####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 334), selected 41 , name T0955TS365_1 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS365_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 29 1 - 29 4.82 8.47 LCS_AVERAGE: 63.89 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 1 - 17 1.87 13.03 LCS_AVERAGE: 29.98 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 1 - 15 0.89 13.84 LONGEST_CONTINUOUS_SEGMENT: 15 2 - 16 0.98 13.82 LCS_AVERAGE: 21.95 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 15 17 29 3 5 13 14 16 16 17 21 23 24 26 28 30 32 33 34 35 37 37 39 LCS_GDT Q 2 Q 2 15 17 29 3 14 14 14 16 16 17 21 23 24 26 28 30 32 33 34 35 37 37 39 LCS_GDT E 3 E 3 15 17 29 9 14 14 14 16 16 17 21 23 24 26 28 30 32 33 34 35 37 37 39 LCS_GDT T 4 T 4 15 17 29 9 14 14 14 16 16 17 21 23 24 25 27 30 32 33 34 35 37 37 39 LCS_GDT R 5 R 5 15 17 29 9 14 14 14 16 16 17 21 23 24 26 28 30 32 33 34 35 37 37 39 LCS_GDT K 6 K 6 15 17 29 9 14 14 14 16 16 17 21 23 24 26 28 30 32 33 34 35 37 37 39 LCS_GDT K 7 K 7 15 17 29 9 14 14 14 16 16 17 21 23 24 26 28 30 32 33 34 35 37 37 39 LCS_GDT C 8 C 8 15 17 29 9 14 14 14 16 16 17 21 23 24 26 28 30 32 33 34 35 37 37 39 LCS_GDT T 9 T 9 15 17 29 9 14 14 14 16 16 17 21 23 24 26 28 30 32 33 34 35 37 37 39 LCS_GDT E 10 E 10 15 17 29 9 14 14 14 16 16 17 21 23 24 26 28 30 32 33 34 35 37 37 39 LCS_GDT M 11 M 11 15 17 29 9 14 14 14 16 16 17 21 23 24 26 28 30 32 33 34 35 37 37 39 LCS_GDT K 12 K 12 15 17 29 9 14 14 14 16 16 17 21 23 24 26 28 30 32 33 34 35 37 37 39 LCS_GDT K 13 K 13 15 17 29 7 14 14 14 16 16 17 17 19 24 24 26 30 32 33 34 35 37 37 39 LCS_GDT K 14 K 14 15 17 29 4 14 14 14 16 16 17 21 23 24 26 28 30 32 33 34 35 37 37 39 LCS_GDT F 15 F 15 15 17 29 5 14 14 14 16 16 17 21 23 24 26 28 30 32 33 34 35 37 37 39 LCS_GDT K 16 K 16 15 17 29 4 4 6 10 16 16 17 21 23 24 26 28 30 32 33 34 35 37 37 39 LCS_GDT N 17 N 17 4 17 29 4 4 7 10 13 15 17 21 23 24 26 28 30 32 33 34 35 37 37 39 LCS_GDT C 18 C 18 6 10 29 4 5 6 10 13 15 17 21 23 24 26 28 30 32 33 34 35 37 37 39 LCS_GDT E 19 E 19 6 10 29 4 5 7 10 13 15 17 21 23 24 25 27 30 32 33 34 34 37 37 39 LCS_GDT V 20 V 20 6 10 29 3 5 6 8 13 15 17 21 23 24 26 28 30 32 33 34 35 37 37 39 LCS_GDT R 21 R 21 6 10 29 3 5 7 10 13 15 17 21 23 24 25 27 30 32 33 34 35 37 37 39 LCS_GDT C 22 C 22 6 10 29 3 4 7 10 13 15 17 21 23 24 26 28 30 32 33 34 35 37 37 39 LCS_GDT D 23 D 23 6 10 29 3 4 7 10 13 15 17 21 23 24 26 28 30 32 33 34 35 37 37 39 LCS_GDT E 24 E 24 4 10 29 3 3 5 10 13 15 17 21 23 24 26 28 30 32 33 34 35 37 37 39 LCS_GDT S 25 S 25 4 9 29 3 4 5 7 9 14 16 18 21 24 26 28 30 32 33 34 35 37 37 39 LCS_GDT N 26 N 26 4 9 29 3 4 4 6 8 9 12 14 16 23 26 28 30 32 33 34 35 37 37 39 LCS_GDT H 27 H 27 4 9 29 3 4 6 9 12 13 14 15 17 21 25 28 30 32 33 34 35 37 37 38 LCS_GDT C 28 C 28 4 9 29 3 5 6 9 12 13 14 15 17 21 23 24 28 30 33 34 35 37 37 38 LCS_GDT V 29 V 29 6 9 29 3 5 6 9 12 13 14 15 17 20 23 25 29 32 33 34 35 37 37 39 LCS_GDT E 30 E 30 6 9 22 4 5 6 9 12 13 14 15 17 21 25 28 30 32 33 34 35 37 