REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0046AL215_1_4 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : ZHU-JUN 
REMARK  ---------------------------------------------------------- 
TARGET     T0046  
AUTHOR     4070-8855-4894  
METHOD     The target is compared with PDB25 database (U.Hobohm et al., 1992).  
METHOD     For each structure in PDB25, a model is built in the following way:  
METHOD     the sequence (query) is compared with NR database using transitive   
METHOD     BLAST (Neuwald et al. 1997). Similar sequences are collected and   
METHOD     purged at score 150.  Those sequences are aligned with query   
METHOD     sequence using Bayesian aligner (Zhu et al., 1998) and a   
METHOD     profile-like model is built (Lawrence et al. 1993; Gribskov et al.,  
METHOD     1987; unpublished result by Jun Zhu, Roland Luthy and Charlse E.   
METHOD     Lawrence).  Then, the target file is compared with the models   
METHOD     derived from PDB25.  
MODEL     1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1cid 
ATOM      1  N   VAL    81     -15.559  36.746  44.618  1.00  0.00              
ATOM      2  CA  VAL    81     -16.519  36.759  43.490  1.00  0.00              
ATOM      3  C   VAL    81     -17.083  35.303  43.479  1.00  0.00              
ATOM      4  O   VAL    81     -16.308  34.325  43.328  1.00  0.00              
ATOM      5  N   LEU    82     -18.379  35.332  43.653  1.00  0.00              
ATOM      6  CA  LEU    82     -19.028  34.026  43.676  1.00  0.00              
ATOM      7  C   LEU    82     -20.272  34.087  42.813  1.00  0.00              
ATOM      8  O   LEU    82     -20.919  35.133  42.732  1.00  0.00              
ATOM      9  N   ASN    83     -20.523  32.947  42.197  1.00  0.00              
ATOM     10  CA  ASN    83     -21.725  32.593  41.408  1.00  0.00              
ATOM     11  C   ASN    83     -22.191  31.240  42.044  1.00  0.00              
ATOM     12  O   ASN    83     -21.411  30.273  42.193  1.00  0.00              
ATOM     13  N   PRO    84     -23.436  31.371  42.518  1.00  0.00              
ATOM     14  CA  PRO    84     -24.040  30.269  43.266  1.00  0.00              
ATOM     15  C   PRO    84     -23.190  29.999  44.511  1.00  0.00              
ATOM     16  O   PRO    84     -22.947  30.971  45.269  1.00  0.00              
ATOM     17  N   GLN    85     -22.814  28.747  44.722  1.00  0.00              
ATOM     18  CA  GLN    85     -21.967  28.414  45.887  1.00  0.00              
ATOM     19  C   GLN    85     -20.519  28.327  45.375  1.00  0.00              
ATOM     20  O   GLN    85     -19.575  27.930  46.083  1.00  0.00              
ATOM     21  N   LYS    86     -20.438  28.722  44.100  1.00  0.00              
ATOM     22  CA  LYS    86     -19.157  28.720  43.369  1.00  0.00              
ATOM     23  C   LYS    86     -18.499  30.110  43.393  1.00  0.00              
ATOM     24  O   LYS    86     -18.857  31.240  43.059  1.00  0.00              
ATOM     25  N   GLN    87     -17.324  29.840  43.984  1.00  0.00              
ATOM     26  CA  GLN    87     -16.485  31.037  44.177  1.00  0.00              
ATOM     27  C   GLN    87     -15.565  30.959  42.948  1.00  0.00              
ATOM     28  O   GLN    87     -14.896  29.929  42.933  1.00  0.00              
ATOM     29  N   GLN    88     -15.719  32.025  42.197  1.00  0.00              
ATOM     30  CA  GLN    88     -14.924  32.111  40.992  1.00  0.00              
ATOM     31  C   GLN    88     -13.553  32.540  41.298  1.00  0.00              
ATOM     32  O   GLN    88     -12.566  32.172  40.657  1.00  0.00              
ATOM     33  N   LEU    89     -13.407  33.429  42.251  1.00  0.00              
ATOM     34  CA  LEU    89     -12.068  33.954  42.673  1.00  0.00              
ATOM     35  C   LEU    89     -12.150  34.787  43.965  1.00  0.00              
ATOM     36  O   LEU    89     -13.303  35.087  44.338  1.00  0.00              
ATOM     37  N   ARG    90     -10.934  35.044  44.424  1.00  0.00              
ATOM     38  CA  ARG    90     -10.707  35.841  45.637  1.00  0.00              
ATOM     39  C   ARG    90      -9.377  36.603  45.576  1.00  0.00              
ATOM     40  O   ARG    90      -8.471  36.276  44.863  1.00  0.00              
ATOM     41  N   MET    91      -9.231  37.554  46.421  1.00  0.00              
ATOM     42  CA  MET    91      -8.047  38.373  46.552  1.00  0.00              
ATOM     43  C   MET    91      -7.964  38.968  47.972  1.00  0.00              
ATOM     44  O   MET    91      -9.037  39.381  48.504  1.00  0.00              
ATOM     45  N   ARG    92      -6.782  38.993  48.609  1.00  0.00              
ATOM     46  CA  ARG    92      -6.510  39.492  49.904  1.00  0.00              
ATOM     47  C   ARG    92      -5.636  40.757  49.840  1.00  0.00              
ATOM     48  O   ARG    92      -4.768  40.984  49.014  1.00  0.00              
ATOM     49  N   ILE    93      -5.924  41.459  50.895  1.00  0.00              
ATOM     50  CA  ILE    93      -5.369  42.704  51.360  1.00  0.00              
ATOM     51  C   ILE    93      -5.300  42.725  52.917  1.00  0.00              
ATOM     52  O   ILE    93      -6.161  42.286  53.740  1.00  0.00              
ATOM     53  N   LYS    94      -4.128  43.262  53.270  1.00  0.00              
ATOM     54  CA  LYS    94      -3.775  43.539  54.663  1.00  0.00              
ATOM     55  C   LYS    94      -4.158  45.038  54.782  1.00  0.00              
ATOM     56  O   LYS    94      -3.648  45.997  54.101  1.00  0.00              
ATOM     57  N   LEU    95      -5.086  45.258  55.702  1.00  0.00              
ATOM     58  CA  LEU    95      -5.525  46.650  56.016  1.00  0.00              
ATOM     59  C   LEU    95      -4.694  47.017  57.257  1.00  0.00              
ATOM     60  O   LEU    95      -4.757  48.244  57.037  1.00  0.00              
END
