REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0045AL215_1_2 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : ZHU-JUN 
REMARK  ---------------------------------------------------------- 
TARGET     T0045  
AUTHOR     4070-8855-4894  
METHOD     The target is compared with PDB25 database (U.Hobohm et al., 1992).  
METHOD     For each structure in PDB25, a model is built in the following way:  
METHOD     the sequence (query) is compared with NR database using transitive   
METHOD     BLAST (Neuwald et al. 1997). Similar sequences are collected and   
METHOD     purged at score 150.  Those sequences are aligned with query   
METHOD     sequence using Bayesian aligner (Zhu et al., 1998) and a   
METHOD     profile-like model is built (Lawrence et al. 1993; Gribskov et al.,  
METHOD     1987; unpublished result by Jun Zhu, Roland Luthy and Charlse E.   
METHOD     Lawrence).  Then, the target file is compared with the models   
METHOD     derived from PDB25.  
MODEL     1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1ber_A 
ATOM      1  N   GLY    54      14.044  65.860  19.463  1.00  0.00              
ATOM      2  CA  GLY    54      14.285  64.473  19.109  1.00  0.00              
ATOM      3  C   GLY    54      14.964  63.738  20.278  1.00  0.00              
ATOM      4  O   GLY    54      14.473  62.698  20.702  1.00  0.00              
ATOM      5  N   ASP    55      16.073  64.260  20.806  1.00  0.00              
ATOM      6  CA  ASP    55      16.729  63.605  21.947  1.00  0.00              
ATOM      7  C   ASP    55      15.728  63.449  23.119  1.00  0.00              
ATOM      8  O   ASP    55      15.731  62.435  23.839  1.00  0.00              
ATOM      9  N   GLN    56      14.892  64.474  23.302  1.00  0.00              
ATOM     10  CA  GLN    56      13.846  64.470  24.308  1.00  0.00              
ATOM     11  C   GLN    56      12.879  63.373  23.940  1.00  0.00              
ATOM     12  O   GLN    56      12.262  62.769  24.786  1.00  0.00              
ATOM     13  N   LYS    57      12.758  63.127  22.649  1.00  0.00              
ATOM     14  CA  LYS    57      11.908  62.077  22.132  1.00  0.00              
ATOM     15  C   LYS    57      12.575  60.723  22.230  1.00  0.00              
ATOM     16  O   LYS    57      11.919  59.709  21.962  1.00  0.00              
ATOM     17  N   LYS    58      13.868  60.699  22.563  1.00  0.00              
ATOM     18  CA  LYS    58      14.614  59.434  22.677  1.00  0.00              
ATOM     19  C   LYS    58      14.595  58.810  24.083  1.00  0.00              
ATOM     20  O   LYS    58      14.244  57.625  24.228  1.00  0.00              
ATOM     21  N   LEU    59      15.003  59.590  25.098  1.00  0.00              
ATOM     22  CA  LEU    59      15.083  59.127  26.491  1.00  0.00              
ATOM     23  C   LEU    59      13.720  58.642  27.008  1.00  0.00              
ATOM     24  O   LEU    59      13.572  58.302  28.181  1.00  0.00              
ATOM     25  N   ALA    60      12.712  58.676  26.142  1.00  0.00              
ATOM     26  CA  ALA    60      11.360  58.338  26.538  1.00  0.00              
ATOM     27  C   ALA    60      11.091  56.989  25.817  1.00  0.00              
ATOM     28  O   ALA    60      11.154  55.962  26.480  1.00  0.00              
ATOM     29  N   CYS    61      10.869  56.931  24.496  1.00  0.00              
ATOM     30  CA  CYS    61      10.745  55.637  23.727  1.00  0.00              
ATOM     31  C   CYS    61      11.969  55.350  22.877  1.00  0.00              
ATOM     32  O   CYS    61      12.034  55.776  21.729  1.00  0.00              
