####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2019 # # # # Adam Zemla (zemla1@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 37 ( 271), selected 33 , name T1271s8TS235_1-D1 # Molecule2: number of CA atoms 33 ( 245), selected 33 , name T1271s8-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1271s8TS235_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 12 - 33 4.05 9.35 LCS_AVERAGE: 56.57 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 13 - 30 1.65 10.96 LCS_AVERAGE: 35.08 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 14 - 29 0.65 12.15 LCS_AVERAGE: 28.65 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 33 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT R 12 R 12 4 4 22 3 4 4 4 7 10 13 17 18 20 20 21 21 22 22 23 26 27 28 30 LCS_GDT D 13 D 13 4 18 22 3 4 7 13 16 17 18 18 18 20 20 21 21 22 22 23 26 27 28 30 LCS_GDT P 14 P 14 16 18 22 3 8 15 16 16 17 18 18 18 20 20 21 21 22 22 23 23 24 28 29 LCS_GDT L 15 L 15 16 18 22 13 15 15 16 16 17 18 18 18 20 20 21 21 22 22 23 26 27 28 30 LCS_GDT Q 16 Q 16 16 18 22 13 15 15 16 16 17 18 18 18 20 20 21 21 22 22 23 26 27 28 30 LCS_GDT R 17 R 17 16 18 22 13 15 15 16 16 17 18 18 18 20 20 21 21 22 22 23 26 27 28 30 LCS_GDT A 18 A 18 16 18 22 13 15 15 16 16 17 18 18 18 20 20 21 21 22 22 23 26 27 28 30 LCS_GDT V 19 V 19 16 18 22 13 15 15 16 16 17 18 18 18 20 20 21 21 22 22 23 26 27 28 30 LCS_GDT D 20 D 20 16 18 22 13 15 15 16 16 17 18 18 18 20 20 21 21 22 22 23 26 27 28 30 LCS_GDT V 21 V 21 16 18 22 13 15 15 16 16 17 18 18 18 20 20 21 21 22 22 23 26 27 28 30 LCS_GDT A 22 A 22 16 18 22 13 15 15 16 16 17 18 18 18 20 20 21 21 22 22 23 26 27 28 30 LCS_GDT Y 23 Y 23 16 18 22 13 15 15 16 16 17 18 18 18 20 20 21 21 22 22 23 26 27 28 30 LCS_GDT A 24 A 24 16 18 22 13 15 15 16 16 17 18 18 18 20 20 21 21 22 22 23 26 27 28 30 LCS_GDT S 25 S 25 16 18 22 13 15 15 16 16 17 18 18 18 20 20 21 21 22 22 23 26 27 28 30 LCS_GDT G 26 G 26 16 18 22 13 15 15 16 16 17 18 18 18 20 20 21 21 22 22 23 26 27 28 30 LCS_GDT M 27 M 27 16 18 22 13 15 15 16 16 17 18 18 18 20 20 21 21 22 22 23 26 27 28 30 LCS_GDT L 28 L 28 16 18 22 12 15 15 16 16 17 18 18 18 20 20 21 21 22 22 23 26 27 28 30 LCS_GDT L 29 L 29 16 18 22 6 15 15 16 16 17 18 18 18 20 20 21 21 22 22 23 26 27 28 30 LCS_GDT G 30 G 30 4 18 22 3 4 8 14 16 17 18 18 18 20 20 21 21 22 22 23 26 27 28 30 LCS_GDT S 31 S 31 4 5 22 3 4 4 5 5 7 10 17 17 20 20 21 21 22 22 23 26 27 28 30 LCS_GDT G 32 G 32 4 5 22 3 4 4 5 5 7 8 9 9 12 13 18 21 22 22 23 26 27 28 30 LCS_GDT S 33 S 33 3 5 22 3 3 4 5 5 7 8 9 9 12 12 14 15 16 20 22 26 27 28 30 LCS_GDT T 38 T 38 3 5 16 0 3 3 5 5 7 8 9 9 10 11 14 15 16 18 20 22 26 28 30 LCS_GDT H 39 H 39 3 3 14 0 3 3 3 3 4 4 5 9 9 11 14 15 16 18 19 22 23 25 25 LCS_GDT F 40 F 40 3 3 14 0 3 3 3 3 4 4 5 7 7 8 12 14 15 18 20 22 24 28 30 