####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2019 # # # # Adam Zemla (zemla1@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 37 ( 271), selected 33 , name T1271s8TS241_1-D1 # Molecule2: number of CA atoms 33 ( 245), selected 33 , name T1271s8-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1271s8TS241_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 12 - 33 3.69 11.64 LCS_AVERAGE: 62.17 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 13 - 31 1.63 12.34 LCS_AVERAGE: 40.96 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 14 - 30 0.66 12.48 LCS_AVERAGE: 33.15 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 33 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT R 12 R 12 4 4 22 3 4 4 4 4 4 10 13 17 18 19 21 21 22 22 24 25 25 27 28 LCS_GDT D 13 D 13 4 19 22 3 5 8 12 16 16 19 19 19 19 20 21 21 22 22 24 25 25 26 28 LCS_GDT P 14 P 14 17 19 22 3 9 17 17 17 18 19 19 19 19 20 21 21 22 22 24 25 25 27 28 LCS_GDT L 15 L 15 17 19 22 14 15 17 17 17 18 19 19 19 19 20 21 21 22 22 24 25 25 27 28 LCS_GDT Q 16 Q 16 17 19 22 14 15 17 17 17 18 19 19 19 19 20 21 21 22 22 24 25 25 27 28 LCS_GDT R 17 R 17 17 19 22 14 15 17 17 17 18 19 19 19 19 20 21 21 22 22 24 25 25 27 28 LCS_GDT A 18 A 18 17 19 22 14 15 17 17 17 18 19 19 19 19 20 21 21 22 22 24 25 25 27 28 LCS_GDT V 19 V 19 17 19 22 14 15 17 17 17 18 19 19 19 19 20 21 21 22 22 24 25 25 27 28 LCS_GDT D 20 D 20 17 19 22 14 15 17 17 17 18 19 19 19 19 20 21 21 22 22 24 25 25 27 28 LCS_GDT V 21 V 21 17 19 22 14 15 17 17 17 18 19 19 19 19 20 21 21 22 22 24 25 25 27 28 LCS_GDT A 22 A 22 17 19 22 14 15 17 17 17 18 19 19 19 19 20 21 21 22 22 24 25 25 27 28 LCS_GDT Y 23 Y 23 17 19 22 14 15 17 17 17 18 19 19 19 19 20 21 21 22 22 24 25 25 27 28 LCS_GDT A 24 A 24 17 19 22 14 15 17 17 17 18 19 19 19 19 20 21 21 22 22 24 25 25 27 28 LCS_GDT S 25 S 25 17 19 22 14 15 17 17 17 18 19 19 19 19 20 21 21 22 22 24 25 25 27 28 LCS_GDT G 26 G 26 17 19 22 14 15 17 17 17 18 19 19 19 19 20 21 21 22 22 24 25 25 27 28 LCS_GDT M 27 M 27 17 19 22 14 15 17 17 17 18 19 19 19 19 20 21 21 22 22 24 25 25 27 28 LCS_GDT L 28 L 28 17 19 22 14 15 17 17 17 18 19 19 19 19 20 21 21 22 22 24 25 25 27 28 LCS_GDT L 29 L 29 17 19 22 5 15 17 17 17 18 19 19 19 19 20 21 21 22 22 24 25 25 27 28 LCS_GDT G 30 G 30 17 19 22 5 10 17 17 17 18 19 19 19 19 20 21 21 22 22 24 25 25 27 28 LCS_GDT S 31 S 31 4 19 22 4 4 4 4 5 18 19 19 19 19 20 21 21 22 22 24 25 25 27 28 LCS_GDT G 32 G 32 4 4 22 4 4 4 4 4 6 7 9 11 14 16 18 21 22 22 24 25 25 27 28 LCS_GDT S 33 S 33 3 4 22 3 3 3 4 4 6 6 8 11 14 16 18 19 20 22 24 25 25 27 28 LCS_GDT T 38 T 38 3 3 18 0 3 3 3 3 4 7 10 10 11 11 13 13 15 17 19 23 25 26 27 LCS_GDT H 39 H 39 3 3 18 3 3 4 6 7 7 7 10 11 14 16 18 19 20 21 21 23 25 26 27 LCS_GDT F 40 F 40 3 3 18 3 3 4 6 7 7 8 10 11 14 16 18 19 20 21 21 23 25 27 28 LCS_GDT S 41 S 41 6 8 18 4 6 6 7 7 8 8 9 11 14 