37 39 LCS_GDT V 31 V 31 6 9 22 4 5 6 9 12 13 14 15 17 21 26 28 30 32 33 34 35 37 37 39 LCS_GDT R 32 R 32 6 9 22 4 5 6 9 12 13 14 15 18 23 26 28 30 32 33 34 35 37 37 39 LCS_GDT C 33 C 33 6 9 22 4 5 6 9 12 13 14 15 20 23 26 28 30 32 33 34 35 37 37 39 LCS_GDT S 34 S 34 6 9 22 3 4 6 9 12 13 14 15 18 23 26 28 30 32 33 34 35 37 37 39 LCS_GDT D 35 D 35 3 9 22 3 3 6 9 12 13 14 15 16 20 20 23 25 29 31 34 35 37 37 39 LCS_GDT T 36 T 36 5 8 22 4 5 5 8 9 11 12 15 16 20 20 21 24 26 30 33 35 37 37 39 LCS_GDT K 37 K 37 5 8 22 4 5 6 8 9 11 12 15 16 20 20 21 23 24 28 31 35 37 37 39 LCS_GDT Y 38 Y 38 5 8 21 4 5 6 8 9 11 12 15 16 20 20 21 23 24 27 30 33 34 37 39 LCS_GDT T 39 T 39 5 8 12 4 5 6 8 9 11 12 15 16 20 20 21 23 24 27 30 33 34 36 39 LCS_GDT L 40 L 40 5 8 12 4 5 6 8 9 11 12 15 16 20 20 21 22 24 27 30 33 34 36 39 LCS_GDT C 41 C 41 5 6 12 3 4 5 8 8 11 12 15 16 20 20 21 23 24 27 30 33 34 36 39 LCS_AVERAGE LCS_A: 38.61 ( 21.95 29.98 63.89 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 14 14 14 16 16 17 21 23 24 26 28 30 32 33 34 35 37 37 39 GDT PERCENT_AT 21.95 34.15 34.15 34.15 39.02 39.02 41.46 51.22 56.10 58.54 63.41 68.29 73.17 78.05 80.49 82.93 85.37 90.24 90.24 95.12 GDT RMS_LOCAL 0.30 0.57 0.57 0.57 1.12 1.12 2.15 2.68 2.89 3.21 4.25 4.49 4.65 4.82 4.93 5.06 5.44 5.78 5.78 6.61 GDT RMS_ALL_AT 14.08 13.99 13.99 13.99 13.74 13.74 8.83 9.12 9.33 9.07 7.44 7.46 7.53 7.60 7.63 7.66 7.33 7.20 7.20 6.87 # Checking swapping # possible swapping detected: E 19 E 19 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 2.453 0 0.214 0.582 5.798 33.636 24.242 5.798 LGA Q 2 Q 2 1.443 0 0.216 1.183 7.460 65.909 36.364 3.598 LGA E 3 E 3 2.541 0 0.032 1.089 8.529 38.636 17.778 6.815 LGA T 4 T 4 3.744 0 0.017 1.179 7.757 16.818 9.610 7.757 LGA R 5 R 5 4.065 0 0.041 0.769 6.576 11.818 5.289 5.066 LGA K 6 K 6 2.894 0 0.022 1.429 12.291 38.636 18.384 12.291 LGA K 7 K 7 2.062 0 0.069 0.699 10.413 55.455 25.859 10.413 LGA C 8 C 8 3.967 0 0.061 0.765 8.990 15.000 10.000 8.990 LGA T 9 T 9 4.738 0 0.023 0.168 7.213 6.364 3.636 6.612 LGA E 10 E 10 3.196 0 0.019 1.473 10.475 30.909 14.949 10.475 LGA M 11 M 11 1.106 0 0.097 1.196 4.380 66.818 43.636 2.343 LGA K 12 K 12 4.798 0 0.058 0.946 13.517 5.455 2.424 13.517 LGA K 13 K 13 5.917 0 0.026 0.680 9.574 0.909 0.404 9.178 LGA K 14 K 14 3.461 0 0.194 0.528 11.491 28.636 12.727 11.323 LGA F 15 F 15 2.493 0 0.184 0.437 5.597 34.545 18.182 4.879 LGA K 16 K 16 3.854 0 0.664 1.475 12.376 23.636 10.505 12.376 LGA N 17 N 17 0.843 0 0.441 1.025 4.977 70.000 42.727 3.543 LGA C 18 C 18 1.931 0 0.627 1.081 4.933 44.545 31.818 4.933 LGA E 19 E 19 1.267 0 0.242 0.759 8.362 51.818 24.444 8.362 LGA V 20 V 20 3.089 0 0.089 0.108 6.881 29.545 16.883 6.881 LGA R 21 R 21 0.159 0 0.169 1.650 8.135 60.455 32.893 5.958 LGA C 22 C 22 1.118 0 0.103 0.765 2.319 77.727 66.667 2.319 LGA D 23 D 23 1.469 0 0.087 1.018 7.960 45.000 24.773 7.960 LGA E 24 E 24 3.686 0 0.386 1.215 7.546 12.273 29.293 3.161 LGA S 25 S 25 8.790 0 0.278 0.717 13.346 0.000 0.000 8.672 LGA N 