LCS_GDT S 41 S 41 3 3 14 0 3 3 3 3 4 5 6 7 9 11 14 15 16 18 20 26 27 28 30 LCS_GDT E 42 E 42 3 4 14 0 2 3 4 4 4 5 6 7 9 11 14 15 16 18 20 22 26 28 30 LCS_GDT T 43 T 43 3 4 10 0 2 3 4 4 4 5 6 7 8 8 9 12 13 16 18 20 22 25 27 LCS_GDT T 44 T 44 3 4 10 0 3 3 4 4 4 5 6 7 8 8 9 11 13 16 20 22 27 28 30 LCS_GDT A 45 A 45 3 4 10 3 3 3 4 4 4 5 6 7 9 11 14 15 17 19 23 26 27 28 30 LCS_GDT F 46 F 46 3 3 10 3 3 3 3 3 4 5 6 7 8 8 10 13 15 18 22 26 27 28 30 LCS_GDT T 47 T 47 3 3 10 3 3 3 3 3 4 5 6 7 8 8 10 13 15 17 22 26 27 28 30 LCS_GDT S 48 S 48 3 3 10 3 3 3 3 3 4 4 6 9 13 20 21 21 22 22 23 26 27 28 30 LCS_AVERAGE LCS_A: 40.10 ( 28.65 35.08 56.57 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 13 15 15 16 16 17 18 18 18 20 20 21 21 22 22 23 26 27 28 30 GDT PERCENT_AT 39.39 45.45 45.45 48.48 48.48 51.52 54.55 54.55 54.55 60.61 60.61 63.64 63.64 66.67 66.67 69.70 78.79 81.82 84.85 90.91 GDT RMS_LOCAL 0.29 0.43 0.43 0.65 0.65 1.32 1.65 1.65 1.65 2.78 2.78 3.23 3.23 3.65 3.65 4.32 5.99 6.22 6.22 7.03 GDT RMS_ALL_AT 12.16 12.22 12.22 12.15 12.15 11.18 10.96 10.96 10.96 9.68 9.68 9.31 9.31 9.12 9.12 8.78 7.93 7.89 7.99 7.61 # Checking swapping # possible swapping detected: F 40 F 40 # possible swapping detected: F 46 F 46 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA R 12 R 12 8.547 0 0.004 1.084 19.793 1.364 0.496 19.415 LGA D 13 D 13 3.890 0 0.098 0.266 9.874 15.000 7.500 9.874 LGA P 14 P 14 2.725 0 0.631 0.628 5.080 49.545 32.208 5.080 LGA L 15 L 15 0.365 0 0.064 1.259 3.747 91.364 68.409 3.747 LGA Q 16 Q 16 0.997 0 0.040 0.441 2.580 81.818 66.869 2.580 LGA R 17 R 17 1.027 0 0.032 1.365 5.346 73.636 51.240 5.346 LGA A 18 A 18 0.740 0 0.018 0.010 0.849 81.818 81.818 - LGA V 19 V 19 0.254 0 0.041 0.037 0.680 100.000 97.403 0.680 LGA D 20 D 20 0.748 0 0.005 0.744 2.798 81.818 62.045 2.491 LGA V 21 V 21 0.722 0 0.010 0.046 1.295 81.818 77.143 1.295 LGA A 22 A 22 0.423 0 0.051 0.053 0.694 95.455 96.364 - LGA Y 23 Y 23 0.700 0 0.025 0.142 1.553 86.364 76.667 1.350 LGA A 24 A 24 0.944 0 0.000 0.015 1.166 77.727 75.273 - LGA S 25 S 25 0.695 0 0.032 0.535 2.867 86.364 75.758 2.867 LGA G 26 G 26 0.675 0 0.065 0.065 1.262 82.273 82.273 - LGA M 27 M 27 0.940 0 0.182 0.403 3.073 73.636 63.864 3.073 LGA L 28 L 28 1.257 0 0.565 0.558 2.338 58.636 66.136 0.776 LGA L 29 L 29 2.238 0 0.304 0.435 8.866 34.545 17.500 8.866 LGA G 30 G 30 3.542 0 0.161 0.161 5.010 15.909 15.909 - LGA S 31 S 31 8.639 0 0.174 0.221 12.563 0.000 0.000 12.563 LGA G 32 G 32 10.796 0 0.266 0.266 11.214 0.000 0.000 - LGA S 33 S 33 14.123 1 0.196 0.603 18.227 0.000 0.000 18.227 LGA T 38 T 38 22.740 0 0.084 0.462 23.784 0.000 0.000 19.530 LGA H 39 H 39 23.278 0 0.593 0.607 30.307 0.000 0.000 29.749 LGA F 40 F 40 18.440 0 0.598 1.036 19.621 0.000 0.000 18.989 LGA S 41 S 41 18.385 0 0.556 0.752 22.037 