16 18 19 20 21 21 23 25 26 28 LCS_GDT E 42 E 42 6 8 18 4 6 6 7 7 8 8 10 11 14 16 18 19 20 21 21 23 25 26 26 LCS_GDT T 43 T 43 6 8 18 4 6 6 7 7 8 8 10 10 11 16 18 19 20 21 21 23 25 26 27 LCS_GDT T 44 T 44 6 8 18 4 6 6 7 7 8 8 10 11 14 16 18 19 20 22 24 25 25 27 28 LCS_GDT A 45 A 45 6 8 18 3 6 6 7 7 8 8 10 11 14 16 18 19 20 21 21 24 25 27 28 LCS_GDT F 46 F 46 6 8 18 3 6 6 7 7 8 8 10 11 14 16 18 19 20 21 21 24 25 27 28 LCS_GDT T 47 T 47 5 8 18 3 4 5 7 7 8 8 10 10 11 13 15 18 20 21 24 25 25 27 28 LCS_GDT S 48 S 48 3 8 13 0 4 4 6 7 8 8 10 13 19 20 21 21 22 22 24 25 25 27 28 LCS_AVERAGE LCS_A: 45.42 ( 33.15 40.96 62.17 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 14 15 17 17 17 18 19 19 19 19 20 21 21 22 22 24 25 25 27 28 GDT PERCENT_AT 42.42 45.45 51.52 51.52 51.52 54.55 57.58 57.58 57.58 57.58 60.61 63.64 63.64 66.67 66.67 72.73 75.76 75.76 81.82 84.85 GDT RMS_LOCAL 0.28 0.34 0.66 0.66 0.66 1.23 1.63 1.63 1.63 1.63 2.55 3.14 3.14 3.56 3.56 4.82 5.10 5.10 6.47 6.52 GDT RMS_ALL_AT 12.41 12.50 12.48 12.48 12.48 12.35 12.34 12.34 12.34 12.34 11.54 11.24 11.24 11.01 11.01 9.97 9.79 9.79 8.63 8.74 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA R 12 R 12 9.461 0 0.081 1.075 20.370 0.000 0.000 19.888 LGA D 13 D 13 4.307 0 0.077 0.843 9.421 9.545 4.773 9.421 LGA P 14 P 14 2.465 0 0.619 0.794 4.714 55.455 37.662 4.674 LGA L 15 L 15 0.307 0 0.075 0.065 1.573 91.364 80.682 1.124 LGA Q 16 Q 16 0.627 0 0.000 0.269 0.883 81.818 81.818 0.871 LGA R 17 R 17 0.763 0 0.000 1.000 2.794 81.818 61.653 2.794 LGA A 18 A 18 0.515 0 0.020 0.004 0.623 95.455 92.727 - LGA V 19 V 19 0.147 0 0.042 0.049 0.744 100.000 97.403 0.744 LGA D 20 D 20 0.543 0 0.000 0.788 2.616 86.364 67.955 2.268 LGA V 21 V 21 0.646 0 0.020 0.032 1.233 95.455 84.935 1.233 LGA A 22 A 22 0.314 0 0.000 0.013 0.417 100.000 100.000 - LGA Y 23 Y 23 0.392 0 0.031 0.254 1.195 90.909 83.636 1.195 LGA A 24 A 24 0.883 0 0.000 0.000 1.190 77.727 75.273 - LGA S 25 S 25 0.877 0 0.083 0.556 2.712 81.818 72.727 2.712 LGA G 26 G 26 0.563 0 0.020 0.020 0.653 90.909 90.909 - LGA M 27 M 27 0.337 0 0.032 0.399 2.155 95.455 85.455 2.155 LGA L 28 L 28 0.495 0 0.056 0.053 1.076 90.909 86.591 0.868 LGA L 29 L 29 1.541 0 0.029 0.070 2.882 61.818 47.273 2.882 LGA G 30 G 30 2.197 0 0.031 0.031 3.167 40.000 40.000 - LGA S 31 S 31 3.735 0 0.000 0.616 4.773 16.364 13.636 3.682 LGA G 32 G 32 9.429 0 0.663 0.663 10.492 0.000 0.000 - LGA S 33 S 33 12.379 1 0.597 0.559 16.233 0.000 0.000 13.266 LGA T 38 T 38 22.809 0 0.151 0.248 24.267 0.000 0.000 21.462 LGA H 39 H 39 23.389 0 0.586 1.157 30.210 0.000 0.000 30.210 LGA F 40 F 40 21.287 0 0.600 1.319 22.722 0.000 0.000 19.363 LGA S 41 S 41 24.473 0 0.561 0.548 25.439 0.000 0.000 25.439 LGA E 42 E 42 27.024 0 0.055 1.048 35.533 0.000 0.000 35.533 LGA T 43 T 43 21.829 0 0.040 0.188 24.431 0.000 0.000 20.666 LGA T 44 T 44 16.911 0 0.118 