####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2019 # # # # Adam Zemla (zemla1@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 37 ( 271), selected 33 , name T1271s8TS481_1-D1 # Molecule2: number of CA atoms 33 ( 245), selected 33 , name T1271s8-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1271s8TS481_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 33 12 - 48 2.44 2.44 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 31 14 - 48 1.87 2.65 LCS_AVERAGE: 92.01 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 14 - 31 0.86 2.78 LCS_AVERAGE: 40.40 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 33 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT R 12 R 12 3 18 33 3 3 3 7 10 15 18 21 25 29 30 33 33 33 33 33 33 33 33 33 LCS_GDT D 13 D 13 3 23 33 3 9 11 11 15 23 28 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT P 14 P 14 18 31 33 3 7 21 25 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT L 15 L 15 18 31 33 14 17 21 25 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT Q 16 Q 16 18 31 33 14 17 21 25 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT R 17 R 17 18 31 33 14 17 21 25 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT A 18 A 18 18 31 33 14 17 21 25 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT V 19 V 19 18 31 33 14 17 21 25 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT D 20 D 20 18 31 33 14 17 21 25 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT V 21 V 21 18 31 33 14 17 21 25 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT A 22 A 22 18 31 33 14 17 21 25 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT Y 23 Y 23 18 31 33 14 17 21 25 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT A 24 A 24 18 31 33 14 17 21 25 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT S 25 S 25 18 31 33 14 17 21 25 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT G 26 G 26 18 31 33 14 17 21 25 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT M 27 M 27 18 31 33 14 17 21 25 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT L 28 L 28 18 31 33 14 17 21 25 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT L 29 L 29 18 31 33 13 17 21 25 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT G 30 G 30 18 31 33 3 3 6 23 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT S 31 S 31 18 31 33 3 10 21 25 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT G 32 G 32 4 31 33 3 3 17 22 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT S 33 S 33 3 31 33 3 3 20 25 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT T 38 T 38 3 31 33 0 3 3 3 6 9 19 30 30 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT H 39 H 39 10 31 33 6 9 16 25 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT F 40 F 40 10 31 33 6 9 11 11 13 14 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT S 41 S 41 10 31 33 6 9 11 11 23 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT E 42 E 42 10 31 33 6 17 20 25 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT T 43 T 43 10 31 33 6 11 21 25 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT T 44 T 44 10 31 33 6 10 20 25 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT A 45 A 45 10 31 33 7 17 21 25 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT F 46 F 46 10 31 33 3 11 21 25 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT T 47 T 47 10 31 33 3 17 21 25 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_GDT S 48 S 48 10 31 33 3 17 21 25 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 LCS_AVERAGE LCS_A: 77.47 ( 40.40 92.01 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 14 17 21 25 27 29 29 31 31 32 32 33 33 33 33 33 33 33 33 33 GDT PERCENT_AT 42.42 51.52 63.64 75.76 81.82 87.88 87.88 93.94 93.94 96.97 96.97 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.26 0.45 0.77 1.07 1.22 1.47 1.47 1.87 1.87 2.08 2.08 2.44 2.44 2.44 2.44 2.44 2.44 2.44 2.44 2.44 GDT RMS_ALL_AT 2.67 2.74 2.66 2.61 2.65 2.62 2.62 2.51 2.51 2.52 2.52 2.44 2.44 2.44 2.44 2.44 2.44 2.44 2.44 2.44 # Checking swapping # possible swapping detected: F 46 F 46 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA R 12 R 12 8.260 0 0.539 1.035 19.805 0.000 0.000 17.452 LGA D 13 D 13 5.023 0 0.334 0.412 11.162 5.909 2.955 11.162 LGA P 14 P 14 2.277 0 0.636 0.607 4.592 55.455 37.662 4.592 LGA L 15 L 15 0.884 0 0.062 0.053 1.332 77.727 80.000 0.453 LGA Q 16 Q 16 0.651 0 0.000 0.257 2.113 86.364 70.303 1.697 LGA R 17 R 17 0.313 0 0.000 0.667 1.583 100.000 84.793 1.555 LGA A 18 A 18 0.133 0 0.011 0.000 0.218 100.000 100.000 - LGA V 19 V 19 0.393 0 0.037 0.044 0.622 100.000 92.208 0.567 LGA D 20 D 20 0.512 0 0.000 0.815 3.625 90.909 62.727 3.133 LGA V 21 V 21 0.375 0 0.025 0.054 0.448 100.000 100.000 0.448 LGA A 22 A 22 0.193 0 0.000 0.015 0.313 100.000 100.000 - LGA Y 23 Y 23 0.396 0 0.027 0.288 2.230 100.000 75.152 2.230 LGA A 24 A 24 0.407 0 0.000 0.011 0.498 100.000 100.000 - LGA S 25 S 25 0.310 0 0.065 0.563 2.149 100.000 89.697 2.149 LGA G 26 G 26 0.399 0 0.017 0.017 0.711 90.909 90.909 - LGA M 27 M 27 0.856 0 0.022 0.408 1.762 77.727 75.909 1.762 LGA L 28 L 28 1.062 0 0.054 0.060 1.897 77.727 66.136 1.897 LGA L 29 L 29 0.548 0 0.204 0.222 1.554 73.636 69.773 1.554 LGA G 30 G 30 2.937 0 0.121 0.121 2.937 49.545 49.545 - LGA S 31 S 31 2.350 0 0.337 0.787 5.551 44.545 31.515 5.551 LGA G 32 G 32 2.440 0 0.609 0.609 2.440 55.000 55.000 - LGA S 33 S 33 1.828 1 0.391 0.437 3.772 32.727 26.753 3.290 LGA T 38 T 38 5.564 0 0.033 0.178 9.352 11.364 6.494 5.764 LGA H 39 H 39 1.897 0 0.586 1.002 8.345 44.545 18.364 8.191 LGA F 40 F 40 4.038 0 0.014 1.327 8.473 15.455 5.620 8.473 LGA S 41 S 41 3.386 0 0.000 0.092 4.491 28.182 