26 N 26 12.630 0 0.441 1.235 15.768 0.000 0.000 10.372 LGA H 27 H 27 12.056 0 0.366 0.315 15.038 0.000 0.000 8.669 LGA C 28 C 28 13.981 0 0.263 0.838 17.475 0.000 0.000 17.475 LGA V 29 V 29 13.348 0 0.035 0.088 16.293 0.000 0.000 14.019 LGA E 30 E 30 14.151 0 0.055 0.849 17.025 0.000 0.000 16.989 LGA V 31 V 31 12.149 0 0.017 0.056 14.826 0.000 0.000 12.646 LGA R 32 R 32 11.186 0 0.122 1.349 19.096 0.000 0.000 19.096 LGA C 33 C 33 9.250 0 0.329 0.973 10.536 0.000 0.000 9.941 LGA S 34 S 34 13.970 0 0.277 0.686 17.469 0.000 0.000 14.193 LGA D 35 D 35 18.735 0 0.436 0.902 19.737 0.000 0.000 19.078 LGA T 36 T 36 17.486 0 0.321 0.460 18.530 0.000 0.000 18.530 LGA K 37 K 37 15.518 0 0.086 1.665 19.227 0.000 0.000 19.227 LGA Y 38 Y 38 15.122 0 0.096 1.376 15.122 0.000 0.000 8.864 LGA T 39 T 39 14.080 0 0.053 0.205 15.852 0.000 0.000 14.118 LGA L 40 L 40 13.080 0 0.524 1.216 13.774 0.000 0.000 10.792 LGA C 41 C 41 13.130 1 0.009 0.969 13.372 0.000 0.000 11.880 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 163 99.39 335 334 99.70 41 41 SUMMARY(RMSD_GDC): 6.808 6.725 7.999 21.086 12.768 2.927 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 21 2.68 50.610 45.161 0.756 LGA_LOCAL RMSD: 2.678 Number of atoms: 21 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 9.118 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 6.808 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.240573 * X + 0.068252 * Y + 0.968228 * Z + 3.217122 Y_new = 0.306682 * X + -0.941079 * Y + 0.142539 * Z + -19.244209 Z_new = 0.920908 * X + 0.331229 * Y + 0.205466 * Z + -3.568565 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.235976 -1.170403 1.015573 [DEG: 128.1120 -67.0592 58.1881 ] ZXZ: 1.716963 1.363856 1.225527 [DEG: 98.3747 78.1432 70.2175 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS365_1 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS365_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 21 2.68 45.161 6.81 REMARK ---------------------------------------------------------- MOLECULE T0955TS365_1 PFRMAT TS TARGET T0955 MODEL 1 PARENT N/A ATOM 1 N SER 1 3.000 -14.075 -2.318 1.00 0.00 ATOM 2 CA SER 1 2.000 -14.677 -1.357 1.00 0.00 ATOM 3 C SER 1 0.908 -13.666 -1.041 1.00 0.00 ATOM 4 O SER 1 0.860 -12.614 -1.673 1.00 0.00 ATOM 5 CB SER 1 2.732 -15.116 -0.050 1.00 0.00 ATOM 6 OG SER 1 3.401 -14.006 0.550 1.00 0.00 ATOM 7 N GLN 2 0.013 -13.917 -0.051 1.00 0.00 ATOM 8 CA GLN 2 -0.872 -12.877 0.469 1.00 0.00 ATOM 9 C GLN 2 -0.105 -11.749 1.147 1.00 0.00 ATOM 10 O GLN 2 -0.476 -10.582 1.055 1.00 0.00 ATOM 11 CB GLN 2 -1.925 -13.398 1.484 1.00 0.00 ATOM 12 CG GLN 2 -3.171 -14.057 0.841 1.00 0.00 ATOM 13 CD GLN 2 -4.446 -13.731 1.639 1.00 0.00 ATOM 14 OE1 GLN 2 -4.391 -13.237 2.771 1.00 0.00 ATOM 15 NE2 GLN 2 -5.619 -13.938 1.001 1.00 0.00 ATOM 16 N GLU 3 1.012 -12.081 1.831 1.00 0.00 ATOM 17 CA GLU 3 1.854 -11.142 2.544 1.00 0.00 ATOM 18 C GLU 3 2.393 -10.052 1.652 1.00 0.00 ATOM 19 O GLU 3 2.534 -8.913 2.068 1.00 0.00 ATOM 20 CB GLU 3 3.136 -11.809 3.071 