0.138 18.894 0.000 0.000 18.709 LGA A 45 A 45 19.857 0 0.021 0.033 22.636 0.000 0.000 - LGA F 46 F 46 17.872 0 0.294 1.176 26.599 0.000 0.000 26.599 LGA T 47 T 47 14.233 0 0.658 0.529 17.043 0.000 0.000 13.835 LGA S 48 S 48 10.867 1 0.244 0.232 13.690 0.000 0.000 13.690 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 33 132 132 100.00 245 243 99.18 33 26 SUMMARY(RMSD_GDC): 8.069 7.861 9.046 43.733 39.549 23.566 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 37 33 4.0 19 1.63 56.818 52.729 1.100 LGA_LOCAL RMSD: 1.627 Number of atoms: 19 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 12.344 Number of assigned atoms: 33 Std_ASGN_ATOMS RMSD: 8.069 Standard rmsd on all 33 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.536699 * X + -0.810941 * Y + 0.233083 * Z + 197.109283 Y_new = -0.841701 * X + 0.533898 * Y + -0.080576 * Z + 204.364426 Z_new = -0.059100 * X + -0.239432 * Y + -0.969113 * Z + 190.011917 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.138431 0.059134 -2.899380 [DEG: -122.5231 3.3881 -166.1223 ] ZXZ: 1.237959 2.892404 -2.899597 [DEG: 70.9298 165.7225 -166.1347 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T1271s8TS241_1-D1 REMARK 2: T1271s8-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1271s8TS241_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 37 33 4.0 19 1.63 52.729 8.07 REMARK ---------------------------------------------------------- MOLECULE T1271s8TS241_1-D1 PFRMAT TS TARGET T1271s8 MODEL 1 PARENT None ATOM 28276 N ARG 12 213.445 185.729 237.900 1.00 48.94 N ATOM 28277 CA ARG 12 212.466 186.786 238.164 1.00 51.17 C ATOM 28278 C ARG 12 211.345 186.774 237.136 1.00 54.45 C ATOM 28279 O ARG 12 211.486 186.194 236.056 1.00 50.47 O ATOM 28280 CB ARG 12 213.149 188.162 238.245 1.00 46.38 C ATOM 28281 CG ARG 12 214.011 188.268 239.508 1.00 42.11 C ATOM 28282 CD ARG 12 214.460 189.712 239.703 1.00 39.11 C ATOM 28283 NE ARG 12 215.215 189.877 240.948 1.00 36.90 N ATOM 28284 CZ ARG 12 215.663 191.025 241.416 1.00 33.37 C ATOM 28285 NH1 ARG 12 215.489 192.145 240.771 1.00 32.11 N ATOM 28286 NH2 ARG 12 216.302 191.072 242.546 1.00 30.07 N ATOM 28287 N ASP 13 210.272 187.432 237.505 1.00 59.09 N ATOM 28288 CA ASP 13 209.137 187.654 236.614 1.00 63.82 C ATOM 28289 C ASP 13 209.603 188.317 235.298 1.00 67.70 C ATOM 28290 O ASP 13 210.439 189.223 235.349 1.00 67.07 O ATOM 28291 CB ASP 13 208.113 188.519 237.363 1.00 61.18 C ATOM 28292 CG ASP 13 206.827 188.675 236.564 1.00 56.41 C ATOM 28293 OD1 ASP 13 206.320 187.632 236.109 1.00 49.62 O ATOM 28294 OD2 ASP 13 206.409 189.832 236.374 1.00 51.75 O ATOM 28295 N PRO 14 209.127 187.881 234.132 1.00 65.23 N ATOM 28296 CA PRO 14 209.646 188.354 232.844 1.00 67.63 C ATOM 28297 C PRO 14 209.591 189.871 232.659 1.00 70.51 C ATOM 28298 O PRO 14 210.529 190.464 232.123 1.00 69.67 O ATOM 28299 CB PRO 14 208.795 187.640 