20.606 4.005 LGA E 42 E 42 1.359 0 0.000 1.122 5.682 62.273 38.384 5.682 LGA T 43 T 43 1.845 0 0.086 0.215 3.309 58.636 42.597 3.309 LGA T 44 T 44 1.147 0 0.000 0.145 2.261 82.727 69.351 1.479 LGA A 45 A 45 0.809 0 0.016 0.026 1.319 78.182 75.636 - LGA F 46 F 46 1.693 0 0.000 0.362 2.387 51.364 53.719 1.540 LGA T 47 T 47 2.004 0 0.102 0.143 2.804 38.636 36.883 2.524 LGA S 48 S 48 2.116 1 0.623 0.613 3.044 33.636 33.766 1.823 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 33 132 132 100.00 245 243 99.18 33 26 SUMMARY(RMSD_GDC): 2.443 2.228 3.858 64.339 56.438 33.427 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 37 33 4.0 31 1.87 80.303 86.267 1.573 LGA_LOCAL RMSD: 1.870 Number of atoms: 31 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.509 Number of assigned atoms: 33 Std_ASGN_ATOMS RMSD: 2.443 Standard rmsd on all 33 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.693086 * X + -0.265816 * Y + 0.670055 * Z + 174.159683 Y_new = 0.720724 * X + 0.237859 * Y + -0.651137 * Z + 126.109451 Z_new = 0.013704 * X + 0.934219 * Y + 0.356437 * Z + 173.066498 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.804944 -0.013705 1.206309 [DEG: 46.1199 -0.7852 69.1164 ] ZXZ: 0.799716 1.206345 0.014668 [DEG: 45.8203 69.1185 0.8404 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T1271s8TS481_1-D1 REMARK 2: T1271s8-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T1271s8TS481_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 37 33 4.0 31 1.87 86.267 2.44 REMARK ---------------------------------------------------------- MOLECULE T1271s8TS481_1-D1 PFRMAT TS TARGET T1271s8 MODEL 1 PARENT N/A ATOM 28784 N ARG 12 209.056 184.249 237.643 1.00 0.00 N ATOM 28785 CA ARG 12 207.917 184.904 238.282 1.00 0.00 C ATOM 28786 C ARG 12 207.441 186.118 237.492 1.00 0.00 C ATOM 28787 O ARG 12 206.308 186.123 237.025 1.00 0.00 O ATOM 28788 CB ARG 12 208.270 185.240 239.736 1.00 0.00 C ATOM 28789 CG ARG 12 207.034 185.686 240.518 1.00 0.00 C ATOM 28790 CD ARG 12 207.403 185.973 241.969 1.00 0.00 C ATOM 28791 NE ARG 12 206.227 186.407 242.723 1.00 0.00 N ATOM 28792 CZ ARG 12 206.193 186.683 244.016 1.00 0.00 C ATOM 28793 NH1 ARG 12 207.259 186.586 244.761 1.00 0.00 N ATOM 28794 NH2 ARG 12 205.079 187.065 244.567 1.00 0.00 N ATOM 28795 N ASP 13 208.306 187.099 237.307 1.00 0.00 N ATOM 28796 CA ASP 13 207.962 188.352 236.635 1.00 0.00 C ATOM 28797 C ASP 13 209.016 188.718 235.585 1.00 0.00 C ATOM 28798 O ASP 13 209.909 189.532 235.832 1.00 0.00 O ATOM 28799 CB ASP 13 207.779 189.470 237.675 1.00 0.00 C ATOM 28800 CG ASP 13 206.556 189.257 238.555 1.00 0.00 C ATOM 28801 OD1 ASP 13 205.483 188.955 238.002 1.00 0.00 O ATOM 28802 OD2 ASP 13 206.701 189.408 239.785 1.00 0.00 O ATOM 28803 N PRO 14 208.943 188.144 234.394 1.00 0.00 N ATOM 28804 CA PRO 14 209.931 188.414 233.349 1.00 0.00 C ATOM 