####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS458_1 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS458_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 1 - 23 4.91 12.84 LONGEST_CONTINUOUS_SEGMENT: 23 19 - 41 4.97 13.63 LCS_AVERAGE: 56.10 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 1 - 17 1.98 15.68 LCS_AVERAGE: 29.74 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 2 - 16 0.68 16.25 LCS_AVERAGE: 22.37 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 17 23 3 3 4 11 15 15 16 17 19 19 19 21 23 26 29 29 30 30 31 31 LCS_GDT Q 2 Q 2 15 17 23 7 11 15 15 15 15 16 17 19 19 19 21 23 26 29 29 30 30 31 31 LCS_GDT E 3 E 3 15 17 23 9 14 15 15 15 15 16 17 19 19 19 21 23 25 25 27 29 30 31 31 LCS_GDT T 4 T 4 15 17 23 9 14 15 15 15 15 16 17 19 19 19 21 23 26 29 29 30 30 31 31 LCS_GDT R 5 R 5 15 17 23 9 14 15 15 15 15 16 17 19 19 19 21 23 26 29 29 30 30 31 31 LCS_GDT K 6 K 6 15 17 23 9 14 15 15 15 15 16 17 19 19 19 21 23 26 29 29 30 30 31 31 LCS_GDT K 7 K 7 15 17 23 9 14 15 15 15 15 16 17 19 19 19 21 23 26 29 29 30 30 31 31 LCS_GDT C 8 C 8 15 17 23 9 14 15 15 15 15 16 17 19 19 19 21 23 26 29 29 30 30 31 31 LCS_GDT T 9 T 9 15 17 23 9 14 15 15 15 15 16 17 19 19 19 21 23 26 29 29 30 30 31 31 LCS_GDT E 10 E 10 15 17 23 9 14 15 15 15 15 16 17 19 19 19 21 23 26 29 29 30 30 31 31 LCS_GDT M 11 M 11 15 17 23 9 14 15 15 15 15 16 17 19 19 19 21 23 26 29 29 30 30 31 31 LCS_GDT K 12 K 12 15 17 23 9 14 15 15 15 15 16 17 19 19 19 21 23 26 29 29 30 30 31 31 LCS_GDT K 13 K 13 15 17 23 9 14 15 15 15 15 16 17 19 19 19 21 23 26 29 29 30 30 31 31 LCS_GDT K 14 K 14 15 17 23 9 14 15 15 15 15 16 17 19 19 19 21 23 26 29 29 30 30 31 31 LCS_GDT F 15 F 15 15 17 23 8 14 15 15 15 15 16 17 19 19 19 21 23 26 29 29 30 30 31 31 LCS_GDT K 16 K 16 15 17 23 4 14 15 15 15 15 16 17 19 19 19 21 23 25 28 28 30 30 31 31 LCS_GDT N 17 N 17 4 17 23 3 4 6 7 7 11 16 17 19 19 19 21 23 24 24 26 28 29 31 31 LCS_GDT C 18 C 18 6 8 23 3 5 6 7 8 10 16 17 19 19 19 21 23 24 24 26 28 28 28 29 LCS_GDT E 19 E 19 6 8 23 3 5 6 7 8 9 14 17 19 19 19 21 23 24 24 26 28 28 28 29 LCS_GDT V 20 V 20 6 8 23 3 5 6 7 8 8 10 11 13 17 19 21 23 24 24 26 28 28 28 29 LCS_GDT R 21 R 21 6 8 23 3 5 5 7 8 8 10 11 14 17 19 21 22 24 24 26 28 28 28 29 LCS_GDT C 22 C 22 6 8 23 3 5 6 7 8 8 11 13 15 16 18 18 20 21 22 26 26 27 28 29 LCS_GDT D 23 D 23 6 8 23 3 5 6 7 8 8 10 11 13 15 17 18 20 21 22 26 26 27 28 29 LCS_GDT E 24 E 24 4 8 23 3 3 4 5 8 8 11 13 15 16 18 18 20 21 22 26 26 27 28 29 LCS_GDT S 25 S 25 4 10 23 3 3 6 9 9 9 12 13 15 17 19 21 22 23 24 26 28 28 28 29 LCS_GDT N 26 N 26 4 10 23 3 3 6 8 8 9 11 13 15 17 19 21 23 24 24 26 28 28 30 31 LCS_GDT H 27 H 27 6 10 23 3 6 8 9 11 12 12 13 15 17 19 21 23 24 29 29 30 30 31 31 LCS_GDT C 28 C 28 7 10 23 4 6 8 9 11 12 12 13 15 16 19 21 23 26 29 29 30 30 31 31 LCS_GDT V 29 V 29 7 10 23 4 6 8 9 11 12 12 13 15 16 18 21 23 24 29 29 30 30 31 31 LCS_GDT E 30 E 30 7 10 23 4 6 8 9 11 12 12 13 15 16 19 21 23 26 29 29 30 30 31 31 LCS_GDT V 31 V 31 7 10 23 4 6 8 9 11 12 12 13 15 16 18 21 23 26 29 29 30 30 31 31 LCS_GDT R 32 R 32 7 10 23 3 6 8 9 11 12 12 13 15 16 18 21 23 26 29 29 30 30 31 31 