231.787 1.00 65.33 C ATOM 28300 CG PRO 14 208.384 186.348 232.470 1.00 64.06 C ATOM 28301 CD PRO 14 208.226 186.760 233.926 1.00 67.27 C ATOM 28302 N LEU 15 208.534 190.510 233.136 1.00 69.89 N ATOM 28303 CA LEU 15 208.412 191.966 233.081 1.00 72.48 C ATOM 28304 C LEU 15 209.421 192.639 234.019 1.00 74.37 C ATOM 28305 O LEU 15 210.113 193.573 233.611 1.00 73.86 O ATOM 28306 CB LEU 15 206.963 192.364 233.414 1.00 72.61 C ATOM 28307 CG LEU 15 206.690 193.872 233.267 1.00 68.72 C ATOM 28308 CD1 LEU 15 206.832 194.348 231.818 1.00 61.76 C ATOM 28309 CD2 LEU 15 205.265 194.183 233.722 1.00 64.22 C ATOM 28310 N GLN 16 209.570 192.118 235.229 1.00 71.83 N ATOM 28311 CA GLN 16 210.543 192.641 236.185 1.00 72.72 C ATOM 28312 C GLN 16 211.978 192.451 235.689 1.00 73.86 C ATOM 28313 O GLN 16 212.812 193.333 235.867 1.00 73.04 O ATOM 28314 CB GLN 16 210.330 191.980 237.557 1.00 71.63 C ATOM 28315 CG GLN 16 211.142 192.672 238.661 1.00 67.08 C ATOM 28316 CD GLN 16 210.757 194.145 238.829 1.00 61.28 C ATOM 28317 NE2 GLN 16 211.699 195.043 238.992 1.00 53.78 N ATOM 28318 OE1 GLN 16 209.597 194.502 238.793 1.00 56.66 O ATOM 28319 N ARG 17 212.255 191.353 235.024 1.00 74.02 N ATOM 28320 CA ARG 17 213.542 191.142 234.352 1.00 74.98 C ATOM 28321 C ARG 17 213.814 192.235 233.316 1.00 76.55 C ATOM 28322 O ARG 17 214.921 192.765 233.286 1.00 74.53 O ATOM 28323 CB ARG 17 213.571 189.746 233.719 1.00 72.70 C ATOM 28324 CG ARG 17 214.875 189.479 232.964 1.00 66.40 C ATOM 28325 CD ARG 17 214.874 188.086 232.345 1.00 63.53 C ATOM 28326 NE ARG 17 216.054 187.897 231.486 1.00 59.83 N ATOM 28327 CZ ARG 17 216.274 186.881 230.675 1.00 54.05 C ATOM 28328 NH1 ARG 17 215.475 185.856 230.614 1.00 50.73 N ATOM 28329 NH2 ARG 17 217.314 186.883 229.898 1.00 48.37 N ATOM 28330 N ALA 18 212.843 192.580 232.499 1.00 72.41 N ATOM 28331 CA ALA 18 212.991 193.649 231.519 1.00 72.62 C ATOM 28332 C ALA 18 213.255 195.010 232.190 1.00 73.55 C ATOM 28333 O ALA 18 214.134 195.753 231.750 1.00 75.19 O ATOM 28334 CB ALA 18 211.743 193.684 230.632 1.00 73.55 C ATOM 28335 N VAL 19 212.576 195.293 233.283 1.00 73.88 N ATOM 28336 CA VAL 19 212.794 196.497 234.097 1.00 74.36 C ATOM 28337 C VAL 19 214.212 196.528 234.677 1.00 74.96 C ATOM 28338 O VAL 19 214.914 197.531 234.542 1.00 75.21 O ATOM 28339 CB VAL 19 211.736 196.573 235.209 1.00 75.43 C ATOM 28340 CG1 VAL 19 212.057 197.632 236.261 1.00 66.68 C ATOM 28341 CG2 VAL 19 210.365 196.901 234.617 1.00 68.29 C ATOM 28342 N ASP 20 214.671 195.427 235.258 1.00 73.88 N ATOM 28343 CA ASP 20 216.020 195.328 235.816 1.00 72.81 C ATOM 28344 C ASP 20 217.096 195.519 234.732 1.00 73.01 C ATOM 28345 O ASP 20 218.099 196.199 234.950 1.00 73.12 O ATOM 28346 CB ASP 20 216.201 193.957 236.489 1.00 70.96 C ATOM 28347 CG ASP 20 215.398 193.749 237.772 1.00 66.83 C ATOM 28348 OD1 ASP 20 214.952 194.726 238.404 1.00 59.33 O ATOM 