28805 C PRO 14 209.905 189.862 232.860 1.00 0.00 C ATOM 28806 O PRO 14 210.947 190.408 232.510 1.00 0.00 O ATOM 28807 CB PRO 14 209.589 187.427 232.225 1.00 0.00 C ATOM 28808 CG PRO 14 208.119 187.129 232.428 1.00 0.00 C ATOM 28809 CD PRO 14 207.959 187.178 233.937 1.00 0.00 C ATOM 28810 N LEU 15 208.750 190.511 232.883 1.00 0.00 N ATOM 28811 CA LEU 15 208.643 191.923 232.544 1.00 0.00 C ATOM 28812 C LEU 15 209.368 192.793 233.572 1.00 0.00 C ATOM 28813 O LEU 15 210.095 193.709 233.192 1.00 0.00 O ATOM 28814 CB LEU 15 207.159 192.307 232.425 1.00 0.00 C ATOM 28815 CG LEU 15 206.931 193.768 232.002 1.00 0.00 C ATOM 28816 CD1 LEU 15 207.465 194.052 230.598 1.00 0.00 C ATOM 28817 CD2 LEU 15 205.438 194.075 232.018 1.00 0.00 C ATOM 28818 N GLN 16 209.220 192.487 234.840 1.00 0.00 N ATOM 28819 CA GLN 16 209.917 193.221 235.891 1.00 0.00 C ATOM 28820 C GLN 16 211.430 193.032 235.791 1.00 0.00 C ATOM 28821 O GLN 16 212.179 193.989 235.949 1.00 0.00 O ATOM 28822 CB GLN 16 209.387 192.795 237.269 1.00 0.00 C ATOM 28823 CG GLN 16 209.921 193.680 238.395 1.00 0.00 C ATOM 28824 CD GLN 16 209.553 195.151 238.209 1.00 0.00 C ATOM 28825 NE2 GLN 16 210.468 196.064 238.426 1.00 0.00 N ATOM 28826 OE1 GLN 16 208.437 195.488 237.853 1.00 0.00 O ATOM 28827 N ARG 17 211.873 191.841 235.445 1.00 0.00 N ATOM 28828 CA ARG 17 213.288 191.594 235.154 1.00 0.00 C ATOM 28829 C ARG 17 213.774 192.475 234.001 1.00 0.00 C ATOM 28830 O ARG 17 214.838 193.070 234.108 1.00 0.00 O ATOM 28831 CB ARG 17 213.498 190.104 234.845 1.00 0.00 C ATOM 28832 CG ARG 17 214.942 189.782 234.447 1.00 0.00 C ATOM 28833 CD ARG 17 215.117 188.301 234.138 1.00 0.00 C ATOM 28834 NE ARG 17 216.433 188.027 233.549 1.00 0.00 N ATOM 28835 CZ ARG 17 216.730 188.010 232.251 1.00 0.00 C ATOM 28836 NH1 ARG 17 215.842 188.232 231.327 1.00 0.00 N ATOM 28837 NH2 ARG 17 217.942 187.762 231.867 1.00 0.00 N ATOM 28838 N ALA 18 213.013 192.595 232.933 1.00 0.00 N ATOM 28839 CA ALA 18 213.364 193.461 231.813 1.00 0.00 C ATOM 28840 C ALA 18 213.445 194.937 232.230 1.00 0.00 C ATOM 28841 O ALA 18 214.361 195.646 231.814 1.00 0.00 O ATOM 28842 CB ALA 18 212.350 193.252 230.688 1.00 0.00 C ATOM 28843 N VAL 19 212.548 195.377 233.078 1.00 0.00 N ATOM 28844 CA VAL 19 212.581 196.723 233.660 1.00 0.00 C ATOM 28845 C VAL 19 213.841 196.927 234.503 1.00 0.00 C ATOM 28846 O VAL 19 214.527 197.937 234.344 1.00 0.00 O ATOM 28847 CB VAL 19 211.306 196.972 234.482 1.00 0.00 C ATOM 28848 CG1 VAL 19 211.396 198.228 235.337 1.00 0.00 C ATOM 28849 CG2 VAL 19 210.103 197.117 233.556 1.00 0.00 C ATOM 28850 N ASP 20 214.195 195.970 235.332 1.00 0.00 N ATOM 28851 CA ASP 20 215.414 196.040 236.138 1.00 0.00 C ATOM 28852 C ASP 20 216.670 196.094 235.261 1.00 0.00 C ATOM 28853 O ASP 20 217.586 196.873 235.527 1.00 0.00 O ATOM 28854 CB ASP 20 215.502 194.828 237.070 1.00 0.00 C ATOM 