LCS_GDT C 33 C 33 7 10 23 3 6 8 9 11 12 12 13 15 16 19 21 23 26 29 29 30 30 31 31 LCS_GDT S 34 S 34 7 10 23 3 6 8 9 11 12 12 13 15 16 19 21 23 26 29 29 30 30 31 31 LCS_GDT D 35 D 35 5 10 23 3 5 5 7 11 12 12 13 15 16 19 21 23 26 29 29 30 30 31 31 LCS_GDT T 36 T 36 6 10 23 4 6 8 8 11 12 12 13 15 16 19 21 23 26 29 29 30 30 31 31 LCS_GDT K 37 K 37 6 8 23 4 6 8 8 9 10 11 13 15 16 19 21 23 26 29 29 30 30 31 31 LCS_GDT Y 38 Y 38 6 8 23 4 6 8 8 11 12 12 13 15 16 19 21 23 26 29 29 30 30 31 31 LCS_GDT T 39 T 39 6 7 23 4 6 8 8 9 12 12 13 15 16 19 21 23 26 29 29 30 30 31 31 LCS_GDT L 40 L 40 6 6 23 4 6 8 8 9 9 11 12 15 16 19 21 23 26 29 29 30 30 31 31 LCS_GDT C 41 C 41 6 6 23 0 3 8 8 9 9 11 12 15 16 19 21 23 26 29 29 30 30 31 31 LCS_AVERAGE LCS_A: 36.07 ( 22.37 29.74 56.10 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 14 15 15 15 15 16 17 19 19 19 21 23 26 29 29 30 30 31 31 GDT PERCENT_AT 21.95 34.15 36.59 36.59 36.59 36.59 39.02 41.46 46.34 46.34 46.34 51.22 56.10 63.41 70.73 70.73 73.17 73.17 75.61 75.61 GDT RMS_LOCAL 0.32 0.58 0.68 0.68 0.68 0.68 1.18 1.98 3.02 3.02 3.02 3.98 4.45 5.15 5.66 5.66 5.81 5.74 6.05 5.97 GDT RMS_ALL_AT 16.44 16.36 16.25 16.25 16.25 16.25 16.18 15.68 13.89 13.89 13.89 12.78 11.99 11.50 10.87 10.87 10.83 11.31 10.83 11.00 # Checking swapping # possible swapping detected: E 10 E 10 # possible swapping detected: D 23 D 23 # possible swapping detected: E 30 E 30 # possible swapping detected: D 35 D 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 3.513 0 0.018 0.657 6.098 7.727 6.364 4.507 LGA Q 2 Q 2 1.670 0 0.228 0.901 6.005 58.182 33.737 6.005 LGA E 3 E 3 1.184 0 0.065 0.980 4.355 65.455 43.636 3.391 LGA T 4 T 4 1.214 0 0.032 1.081 3.212 65.455 53.247 2.898 LGA R 5 R 5 0.778 0 0.014 1.004 5.008 81.818 56.529 3.992 LGA K 6 K 6 0.524 0 0.027 1.225 6.442 81.818 50.303 6.408 LGA K 7 K 7 0.879 0 0.040 0.780 3.516 81.818 52.929 3.516 LGA C 8 C 8 1.359 0 0.041 0.738 4.498 65.455 53.030 4.498 LGA T 9 T 9 1.148 0 0.025 0.927 3.429 69.545 58.961 1.765 LGA E 10 E 10 0.558 0 0.035 0.647 1.783 95.455 75.556 1.783 LGA M 11 M 11 0.782 0 0.059 1.399 5.223 78.182 58.409 5.223 LGA K 12 K 12 1.781 0 0.026 0.853 5.899 51.364 38.182 5.899 LGA K 13 K 13 1.726 0 0.016 1.170 5.234 54.545 38.990 5.234 LGA K 14 K 14 0.716 0 0.040 0.701 3.174 86.364 65.455 3.174 LGA F 15 F 15 0.924 0 0.489 1.450 6.351 58.182 33.223 6.351 LGA K 16 K 16 1.381 0 0.600 1.151 8.140 58.636 27.273 8.140 LGA N 17 N 17 5.773 0 0.606 1.212 10.446 4.545 2.273 10.446 LGA C 18 C 18 9.416 0 0.031 0.054 10.057 0.000 0.000 9.817 LGA E 19 E 19 12.685 0 0.167 0.967 13.706 0.000 0.000 13.706 LGA V 20 V 20 13.954 0 0.127 1.066 15.484 0.000 0.000 15.484 LGA R 21 R 21 15.741 0 0.041 1.041 17.864 0.000 0.000 17.864 LGA C 22 C 22 18.187 0 0.674 1.127 19.681 0.000 0.000 17.817 LGA D 23 D 23 21.535 0 0.098 0.181 26.573 0.000 0.000 26.573 LGA E 24 E 24 21.075 0 0.624 0.957 21.540 0.000 0.000 19.533 LGA S 25 S 25 21.117 0 0.581 0.917 23.129 0.000 0.000 18.102 LGA N 26 N 26 24.080 0 0.550 0.813 26.786 0.000 0.000 25.821 LGA H 27 H 27 18.799 0 0.532 0.708 20.302 0.000 0.000 14.652 LGA C 28 C 28 19.119 0 0.089 0.745 