28349 OD2 ASP 20 215.289 192.574 238.198 1.00 60.97 O ATOM 28350 N VAL 21 216.874 194.973 233.554 1.00 74.14 N ATOM 28351 CA VAL 21 217.750 195.176 232.391 1.00 73.71 C ATOM 28352 C VAL 21 217.758 196.639 231.949 1.00 73.57 C ATOM 28353 O VAL 21 218.822 197.166 231.624 1.00 72.69 O ATOM 28354 CB VAL 21 217.335 194.250 231.236 1.00 73.69 C ATOM 28355 CG1 VAL 21 218.057 194.570 229.924 1.00 66.03 C ATOM 28356 CG2 VAL 21 217.644 192.797 231.587 1.00 67.47 C ATOM 28357 N ALA 22 216.621 197.303 231.966 1.00 72.29 N ATOM 28358 CA ALA 22 216.535 198.715 231.611 1.00 70.98 C ATOM 28359 C ALA 22 217.327 199.605 232.584 1.00 70.43 C ATOM 28360 O ALA 22 218.072 200.483 232.148 1.00 71.89 O ATOM 28361 CB ALA 22 215.063 199.123 231.537 1.00 72.36 C ATOM 28362 N TYR 23 217.253 199.336 233.876 1.00 73.95 N ATOM 28363 CA TYR 23 218.083 200.032 234.861 1.00 73.95 C ATOM 28364 C TYR 23 219.574 199.717 234.686 1.00 72.51 C ATOM 28365 O TYR 23 220.403 200.625 234.666 1.00 68.88 O ATOM 28366 CB TYR 23 217.622 199.677 236.275 1.00 73.89 C ATOM 28367 CG TYR 23 216.374 200.401 236.716 1.00 73.34 C ATOM 28368 CD1 TYR 23 216.382 201.805 236.845 1.00 67.75 C ATOM 28369 CD2 TYR 23 215.203 199.686 237.024 1.00 68.54 C ATOM 28370 CE1 TYR 23 215.235 202.486 237.274 1.00 66.10 C ATOM 28371 CE2 TYR 23 214.050 200.354 237.457 1.00 66.52 C ATOM 28372 CZ TYR 23 214.070 201.756 237.583 1.00 70.93 C ATOM 28373 OH TYR 23 212.949 202.421 238.007 1.00 68.33 O ATOM 28374 N ALA 24 219.919 198.457 234.517 1.00 72.36 N ATOM 28375 CA ALA 24 221.310 198.042 234.376 1.00 70.55 C ATOM 28376 C ALA 24 221.976 198.561 233.091 1.00 69.87 C ATOM 28377 O ALA 24 223.176 198.835 233.082 1.00 66.61 O ATOM 28378 CB ALA 24 221.358 196.520 234.435 1.00 68.36 C ATOM 28379 N SER 25 221.213 198.718 232.018 1.00 69.11 N ATOM 28380 CA SER 25 221.698 199.279 230.752 1.00 66.97 C ATOM 28381 C SER 25 221.783 200.805 230.745 1.00 65.36 C ATOM 28382 O SER 25 222.363 201.377 229.823 1.00 61.24 O ATOM 28383 CB SER 25 220.844 198.789 229.586 1.00 64.90 C ATOM 28384 OG SER 25 219.507 199.192 229.717 1.00 59.18 O ATOM 28385 N GLY 26 221.218 201.460 231.751 1.00 68.47 N ATOM 28386 CA GLY 26 221.169 202.917 231.840 1.00 67.89 C ATOM 28387 C GLY 26 220.091 203.562 230.960 1.00 69.22 C ATOM 28388 O GLY 26 220.143 204.769 230.731 1.00 65.45 O ATOM 28389 N MET 27 219.118 202.789 230.479 1.00 69.69 N ATOM 28390 CA MET 27 217.946 203.341 229.782 1.00 69.40 C ATOM 28391 C MET 27 217.090 204.199 230.710 1.00 68.59 C ATOM 28392 O MET 27 216.609 205.259 230.324 1.00 67.11 O ATOM 28393 CB MET 27 217.065 202.209 229.239 1.00 69.50 C ATOM 28394 CG MET 27 217.734 201.397 228.140 1.00 68.13 C ATOM 28395 SD MET 27 216.651 200.086 227.528 1.00 63.07 S ATOM 28396 CE MET 27 217.758 199.328 226.332 1.00 56.19 C ATOM 28397 N LEU 28 216.911 203.728 231.919 1.00 67.20 N ATOM 28398 CA LEU 28 216.195 204.433 