28855 CG ASP 20 214.422 194.769 238.137 1.00 0.00 C ATOM 28856 OD1 ASP 20 213.798 195.799 238.459 1.00 0.00 O ATOM 28857 OD2 ASP 20 214.233 193.660 238.684 1.00 0.00 O ATOM 28858 N VAL 21 216.693 195.319 234.191 1.00 0.00 N ATOM 28859 CA VAL 21 217.766 195.357 233.193 1.00 0.00 C ATOM 28860 C VAL 21 217.839 196.730 232.522 1.00 0.00 C ATOM 28861 O VAL 21 218.933 197.258 232.333 1.00 0.00 O ATOM 28862 CB VAL 21 217.573 194.239 232.155 1.00 0.00 C ATOM 28863 CG1 VAL 21 218.477 194.399 230.937 1.00 0.00 C ATOM 28864 CG2 VAL 21 217.865 192.878 232.784 1.00 0.00 C ATOM 28865 N ALA 22 216.706 197.325 232.201 1.00 0.00 N ATOM 28866 CA ALA 22 216.669 198.652 231.604 1.00 0.00 C ATOM 28867 C ALA 22 217.227 199.729 232.546 1.00 0.00 C ATOM 28868 O ALA 22 217.973 200.603 232.107 1.00 0.00 O ATOM 28869 CB ALA 22 215.237 198.973 231.179 1.00 0.00 C ATOM 28870 N TYR 23 216.926 199.649 233.827 1.00 0.00 N ATOM 28871 CA TYR 23 217.526 200.539 234.819 1.00 0.00 C ATOM 28872 C TYR 23 219.025 200.276 235.007 1.00 0.00 C ATOM 28873 O TYR 23 219.813 201.220 235.021 1.00 0.00 O ATOM 28874 CB TYR 23 216.787 200.412 236.153 1.00 0.00 C ATOM 28875 CG TYR 23 215.447 201.101 236.187 1.00 0.00 C ATOM 28876 CD1 TYR 23 215.357 202.486 235.960 1.00 0.00 C ATOM 28877 CD2 TYR 23 214.278 200.378 236.476 1.00 0.00 C ATOM 28878 CE1 TYR 23 214.124 203.140 236.011 1.00 0.00 C ATOM 28879 CE2 TYR 23 213.039 201.024 236.536 1.00 0.00 C ATOM 28880 CZ TYR 23 212.965 202.407 236.302 1.00 0.00 C ATOM 28881 OH TYR 23 211.756 203.051 236.359 1.00 0.00 O ATOM 28882 N ALA 24 219.422 199.031 235.095 1.00 0.00 N ATOM 28883 CA ALA 24 220.823 198.666 235.274 1.00 0.00 C ATOM 28884 C ALA 24 221.699 199.079 234.081 1.00 0.00 C ATOM 28885 O ALA 24 222.827 199.531 234.265 1.00 0.00 O ATOM 28886 CB ALA 24 220.912 197.160 235.517 1.00 0.00 C ATOM 28887 N SER 25 221.174 198.977 232.867 1.00 0.00 N ATOM 28888 CA SER 25 221.874 199.384 231.645 1.00 0.00 C ATOM 28889 C SER 25 221.861 200.893 231.394 1.00 0.00 C ATOM 28890 O SER 25 222.532 201.368 230.478 1.00 0.00 O ATOM 28891 CB SER 25 221.301 198.646 230.440 1.00 0.00 C ATOM 28892 OG SER 25 219.940 198.950 230.257 1.00 0.00 O ATOM 28893 N GLY 26 221.114 201.646 232.181 1.00 0.00 N ATOM 28894 CA GLY 26 220.984 203.090 232.024 1.00 0.00 C ATOM 28895 C GLY 26 220.074 203.519 230.870 1.00 0.00 C ATOM 28896 O GLY 26 220.113 204.680 230.466 1.00 0.00 O ATOM 28897 N MET 27 219.264 202.620 230.338 1.00 0.00 N ATOM 28898 CA MET 27 218.245 202.975 229.338 1.00 0.00 C ATOM 28899 C MET 27 217.172 203.883 229.929 1.00 0.00 C ATOM 28900 O MET 27 216.737 204.840 229.294 1.00 0.00 O ATOM 28901 CB MET 27 217.564 201.715 228.797 1.00 0.00 C ATOM 28902 CG MET 27 218.498 200.827 227.994 1.00 0.00 C ATOM 28903 SD MET 27 217.637 199.379 227.346 1.00 0.00 S ATOM 28904 CE MET 27 219.008 198.583 226.513 1.00 0.00 C ATOM 28905 