19.351 0.000 0.000 19.351 LGA V 29 V 29 19.083 0 0.067 0.994 20.205 0.000 0.000 20.205 LGA E 30 E 30 19.557 0 0.120 0.949 21.964 0.000 0.000 21.964 LGA V 31 V 31 20.082 0 0.041 1.084 20.927 0.000 0.000 20.921 LGA R 32 R 32 20.082 0 0.155 1.212 20.946 0.000 0.000 17.236 LGA C 33 C 33 20.966 0 0.470 0.793 22.045 0.000 0.000 21.244 LGA S 34 S 34 23.390 0 0.212 0.667 25.884 0.000 0.000 22.484 LGA D 35 D 35 27.942 0 0.122 0.905 29.000 0.000 0.000 26.189 LGA T 36 T 36 27.748 0 0.235 0.348 28.361 0.000 0.000 28.361 LGA K 37 K 37 26.764 0 0.065 1.622 29.246 0.000 0.000 27.695 LGA Y 38 Y 38 24.147 0 0.037 1.366 24.484 0.000 0.000 24.484 LGA T 39 T 39 20.773 0 0.122 0.964 24.481 0.000 0.000 24.481 LGA L 40 L 40 16.078 0 0.255 0.441 17.089 0.000 0.000 14.021 LGA C 41 C 41 16.159 0 0.252 0.756 18.427 0.000 0.000 18.427 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 9.752 9.543 11.079 25.965 18.246 4.745 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 17 1.98 45.732 40.502 0.818 LGA_LOCAL RMSD: 1.978 Number of atoms: 17 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 15.682 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 9.752 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.647735 * X + -0.254428 * Y + -0.718127 * Z + 1.853976 Y_new = 0.331712 * X + 0.754375 * Y + -0.566468 * Z + -3.635221 Z_new = 0.685862 * X + -0.605132 * Y + -0.404238 * Z + 8.255131 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.668304 -0.755788 -2.159733 [DEG: 152.8825 -43.3034 -123.7436 ] ZXZ: -0.902914 1.986942 2.293742 [DEG: -51.7332 113.8434 131.4218 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS458_1 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS458_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 17 1.98 40.502 9.75 REMARK ---------------------------------------------------------- MOLECULE T0955TS458_1 PFRMAT TS TARGET T0955 MODEL 1 PARENT N/A ATOM 1 CB SER 1 -1.864 -12.482 -1.140 1.00 4.10 C ATOM 2 OG SER 1 -0.581 -13.082 -1.215 1.00 4.10 O ATOM 4 C SER 1 -1.740 -11.885 1.297 1.00 4.10 C ATOM 5 O SER 1 -1.809 -10.648 1.302 1.00 4.10 O ATOM 8 N SER 1 -3.936 -12.261 0.209 1.00 4.10 N ATOM 10 CA SER 1 -2.508 -12.689 0.240 1.00 4.10 C ATOM 11 N GLN 2 -1.031 -12.587 2.191 1.00 2.82 N ATOM 13 CA GLN 2 -0.220 -11.967 3.260 1.00 2.82 C ATOM 14 CB GLN 2 0.170 -12.982 4.359 1.00 2.82 C ATOM 15 CG GLN 2 0.722 -14.370 3.913 1.00 2.82 C ATOM 16 CD GLN 2 2.247 -14.440 3.887 1.00 2.82 C ATOM 17 OE1 GLN 2 2.884 -14.718 4.902 1.00 2.82 O ATOM 18 NE2 GLN 2 2.833 -14.188 2.721 1.00 2.82 N ATOM 21 C GLN 2 1.018 -11.217 2.743 1.00 2.82 C ATOM 22 O GLN 2 1.350 -10.151 3.267 1.00 2.82 O ATOM 23 N GLU 3 1.659 -11.764 1.699 1.00 3.12 N ATOM 25 CA GLU 3 2.859 -11.173 1.065 1.00 3.12 C ATOM 26 CB GLU 3 3.540 -12.169 0.100 1.00 3.12 C ATOM 27 CG GLU 3 2.632 -12.925 -0.895 1.00 3.12 C ATOM 28 CD GLU 3 3.409 -13.872 -1.789 1.00 3.12 C ATOM 29 OE1 GLU 3 3.848 -13.441 -2.875 1.00 3.12 O ATOM 30 OE2 GLU 3 3.578 -15.049 -1.406 1.00 3.12 O ATOM 31 C GLU 3 2.566 -9.826 0.374 1.00 3.12 C ATOM 32 O GLU 3 3.348 -8.877 0.513 1.00 3.12 O ATOM 33 N THR 4 1.430 -9.756 -0.339 1.00 4.07 N