ATOM     33  N   PHE    62      12.902  54.537  23.380  1.00  0.00              
ATOM     34  CA  PHE    62      14.184  54.312  22.696  1.00  0.00              
ATOM     35  C   PHE    62      14.043  53.766  21.261  1.00  0.00              
ATOM     36  O   PHE    62      14.993  53.821  20.470  1.00  0.00              
ATOM     37  N   VAL    63      12.848  53.311  20.904  1.00  0.00              
ATOM     38  CA  VAL    63      12.653  52.671  19.625  1.00  0.00              
ATOM     39  C   VAL    63      13.221  53.406  18.418  1.00  0.00              
ATOM     40  O   VAL    63      14.062  52.808  17.717  1.00  0.00              
ATOM     41  N   LEU    64      12.816  54.667  18.167  1.00  0.00              
ATOM     42  CA  LEU    64      13.295  55.373  16.956  1.00  0.00              
ATOM     43  C   LEU    64      14.773  55.701  16.961  1.00  0.00              
ATOM     44  O   LEU    64      15.311  55.940  15.867  1.00  0.00              
ATOM     45  N   ALA    65      15.446  55.745  18.113  1.00  0.00              
ATOM     46  CA  ALA    65      16.881  55.939  17.971  1.00  0.00              
ATOM     47  C   ALA    65      17.323  54.705  17.234  1.00  0.00              
ATOM     48  O   ALA    65      18.153  54.775  16.328  1.00  0.00              
ATOM     49  N   THR    66      16.709  53.581  17.605  1.00  0.00              
ATOM     50  CA  THR    66      17.028  52.332  16.953  1.00  0.00              
ATOM     51  C   THR    66      16.657  52.385  15.517  1.00  0.00              
ATOM     52  O   THR    66      17.494  52.024  14.703  1.00  0.00              
ATOM     53  N   ALA    67      15.449  52.827  15.170  1.00  0.00              
ATOM     54  CA  ALA    67      15.096  52.839  13.735  1.00  0.00              
ATOM     55  C   ALA    67      15.974  53.780  12.918  1.00  0.00              
ATOM     56  O   ALA    67      16.183  53.550  11.743  1.00  0.00              
ATOM     57  N   ASN    68      16.528  54.815  13.517  1.00  0.00              
ATOM     58  CA  ASN    68      17.410  55.673  12.750  1.00  0.00              
ATOM     59  C   ASN    68      18.768  54.960  12.568  1.00  0.00              
ATOM     60  O   ASN    68      19.220  54.727  11.451  1.00  0.00              
ATOM     61  N   MET    69      19.415  54.578  13.662  1.00  0.00              
ATOM     62  CA  MET    69      20.719  53.884  13.625  1.00  0.00              
ATOM     63  C   MET    69      20.775  52.740  12.617  1.00  0.00              
ATOM     64  O   MET    69      21.813  52.478  11.992  1.00  0.00              
ATOM     65  N   LEU    70      19.663  52.040  12.476  1.00  0.00              
ATOM     66  CA  LEU    70      19.629  50.945  11.554  1.00  0.00              
ATOM     67  C   LEU    70      19.901  51.440  10.131  1.00  0.00              
ATOM     68  O   LEU    70      20.735  50.855   9.421  1.00  0.00              
ATOM     69  N   ASN    71      19.221  52.526   9.727  1.00  0.00              
ATOM     70  CA  ASN    71      19.362  53.105   8.372  1.00  0.00              
ATOM     71  C   ASN    71      20.757  53.580   8.133  1.00  0.00              
ATOM     72  O   ASN    71      21.231  53.510   7.012  1.00  0.00              
ATOM     73  N   LEU    72      21.414  54.052   9.186  1.00  0.00              
ATOM     74  CA  LEU    72      22.786  54.523   9.091  1.00  0.00              
ATOM     75  C   LEU    72      23.732  53.344   9.010  1.00  0.00              
ATOM     76  O   LEU    72      24.902  53.517   8.733  1.00  0.00              
ATOM     77  N   LYS    73      23.259  52.145   9.311  1.00  0.00              