0.000 0.000 22.037 LGA E 42 E 42 20.316 0 0.553 1.246 26.527 0.000 0.000 26.073 LGA T 43 T 43 18.464 0 0.680 0.585 22.158 0.000 0.000 18.630 LGA T 44 T 44 13.984 0 0.623 0.552 14.382 0.000 0.000 11.672 LGA A 45 A 45 15.180 0 0.582 0.580 17.407 0.000 0.000 - LGA F 46 F 46 15.356 0 0.641 0.428 19.053 0.000 0.000 19.053 LGA T 47 T 47 14.111 0 0.588 0.458 16.676 0.000 0.000 13.998 LGA S 48 S 48 9.913 1 0.630 0.823 11.419 0.000 0.000 10.357 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 33 132 132 100.00 245 243 99.18 33 26 SUMMARY(RMSD_GDC): 7.591 7.309 8.753 38.457 33.784 16.014 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 37 33 4.0 18 1.65 54.545 49.918 1.029 LGA_LOCAL RMSD: 1.649 Number of atoms: 18 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.958 Number of assigned atoms: 33 Std_ASGN_ATOMS RMSD: 7.591 Standard rmsd on all 33 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.037293 * X + -0.621939 * Y + -0.782177 * Z + 215.554337 Y_new = -0.216063 * X + -0.759189 * Y + 0.613962 * Z + 198.280701 Z_new = -0.975667 * X + 0.191896 * Y + -0.106065 * Z + 223.315308 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.741717 1.349743 2.075726 [DEG: -99.7930 77.3346 118.9304 ] ZXZ: -2.236286 1.677061 -1.376593 [DEG: -128.1298 96.0885 -78.8730 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T1271s8TS235_1-D1 REMARK 2: T1271s8-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1271s8TS235_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 37 33 4.0 18 1.65 49.918 7.59 REMARK ---------------------------------------------------------- MOLECULE T1271s8TS235_1-D1 PFRMAT TS TARGET T1271s8 MODEL 1 PARENT N/A ATOM 96 N ARG 12 212.259 184.108 237.581 1.00 38.10 N ATOM 97 CA ARG 12 212.069 185.566 237.746 1.00 41.28 C ATOM 98 C ARG 12 211.059 186.018 236.700 1.00 41.25 C ATOM 99 O ARG 12 211.217 185.649 235.536 1.00 38.81 O ATOM 100 CB ARG 12 213.372 186.372 237.572 1.00 39.80 C ATOM 101 CG ARG 12 214.219 186.400 238.849 1.00 36.42 C ATOM 102 CD ARG 12 215.267 187.514 238.825 1.00 35.09 C ATOM 103 NE ARG 12 216.029 187.538 240.090 1.00 33.56 N ATOM 104 CZ ARG 12 217.126 188.240 240.331 1.00 32.15 C ATOM 105 NH1 ARG 12 217.682 188.979 239.418 1.00 30.69 N ATOM 106 NH2 ARG 12 217.684 188.206 241.501 1.00 30.00 N ATOM 107 N ASP 13 210.071 186.788 237.126 1.00 46.76 N ATOM 108 CA ASP 13 209.005 187.315 236.271 1.00 52.02 C ATOM 109 C ASP 13 209.602 188.028 235.042 1.00 52.74 C ATOM 110 O ASP 13 210.528 188.829 235.188 1.00 51.08 O ATOM 111 CB ASP 13 208.111 188.250 237.104 1.00 50.12 C ATOM 112 CG ASP 13 207.512 187.516 238.309 1.00 45.30 C ATOM 113 OD1 ASP 13 206.957 186.415 238.095 1.00 42.24 O ATOM 114 OD2 ASP 13 207.752 187.978 239.448 1.00 41.59 O ATOM 115 N PRO 14 209.131 187.718 233.821 1.00 49.01 N ATOM 116 CA PRO 14 