ATOM 35 CA THR 4 0.965 -8.537 -1.035 1.00 4.07 C ATOM 36 CB THR 4 -0.233 -8.816 -2.001 1.00 4.07 C ATOM 37 OG1 THR 4 -1.321 -9.401 -1.275 1.00 4.07 O ATOM 39 CG2 THR 4 0.186 -9.746 -3.137 1.00 4.07 C ATOM 40 C THR 4 0.557 -7.498 0.028 1.00 4.07 C ATOM 41 O THR 4 0.827 -6.302 -0.131 1.00 4.07 O ATOM 42 N ARG 5 -0.047 -7.994 1.123 1.00 3.26 N ATOM 44 CA ARG 5 -0.490 -7.187 2.279 1.00 3.26 C ATOM 45 CB ARG 5 -1.396 -8.002 3.208 1.00 3.26 C ATOM 46 CG ARG 5 -2.854 -8.064 2.758 1.00 3.26 C ATOM 47 CD ARG 5 -3.720 -8.886 3.713 1.00 3.26 C ATOM 48 NE ARG 5 -3.916 -8.232 5.010 1.00 3.26 N ATOM 50 CZ ARG 5 -4.623 -8.733 6.024 1.00 3.26 C ATOM 51 NH1 ARG 5 -4.728 -8.044 7.152 1.00 3.26 N ATOM 54 NH2 ARG 5 -5.226 -9.914 5.926 1.00 3.26 N ATOM 57 C ARG 5 0.704 -6.620 3.063 1.00 3.26 C ATOM 58 O ARG 5 0.640 -5.483 3.539 1.00 3.26 O ATOM 59 N LYS 6 1.785 -7.413 3.168 1.00 2.30 N ATOM 61 CA LYS 6 3.042 -7.033 3.853 1.00 2.30 C ATOM 62 CB LYS 6 3.990 -8.233 3.982 1.00 2.30 C ATOM 63 CG LYS 6 3.653 -9.191 5.112 1.00 2.30 C ATOM 64 CD LYS 6 4.594 -10.385 5.122 1.00 2.30 C ATOM 65 CE LYS 6 4.212 -11.379 6.204 1.00 2.30 C ATOM 66 NZ LYS 6 5.126 -12.554 6.227 1.00 2.30 N ATOM 70 C LYS 6 3.728 -5.913 3.056 1.00 2.30 C ATOM 71 O LYS 6 4.251 -4.958 3.644 1.00 2.30 O ATOM 72 N LYS 7 3.677 -6.040 1.721 1.00 3.51 N ATOM 74 CA LYS 7 4.233 -5.074 0.753 1.00 3.51 C ATOM 75 CB LYS 7 4.226 -5.668 -0.661 1.00 3.51 C ATOM 76 CG LYS 7 5.286 -6.735 -0.906 1.00 3.51 C ATOM 77 CD LYS 7 5.213 -7.272 -2.332 1.00 3.51 C ATOM 78 CE LYS 7 6.266 -8.346 -2.599 1.00 3.51 C ATOM 79 NZ LYS 7 7.664 -7.820 -2.615 1.00 3.51 N ATOM 83 C LYS 7 3.415 -3.770 0.785 1.00 3.51 C ATOM 84 O LYS 7 3.979 -2.669 0.727 1.00 3.51 O ATOM 85 N CYS 8 2.090 -3.931 0.929 1.00 3.58 N ATOM 87 CA CYS 8 1.090 -2.849 1.007 1.00 3.58 C ATOM 88 CB CYS 8 -0.323 -3.441 0.900 1.00 3.58 C ATOM 89 SG CYS 8 -0.781 -3.997 -0.758 1.00 3.58 S ATOM 90 C CYS 8 1.216 -2.033 2.307 1.00 3.58 C ATOM 91 O CYS 8 1.158 -0.799 2.276 1.00 3.58 O ATOM 92 N THR 9 1.410 -2.746 3.429 1.00 2.64 N ATOM 94 CA THR 9 1.563 -2.170 4.780 1.00 2.64 C ATOM 95 CB THR 9 1.402 -3.257 5.886 1.00 2.64 C ATOM 96 OG1 THR 9 2.228 -4.386 5.585 1.00 2.64 O ATOM 98 CG2 THR 9 -0.054 -3.692 6.016 1.00 2.64 C ATOM 99 C THR 9 2.881 -1.388 4.964 1.00 2.64 C ATOM 100 O THR 9 2.871 -0.299 5.553 1.00 2.64 O ATOM 101 N GLU 10 3.994 -1.934 4.442 1.00 3.03 N ATOM 103 CA GLU 10 5.325 -1.294 4.512 1.00 3.03 C ATOM 104 CB GLU 10 6.464 -2.296 4.203 1.00 3.03 C ATOM 105 CG GLU 10 6.526 -2.898 2.791 1.00 3.03 C ATOM 106 CD GLU 10 7.685 -3.860 2.616 1.00 3.03 C ATOM 107 OE1 GLU 10 8.780 -3.410 2.220 1.00 3.03 O ATOM 108 OE2 GLU 10 7.499 -5.069 2.871 1.00 3.03 O ATOM 109 C GLU 10 5.400 -0.026 3.629 1.00 3.03 C ATOM 110 O GLU 10 6.029 0.967 4.014 1.00 3.03 O ATOM 111 N MET 11 4.737 -0.087 2.462 1.00 3.59 N ATOM 113 CA MET 11 4.652 1.018 1.482 1.00 3.59 C ATOM 114 CG MET 11 4.518 1.209 -1.126 1.00 3.59 C ATOM 115 SD MET 11 3.943 2.915 -1.351 1.00 3.59 S ATOM 116 CE MET 11 2.564 2.672 -2.478 1.00 3.59 C ATOM 117 C MET 11 3.802 2.152 2.098 1.00 3.59 C ATOM 118 O MET 11 4.113 3.338 1.922 1.00 3.59 O ATOM 119 CB MET 