1.00 0.00 ATOM 21 CG GLU 3 2.989 -13.135 3.833 1.00 0.00 ATOM 22 CD GLU 3 4.348 -13.803 3.693 1.00 0.00 ATOM 23 OE1 GLU 3 5.325 -13.266 4.279 1.00 0.00 ATOM 24 OE2 GLU 3 4.435 -14.717 2.835 1.00 0.00 ATOM 25 N THR 4 2.728 -10.399 0.393 1.00 0.00 ATOM 26 CA THR 4 3.347 -9.521 -0.590 1.00 0.00 ATOM 27 C THR 4 2.525 -8.273 -0.829 1.00 0.00 ATOM 28 O THR 4 3.047 -7.163 -0.839 1.00 0.00 ATOM 29 CB THR 4 3.545 -10.234 -1.926 1.00 0.00 ATOM 30 CG2 THR 4 4.458 -9.430 -2.861 1.00 0.00 ATOM 31 OG1 THR 4 4.152 -11.510 -1.740 1.00 0.00 ATOM 32 N ARG 5 1.192 -8.430 -0.949 1.00 0.00 ATOM 33 CA ARG 5 0.246 -7.338 -1.080 1.00 0.00 ATOM 34 C ARG 5 0.200 -6.448 0.158 1.00 0.00 ATOM 35 O ARG 5 0.193 -5.222 0.078 1.00 0.00 ATOM 36 CB ARG 5 -1.177 -7.913 -1.295 1.00 0.00 ATOM 37 CG ARG 5 -1.268 -9.051 -2.338 1.00 0.00 ATOM 38 CD ARG 5 -2.687 -9.595 -2.571 1.00 0.00 ATOM 39 NE ARG 5 -3.227 -9.958 -1.228 1.00 0.00 ATOM 40 CZ ARG 5 -4.222 -10.815 -0.970 1.00 0.00 ATOM 41 NH1 ARG 5 -4.741 -10.765 0.256 1.00 0.00 ATOM 42 NH2 ARG 5 -4.735 -11.633 -1.875 1.00 0.00 ATOM 43 N LYS 6 0.176 -7.076 1.348 1.00 0.00 ATOM 44 CA LYS 6 0.116 -6.434 2.648 1.00 0.00 ATOM 45 C LYS 6 1.398 -5.691 2.999 1.00 0.00 ATOM 46 O LYS 6 1.371 -4.551 3.444 1.00 0.00 ATOM 47 CB LYS 6 -0.260 -7.484 3.726 1.00 0.00 ATOM 48 CG LYS 6 -1.596 -8.162 3.375 1.00 0.00 ATOM 49 CD LYS 6 -2.046 -9.321 4.281 1.00 0.00 ATOM 50 CE LYS 6 -3.188 -10.083 3.589 1.00 0.00 ATOM 51 NZ LYS 6 -3.743 -11.170 4.418 1.00 0.00 ATOM 52 N LYS 7 2.572 -6.293 2.741 1.00 0.00 ATOM 53 CA LYS 7 3.876 -5.674 2.903 1.00 0.00 ATOM 54 C LYS 7 4.056 -4.474 1.975 1.00 0.00 ATOM 55 O LYS 7 4.498 -3.411 2.405 1.00 0.00 ATOM 56 CB LYS 7 4.998 -6.737 2.712 1.00 0.00 ATOM 57 CG LYS 7 5.056 -7.756 3.874 1.00 0.00 ATOM 58 CD LYS 7 5.941 -8.994 3.607 1.00 0.00 ATOM 59 CE LYS 7 6.095 -9.899 4.846 1.00 0.00 ATOM 60 NZ LYS 7 6.808 -11.162 4.544 1.00 0.00 ATOM 61 N CYS 8 3.635 -4.583 0.693 1.00 0.00 ATOM 62 CA CYS 8 3.570 -3.448 -0.223 1.00 0.00 ATOM 63 C CYS 8 2.589 -2.374 0.224 1.00 0.00 ATOM 64 O CYS 8 2.856 -1.182 0.098 1.00 0.00 ATOM 65 CB CYS 8 3.207 -3.866 -1.671 1.00 0.00 ATOM 66 SG CYS 8 4.501 -4.893 -2.439 1.00 0.00 ATOM 67 N THR 9 1.428 -2.763 0.787 1.00 0.00 ATOM 68 CA THR 9 0.440 -1.854 1.368 1.00 0.00 ATOM 69 C THR 9 1.007 -1.037 2.511 1.00 0.00 ATOM 70 O THR 9 0.831 0.180 2.560 1.00 0.00 ATOM 71 CB THR 9 -0.795 -2.593 1.875 1.00 0.00 ATOM 72 CG2 THR 9 -1.749 -1.678 2.653 1.00 0.00 ATOM 73 OG1 THR 9 -1.525 -3.129 0.779 1.00 0.00 ATOM 74 N GLU 10 1.754 -1.665 3.437 1.00 0.00 ATOM 75 CA GLU 10 2.436 -0.964 4.510 1.00 0.00 ATOM 76 C GLU 10 3.493 0.009 4.014 1.00 0.00 ATOM 77 O GLU 10 3.592 1.130 4.508 1.00 0.00 ATOM 78 CB GLU 10 3.033 -1.945 5.548 1.00 0.00 ATOM 79 CG GLU 10 1.966 -2.800 6.279 1.00 0.00 ATOM 80 CD GLU 10 0.862 -1.945 6.873 1.00 0.00 ATOM 81 OE1 GLU 10 1.180 -1.026 7.669 1.00 0.00 ATOM 82 OE2 GLU 10 -0.333 -2.162 6.542 1.00 0.00 ATOM 83 N MET 11 4.265 -0.359 2.970 1.00 0.00 ATOM 84 CA MET 11 5.160 0.559 2.279 1.00 0.00 ATOM 85 C MET 