ATOM     78  CA  LYS    73      24.121  50.970   9.204  1.00  0.00              
ATOM     79  C   LYS    73      24.156  50.560   7.731  1.00  0.00              
ATOM     80  O   LYS    73      25.211  50.337   7.152  1.00  0.00              
ATOM     81  N   LYS    74      22.987  50.464   7.119  1.00  0.00              
ATOM     82  CA  LYS    74      22.920  50.153   5.698  1.00  0.00              
ATOM     83  C   LYS    74      23.799  51.131   4.940  1.00  0.00              
ATOM     84  O   LYS    74      24.712  50.739   4.200  1.00  0.00              
ATOM     85  N   ALA    75      23.537  52.422   5.137  1.00  0.00              
ATOM     86  CA  ALA    75      24.270  53.428   4.383  1.00  0.00              
ATOM     87  C   ALA    75      25.763  53.258   4.407  1.00  0.00              
ATOM     88  O   ALA    75      26.442  53.500   3.420  1.00  0.00              
ATOM     89  N   ALA    76      26.319  52.814   5.505  1.00  0.00              
ATOM     90  CA  ALA    76      27.761  52.718   5.489  1.00  0.00              
ATOM     91  C   ALA    76      28.113  51.476   4.713  1.00  0.00              
ATOM     92  O   ALA    76      29.233  51.355   4.194  1.00  0.00              
ATOM     93  N   LYS    77      27.190  50.518   4.660  1.00  0.00              
ATOM     94  CA  LYS    77      27.510  49.324   3.878  1.00  0.00              
ATOM     95  C   LYS    77      27.444  49.722   2.431  1.00  0.00              
ATOM     96  O   LYS    77      28.398  49.513   1.683  1.00  0.00              
ATOM     97  N   SER    78      26.347  50.346   2.042  1.00  0.00              
ATOM     98  CA  SER    78      26.253  50.702   0.670  1.00  0.00              
ATOM     99  C   SER    78      27.383  51.622   0.227  1.00  0.00              
ATOM    100  O   SER    78      27.978  51.406  -0.846  1.00  0.00              
ATOM    101  N   ILE    79      27.721  52.604   1.052  1.00  0.00              
ATOM    102  CA  ILE    79      28.733  53.532   0.690  1.00  0.00              
ATOM    103  C   ILE    79      30.055  52.911   0.657  1.00  0.00              
ATOM    104  O   ILE    79      30.918  53.374  -0.087  1.00  0.00              
ATOM    105  N   GLY    80      30.259  51.878   1.462  1.00  0.00              
ATOM    106  CA  GLY    80      31.563  51.178   1.477  1.00  0.00              
ATOM    107  C   GLY    80      31.762  50.427   0.187  1.00  0.00              
ATOM    108  O   GLY    80      32.861  50.334  -0.308  1.00  0.00              
ATOM    109  N   VAL    81      30.650  49.883  -0.309  1.00  0.00              
ATOM    110  CA  VAL    81      30.589  49.141  -1.543  1.00  0.00              
ATOM    111  C   VAL    81      30.949  50.110  -2.668  1.00  0.00              
ATOM    112  O   VAL    81      31.856  49.806  -3.488  1.00  0.00              
ATOM    113  N   LYS    82      30.272  51.270  -2.686  1.00  0.00              
ATOM    114  CA  LYS    82      30.550  52.281  -3.708  1.00  0.00              
ATOM    115  C   LYS    82      32.003  52.608  -3.794  1.00  0.00              
ATOM    116  O   LYS    82      32.503  52.849  -4.882  1.00  0.00              
ATOM    117  N   LYS    83      32.684  52.656  -2.652  1.00  0.00              
ATOM    118  CA  LYS    83      34.114  52.926  -2.690  1.00  0.00              
ATOM    119  C   LYS    83      34.848  51.662  -3.126  1.00  0.00              
ATOM    120  O   LYS    83      36.014  51.685  -3.466  1.00  0.00              
ATOM    121  N   VAL    84      34.178  50.519  -3.073  1.00  0.00              
ATOM    122  CA  VAL    84      34.810  49.342  -3.623  1.00  0.00              