N LEU 28 216.764 203.569 231.114 1.00 0.00 N ATOM 28906 CA LEU 28 215.819 204.369 231.870 1.00 0.00 C ATOM 28907 C LEU 28 216.548 205.105 232.989 1.00 0.00 C ATOM 28908 O LEU 28 217.314 204.514 233.746 1.00 0.00 O ATOM 28909 CB LEU 28 214.689 203.487 232.411 1.00 0.00 C ATOM 28910 CG LEU 28 213.849 202.783 231.334 1.00 0.00 C ATOM 28911 CD1 LEU 28 212.765 201.949 232.005 1.00 0.00 C ATOM 28912 CD2 LEU 28 213.176 203.773 230.381 1.00 0.00 C ATOM 28913 N LEU 29 216.278 206.391 233.082 1.00 0.00 N ATOM 28914 CA LEU 29 216.827 207.232 234.132 1.00 0.00 C ATOM 28915 C LEU 29 215.951 207.091 235.377 1.00 0.00 C ATOM 28916 O LEU 29 214.943 207.787 235.521 1.00 0.00 O ATOM 28917 CB LEU 29 216.922 208.679 233.630 1.00 0.00 C ATOM 28918 CG LEU 29 217.766 208.875 232.362 1.00 0.00 C ATOM 28919 CD1 LEU 29 217.727 210.340 231.940 1.00 0.00 C ATOM 28920 CD2 LEU 29 219.222 208.470 232.562 1.00 0.00 C ATOM 28921 N GLY 30 216.319 206.174 236.229 1.00 0.00 N ATOM 28922 CA GLY 30 215.599 205.920 237.470 1.00 0.00 C ATOM 28923 C GLY 30 216.541 205.913 238.662 1.00 0.00 C ATOM 28924 O GLY 30 217.654 205.406 238.577 1.00 0.00 O ATOM 28925 N SER 31 216.074 206.445 239.764 1.00 0.00 N ATOM 28926 CA SER 31 216.826 206.514 241.020 1.00 0.00 C ATOM 28927 C SER 31 216.938 205.144 241.698 1.00 0.00 C ATOM 28928 O SER 31 216.353 204.922 242.755 1.00 0.00 O ATOM 28929 CB SER 31 216.170 207.549 241.936 1.00 0.00 C ATOM 28930 OG SER 31 214.814 207.226 242.135 1.00 0.00 O ATOM 28931 N GLY 32 217.634 204.212 241.078 1.00 0.00 N ATOM 28932 CA GLY 32 218.009 202.933 241.691 1.00 0.00 C ATOM 28933 C GLY 32 216.856 202.031 242.143 1.00 0.00 C ATOM 28934 O GLY 32 217.069 201.162 242.982 1.00 0.00 O ATOM 28935 N SER 33 215.652 202.226 241.637 1.00 0.00 N ATOM 28936 CA SER 33 214.502 201.411 242.029 1.00 0.00 C ATOM 28937 C SER 33 214.476 200.079 241.277 1.00 0.00 C ATOM 28938 O SER 33 213.615 199.845 240.427 1.00 0.00 O ATOM 28939 CB SER 33 213.199 202.203 241.882 1.00 0.00 C ATOM 28940 OG SER 33 212.933 202.511 240.533 1.00 0.00 O ATOM 28941 N SER 34 215.411 199.210 241.578 1.00 0.00 N ATOM 28942 CA SER 34 215.326 197.819 241.135 1.00 0.00 C ATOM 28943 C SER 34 214.314 197.085 242.014 1.00 0.00 C ATOM 28944 O SER 34 214.631 196.677 243.131 1.00 0.00 O ATOM 28945 CB SER 34 216.704 197.155 241.169 1.00 0.00 C ATOM 28946 OG SER 34 217.251 197.171 242.464 1.00 0.00 O ATOM 28947 N ARG 35 213.100 196.954 241.537 1.00 0.00 N ATOM 28948 CA ARG 35 212.021 196.322 242.308 1.00 0.00 C ATOM 28949 C ARG 35 212.101 194.800 242.286 1.00 0.00 C ATOM 28950 O ARG 35 211.771 194.155 243.275 1.00 0.00 O ATOM 28951 CB ARG 35 210.659 196.779 241.769 1.00 0.00 C ATOM 28952 CG ARG 35 210.390 198.268 242.010 1.00 0.00 C ATOM 28953 CD ARG 35 209.006 198.630 241.468 1.00 0.00 C ATOM 28954 NE ARG 35 208.687 200.045 241.695 1.00 0.00 N ATOM 28955 CZ ARG 