232.968 1.00 67.46 C ATOM 28399 C LEU 28 217.184 204.931 234.020 1.00 66.48 C ATOM 28400 O LEU 28 218.022 204.175 234.512 1.00 64.40 O ATOM 28401 CB LEU 28 215.124 203.518 233.583 1.00 66.59 C ATOM 28402 CG LEU 28 214.052 203.021 232.598 1.00 65.13 C ATOM 28403 CD1 LEU 28 213.066 202.121 233.334 1.00 60.14 C ATOM 28404 CD2 LEU 28 213.270 204.168 231.961 1.00 62.64 C ATOM 28405 N LEU 29 217.059 206.206 234.371 1.00 62.03 N ATOM 28406 CA LEU 29 217.848 206.783 235.450 1.00 58.92 C ATOM 28407 C LEU 29 217.285 206.336 236.801 1.00 55.70 C ATOM 28408 O LEU 29 216.072 206.341 237.021 1.00 50.70 O ATOM 28409 CB LEU 29 217.876 208.315 235.321 1.00 54.64 C ATOM 28410 CG LEU 29 218.601 208.831 234.067 1.00 51.34 C ATOM 28411 CD1 LEU 29 218.426 210.343 233.964 1.00 46.79 C ATOM 28412 CD2 LEU 29 220.099 208.529 234.096 1.00 47.36 C ATOM 28413 N GLY 30 218.184 205.987 237.708 1.00 51.94 N ATOM 28414 CA GLY 30 217.831 205.635 239.076 1.00 50.22 C ATOM 28415 C GLY 30 217.229 206.804 239.862 1.00 48.81 C ATOM 28416 O GLY 30 217.332 207.971 239.472 1.00 45.19 O ATOM 28417 N SER 31 216.636 206.493 240.993 1.00 39.52 N ATOM 28418 CA SER 31 216.119 207.502 241.920 1.00 37.48 C ATOM 28419 C SER 31 217.227 208.433 242.422 1.00 36.73 C ATOM 28420 O SER 31 218.373 208.024 242.626 1.00 34.61 O ATOM 28421 CB SER 31 215.417 206.825 243.100 1.00 34.54 C ATOM 28422 OG SER 31 216.286 205.951 243.779 1.00 33.41 O ATOM 28423 N GLY 32 216.885 209.696 242.638 1.00 32.82 N ATOM 28424 CA GLY 32 217.821 210.692 243.162 1.00 31.99 C ATOM 28425 C GLY 32 218.809 211.254 242.136 1.00 32.34 C ATOM 28426 O GLY 32 219.697 212.012 242.521 1.00 30.58 O ATOM 28427 N SER 33 218.656 210.952 240.859 1.00 33.40 N ATOM 28428 CA SER 33 219.436 211.591 239.788 1.00 32.51 C ATOM 28429 C SER 33 219.297 213.120 239.792 1.00 32.69 C ATOM 28430 O SER 33 220.285 213.828 239.605 1.00 31.43 O ATOM 28431 CB SER 33 219.015 211.034 238.424 1.00 30.01 C ATOM 28432 OG SER 33 217.645 211.255 238.181 1.00 28.65 O ATOM 28433 N SER 34 218.119 213.625 240.109 1.00 29.94 N ATOM 28434 CA SER 34 217.861 215.065 240.281 1.00 29.85 C ATOM 28435 C SER 34 218.649 215.703 241.432 1.00 29.98 C ATOM 28436 O SER 34 218.939 216.897 241.395 1.00 28.60 O ATOM 28437 CB SER 34 216.367 215.282 240.530 1.00 27.22 C ATOM 28438 OG SER 34 215.953 214.583 241.683 1.00 25.90 O ATOM 28439 N ARG 35 219.049 214.919 242.438 1.00 29.69 N ATOM 28440 CA ARG 35 219.818 215.363 243.614 1.00 30.37 C ATOM 28441 C ARG 35 221.334 215.269 243.423 1.00 29.96 C ATOM 28442 O ARG 35 222.078 215.474 244.376 1.00 29.02 O ATOM 28443 CB ARG 35 219.377 214.587 244.860 1.00 28.43 C ATOM 28444 CG ARG 35 217.887 214.747 245.150 1.00 26.17 C ATOM 28445 CD ARG 35 217.525 214.060 246.457 1.00 24.60 C ATOM 28446 NE ARG 35 216.085 214.164 246.701 1.00 23.10 N ATOM 28447 CZ ARG 35 215.427 213.639 247.715 1.00 22.24 C ATOM 28448 NH1 ARG 