ATOM    123  C   VAL    84      34.719  49.479  -5.150  1.00  0.00              
ATOM    124  O   VAL    84      35.727  49.433  -5.891  1.00  0.00              
ATOM    125  N   GLU    85      33.493  49.698  -5.632  1.00  0.00              
ATOM    126  CA  GLU    85      33.268  49.866  -7.061  1.00  0.00              
ATOM    127  C   GLU    85      34.171  50.944  -7.692  1.00  0.00              
ATOM    128  O   GLU    85      34.839  50.661  -8.681  1.00  0.00              
ATOM    129  N   MET    86      34.261  52.142  -7.130  1.00  0.00              
ATOM    130  CA  MET    86      35.111  53.170  -7.727  1.00  0.00              
ATOM    131  C   MET    86      36.531  52.736  -7.784  1.00  0.00              
ATOM    132  O   MET    86      37.214  52.973  -8.747  1.00  0.00              
ATOM    133  N   ALA    87      36.988  52.081  -6.744  1.00  0.00              
ATOM    134  CA  ALA    87      38.371  51.661  -6.713  1.00  0.00              
ATOM    135  C   ALA    87      38.695  50.369  -7.487  1.00  0.00              
ATOM    136  O   ALA    87      39.851  50.177  -7.925  1.00  0.00              
ATOM    137  N   ASP    88      37.733  49.463  -7.644  1.00  0.00              
ATOM    138  CA  ASP    88      38.050  48.207  -8.336  1.00  0.00              
ATOM    139  C   ASP    88      37.510  48.069  -9.758  1.00  0.00              
ATOM    140  O   ASP    88      38.240  47.615 -10.625  1.00  0.00              
ATOM    141  N   LYS    89      36.246  48.412 -10.001  1.00  0.00              
ATOM    142  CA  LYS    89      35.623  48.245 -11.330  1.00  0.00              
ATOM    143  C   LYS    89      36.005  49.277 -12.358  1.00  0.00              
ATOM    144  O   LYS    89      36.425  50.377 -12.007  1.00  0.00              
ATOM    145  N   ASP    90      35.892  48.909 -13.638  1.00  0.00              
ATOM    146  CA  ASP    90      36.075  49.900 -14.701  1.00  0.00              
ATOM    147  C   ASP    90      34.683  50.375 -15.058  1.00  0.00              
ATOM    148  O   ASP    90      33.692  49.779 -14.642  1.00  0.00              
ATOM    149  N   ALA    91      34.597  51.415 -15.863  1.00  0.00              
ATOM    150  CA  ALA    91      33.297  51.997 -16.168  1.00  0.00              
ATOM    151  C   ALA    91      32.211  50.990 -16.565  1.00  0.00              
ATOM    152  O   ALA    91      31.141  50.991 -15.947  1.00  0.00              
ATOM    153  N   ALA    92      32.412  50.135 -17.554  1.00  0.00              
ATOM    154  CA  ALA    92      31.315  49.225 -17.879  1.00  0.00              
ATOM    155  C   ALA    92      30.966  48.455 -16.624  1.00  0.00              
ATOM    156  O   ALA    92      29.806  48.228 -16.340  1.00  0.00              
ATOM    157  N   GLN    93      31.974  48.094 -15.842  1.00  0.00              
ATOM    158  CA  GLN    93      31.715  47.429 -14.582  1.00  0.00              
ATOM    159  C   GLN    93      30.776  48.280 -13.774  1.00  0.00              
ATOM    160  O   GLN    93      29.593  47.947 -13.632  1.00  0.00              
ATOM    161  N   LYS    94      31.269  49.410 -13.275  1.00  0.00              
ATOM    162  CA  LYS    94      30.418  50.321 -12.491  1.00  0.00              
ATOM    163  C   LYS    94      29.060  50.640 -13.185  1.00  0.00              
ATOM    164  O   LYS    94      28.063  50.771 -12.491  1.00  0.00              
ATOM    165  N   SER    95      28.963  50.798 -14.504  1.00  0.00              
ATOM    166  CA  SER    95      27.638  51.093 -15.077  1.00  0.00              
ATOM    167  C   SER    95      26.683  49.885 -15.028  1.00  0.00              