11 4.027 0.518 0.165 1.00 3.59 C ATOM 120 N LYS 12 2.751 1.749 2.831 1.00 2.81 N ATOM 122 CA LYS 12 1.815 2.645 3.538 1.00 2.81 C ATOM 123 CB LYS 12 0.595 1.851 4.036 1.00 2.81 C ATOM 124 CG LYS 12 -0.750 2.575 3.906 1.00 2.81 C ATOM 125 CD LYS 12 -1.895 1.711 4.423 1.00 2.81 C ATOM 126 CE LYS 12 -3.247 2.413 4.303 1.00 2.81 C ATOM 127 NZ LYS 12 -3.703 2.593 2.892 1.00 2.81 N ATOM 131 C LYS 12 2.529 3.334 4.718 1.00 2.81 C ATOM 132 O LYS 12 2.271 4.509 4.996 1.00 2.81 O ATOM 133 N LYS 13 3.435 2.594 5.379 1.00 2.51 N ATOM 135 CA LYS 13 4.225 3.073 6.534 1.00 2.51 C ATOM 136 CB LYS 13 4.971 1.893 7.194 1.00 2.51 C ATOM 137 CG LYS 13 5.551 2.164 8.594 1.00 2.51 C ATOM 138 CD LYS 13 6.609 1.133 8.968 1.00 2.51 C ATOM 139 CE LYS 13 7.332 1.498 10.264 1.00 2.51 C ATOM 140 NZ LYS 13 8.209 2.701 10.141 1.00 2.51 N ATOM 144 C LYS 13 5.228 4.170 6.109 1.00 2.51 C ATOM 145 O LYS 13 5.308 5.212 6.770 1.00 2.51 O ATOM 146 N LYS 14 5.972 3.927 5.018 1.00 3.65 N ATOM 148 CA LYS 14 6.962 4.886 4.490 1.00 3.65 C ATOM 149 CB LYS 14 8.018 4.211 3.584 1.00 3.65 C ATOM 150 CG LYS 14 7.528 3.349 2.413 1.00 3.65 C ATOM 151 CD LYS 14 8.704 2.903 1.548 1.00 3.65 C ATOM 152 CE LYS 14 8.279 1.975 0.416 1.00 3.65 C ATOM 153 NZ LYS 14 7.917 0.606 0.887 1.00 3.65 N ATOM 157 C LYS 14 6.382 6.162 3.846 1.00 3.65 C ATOM 158 O LYS 14 6.921 7.251 4.058 1.00 3.65 O ATOM 159 N PHE 15 5.295 6.010 3.074 1.00 3.26 N ATOM 161 CA PHE 15 4.611 7.126 2.385 1.00 3.26 C ATOM 162 CB PHE 15 3.630 6.567 1.315 1.00 3.26 C ATOM 163 CG PHE 15 3.347 7.509 0.139 1.00 3.26 C ATOM 164 CD1 PHE 15 4.141 7.464 -1.033 1.00 3.26 C ATOM 165 CD2 PHE 15 2.262 8.419 0.183 1.00 3.26 C ATOM 166 CE1 PHE 15 3.861 8.308 -2.143 1.00 3.26 C ATOM 167 CE2 PHE 15 1.970 9.269 -0.919 1.00 3.26 C ATOM 168 CZ PHE 15 2.773 9.213 -2.085 1.00 3.26 C ATOM 169 C PHE 15 3.876 8.085 3.357 1.00 3.26 C ATOM 170 O PHE 15 4.060 9.303 3.268 1.00 3.26 O ATOM 171 N LYS 16 3.085 7.516 4.284 1.00 2.32 N ATOM 173 CA LYS 16 2.297 8.237 5.317 1.00 2.32 C ATOM 174 CB LYS 16 1.085 8.987 4.715 1.00 2.32 C ATOM 175 CG LYS 16 1.336 10.450 4.374 1.00 2.32 C ATOM 176 CD LYS 16 0.090 11.103 3.785 1.00 2.32 C ATOM 177 CE LYS 16 0.320 12.572 3.434 1.00 2.32 C ATOM 178 NZ LYS 16 0.503 13.450 4.628 1.00 2.32 N ATOM 182 C LYS 16 1.801 7.255 6.399 1.00 2.32 C ATOM 183 O LYS 16 0.920 6.423 6.133 1.00 2.32 O ATOM 184 N ASN 17 2.385 7.345 7.604 1.00 1.48 N ATOM 186 CA ASN 17 2.026 6.489 8.751 1.00 1.48 C ATOM 187 CB ASN 17 3.264 5.706 9.259 1.00 1.48 C ATOM 188 CG ASN 17 2.896 4.463 10.073 1.00 1.48 C ATOM 189 OD1 ASN 17 2.700 3.379 9.523 1.00 1.48 O ATOM 190 ND2 ASN 17 2.814 4.622 11.391 1.00 1.48 N ATOM 193 C ASN 17 1.396 7.352 9.871 1.00 1.48 C ATOM 194 O ASN 17 2.087 8.158 10.512 1.00 1.48 O ATOM 195 N CYS 18 0.073 7.205 10.047 1.00 1.72 N ATOM 197 CA CYS 18 -0.721 7.928 11.058 1.00 1.72 C ATOM 198 CB CYS 18 -1.561 9.038 10.403 1.00 1.72 C ATOM 199 SG CYS 18 -0.592 10.291 9.532 1.00 1.72 S ATOM 200 C CYS 18 -1.649 6.963 11.809 1.00 1.72 C ATOM 201 O CYS 18 -2.112 5.976 11.227 1.00 1.72 O ATOM 202 N GLU 19 -1.913 7.278 13.092 1.00 1.79 N ATOM 204 CA GLU 19 -2.777 6.533 14.053 