209.715 188.246 232.586 1.00 50.60 C ATOM 117 C PRO 14 209.642 189.776 232.483 1.00 52.34 C ATOM 118 O PRO 14 210.574 190.389 231.967 1.00 51.41 O ATOM 119 CB PRO 14 208.954 187.543 231.449 1.00 47.88 C ATOM 120 CG PRO 14 207.652 187.085 232.088 1.00 45.44 C ATOM 121 CD PRO 14 208.035 186.816 233.537 1.00 46.98 C ATOM 122 N LEU 15 208.612 190.395 233.058 1.00 48.19 N ATOM 123 CA LEU 15 208.493 191.858 233.147 1.00 50.49 C ATOM 124 C LEU 15 209.458 192.451 234.169 1.00 52.18 C ATOM 125 O LEU 15 210.118 193.452 233.873 1.00 51.58 O ATOM 126 CB LEU 15 207.044 192.220 233.476 1.00 48.95 C ATOM 127 CG LEU 15 206.215 192.381 232.191 1.00 43.95 C ATOM 128 CD1 LEU 15 204.752 192.153 232.448 1.00 40.72 C ATOM 129 CD2 LEU 15 206.388 193.800 231.614 1.00 41.66 C ATOM 130 N GLN 16 209.639 191.808 235.315 1.00 49.72 N ATOM 131 CA GLN 16 210.635 192.209 236.302 1.00 53.20 C ATOM 132 C GLN 16 212.045 192.157 235.694 1.00 54.29 C ATOM 133 O GLN 16 212.838 193.072 235.895 1.00 55.35 O ATOM 134 CB GLN 16 210.527 191.291 237.535 1.00 52.97 C ATOM 135 CG GLN 16 211.176 191.909 238.792 1.00 49.17 C ATOM 136 CD GLN 16 210.329 193.009 239.430 1.00 46.62 C ATOM 137 NE2 GLN 16 210.936 194.022 239.992 1.00 42.97 N ATOM 138 OE1 GLN 16 209.113 192.970 239.444 1.00 44.30 O ATOM 139 N ARG 17 212.336 191.159 234.847 1.00 52.30 N ATOM 140 CA ARG 17 213.599 191.081 234.101 1.00 55.87 C ATOM 141 C ARG 17 213.757 192.199 233.073 1.00 54.86 C ATOM 142 O ARG 17 214.860 192.714 232.956 1.00 54.70 O ATOM 143 CB ARG 17 213.718 189.739 233.383 1.00 55.31 C ATOM 144 CG ARG 17 214.238 188.677 234.349 1.00 51.17 C ATOM 145 CD ARG 17 214.390 187.365 233.585 1.00 49.87 C ATOM 146 NE ARG 17 215.125 186.391 234.381 1.00 46.57 N ATOM 147 CZ ARG 17 215.290 185.127 234.095 1.00 42.55 C ATOM 148 NH1 ARG 17 214.766 184.575 233.034 1.00 41.89 N ATOM 149 NH2 ARG 17 216.016 184.393 234.889 1.00 40.43 N ATOM 150 N ALA 18 212.709 192.548 232.343 1.00 54.50 N ATOM 151 CA ALA 18 212.769 193.652 231.387 1.00 54.90 C ATOM 152 C ALA 18 213.033 194.989 232.095 1.00 54.47 C ATOM 153 O ALA 18 213.861 195.774 231.644 1.00 54.28 O ATOM 154 CB ALA 18 211.467 193.666 230.577 1.00 53.34 C ATOM 155 N VAL 19 212.405 195.203 233.257 1.00 50.66 N ATOM 156 CA VAL 19 212.633 196.361 234.123 1.00 52.69 C ATOM 157 C VAL 19 214.046 196.329 234.733 1.00 53.28 C ATOM 158 O VAL 19 214.756 197.322 234.646 1.00 52.31 O ATOM 159 CB VAL 19 211.539 196.455 235.203 1.00 51.30 C ATOM 160 CG1 VAL 19 211.804 197.571 236.216 1.00 45.95 C ATOM 161 CG2 VAL 19 210.173 196.747 234.556 1.00 46.04 C ATOM 162 N ASP 20 214.503 195.187 235.243 1.00 49.17 N ATOM 163 CA ASP 20 215.845 195.022 235.798 1.00 52.70 C ATOM 164 C ASP 20 216.937 195.245 234.734 1.00 51.10 C ATOM 165 O ASP 20 217.954 195.875 235.009 1.00 52.01 O ATOM 166 CB ASP 20 216.016 