 O ASP 35 -0.146 14.908 -7.644 1.00 4.77 ATOM 557 CB ASP 35 0.407 16.882 -5.652 1.00 4.77 ATOM 558 CG ASP 35 0.072 18.191 -4.947 1.00 4.77 ATOM 559 OD1 ASP 35 -1.037 18.651 -5.076 1.00 4.77 ATOM 560 OD2 ASP 35 0.916 18.691 -4.244 1.00 4.77 ATOM 565 N THR 36 -0.503 13.415 -6.001 1.00 0.98 ATOM 566 CA THR 36 -0.234 12.293 -6.906 1.00 0.98 ATOM 567 C THR 36 -0.874 10.950 -6.491 1.00 0.98 ATOM 568 O THR 36 -1.640 10.851 -5.528 1.00 0.98 ATOM 569 CB THR 36 1.291 12.131 -7.110 1.00 0.98 ATOM 570 OG1 THR 36 1.549 11.199 -8.184 1.00 0.98 ATOM 571 CG2 THR 36 1.923 11.648 -5.851 1.00 0.98 ATOM 579 N LYS 37 -0.560 9.908 -7.257 1.00 4.82 ATOM 580 CA LYS 37 -1.108 8.579 -6.994 1.00 4.82 ATOM 581 C LYS 37 -0.160 7.473 -7.451 1.00 4.82 ATOM 582 O LYS 37 0.463 7.584 -8.509 1.00 4.82 ATOM 583 CB LYS 37 -2.473 8.428 -7.664 1.00 4.82 ATOM 584 CG LYS 37 -3.197 7.160 -7.287 1.00 4.82 ATOM 585 CD LYS 37 -4.597 7.119 -7.819 1.00 4.82 ATOM 586 CE LYS 37 -5.286 5.894 -7.290 1.00 4.82 ATOM 587 NZ LYS 37 -6.679 5.786 -7.734 1.00 4.82 ATOM 601 N TYR 38 -0.059 6.410 -6.645 1.00 0.27 ATOM 602 CA TYR 38 0.813 5.287 -6.986 1.00 0.27 ATOM 603 C TYR 38 0.127 3.929 -6.866 1.00 0.27 ATOM 604 O TYR 38 -0.818 3.748 -6.092 1.00 0.27 ATOM 605 CB TYR 38 2.026 5.230 -6.050 1.00 0.27 ATOM 606 CG TYR 38 2.845 6.460 -5.979 1.00 0.27 ATOM 607 CD1 TYR 38 2.520 7.434 -5.050 1.00 0.27 ATOM 608 CD2 TYR 38 3.922 6.628 -6.822 1.00 0.27 ATOM 609 CE1 TYR 38 3.283 8.576 -4.972 1.00 0.27 ATOM 610 CE2 TYR 38 4.679 7.774 -6.746 1.00 0.27 ATOM 611 CZ TYR 38 4.364 8.746 -5.824 1.00 0.27 ATOM 612 OH TYR 38 5.127 9.887 -5.740 1.00 0.27 ATOM 622 N THR 39 0.645 2.959 -7.609 1.00 3.48 ATOM 623 CA THR 39 0.276 1.567 -7.394 1.00 3.48 ATOM 624 C THR 39 1.577 0.880 -7.036 1.00 3.48 ATOM 625 O THR 39 2.537 0.928 -7.811 1.00 3.48 ATOM 626 CB THR 39 -0.377 0.906 -8.613 1.00 3.48 ATOM 627 OG1 THR 39 -1.568 1.625 -8.966 1.00 3.48 ATOM 628 CG2 THR 39 -0.742 -0.542 -8.255 1.00 3.48 ATOM 636 N LEU 40 1.634 0.302 -5.848 1.00 3.61 ATOM 637 CA LEU 40 2.879 -0.268 -5.357 1.00 3.61 ATOM 638 C LEU 40 2.771 -1.757 -5.077 1.00 3.61 ATOM 639 O LEU 40 1.662 -2.264 -4.908 1.00 3.61 ATOM 640 CB LEU 40 3.293 0.464 -4.097 1.00 3.61 ATOM 641 CG LEU 40 3.331 1.977 -4.197 1.00 3.61 ATOM 642 CD1 LEU 40 3.604 2.504 -2.887 1.00 3.61 ATOM 643 CD2 LEU 40 4.398 2.435 -5.160 1.00 3.61 ATOM 655 N CYS 41 3.940 -2.423 -5.028 1.00 4.27 ATOM 656 CA CYS 41 4.157 -3.855 -4.731 1.00 4.27 ATOM 657 C CYS 41 4.592 -4.609 -5.986 1.00 4.27 ATOM 658 O CYS 41 5.105 -5.732 -5.906 1.00 4.27 ATOM 659 OXT CYS 41 4.630 -3.996 -7.051 1.00 4.27 ATOM 660 CB CYS 41 2.922 -4.564 -4.145 1.00 4.27 ATOM 661 SG CYS 41 2.395 -3.994 -2.471 1.00 4.27 TER END