11 4.418 1.739 1.651 1.00 0.00 ATOM 86 O MET 11 4.808 2.891 1.810 1.00 0.00 ATOM 87 CB MET 11 5.960 -0.183 1.180 1.00 0.00 ATOM 88 CG MET 11 6.922 -1.255 1.730 1.00 0.00 ATOM 89 SD MET 11 7.441 -2.504 0.507 1.00 0.00 ATOM 90 CE MET 11 8.367 -1.410 -0.606 1.00 0.00 ATOM 91 N LYS 12 3.272 1.502 0.978 1.00 0.00 ATOM 92 CA LYS 12 2.437 2.557 0.422 1.00 0.00 ATOM 93 C LYS 12 1.903 3.531 1.470 1.00 0.00 ATOM 94 O LYS 12 1.922 4.746 1.256 1.00 0.00 ATOM 95 CB LYS 12 1.229 1.965 -0.355 1.00 0.00 ATOM 96 CG LYS 12 1.573 1.182 -1.641 1.00 0.00 ATOM 97 CD LYS 12 1.405 2.005 -2.932 1.00 0.00 ATOM 98 CE LYS 12 2.560 2.971 -3.222 1.00 0.00 ATOM 99 NZ LYS 12 2.072 4.147 -3.969 1.00 0.00 ATOM 100 N LYS 13 1.440 3.019 2.633 1.00 0.00 ATOM 101 CA LYS 13 1.036 3.835 3.765 1.00 0.00 ATOM 102 C LYS 13 2.176 4.640 4.387 1.00 0.00 ATOM 103 O LYS 13 2.039 5.836 4.635 1.00 0.00 ATOM 104 CB LYS 13 0.493 2.952 4.925 1.00 0.00 ATOM 105 CG LYS 13 -0.836 2.206 4.706 1.00 0.00 ATOM 106 CD LYS 13 -1.061 1.251 5.897 1.00 0.00 ATOM 107 CE LYS 13 -2.366 0.444 5.913 1.00 0.00 ATOM 108 NZ LYS 13 -2.313 -0.506 7.042 1.00 0.00 ATOM 109 N LYS 14 3.321 3.983 4.677 1.00 0.00 ATOM 110 CA LYS 14 4.295 4.469 5.647 1.00 0.00 ATOM 111 C LYS 14 5.626 4.852 5.031 1.00 0.00 ATOM 112 O LYS 14 6.568 5.218 5.728 1.00 0.00 ATOM 113 CB LYS 14 4.469 3.430 6.784 1.00 0.00 ATOM 114 CG LYS 14 3.232 3.406 7.702 1.00 0.00 ATOM 115 CD LYS 14 2.920 2.040 8.334 1.00 0.00 ATOM 116 CE LYS 14 1.580 2.087 9.075 1.00 0.00 ATOM 117 NZ LYS 14 1.135 0.761 9.529 1.00 0.00 ATOM 118 N PHE 15 5.701 4.905 3.687 1.00 0.00 ATOM 119 CA PHE 15 6.694 5.705 2.981 1.00 0.00 ATOM 120 C PHE 15 6.081 7.069 2.683 1.00 0.00 ATOM 121 O PHE 15 6.560 7.844 1.855 1.00 0.00 ATOM 122 CB PHE 15 7.136 5.060 1.638 1.00 0.00 ATOM 123 CG PHE 15 7.959 3.799 1.760 1.00 0.00 ATOM 124 CD1 PHE 15 8.290 3.146 0.560 1.00 0.00 ATOM 125 CD2 PHE 15 8.455 3.271 2.970 1.00 0.00 ATOM 126 CE1 PHE 15 9.098 2.005 0.557 1.00 0.00 ATOM 127 CE2 PHE 15 9.253 2.119 2.971 1.00 0.00 ATOM 128 CZ PHE 15 9.579 1.488 1.766 1.00 0.00 ATOM 129 N LYS 16 4.971 7.398 3.365 1.00 0.00 ATOM 130 CA LYS 16 4.252 8.634 3.239 1.00 0.00 ATOM 131 C LYS 16 3.573 8.932 4.551 1.00 0.00 ATOM 132 O LYS 16 3.675 8.203 5.533 1.00 0.00 ATOM 133 CB LYS 16 3.103 8.590 2.201 1.00 0.00 ATOM 134 CG LYS 16 3.467 8.053 0.823 1.00 0.00 ATOM 135 CD LYS 16 2.317 8.343 -0.146 1.00 0.00 ATOM 136 CE LYS 16 2.422 7.570 -1.448 1.00 0.00 ATOM 137 NZ LYS 16 2.468 6.140 -1.123 1.00 0.00 ATOM 138 N ASN 17 2.801 10.026 4.562 1.00 0.00 ATOM 139 CA ASN 17 1.657 10.130 5.430 1.00 0.00 ATOM 140 C ASN 17 0.532 10.743 4.605 1.00 0.00 ATOM 141 O ASN 17 0.039 11.834 4.892 1.00 0.00 ATOM 142 CB ASN 17 1.985 10.935 6.706 1.00 0.00 ATOM 143 CG ASN 17 0.833 10.778 7.683 1.00 0.00 ATOM 144 OD1 ASN 17 0.039 11.695 7.884 1.00 0.00 ATOM 145 ND2 ASN 17 0.698 9.556 8.237 1.00 0.00 ATOM 146 N CYS 18 0.152 10.060 3.505 1.00 0.00 ATOM 147 CA CYS 18 -0.787 10.614 2.544 1.00 0.00 ATOM 148 C CYS 18 -1.430 9.550 1.650 1.00 0.00 ATOM 149 O CYS 18 -2.021 9.866 0.621 1.00 0.00 ATOM 150 CB CYS 18 -0.085 11.685 1.654 1.00 0.00 ATOM 151 SG CYS 18 -1.241 12.885 0.907 1.00 0.00 ATOM 152 N GLU 19 -1.345 8.247 1.995 1.00 0.00 ATOM 153 CA GLU 19 -1.967 7.211 1.185 1.00 0.00 ATOM 154 C GLU 19 -2.472 6.108 2.092 1.00 0.00 ATOM 155 O GLU 19 -1.790 5.681 3.020 1.00 0.00 ATOM 156 CB GLU 19 -1.003 6.649 0.097 1.00 0.00 ATOM 157 CG GLU 19 -1.547 5.435 -0.703 1.00 0.00 ATOM 158 CD GLU 19 -0.908 5.219 -2.073 1.00 0.00 ATOM 159 OE1 GLU 19 0.336 5.066 -2.165 1.00 0.00 ATOM 160 OE2 GLU 19 -1.669 5.160 -3.074 1.00 0.00 ATOM 161 N VAL 20 -3.714 5.639 1.855 1.00 0.00 ATOM 162 CA VAL 20 -4.327 4.551 2.593 1.00 0.00 ATOM 163 C VAL 20 -4.853 3.567 1.567 1.00 0.00 ATOM 164 O VAL 20 -5.562 3.940 0.630 1.00 0.00 ATOM 165 CB VAL 20 -5.459 5.010 3.513 1.00 0.00 ATOM 166 CG1 VAL 20 -6.055 3.813 4.280 1.00 0.00 ATOM 167 CG2 VAL 20 -4.906 6.045 4.514 1.00 0.00 ATOM 168 N ARG 21 -4.474 2.282 1.699 1.00 0.00 ATOM 169 CA ARG 21 -4.831 1.209 0.795 1.00 0.00 ATOM 170 C ARG 21 -4.905 -0.036 1.647 1.00 0.00 ATOM 171 O ARG 21 -4.365 -0.042 2.754 1.00 0.00 ATOM 172 CB ARG 21 -3.743 0.939 -0.291 1.00 0.00 ATOM 173 CG ARG 21 -3.383 2.143 -1.182 1.00 0.00 ATOM 174 CD ARG 21 -4.510 2.616 -2.103 1.00 0.00 ATOM 175 NE ARG 21 -4.070 3.942 -2.642 1.00 0.00 ATOM 176 CZ ARG 21 -4.760 5.090 -2.588 1.00 0.00 ATOM 177 NH1 ARG 21 -4.189 6.162 -3.139 1.00 0.00 ATOM 178 NH2 ARG 21 -5.907 5.210 -1.933 1.00 0.00 ATOM 179 N CYS 22 -5.550 -1.107 1.146 1.00 0.00 ATOM 180 CA CYS 22 -5.354 -2.450 1.648 1.00 0.00 ATOM 181 C CYS 22 -5.889 -3.404 0.601 1.00 0.00 ATOM 182 O CYS 22 -6.499 -2.980 -0.379 1.00 0.00 ATOM 183 CB CYS 22 -6.007 -2.723 3.030 1.00 0.00 ATOM 184 SG CYS 22 -5.183 -4.070 3.955 1.00 0.00 ATOM 185 N ASP 23 -5.642 -4.713 0.766 1.00 0.00 ATOM 186 CA ASP 23 -6.107 -5.777 -0.081 1.00 0.00 ATOM 187 C ASP 23 -7.401 -6.422 0.426 1.00 0.00 ATOM 188 O ASP 23 -7.751 -6.334 1.605 1.00 0.00 ATOM 189 CB ASP 23 -4.975 -6.837 -0.227 1.00 0.00 ATOM 190 CG ASP 23 -4.431 -7.395 1.086 1.00 0.00 ATOM 191 OD1 ASP 23 -4.684 -6.852 2.189 1.00 0.00 ATOM 192 OD2 ASP 23 -3.725 -8.436 0.977 1.00 0.00 ATOM 193 N GLU 24 -8.133 -7.108 -0.489 1.00 0.00 ATOM 194 CA GLU 24 -9.324 -7.912 -0.220 1.00 0.00 ATOM 195 C GLU 24 -10.374 -7.259 0.672 1.00 0.00 ATOM 196 O GLU 24 -11.039 -6.302 0.284 1.00 0.00 ATOM 197 CB GLU 24 -8.942 -9.341 0.251 1.00 0.00 ATOM 198 CG GLU 24 -8.347 -10.213 -0.884 1.00 0.00 ATOM 199 CD GLU 24 -7.616 -11.449 -0.382 1.00 0.00 ATOM 200 OE1 GLU 24 -7.288 -11.534 0.829 1.00 0.00 ATOM 201 OE2 GLU 24 -7.190 -12.261 -1.242 1.00 0.00 ATOM 202 N SER 25 -10.566 -7.776 1.898 1.00 0.00 ATOM 203 CA SER 25 -11.577 -7.308 2.828 1.00 0.00 ATOM 204 C SER 25 -11.036 -6.255 3.775 1.00 0.00 ATOM 205 O SER 25 -11.709 -5.892 4.736 1.00 0.00 ATOM 206 CB SER 25 -12.106 -8.491 3.683 1.00 0.00 ATOM 207 OG SER 25 -11.039 -9.198 4.320 1.00 0.00 ATOM 208 N ASN 26 -9.814 -5.745 3.508 1.00 0.00 ATOM 209 CA ASN 26 -9.052 -4.839 4.348 1.00 0.00 ATOM 210 C ASN 26 -8.415 -5.557 5.520 1.00 0.00 