193.616 236.408 1.00 53.28 C ATOM 167 CG ASP 20 215.302 193.385 237.749 1.00 48.27 C ATOM 168 OD1 ASP 20 214.903 194.374 238.397 1.00 45.98 O ATOM 169 OD2 ASP 20 215.233 192.194 238.152 1.00 46.53 O ATOM 170 N VAL 21 216.719 194.784 233.491 1.00 54.43 N ATOM 171 CA VAL 21 217.621 195.042 232.356 1.00 55.74 C ATOM 172 C VAL 21 217.614 196.523 231.961 1.00 55.39 C ATOM 173 O VAL 21 218.672 197.086 231.667 1.00 53.74 O ATOM 174 CB VAL 21 217.267 194.134 231.159 1.00 53.29 C ATOM 175 CG1 VAL 21 217.993 194.513 229.862 1.00 48.04 C ATOM 176 CG2 VAL 21 217.656 192.677 231.458 1.00 48.17 C ATOM 177 N ALA 22 216.456 197.193 232.009 1.00 49.65 N ATOM 178 CA ALA 22 216.367 198.631 231.765 1.00 51.26 C ATOM 179 C ALA 22 217.031 199.469 232.879 1.00 50.61 C ATOM 180 O ALA 22 217.641 200.502 232.593 1.00 50.29 O ATOM 181 CB ALA 22 214.890 198.991 231.564 1.00 49.88 C ATOM 182 N TYR 23 216.995 199.007 234.132 1.00 46.09 N ATOM 183 CA TYR 23 217.754 199.603 235.239 1.00 49.05 C ATOM 184 C TYR 23 219.261 199.332 235.115 1.00 47.72 C ATOM 185 O TYR 23 220.061 200.257 235.234 1.00 47.78 O ATOM 186 CB TYR 23 217.208 199.099 236.589 1.00 49.09 C ATOM 187 CG TYR 23 216.201 200.039 237.214 1.00 46.07 C ATOM 188 CD1 TYR 23 216.654 201.174 237.920 1.00 43.84 C ATOM 189 CD2 TYR 23 214.814 199.800 237.107 1.00 43.67 C ATOM 190 CE1 TYR 23 215.731 202.062 238.504 1.00 41.28 C ATOM 191 CE2 TYR 23 213.884 200.680 237.686 1.00 42.16 C ATOM 192 CZ TYR 23 214.342 201.813 238.385 1.00 42.51 C ATOM 193 OH TYR 23 213.453 202.675 238.933 1.00 42.62 O ATOM 194 N ALA 24 219.655 198.091 234.817 1.00 48.96 N ATOM 195 CA ALA 24 221.060 197.701 234.666 1.00 49.88 C ATOM 196 C ALA 24 221.741 198.350 233.447 1.00 48.08 C ATOM 197 O ALA 24 222.949 198.568 233.465 1.00 45.53 O ATOM 198 CB ALA 24 221.127 196.165 234.579 1.00 48.40 C ATOM 199 N SER 25 220.975 198.706 232.415 1.00 44.31 N ATOM 200 CA SER 25 221.466 199.434 231.233 1.00 45.66 C ATOM 201 C SER 25 221.539 200.953 231.428 1.00 44.87 C ATOM 202 O SER 25 221.899 201.663 230.499 1.00 43.11 O ATOM 203 CB SER 25 220.648 199.062 229.994 1.00 44.10 C ATOM 204 OG SER 25 219.275 199.281 230.192 1.00 40.45 O ATOM 205 N GLY 26 221.201 201.468 232.614 1.00 44.77 N ATOM 206 CA GLY 26 221.262 202.893 232.931 1.00 46.59 C ATOM 207 C GLY 26 220.176 203.743 232.254 1.00 45.82 C ATOM 208 O GLY 26 220.199 204.965 232.388 1.00 43.80 O ATOM 209 N MET 27 219.213 203.136 231.567 1.00 40.76 N ATOM 210 CA MET 27 218.146 203.864 230.866 1.00 42.12 C ATOM 211 C MET 27 217.093 204.485 231.806 1.00 42.06 C ATOM 212 O MET 27 216.282 205.292 231.359 1.00 40.71 O ATOM 213 CB MET 27 217.454 202.930 229.852 1.00 41.48 C ATOM 214 CG MET 27 218.375 202.485 228.719 1.00 37.91 C ATOM 215 SD MET 27 217.480 201.608 227.403 1.00 35.20 S ATOM 216 CE MET 27 218.862 201.037 226.411 