35 216.032 213.000 248.677 1.00 21.68 N ATOM 28449 NH2 ARG 35 214.140 213.750 247.764 1.00 20.26 N ATOM 28450 N GLY 36 221.788 214.924 242.230 1.00 30.16 N ATOM 28451 CA GLY 36 223.216 214.766 241.947 1.00 29.84 C ATOM 28452 C GLY 36 223.834 213.471 242.483 1.00 30.18 C ATOM 28453 O GLY 36 225.052 213.349 242.530 1.00 28.81 O ATOM 28454 N THR 37 223.028 212.501 242.894 1.00 30.14 N ATOM 28455 CA THR 37 223.531 211.202 243.387 1.00 30.39 C ATOM 28456 C THR 37 224.155 210.347 242.283 1.00 30.57 C ATOM 28457 O THR 37 225.045 209.544 242.549 1.00 29.09 O ATOM 28458 CB THR 37 222.416 210.387 244.046 1.00 27.62 C ATOM 28459 CG2 THR 37 221.879 211.056 245.309 1.00 26.12 C ATOM 28460 OG1 THR 37 221.326 210.219 243.162 1.00 26.00 O ATOM 28461 N THR 38 223.714 210.515 241.056 1.00 31.67 N ATOM 28462 CA THR 38 224.286 209.861 239.879 1.00 32.48 C ATOM 28463 C THR 38 225.186 210.839 239.138 1.00 32.45 C ATOM 28464 O THR 38 224.724 211.861 238.630 1.00 30.71 O ATOM 28465 CB THR 38 223.208 209.317 238.939 1.00 29.71 C ATOM 28466 CG2 THR 38 222.456 208.150 239.574 1.00 27.08 C ATOM 28467 OG1 THR 38 222.263 210.307 238.622 1.00 27.71 O ATOM 28468 N HIS 39 226.452 210.496 239.059 1.00 33.03 N ATOM 28469 CA HIS 39 227.437 211.296 238.342 1.00 33.66 C ATOM 28470 C HIS 39 227.296 211.102 236.823 1.00 33.30 C ATOM 28471 O HIS 39 227.320 209.979 236.326 1.00 31.01 O ATOM 28472 CB HIS 39 228.830 210.910 238.848 1.00 30.69 C ATOM 28473 CG HIS 39 229.932 211.622 238.137 1.00 28.32 C ATOM 28474 CD2 HIS 39 230.498 212.817 238.475 1.00 25.35 C ATOM 28475 ND1 HIS 39 230.566 211.177 237.006 1.00 26.28 N ATOM 28476 CE1 HIS 39 231.491 212.082 236.671 1.00 24.48 C ATOM 28477 NE2 HIS 39 231.483 213.091 237.542 1.00 24.55 N ATOM 28478 N PHE 40 227.181 212.188 236.108 1.00 31.28 N ATOM 28479 CA PHE 40 227.136 212.193 234.655 1.00 31.78 C ATOM 28480 C PHE 40 228.278 213.051 234.107 1.00 32.06 C ATOM 28481 O PHE 40 228.233 214.277 234.160 1.00 30.64 O ATOM 28482 CB PHE 40 225.763 212.677 234.193 1.00 29.22 C ATOM 28483 CG PHE 40 225.532 212.470 232.718 1.00 27.44 C ATOM 28484 CD1 PHE 40 225.772 213.511 231.812 1.00 25.50 C ATOM 28485 CD2 PHE 40 225.077 211.229 232.246 1.00 24.78 C ATOM 28486 CE1 PHE 40 225.544 213.312 230.448 1.00 23.62 C ATOM 28487 CE2 PHE 40 224.849 211.030 230.886 1.00 23.52 C ATOM 28488 CZ PHE 40 225.076 212.074 229.984 1.00 22.81 C ATOM 28489 N SER 41 229.314 212.400 233.620 1.00 31.37 N ATOM 28490 CA SER 41 230.512 213.073 233.122 1.00 31.77 C ATOM 28491 C SER 41 230.500 213.220 231.603 1.00 31.98 C ATOM 28492 O SER 41 229.821 212.487 230.880 1.00 31.00 O ATOM 28493 CB SER 41 231.773 212.346 233.594 1.00 29.93 C ATOM 28494 OG SER 41 231.911 211.090 232.971 1.00 27.93 O ATOM 28495 N GLU 42 231.302 214.127 231.102 1.00 29.92 N ATOM 28496 CA GLU 42 231.468 214.342 229.666 1.00 30.28 C ATOM 28497 C GLU 42 232.013 213.092 