1.00 1.79 C ATOM 205 CB GLU 19 -4.146 7.248 14.258 1.00 1.79 C ATOM 206 CG GLU 19 -4.992 7.596 12.997 1.00 1.79 C ATOM 207 CD GLU 19 -6.032 6.536 12.648 1.00 1.79 C ATOM 208 OE1 GLU 19 -5.718 5.637 11.841 1.00 1.79 O ATOM 209 OE2 GLU 19 -7.158 6.608 13.184 1.00 1.79 O ATOM 210 C GLU 19 -2.972 4.998 13.942 1.00 1.79 C ATOM 211 O GLU 19 -3.341 4.487 12.877 1.00 1.79 O ATOM 212 N VAL 20 -2.737 4.295 15.061 1.00 1.61 N ATOM 214 CA VAL 20 -2.868 2.827 15.168 1.00 1.61 C ATOM 215 CB VAL 20 -1.505 2.157 15.677 1.00 1.61 C ATOM 216 CG1 VAL 20 -1.137 2.595 17.110 1.00 1.61 C ATOM 217 CG2 VAL 20 -1.533 0.626 15.530 1.00 1.61 C ATOM 218 C VAL 20 -4.096 2.461 16.046 1.00 1.61 C ATOM 219 O VAL 20 -4.379 3.152 17.035 1.00 1.61 O ATOM 220 N ARG 21 -4.805 1.390 15.660 1.00 1.28 N ATOM 222 CA ARG 21 -6.001 0.894 16.368 1.00 1.28 C ATOM 223 CB ARG 21 -7.189 0.743 15.401 1.00 1.28 C ATOM 224 CG ARG 21 -7.750 2.063 14.865 1.00 1.28 C ATOM 225 CD ARG 21 -8.929 1.847 13.917 1.00 1.28 C ATOM 226 NE ARG 21 -10.130 1.360 14.603 1.00 1.28 N ATOM 228 CZ ARG 21 -11.297 1.095 14.013 1.00 1.28 C ATOM 229 NH1 ARG 21 -11.461 1.261 12.704 1.00 1.28 N ATOM 232 NH2 ARG 21 -12.313 0.657 14.744 1.00 1.28 N ATOM 235 C ARG 21 -5.735 -0.444 17.079 1.00 1.28 C ATOM 236 O ARG 21 -5.063 -1.323 16.523 1.00 1.28 O ATOM 237 N CYS 22 -6.249 -0.567 18.312 1.00 2.26 N ATOM 239 CA CYS 22 -6.105 -1.767 19.157 1.00 2.26 C ATOM 240 CB CYS 22 -5.389 -1.407 20.472 1.00 2.26 C ATOM 241 SG CYS 22 -4.947 -2.818 21.521 1.00 2.26 S ATOM 242 C CYS 22 -7.481 -2.388 19.457 1.00 2.26 C ATOM 243 O CYS 22 -7.566 -3.573 19.813 1.00 2.26 O ATOM 244 N ASP 23 -8.543 -1.590 19.275 1.00 1.75 N ATOM 246 CA ASP 23 -9.943 -1.995 19.519 1.00 1.75 C ATOM 247 CB ASP 23 -10.762 -0.794 20.026 1.00 1.75 C ATOM 248 CG ASP 23 -10.311 -0.304 21.400 1.00 1.75 C ATOM 249 OD1 ASP 23 -10.850 -0.791 22.417 1.00 1.75 O ATOM 250 OD2 ASP 23 -9.430 0.582 21.461 1.00 1.75 O ATOM 251 C ASP 23 -10.628 -2.611 18.286 1.00 1.75 C ATOM 252 O ASP 23 -10.220 -2.344 17.151 1.00 1.75 O ATOM 253 N GLU 24 -11.668 -3.430 18.533 1.00 1.85 N ATOM 255 CA GLU 24 -12.496 -4.151 17.524 1.00 1.85 C ATOM 256 CB GLU 24 -13.377 -3.189 16.696 1.00 1.85 C ATOM 257 CG GLU 24 -14.482 -2.497 17.488 1.00 1.85 C ATOM 258 CD GLU 24 -15.320 -1.563 16.634 1.00 1.85 C ATOM 259 OE1 GLU 24 -14.965 -0.370 16.530 1.00 1.85 O ATOM 260 OE2 GLU 24 -16.335 -2.022 16.068 1.00 1.85 O ATOM 261 C GLU 24 -11.746 -5.120 16.590 1.00 1.85 C ATOM 262 O GLU 24 -10.702 -4.763 16.028 1.00 1.85 O ATOM 263 N SER 25 -12.301 -6.337 16.437 1.00 1.61 N ATOM 265 CA SER 25 -11.786 -7.459 15.602 1.00 1.61 C ATOM 266 CB SER 25 -12.125 -7.261 14.109 1.00 1.61 C ATOM 267 OG SER 25 -11.590 -6.046 13.613 1.00 1.61 O ATOM 269 C SER 25 -10.300 -7.848 15.775 1.00 1.61 C ATOM 270 O SER 25 -9.409 -7.000 15.629 1.00 1.61 O ATOM 271 N ASN 26 -10.060 -9.126 16.103 1.00 2.03 N ATOM 273 CA ASN 26 -8.710 -9.681 16.309 1.00 2.03 C ATOM 274 CB ASN 26 -8.589 -10.328 17.707 1.00 2.03 C ATOM 275 CG ASN 26 -8.719 -9.317 18.841 1.00 2.03 C ATOM 276 OD1 ASN 26 -9.817 -9.061 19.339 1.00 2.03 O ATOM 277 ND2 ASN 26 -7.591 -8.753 19.265 1.00 2.03 N ATOM 