1.00 31.77 C ATOM 217 N LEU 28 217.100 204.117 233.081 1.00 37.92 N ATOM 218 CA LEU 28 216.132 204.588 234.084 1.00 40.45 C ATOM 219 C LEU 28 216.748 205.471 235.181 1.00 39.99 C ATOM 220 O LEU 28 216.077 205.772 236.161 1.00 37.56 O ATOM 221 CB LEU 28 215.364 203.387 234.661 1.00 38.83 C ATOM 222 CG LEU 28 214.417 202.691 233.669 1.00 35.34 C ATOM 223 CD1 LEU 28 213.801 201.454 234.320 1.00 33.22 C ATOM 224 CD2 LEU 28 213.271 203.592 233.224 1.00 34.39 C ATOM 225 N LEU 29 217.995 205.937 235.023 1.00 31.32 N ATOM 226 CA LEU 29 218.563 206.959 235.909 1.00 32.93 C ATOM 227 C LEU 29 217.966 208.329 235.561 1.00 31.60 C ATOM 228 O LEU 29 218.600 209.192 234.956 1.00 29.53 O ATOM 229 CB LEU 29 220.102 206.908 235.874 1.00 31.64 C ATOM 230 CG LEU 29 220.692 205.744 236.695 1.00 28.79 C ATOM 231 CD1 LEU 29 222.147 205.504 236.303 1.00 26.11 C ATOM 232 CD2 LEU 29 220.654 206.031 238.200 1.00 27.79 C ATOM 233 N GLY 30 216.708 208.519 235.933 1.00 32.34 N ATOM 234 CA GLY 30 216.091 209.824 236.037 1.00 33.53 C ATOM 235 C GLY 30 216.791 210.635 237.124 1.00 31.94 C ATOM 236 O GLY 30 216.970 210.154 238.247 1.00 29.64 O ATOM 237 N SER 31 217.196 211.855 236.781 1.00 27.81 N ATOM 238 CA SER 31 217.759 212.858 237.683 1.00 29.76 C ATOM 239 C SER 31 216.883 213.028 238.927 1.00 28.63 C ATOM 240 O SER 31 215.847 213.689 238.892 1.00 26.60 O ATOM 241 CB SER 31 217.870 214.171 236.901 1.00 27.52 C ATOM 242 OG SER 31 218.462 215.179 237.681 1.00 25.05 O ATOM 243 N GLY 32 217.313 212.434 240.039 1.00 24.23 N ATOM 244 CA GLY 32 216.688 212.508 241.349 1.00 26.79 C ATOM 245 C GLY 32 217.745 212.770 242.411 1.00 26.41 C ATOM 246 O GLY 32 218.324 211.851 242.967 1.00 24.10 O ATOM 247 N SER 33 218.017 214.041 242.664 1.00 20.72 N ATOM 248 CA SER 33 218.793 214.499 243.816 1.00 24.30 C ATOM 249 C SER 33 218.123 214.030 245.113 1.00 24.17 C ATOM 250 O SER 33 217.051 214.522 245.460 1.00 22.80 O ATOM 251 CB SER 33 218.833 216.030 243.782 1.00 22.56 C ATOM 252 OG SER 33 219.423 216.573 244.933 1.00 20.17 O ATOM 253 N SER 34 218.788 213.154 245.880 1.00 19.24 N ATOM 254 CA SER 34 218.666 213.180 247.334 1.00 23.39 C ATOM 255 C SER 34 219.911 212.622 248.019 1.00 23.27 C ATOM 256 O SER 34 220.393 211.526 247.784 1.00 21.62 O ATOM 257 CB SER 34 217.375 212.530 247.862 1.00 21.42 C ATOM 258 OG SER 34 217.316 211.167 247.553 1.00 19.20 O ATOM 259 N ARG 35 220.429 213.483 248.866 1.00 18.36 N ATOM 260 CA ARG 35 221.538 213.375 249.812 1.00 22.35 C ATOM 261 C ARG 35 221.273 212.259 250.823 1.00 22.17 C ATOM 262 O ARG 35 220.230 212.272 251.462 1.00 21.07 O ATOM 263 CB ARG 35 221.518 214.779 250.463 1.00 21.21 C ATOM 264 CG ARG 35 222.707 215.261 251.241 1.00 18.81 C ATOM 265 CD ARG 35 222.365 216.702 251.674 1.00 17.12 C ATOM 266 NE ARG 35 223.485 217.407 252.310 1.00 16.03 N