35 207.631 200.680 241.204 1.00 0.00 C ATOM 28956 NH1 ARG 35 206.741 200.065 240.469 1.00 0.00 N ATOM 28957 NH2 ARG 35 207.458 201.946 241.437 1.00 0.00 N ATOM 28958 N GLY 36 212.512 194.267 241.165 1.00 0.00 N ATOM 28959 CA GLY 36 212.641 192.829 240.984 1.00 0.00 C ATOM 28960 C GLY 36 213.988 192.283 241.457 1.00 0.00 C ATOM 28961 O GLY 36 214.865 193.005 241.930 1.00 0.00 O ATOM 28962 N THR 37 214.138 190.994 241.320 1.00 0.00 N ATOM 28963 CA THR 37 215.382 190.296 241.651 1.00 0.00 C ATOM 28964 C THR 37 216.226 190.120 240.396 1.00 0.00 C ATOM 28965 O THR 37 215.801 189.458 239.448 1.00 0.00 O ATOM 28966 CB THR 37 215.103 188.935 242.297 1.00 0.00 C ATOM 28967 CG2 THR 37 214.487 189.094 243.683 1.00 0.00 C ATOM 28968 OG1 THR 37 214.200 188.184 241.511 1.00 0.00 O ATOM 28969 N THR 38 217.419 190.672 240.407 1.00 0.00 N ATOM 28970 CA THR 38 218.396 190.488 239.333 1.00 0.00 C ATOM 28971 C THR 38 219.503 189.540 239.781 1.00 0.00 C ATOM 28972 O THR 38 219.900 189.526 240.949 1.00 0.00 O ATOM 28973 CB THR 38 218.988 191.823 238.864 1.00 0.00 C ATOM 28974 CG2 THR 38 217.938 192.662 238.145 1.00 0.00 C ATOM 28975 OG1 THR 38 219.454 192.580 239.958 1.00 0.00 O ATOM 28976 N HIS 39 219.985 188.746 238.857 1.00 0.00 N ATOM 28977 CA HIS 39 221.117 187.867 239.136 1.00 0.00 C ATOM 28978 C HIS 39 222.424 188.677 239.172 1.00 0.00 C ATOM 28979 O HIS 39 222.590 189.624 238.408 1.00 0.00 O ATOM 28980 CB HIS 39 221.162 186.752 238.082 1.00 0.00 C ATOM 28981 CG HIS 39 222.109 185.654 238.431 1.00 0.00 C ATOM 28982 CD2 HIS 39 221.845 184.533 239.172 1.00 0.00 C ATOM 28983 ND1 HIS 39 223.435 185.591 238.100 1.00 0.00 N ATOM 28984 CE1 HIS 39 223.957 184.479 238.625 1.00 0.00 C ATOM 28985 NE2 HIS 39 223.019 183.804 239.285 1.00 0.00 N ATOM 28986 N PHE 40 223.370 188.292 240.006 1.00 0.00 N ATOM 28987 CA PHE 40 224.638 189.019 240.129 1.00 0.00 C ATOM 28988 C PHE 40 225.403 189.113 238.809 1.00 0.00 C ATOM 28989 O PHE 40 225.955 190.163 238.492 1.00 0.00 O ATOM 28990 CB PHE 40 225.514 188.355 241.191 1.00 0.00 C ATOM 28991 CG PHE 40 225.014 188.541 242.600 1.00 0.00 C ATOM 28992 CD1 PHE 40 225.135 189.791 243.222 1.00 0.00 C ATOM 28993 CD2 PHE 40 224.432 187.479 243.300 1.00 0.00 C ATOM 28994 CE1 PHE 40 224.675 189.977 244.528 1.00 0.00 C ATOM 28995 CE2 PHE 40 223.969 187.660 244.605 1.00 0.00 C ATOM 28996 CZ PHE 40 224.090 188.910 245.222 1.00 0.00 C ATOM 28997 N SER 41 225.405 188.052 238.025 1.00 0.00 N ATOM 28998 CA SER 41 226.043 188.065 236.708 1.00 0.00 C ATOM 28999 C SER 41 225.342 189.015 235.738 1.00 0.00 C ATOM 29000 O SER 41 226.008 189.723 234.989 1.00 0.00 O ATOM 29001 CB SER 41 226.088 186.654 236.122 1.00 0.00 C ATOM 29002 OG SER 41 224.799 186.105 235.987 1.00 0.00 O ATOM 29003 N GLU 42 224.038 189.089 235.781 1.00 0.00 N ATOM 29004 CA GLU 42 223.268 190.020 234.963 1.00 0.00 C ATOM 29005 