280 C ASN 26 -8.311 -10.681 15.203 1.00 2.03 C ATOM 281 O ASN 26 -8.677 -11.865 15.253 1.00 2.03 O ATOM 282 N HIS 27 -7.612 -10.165 14.180 1.00 1.18 N ATOM 284 CA HIS 27 -7.121 -10.941 13.023 1.00 1.18 C ATOM 285 CG HIS 27 -7.988 -11.832 10.775 1.00 1.18 C ATOM 286 CD2 HIS 27 -8.938 -12.718 10.389 1.00 1.18 C ATOM 287 ND1 HIS 27 -6.872 -12.118 10.017 1.00 1.18 N ATOM 289 CE1 HIS 27 -7.134 -13.130 9.209 1.00 1.18 C ATOM 290 NE2 HIS 27 -8.381 -13.512 9.415 1.00 1.18 N ATOM 292 C HIS 27 -5.689 -10.458 12.732 1.00 1.18 C ATOM 293 O HIS 27 -5.422 -9.251 12.790 1.00 1.18 O ATOM 294 CB HIS 27 -8.025 -10.716 11.783 1.00 1.18 C ATOM 295 N CYS 28 -4.785 -11.408 12.425 1.00 1.55 N ATOM 297 CA CYS 28 -3.345 -11.192 12.105 1.00 1.55 C ATOM 298 CB CYS 28 -3.140 -10.686 10.659 1.00 1.55 C ATOM 299 SG CYS 28 -3.887 -9.079 10.286 1.00 1.55 S ATOM 300 C CYS 28 -2.503 -10.344 13.080 1.00 1.55 C ATOM 301 O CYS 28 -3.003 -9.366 13.648 1.00 1.55 O ATOM 302 N VAL 29 -1.229 -10.727 13.252 1.00 2.96 N ATOM 304 CA VAL 29 -0.274 -10.024 14.133 1.00 2.96 C ATOM 305 CB VAL 29 0.463 -10.996 15.139 1.00 2.96 C ATOM 306 CG1 VAL 29 -0.469 -11.351 16.287 1.00 2.96 C ATOM 307 CG2 VAL 29 0.947 -12.292 14.446 1.00 2.96 C ATOM 308 C VAL 29 0.737 -9.252 13.263 1.00 2.96 C ATOM 309 O VAL 29 1.339 -9.827 12.344 1.00 2.96 O ATOM 310 N GLU 30 0.876 -7.948 13.535 1.00 2.85 N ATOM 312 CA GLU 30 1.773 -7.070 12.771 1.00 2.85 C ATOM 313 CB GLU 30 0.970 -6.051 11.915 1.00 2.85 C ATOM 314 CG GLU 30 -0.147 -5.215 12.622 1.00 2.85 C ATOM 315 CD GLU 30 -1.526 -5.871 12.590 1.00 2.85 C ATOM 316 OE1 GLU 30 -1.795 -6.739 13.447 1.00 2.85 O ATOM 317 OE2 GLU 30 -2.336 -5.511 11.710 1.00 2.85 O ATOM 318 C GLU 30 2.885 -6.336 13.525 1.00 2.85 C ATOM 319 O GLU 30 2.638 -5.687 14.550 1.00 2.85 O ATOM 320 N VAL 31 4.112 -6.508 13.019 1.00 3.41 N ATOM 322 CA VAL 31 5.329 -5.842 13.507 1.00 3.41 C ATOM 323 CB VAL 31 6.297 -6.837 14.316 1.00 3.41 C ATOM 324 CG1 VAL 31 6.772 -8.034 13.476 1.00 3.41 C ATOM 325 CG2 VAL 31 7.461 -6.073 14.958 1.00 3.41 C ATOM 326 C VAL 31 5.896 -5.270 12.182 1.00 3.41 C ATOM 327 O VAL 31 6.054 -6.016 11.204 1.00 3.41 O ATOM 328 N ARG 32 6.138 -3.955 12.148 1.00 2.85 N ATOM 330 CA ARG 32 6.636 -3.271 10.943 1.00 2.85 C ATOM 331 CB ARG 32 5.643 -2.168 10.493 1.00 2.85 C ATOM 332 CG ARG 32 5.099 -1.221 11.595 1.00 2.85 C ATOM 333 CD ARG 32 3.626 -0.853 11.383 1.00 2.85 C ATOM 334 NE ARG 32 3.381 -0.088 10.156 1.00 2.85 N ATOM 336 CZ ARG 32 2.175 0.243 9.691 1.00 2.85 C ATOM 337 NH1 ARG 32 1.067 -0.111 10.335 1.00 2.85 N ATOM 340 NH2 ARG 32 2.075 0.931 8.561 1.00 2.85 N ATOM 343 C ARG 32 8.086 -2.761 11.039 1.00 2.85 C ATOM 344 O ARG 32 8.440 -2.046 11.987 1.00 2.85 O ATOM 345 N CYS 33 8.905 -3.165 10.058 1.00 2.61 N ATOM 347 CA CYS 33 10.332 -2.810 9.963 1.00 2.61 C ATOM 348 CB CYS 33 11.198 -4.044 10.236 1.00 2.61 C ATOM 349 SG CYS 33 12.931 -3.669 10.604 1.00 2.61 S ATOM 350 C CYS 33 10.682 -2.241 8.581 1.00 2.61 C ATOM 351 O CYS 33 9.887 -2.366 7.640 1.00 2.61 O ATOM 352 N SER 34 11.869 -1.622 8.477 1.00 3.28 N ATOM 354 CA SER 34 12.392 -1.020 7.236 1.00 3.28 C ATOM 355 CB SER 34 12.212 0.508 7.255 1.00 