ATOM    168  O   SER    95      25.474  50.048 -14.825  1.00  0.00              
ATOM    169  N   THR    96      27.199  48.677 -15.211  1.00  0.00              
ATOM    170  CA  THR    96      26.341  47.473 -15.131  1.00  0.00              
ATOM    171  C   THR    96      25.727  47.342 -13.740  1.00  0.00              
ATOM    172  O   THR    96      24.539  47.038 -13.595  1.00  0.00              
ATOM    173  N   GLY    97      26.591  47.540 -12.736  1.00  0.00              
ATOM    174  CA  GLY    97      26.270  47.467 -11.307  1.00  0.00              
ATOM    175  C   GLY    97      25.226  48.538 -10.963  1.00  0.00              
ATOM    176  O   GLY    97      24.215  48.214 -10.337  1.00  0.00              
ATOM    177  N   TYR    98      25.450  49.793 -11.370  1.00  0.00              
ATOM    178  CA  TYR    98      24.469  50.865 -11.143  1.00  0.00              
ATOM    179  C   TYR    98      23.115  50.371 -11.656  1.00  0.00              
ATOM    180  O   TYR    98      22.087  50.515 -10.993  1.00  0.00              
ATOM    181  N   LEU    99      23.125  49.787 -12.849  1.00  0.00              
ATOM    182  CA  LEU    99      21.901  49.257 -13.455  1.00  0.00              
ATOM    183  C   LEU    99      21.290  48.048 -12.687  1.00  0.00              
ATOM    184  O   LEU    99      20.046  47.900 -12.646  1.00  0.00              
ATOM    185  N   VAL   100      22.136  47.188 -12.108  1.00  0.00              
ATOM    186  CA  VAL   100      21.672  46.093 -11.237  1.00  0.00              
ATOM    187  C   VAL   100      20.957  46.716 -10.029  1.00  0.00              
ATOM    188  O   VAL   100      19.821  46.363  -9.705  1.00  0.00              
ATOM    189  N   GLY   101      21.613  47.675  -9.387  1.00  0.00              
ATOM    190  CA  GLY   101      21.030  48.421  -8.256  1.00  0.00              
ATOM    191  C   GLY   101      19.686  49.181  -8.610  1.00  0.00              
ATOM    192  O   GLY   101      18.649  48.909  -7.995  1.00  0.00              
ATOM    193  N   GLY   102      19.669  50.091  -9.597  1.00  0.00              
ATOM    194  CA  GLY   102      18.467  50.916  -9.836  1.00  0.00              
ATOM    195  C   GLY   102      17.331  50.046 -10.313  1.00  0.00              
ATOM    196  O   GLY   102      16.128  50.367 -10.134  1.00  0.00              
ATOM    197  N   ILE   103      17.713  48.954 -10.969  1.00  0.00              
ATOM    198  CA  ILE   103      16.698  48.047 -11.455  1.00  0.00              
ATOM    199  C   ILE   103      15.988  47.598 -10.199  1.00  0.00              
ATOM    200  O   ILE   103      14.784  47.459 -10.219  1.00  0.00              
ATOM    201  N   SER   104      16.765  47.445  -9.116  1.00  0.00              
ATOM    202  CA  SER   104      16.331  47.036  -7.767  1.00  0.00              
ATOM    203  C   SER   104      15.688  48.124  -6.893  1.00  0.00              
ATOM    204  O   SER   104      15.044  47.825  -5.885  1.00  0.00              
ATOM    205  N   PRO   105      15.851  49.388  -7.228  1.00  0.00              
ATOM    206  CA  PRO   105      15.254  50.417  -6.382  1.00  0.00              
ATOM    207  C   PRO   105      13.736  50.301  -6.292  1.00  0.00              
ATOM    208  O   PRO   105      13.156  49.477  -6.977  1.00  0.00              
ATOM    209  N   LEU   106      13.095  51.092  -5.396  1.00  0.00              
ATOM    210  CA  LEU   106      11.671  51.387  -5.229  1.00  0.00              
ATOM    211  C   LEU   106      11.008  52.117  -6.387  1.00  0.00              
ATOM    212  O   LEU   106       9.803  52.012  -6.542  1.00  0.00              
END
