| Target: T1200 |
| Target: |
T1200 |
| Type: |
All-group target
|
| Is protein multimer? |
No
|
| Is CAPRI target? |
No |
| Is ligand target? |
No
|
| Entry Date: |
2024-07-26 |
| Server Expiration Date: |
2024-09-20 |
| Human Expiration Date: |
2024-09-27 |
|
| Protein: |
WT_ZLBT-C |
| Organism: |
Staphylococcus aureus |
| Residues: |
129 |
| Method: |
NMR
|
| Additional Information: |
This challenge is to describe the position and orientation of the C-terminal domain of a two-domain protein relative to the N-terminal domain. NMR studies have established that each domain is highly ordered and that they are connected by a six-residue linker that is flexible. The atomic coordinates of each domain have been determined previously and are not part of the challenge (see Specifications). In order to compare predictions with experimental NMR and SAXS data, it is necessary that the predicted coordinates of the atoms within helices 2 and 3 of each domain fall within 0.5 Å RMSD of the pdb coordinates (2LR2 and 4NPD). For evaluation against the NMR RDC data, predicted ensembles will be kernelized by the evaluators to produce a 3D continuous probability distribution whose mean and covariances will be compared with those determined from the data(see Specifications). We also plan to evaluate predictions versus SAXS data. It is critical that submitted ensembles include the population/probability and its uncertainty for each ensemble member. The two targets are described in the Specifications document including the sequences and a description of how predictions will be compared with NMR data.
T1200 is the target with the wild type linker. Conformational ensembles and population estimates should be submitted through the dedicated gateway,
which contains further instructions on preparing submission files. |
Sequence: (Plain text version)
|
Template: (Plain text version)
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