3.28 C ATOM 356 OG SER 34 12.782 1.085 8.419 1.00 3.28 O ATOM 358 C SER 34 13.873 -1.380 7.006 1.00 3.28 C ATOM 359 O SER 34 14.329 -1.415 5.855 1.00 3.28 O ATOM 360 N ASP 35 14.601 -1.662 8.099 1.00 4.85 N ATOM 362 CA ASP 35 16.036 -2.017 8.068 1.00 4.85 C ATOM 363 CB ASP 35 16.820 -1.203 9.117 1.00 4.85 C ATOM 364 CG ASP 35 16.834 0.293 8.822 1.00 4.85 C ATOM 365 OD1 ASP 35 17.762 0.759 8.126 1.00 4.85 O ATOM 366 OD2 ASP 35 15.926 1.008 9.302 1.00 4.85 O ATOM 367 C ASP 35 16.318 -3.523 8.244 1.00 4.85 C ATOM 368 O ASP 35 16.990 -4.123 7.398 1.00 4.85 O ATOM 369 N THR 36 15.803 -4.113 9.336 1.00 5.37 N ATOM 371 CA THR 36 15.958 -5.548 9.674 1.00 5.37 C ATOM 372 CB THR 36 16.137 -5.740 11.221 1.00 5.37 C ATOM 373 OG1 THR 36 16.813 -4.600 11.767 1.00 5.37 O ATOM 375 CG2 THR 36 16.979 -6.988 11.527 1.00 5.37 C ATOM 376 C THR 36 14.685 -6.279 9.173 1.00 5.37 C ATOM 377 O THR 36 13.774 -5.613 8.665 1.00 5.37 O ATOM 378 N LYS 37 14.631 -7.618 9.283 1.00 4.72 N ATOM 380 CA LYS 37 13.449 -8.369 8.823 1.00 4.72 C ATOM 381 CB LYS 37 13.868 -9.636 8.062 1.00 4.72 C ATOM 382 CG LYS 37 14.531 -9.381 6.712 1.00 4.72 C ATOM 383 CD LYS 37 14.913 -10.688 6.026 1.00 4.72 C ATOM 384 CE LYS 37 15.579 -10.456 4.671 1.00 4.72 C ATOM 385 NZ LYS 37 14.652 -9.908 3.636 1.00 4.72 N ATOM 389 C LYS 37 12.446 -8.735 9.932 1.00 4.72 C ATOM 390 O LYS 37 12.782 -9.405 10.918 1.00 4.72 O ATOM 391 N TYR 38 11.226 -8.216 9.750 1.00 3.38 N ATOM 393 CA TYR 38 10.040 -8.404 10.600 1.00 3.38 C ATOM 394 CB TYR 38 9.790 -7.204 11.548 1.00 3.38 C ATOM 395 CG TYR 38 10.686 -7.159 12.798 1.00 3.38 C ATOM 396 CD1 TYR 38 10.345 -7.878 13.974 1.00 3.38 C ATOM 397 CE1 TYR 38 11.161 -7.824 15.138 1.00 3.38 C ATOM 398 CD2 TYR 38 11.874 -6.386 12.824 1.00 3.38 C ATOM 399 CE2 TYR 38 12.695 -6.328 13.985 1.00 3.38 C ATOM 400 CZ TYR 38 12.330 -7.049 15.132 1.00 3.38 C ATOM 401 OH TYR 38 13.120 -6.997 16.258 1.00 3.38 O ATOM 403 C TYR 38 8.853 -8.668 9.675 1.00 3.38 C ATOM 404 O TYR 38 8.863 -8.196 8.530 1.00 3.38 O ATOM 405 N THR 39 7.844 -9.410 10.150 1.00 2.82 N ATOM 407 CA THR 39 6.661 -9.754 9.339 1.00 2.82 C ATOM 408 CB THR 39 6.263 -11.245 9.514 1.00 2.82 C ATOM 409 OG1 THR 39 6.205 -11.572 10.909 1.00 2.82 O ATOM 411 CG2 THR 39 7.264 -12.159 8.816 1.00 2.82 C ATOM 412 C THR 39 5.458 -8.858 9.690 1.00 2.82 C ATOM 413 O THR 39 5.200 -8.567 10.867 1.00 2.82 O ATOM 414 N LEU 40 4.765 -8.406 8.635 1.00 1.25 N ATOM 416 CA LEU 40 3.611 -7.493 8.713 1.00 1.25 C ATOM 417 CB LEU 40 3.836 -6.289 7.758 1.00 1.25 C ATOM 418 CG LEU 40 5.102 -5.406 7.852 1.00 1.25 C ATOM 419 CD1 LEU 40 6.248 -5.938 6.967 1.00 1.25 C ATOM 420 CD2 LEU 40 4.763 -3.995 7.421 1.00 1.25 C ATOM 421 C LEU 40 2.282 -8.192 8.382 1.00 1.25 C ATOM 422 O LEU 40 2.274 -9.372 8.011 1.00 1.25 O ATOM 423 N CYS 41 1.174 -7.450 8.522 1.00 0.93 N ATOM 425 CA CYS 41 -0.195 -7.929 8.269 1.00 0.93 C ATOM 426 CB CYS 41 -1.174 -7.172 9.169 1.00 0.93 C ATOM 427 SG CYS 41 -1.107 -5.368 9.017 1.00 0.93 S ATOM 428 C CYS 41 -0.631 -7.818 6.804 1.00 0.93 C ATOM 429 O CYS 41 -1.419 -8.681 6.360 1.00 0.93 O ATOM 430 OXT CYS 41 -0.172 -6.878 6.121 1.00 0.93 O TER 431 CYS 41 END