ATOM 267 CZ ARG 35 223.492 218.672 252.654 1.00 16.59 C ATOM 268 NH1 ARG 35 222.451 219.445 252.466 1.00 16.14 N ATOM 269 NH2 ARG 35 224.551 219.197 253.206 1.00 15.99 N ATOM 270 N GLY 36 222.217 211.337 250.996 1.00 20.09 N ATOM 271 CA GLY 36 222.133 210.298 252.022 1.00 23.64 C ATOM 272 C GLY 36 223.430 209.515 252.143 1.00 23.59 C ATOM 273 O GLY 36 223.679 208.584 251.390 1.00 21.95 O ATOM 274 N THR 37 224.280 209.936 253.071 1.00 19.63 N ATOM 275 CA THR 37 225.511 209.279 253.514 1.00 23.37 C ATOM 276 C THR 37 225.209 207.939 254.194 1.00 23.77 C ATOM 277 O THR 37 224.436 207.934 255.151 1.00 22.32 O ATOM 278 CB THR 37 226.161 210.167 254.591 1.00 21.25 C ATOM 279 CG2 THR 37 226.854 211.390 253.998 1.00 18.12 C ATOM 280 OG1 THR 37 225.173 210.639 255.484 1.00 18.94 O ATOM 281 N THR 38 225.897 206.852 253.804 1.00 19.08 N ATOM 282 CA THR 38 226.390 205.828 254.745 1.00 23.35 C ATOM 283 C THR 38 227.493 204.989 254.096 1.00 23.88 C ATOM 284 O THR 38 227.369 204.513 252.977 1.00 22.19 O ATOM 285 CB THR 38 225.310 204.884 255.332 1.00 20.86 C ATOM 286 CG2 THR 38 224.856 205.321 256.725 1.00 17.51 C ATOM 287 OG1 THR 38 224.168 204.806 254.526 1.00 18.36 O ATOM 288 N HIS 39 228.599 204.870 254.837 1.00 21.64 N ATOM 289 CA HIS 39 229.761 204.006 254.623 1.00 25.05 C ATOM 290 C HIS 39 229.375 202.517 254.605 1.00 24.34 C ATOM 291 O HIS 39 228.628 202.099 255.484 1.00 22.94 O ATOM 292 CB HIS 39 230.670 204.205 255.855 1.00 23.48 C ATOM 293 CG HIS 39 231.860 205.090 255.675 1.00 21.33 C ATOM 294 CD2 HIS 39 231.915 206.455 255.582 1.00 17.62 C ATOM 295 ND1 HIS 39 233.172 204.633 255.673 1.00 19.37 N ATOM 296 CE1 HIS 39 233.980 205.693 255.582 1.00 18.20 C ATOM 297 NE2 HIS 39 233.262 206.825 255.529 1.00 19.31 N ATOM 298 N PHE 40 229.991 201.696 253.739 1.00 18.49 N ATOM 299 CA PHE 40 230.798 200.533 254.150 1.00 22.05 C ATOM 300 C PHE 40 231.668 199.998 252.991 1.00 21.46 C ATOM 301 O PHE 40 231.350 200.178 251.823 1.00 20.42 O ATOM 302 CB PHE 40 229.993 199.409 254.826 1.00 20.86 C ATOM 303 CG PHE 40 230.555 199.051 256.195 1.00 19.25 C ATOM 304 CD1 PHE 40 231.509 198.028 256.333 1.00 17.38 C ATOM 305 CD2 PHE 40 230.178 199.790 257.329 1.00 17.28 C ATOM 306 CE1 PHE 40 232.072 197.749 257.584 1.00 16.76 C ATOM 307 CE2 PHE 40 230.745 199.514 258.590 1.00 17.19 C ATOM 308 CZ PHE 40 231.693 198.490 258.719 1.00 17.77 C ATOM 309 N SER 41 232.808 199.411 253.378 1.00 21.56 N ATOM 310 CA SER 41 234.056 199.223 252.627 1.00 25.96 C ATOM 311 C SER 41 234.126 197.990 251.704 1.00 25.26 C ATOM 312 O SER 41 233.493 196.980 251.983 1.00 24.22 O ATOM 313 CB SER 41 235.159 199.084 253.680 1.00 24.86 C ATOM 314 OG SER 41 235.205 200.213 254.524 1.00 21.95 O ATOM 315 N GLU 42 235.018 198.121 250.692 1.00 18.63 N ATOM 316 CA GLU 42 235.961 197.135 250.101 1.00 21.79 C