ATOM 211 O ASN 26 -8.810 -5.403 6.669 1.00 0.00 ATOM 212 CB ASN 26 -9.776 -3.545 4.811 1.00 0.00 ATOM 213 CG ASN 26 -10.232 -2.743 3.601 1.00 0.00 ATOM 214 OD1 ASN 26 -9.469 -1.960 3.035 1.00 0.00 ATOM 215 ND2 ASN 26 -11.506 -2.927 3.189 1.00 0.00 ATOM 216 N HIS 27 -7.384 -6.380 5.252 1.00 0.00 ATOM 217 CA HIS 27 -6.674 -7.135 6.276 1.00 0.00 ATOM 218 C HIS 27 -5.990 -6.297 7.355 1.00 0.00 ATOM 219 O HIS 27 -6.055 -6.615 8.537 1.00 0.00 ATOM 220 CB HIS 27 -5.595 -8.013 5.611 1.00 0.00 ATOM 221 CG HIS 27 -6.188 -9.119 4.795 1.00 0.00 ATOM 222 ND1 HIS 27 -6.319 -10.375 5.361 1.00 0.00 ATOM 223 CD2 HIS 27 -6.636 -9.134 3.514 1.00 0.00 ATOM 224 CE1 HIS 27 -6.883 -11.117 4.424 1.00 0.00 ATOM 225 NE2 HIS 27 -7.070 -10.420 3.282 1.00 0.00 ATOM 226 N CYS 28 -5.311 -5.198 6.973 1.00 0.00 ATOM 227 CA CYS 28 -4.614 -4.317 7.894 1.00 0.00 ATOM 228 C CYS 28 -5.317 -2.969 7.959 1.00 0.00 ATOM 229 O CYS 28 -4.810 -1.954 7.468 1.00 0.00 ATOM 230 CB CYS 28 -3.123 -4.159 7.488 1.00 0.00 ATOM 231 SG CYS 28 -2.085 -3.427 8.805 1.00 0.00 ATOM 232 N VAL 29 -6.531 -2.948 8.559 1.00 0.00 ATOM 233 CA VAL 29 -7.386 -1.777 8.728 1.00 0.00 ATOM 234 C VAL 29 -6.704 -0.647 9.484 1.00 0.00 ATOM 235 O VAL 29 -6.403 -0.756 10.670 1.00 0.00 ATOM 236 CB VAL 29 -8.695 -2.087 9.460 1.00 0.00 ATOM 237 CG1 VAL 29 -9.644 -0.869 9.411 1.00 0.00 ATOM 238 CG2 VAL 29 -9.390 -3.303 8.828 1.00 0.00 ATOM 239 N GLU 30 -6.433 0.479 8.801 1.00 0.00 ATOM 240 CA GLU 30 -5.709 1.568 9.405 1.00 0.00 ATOM 241 C GLU 30 -5.947 2.802 8.565 1.00 0.00 ATOM 242 O GLU 30 -6.239 2.698 7.376 1.00 0.00 ATOM 243 CB GLU 30 -4.200 1.234 9.396 1.00 0.00 ATOM 244 CG GLU 30 -3.292 2.097 10.298 1.00 0.00 ATOM 245 CD GLU 30 -1.850 1.659 10.152 1.00 0.00 ATOM 246 OE1 GLU 30 -1.527 0.882 9.217 1.00 0.00 ATOM 247 OE2 GLU 30 -0.992 2.121 10.950 1.00 0.00 ATOM 248 N VAL 31 -5.807 4.002 9.153 1.00 0.00 ATOM 249 CA VAL 31 -5.823 5.256 8.426 1.00 0.00 ATOM 250 C VAL 31 -4.549 5.966 8.823 1.00 0.00 ATOM 251 O VAL 31 -4.242 6.075 10.007 1.00 0.00 ATOM 252 CB VAL 31 -7.031 6.131 8.761 1.00 0.00 ATOM 253 CG1 VAL 31 -6.968 7.478 8.007 1.00 0.00 ATOM 254 CG2 VAL 31 -8.320 5.378 8.379 1.00 0.00 ATOM 255 N ARG 32 -3.749 6.435 7.844 1.00 0.00 ATOM 256 CA ARG 32 -2.581 7.246 8.117 1.00 0.00 ATOM 257 C ARG 32 -2.656 8.486 7.261 1.00 0.00 ATOM 258 O ARG 32 -2.566 8.428 6.035 1.00 0.00 ATOM 259 CB ARG 32 -1.260 6.479 7.847 1.00 0.00 ATOM 260 CG ARG 32 -0.968 5.389 8.898 1.00 0.00 ATOM 261 CD ARG 32 -0.763 5.946 10.315 1.00 0.00 ATOM 262 NE ARG 32 -0.616 4.775 11.223 1.00 0.00 ATOM 263 CZ ARG 32 -0.793 4.842 12.549 1.00 0.00 ATOM 264 NH1 ARG 32 -0.943 3.678 13.184 1.00 0.00 ATOM 265 NH2 ARG 32 -0.851 5.982 13.225 1.00 0.00 ATOM 266 N CYS 33 -2.846 9.645 7.918 1.00 0.00 ATOM 267 CA CYS 33 -3.017 10.917 7.239 1.00 0.00 ATOM 268 C CYS 33 -2.997 12.093 8.215 1.00 0.00 ATOM 269 O CYS 33 -2.983 13.252 7.798 1.00 0.00 ATOM 270 CB CYS 33 -4.350 10.972 6.426 1.00 0.00 ATOM 271 SG CYS 33 -4.418 12.324 5.194 1.00 0.00 ATOM 272 N SER 34 -2.940 11.852 9.538 1.00 