C GLU 42 223.575 191.462 235.347 1.00 0.00 C ATOM 29006 O GLU 42 223.878 192.278 234.482 1.00 0.00 O ATOM 29007 CB GLU 42 221.761 189.760 235.110 1.00 0.00 C ATOM 29008 CG GLU 42 221.338 188.415 234.534 1.00 0.00 C ATOM 29009 CD GLU 42 219.841 188.148 234.676 1.00 0.00 C ATOM 29010 OE1 GLU 42 219.359 187.206 234.024 1.00 0.00 O ATOM 29011 OE2 GLU 42 219.145 188.870 235.409 1.00 0.00 O ATOM 29012 N THR 43 223.577 191.766 236.623 1.00 0.00 N ATOM 29013 CA THR 43 223.892 193.120 237.083 1.00 0.00 C ATOM 29014 C THR 43 225.287 193.546 236.648 1.00 0.00 C ATOM 29015 O THR 43 225.455 194.657 236.158 1.00 0.00 O ATOM 29016 CB THR 43 223.764 193.270 238.602 1.00 0.00 C ATOM 29017 CG2 THR 43 222.322 193.125 239.064 1.00 0.00 C ATOM 29018 OG1 THR 43 224.535 192.319 239.295 1.00 0.00 O ATOM 29019 N THR 44 226.269 192.679 236.752 1.00 0.00 N ATOM 29020 CA THR 44 227.630 192.995 236.302 1.00 0.00 C ATOM 29021 C THR 44 227.724 193.142 234.783 1.00 0.00 C ATOM 29022 O THR 44 228.416 194.035 234.303 1.00 0.00 O ATOM 29023 CB THR 44 228.649 191.950 236.774 1.00 0.00 C ATOM 29024 CG2 THR 44 228.832 191.995 238.286 1.00 0.00 C ATOM 29025 OG1 THR 44 228.260 190.638 236.434 1.00 0.00 O ATOM 29026 N ALA 45 227.019 192.324 234.034 1.00 0.00 N ATOM 29027 CA ALA 45 227.015 192.394 232.579 1.00 0.00 C ATOM 29028 C ALA 45 226.325 193.663 232.060 1.00 0.00 C ATOM 29029 O ALA 45 226.819 194.303 231.135 1.00 0.00 O ATOM 29030 CB ALA 45 226.350 191.137 232.024 1.00 0.00 C ATOM 29031 N PHE 46 225.219 194.047 232.663 1.00 0.00 N ATOM 29032 CA PHE 46 224.453 195.211 232.217 1.00 0.00 C ATOM 29033 C PHE 46 225.001 196.544 232.731 1.00 0.00 C ATOM 29034 O PHE 46 224.820 197.569 232.077 1.00 0.00 O ATOM 29035 CB PHE 46 222.983 195.035 232.606 1.00 0.00 C ATOM 29036 CG PHE 46 222.306 193.839 231.980 1.00 0.00 C ATOM 29037 CD1 PHE 46 222.343 193.642 230.593 1.00 0.00 C ATOM 29038 CD2 PHE 46 221.640 192.903 232.783 1.00 0.00 C ATOM 29039 CE1 PHE 46 221.739 192.519 230.025 1.00 0.00 C ATOM 29040 CE2 PHE 46 221.032 191.784 232.216 1.00 0.00 C ATOM 29041 CZ PHE 46 221.086 191.589 230.835 1.00 0.00 C ATOM 29042 N THR 47 225.673 196.544 233.853 1.00 0.00 N ATOM 29043 CA THR 47 226.319 197.751 234.395 1.00 0.00 C ATOM 29044 C THR 47 227.715 197.996 233.832 1.00 0.00 C ATOM 29045 O THR 47 228.330 199.014 234.147 1.00 0.00 O ATOM 29046 CB THR 47 226.387 197.733 235.926 1.00 0.00 C ATOM 29047 CG2 THR 47 225.000 197.747 236.562 1.00 0.00 C ATOM 29048 OG1 THR 47 227.077 196.594 236.388 1.00 0.00 O ATOM 29049 N SER 48 228.217 197.096 233.004 1.00 0.00 N ATOM 29050 CA SER 48 229.523 197.271 232.377 1.00 0.00 C ATOM 29051 C SER 48 229.531 198.518 231.492 1.00 0.00 C ATOM 29052 O SER 48 228.626 198.744 230.685 1.00 0.00 O ATOM 29053 CB SER 48 229.937 196.023 231.594 1.00 0.00 C ATOM 29054 OG SER 48 229.085 195.757 230.508 1.00 0.00 O TER END