228.951 1.00 30.58 C ATOM 28498 O GLU 42 231.631 212.786 227.828 1.00 29.38 O ATOM 28499 CB GLU 42 232.396 215.556 229.480 1.00 28.34 C ATOM 28500 CG GLU 42 232.435 216.043 228.036 1.00 25.73 C ATOM 28501 CD GLU 42 233.271 217.311 227.839 1.00 23.71 C ATOM 28502 OE1 GLU 42 233.445 217.713 226.673 1.00 22.45 O ATOM 28503 OE2 GLU 42 233.745 217.927 228.813 1.00 23.35 O ATOM 28504 N THR 43 232.850 212.320 229.618 1.00 30.29 N ATOM 28505 CA THR 43 233.417 211.083 229.065 1.00 30.65 C ATOM 28506 C THR 43 232.373 209.986 228.872 1.00 30.63 C ATOM 28507 O THR 43 232.501 209.179 227.955 1.00 29.36 O ATOM 28508 CB THR 43 234.535 210.536 229.958 1.00 28.64 C ATOM 28509 CG2 THR 43 235.741 211.471 229.996 1.00 26.90 C ATOM 28510 OG1 THR 43 234.094 210.373 231.287 1.00 26.81 O ATOM 28511 N THR 44 231.348 209.938 229.703 1.00 33.06 N ATOM 28512 CA THR 44 230.263 208.958 229.576 1.00 33.82 C ATOM 28513 C THR 44 229.168 209.405 228.608 1.00 33.80 C ATOM 28514 O THR 44 228.380 208.575 228.172 1.00 32.63 O ATOM 28515 CB THR 44 229.638 208.617 230.934 1.00 32.36 C ATOM 28516 CG2 THR 44 230.633 207.899 231.842 1.00 29.85 C ATOM 28517 OG1 THR 44 229.208 209.766 231.614 1.00 30.63 O ATOM 28518 N ALA 45 229.132 210.677 228.260 1.00 32.54 N ATOM 28519 CA ALA 45 228.088 211.226 227.402 1.00 32.60 C ATOM 28520 C ALA 45 228.173 210.724 225.950 1.00 33.38 C ATOM 28521 O ALA 45 227.149 210.384 225.356 1.00 32.12 O ATOM 28522 CB ALA 45 228.161 212.752 227.463 1.00 30.88 C ATOM 28523 N PHE 46 229.364 210.660 225.388 1.00 30.29 N ATOM 28524 CA PHE 46 229.549 210.326 223.968 1.00 30.61 C ATOM 28525 C PHE 46 230.829 209.535 223.675 1.00 30.73 C ATOM 28526 O PHE 46 231.398 209.639 222.593 1.00 29.28 O ATOM 28527 CB PHE 46 229.463 211.605 223.126 1.00 29.44 C ATOM 28528 CG PHE 46 230.504 212.641 223.465 1.00 28.84 C ATOM 28529 CD1 PHE 46 230.207 213.658 224.386 1.00 26.63 C ATOM 28530 CD2 PHE 46 231.783 212.583 222.895 1.00 27.23 C ATOM 28531 CE1 PHE 46 231.183 214.589 224.737 1.00 26.01 C ATOM 28532 CE2 PHE 46 232.761 213.513 223.251 1.00 26.76 C ATOM 28533 CZ PHE 46 232.459 214.514 224.176 1.00 26.22 C ATOM 28534 N THR 47 231.291 208.741 224.602 1.00 30.85 N ATOM 28535 CA THR 47 232.430 207.848 224.350 1.00 30.91 C ATOM 28536 C THR 47 231.966 206.417 224.132 1.00 30.46 C ATOM 28537 O THR 47 231.122 205.901 224.857 1.00 29.26 O ATOM 28538 CB THR 47 233.501 207.906 225.440 1.00 29.71 C ATOM 28539 CG2 THR 47 234.203 209.253 225.471 1.00 27.85 C ATOM 28540 OG1 THR 47 232.957 207.662 226.710 1.00 28.39 O ATOM 28541 N SER 48 232.545 205.753 223.152 1.00 31.75 N ATOM 28542 CA SER 48 232.253 204.352 222.833 1.00 31.85 C ATOM 28543 C SER 48 233.065 203.347 223.664 1.00 32.23 C ATOM 28544 O SER 48 232.969 202.145 223.442 1.00 31.13 O ATOM 28545 CB SER 48 232.444 204.116 221.330 1.00 29.44 C ATOM 28546 OG SER 48 233.713 204.548 220.907 1.00 27.60 O TER END