0.00 ATOM 273 CA SER 34 -2.854 12.906 10.543 1.00 0.00 ATOM 274 C SER 34 -1.471 12.966 11.155 1.00 0.00 ATOM 275 O SER 34 -1.112 13.915 11.849 1.00 0.00 ATOM 276 CB SER 34 -3.850 12.622 11.700 1.00 0.00 ATOM 277 OG SER 34 -3.814 11.249 12.102 1.00 0.00 ATOM 278 N ASP 35 -0.654 11.939 10.894 1.00 0.00 ATOM 279 CA ASP 35 0.627 11.664 11.493 1.00 0.00 ATOM 280 C ASP 35 1.746 12.483 10.830 1.00 0.00 ATOM 281 O ASP 35 2.692 11.957 10.244 1.00 0.00 ATOM 282 CB ASP 35 0.919 10.124 11.472 1.00 0.00 ATOM 283 CG ASP 35 -0.326 9.242 11.364 1.00 0.00 ATOM 284 OD1 ASP 35 -0.544 8.413 12.278 1.00 0.00 ATOM 285 OD2 ASP 35 -1.051 9.330 10.330 1.00 0.00 ATOM 286 N THR 36 1.659 13.827 10.917 1.00 0.00 ATOM 287 CA THR 36 2.512 14.786 10.198 1.00 0.00 ATOM 288 C THR 36 2.276 14.714 8.688 1.00 0.00 ATOM 289 O THR 36 1.159 14.453 8.249 1.00 0.00 ATOM 290 CB THR 36 4.002 14.752 10.567 1.00 0.00 ATOM 291 CG2 THR 36 4.647 16.140 10.422 1.00 0.00 ATOM 292 OG1 THR 36 4.165 14.406 11.934 1.00 0.00 ATOM 293 N LYS 37 3.276 14.978 7.820 1.00 0.00 ATOM 294 CA LYS 37 3.142 14.844 6.381 1.00 0.00 ATOM 295 C LYS 37 4.476 14.411 5.813 1.00 0.00 ATOM 296 O LYS 37 5.529 14.878 6.236 1.00 0.00 ATOM 297 CB LYS 37 2.693 16.150 5.663 1.00 0.00 ATOM 298 CG LYS 37 1.175 16.412 5.707 1.00 0.00 ATOM 299 CD LYS 37 0.361 15.466 4.799 1.00 0.00 ATOM 300 CE LYS 37 -0.987 15.021 5.387 1.00 0.00 ATOM 301 NZ LYS 37 -0.778 13.994 6.420 1.00 0.00 ATOM 302 N TYR 38 4.442 13.486 4.837 1.00 0.00 ATOM 303 CA TYR 38 5.600 13.007 4.119 1.00 0.00 ATOM 304 C TYR 38 5.031 12.341 2.875 1.00 0.00 ATOM 305 O TYR 38 3.827 12.071 2.835 1.00 0.00 ATOM 306 CB TYR 38 6.440 12.013 4.979 1.00 0.00 ATOM 307 CG TYR 38 7.689 11.547 4.275 1.00 0.00 ATOM 308 CD1 TYR 38 8.659 12.474 3.854 1.00 0.00 ATOM 309 CD2 TYR 38 7.870 10.186 3.976 1.00 0.00 ATOM 310 CE1 TYR 38 9.777 12.048 3.122 1.00 0.00 ATOM 311 CE2 TYR 38 8.988 9.762 3.245 1.00 0.00 ATOM 312 CZ TYR 38 9.937 10.692 2.815 1.00 0.00 ATOM 313 OH TYR 38 11.050 10.255 2.073 1.00 0.00 ATOM 314 N THR 39 5.858 12.061 1.845 1.00 0.00 ATOM 315 CA THR 39 5.478 11.324 0.639 1.00 0.00 ATOM 316 C THR 39 6.721 10.993 -0.146 1.00 0.00 ATOM 317 O THR 39 7.421 11.883 -0.619 1.00 0.00 ATOM 318 CB THR 39 4.487 12.020 -0.303 1.00 0.00 ATOM 319 CG2 THR 39 4.377 11.348 -1.686 1.00 0.00 ATOM 320 OG1 THR 39 3.179 11.950 0.247 1.00 0.00 ATOM 321 N LEU 40 7.020 9.686 -0.287 1.00 0.00 ATOM 322 CA LEU 40 8.027 9.168 -1.192 1.00 0.00 ATOM 323 C LEU 40 7.367 8.415 -2.345 1.00 0.00 ATOM 324 O LEU 40 7.276 8.937 -3.452 1.00 0.00 ATOM 325 CB LEU 40 9.018 8.265 -0.416 1.00 0.00 ATOM 326 CG LEU 40 10.179 7.659 -1.234 1.00 0.00 ATOM 327 CD1 LEU 40 11.108 8.741 -1.806 1.00 0.00 ATOM 328 CD2 LEU 40 10.978 6.681 -0.359 1.00 0.00 ATOM 329 N CYS 41 6.899 7.166 -2.123 1.00 0.00 ATOM 330 CA CYS 41 6.403 6.297 -3.179 1.00 0.00 ATOM 331 C CYS 41 5.018 5.725 -2.807 1.00 0.00 ATOM 332 CB CYS 41 7.384 5.116 -3.404 1.00 0.00 ATOM 333 SG CYS 41 6.947 4.061 -4.829 1.00 0.00 ATOM 334 OXT CYS 41 4.055 5.843 -3.615 1.00 0.00 TER END