ATOM 317 C GLU 42 235.451 195.717 249.753 1.00 21.39 C ATOM 318 O GLU 42 234.926 195.007 250.594 1.00 20.36 O ATOM 319 CB GLU 42 237.216 197.067 251.001 1.00 21.21 C ATOM 320 CG GLU 42 238.055 198.356 250.926 1.00 18.88 C ATOM 321 CD GLU 42 239.263 198.365 251.877 1.00 17.45 C ATOM 322 OE1 GLU 42 240.212 199.122 251.565 1.00 15.15 O ATOM 323 OE2 GLU 42 239.224 197.668 252.907 1.00 18.70 O ATOM 324 N THR 43 235.606 195.169 248.556 1.00 18.67 N ATOM 325 CA THR 43 236.771 194.945 247.665 1.00 23.19 C ATOM 326 C THR 43 236.174 194.378 246.344 1.00 23.03 C ATOM 327 O THR 43 235.118 193.770 246.380 1.00 21.84 O ATOM 328 CB THR 43 237.693 193.868 248.282 1.00 21.37 C ATOM 329 CG2 THR 43 238.889 194.438 249.039 1.00 18.97 C ATOM 330 OG1 THR 43 237.033 193.031 249.200 1.00 18.92 O ATOM 331 N THR 44 236.651 194.523 245.118 1.00 17.89 N ATOM 332 CA THR 44 237.981 194.389 244.528 1.00 21.91 C ATOM 333 C THR 44 237.973 195.040 243.132 1.00 22.31 C ATOM 334 O THR 44 236.948 195.114 242.456 1.00 20.90 O ATOM 335 CB THR 44 238.381 192.915 244.313 1.00 19.97 C ATOM 336 CG2 THR 44 239.377 192.417 245.346 1.00 16.61 C ATOM 337 OG1 THR 44 237.273 192.042 244.356 1.00 17.48 O ATOM 338 N ALA 45 239.136 195.506 242.713 1.00 17.32 N ATOM 339 CA ALA 45 239.412 196.336 241.560 1.00 19.60 C ATOM 340 C ALA 45 239.101 195.692 240.196 1.00 20.09 C ATOM 341 O ALA 45 239.588 194.618 239.877 1.00 18.99 O ATOM 342 CB ALA 45 240.901 196.687 241.661 1.00 18.38 C ATOM 343 N PHE 46 238.429 196.464 239.329 1.00 17.09 N ATOM 344 CA PHE 46 238.782 196.576 237.923 1.00 19.33 C ATOM 345 C PHE 46 238.782 198.070 237.566 1.00 19.32 C ATOM 346 O PHE 46 237.771 198.762 237.675 1.00 18.08 O ATOM 347 CB PHE 46 237.880 195.725 237.011 1.00 17.75 C ATOM 348 CG PHE 46 238.620 194.568 236.379 1.00 15.90 C ATOM 349 CD1 PHE 46 239.251 194.729 235.133 1.00 13.74 C ATOM 350 CD2 PHE 46 238.709 193.335 237.051 1.00 13.54 C ATOM 351 CE1 PHE 46 239.961 193.654 234.553 1.00 13.08 C ATOM 352 CE2 PHE 46 239.426 192.266 236.474 1.00 13.56 C ATOM 353 CZ PHE 46 240.052 192.428 235.225 1.00 14.18 C ATOM 354 N THR 47 239.962 198.567 237.222 1.00 19.28 N ATOM 355 CA THR 47 240.223 199.953 236.843 1.00 21.50 C ATOM 356 C THR 47 239.516 200.280 235.529 1.00 22.05 C ATOM 357 O THR 47 240.014 199.959 234.454 1.00 20.75 O ATOM 358 CB THR 47 241.741 200.157 236.675 1.00 19.89 C ATOM 359 CG2 THR 47 242.452 200.261 238.021 1.00 16.79 C ATOM 360 OG1 THR 47 242.298 199.052 236.000 1.00 17.59 O ATOM 361 N SER 48 238.361 200.943 235.608 1.00 18.06 N ATOM 362 CA SER 48 237.800 201.716 234.507 1.00 19.86 C ATOM 363 C SER 48 238.270 203.154 234.674 1.00 20.30 C ATOM 364 O SER 48 237.866 203.852 235.606 1.00 19.25 O ATOM 365 CB SER 48 236.274 201.605 234.466 1.00 18.48 C ATOM 366 OG SER 48 235.779 202.312 233.351 1.00 16.50 O TER END