PFRMAT SS 
TARGET T0046 
AUTHOR 8784-2841-2571 
REMARK Anti-parallel [start(26,58),len:3] 1.00 
REMARK Anti-parallel [start(29,75),len:3] 1.00 
REMARK Anti-parallel [start(4,14),len:3] 1.00 
REMARK Anti-parallel [start(15,76),len:4] 0.80 
REMARK Anti-parallel [start(2,21),len:6] 0.80 
REMARK Anti-parallel [start(34,68),len:4] 0.70 
METHOD Beta-sheet prediction: three-residues and three-residues pair propensities 
METHOD   are processed with a hopfield neural network to find a promising sheet combination. 
METHOD Alpha-helix prediction: PHDsec (developed by B. Rost) result is used. 
MODEL  1 
I C 1.00 
P E 0.80 
S E 0.80 
I E 1.00 
T E 1.00 
A E 1.00 
Y E 0.80 
S C 0.60 
K C 0.60 
N C 0.60 
G C 0.60 
L E 1.00 
K E 1.00 
I E 1.00 
E E 0.80 
F E 0.80 
T E 0.80 
F E 0.80 
E E 0.80 
R E 0.80 
S E 0.80 
N C 0.60 
T C 1.00 
N C 0.60 
P C 0.60 
S E 1.00 
V E 1.00 
T E 1.00 
V E 1.00 
I E 1.00 
T E 1.00 
I C 0.90 
Q C 0.90 
A E 0.70 
S E 0.70 
N E 0.70 
S E 0.70 
T C 0.90 
E C 0.90 
L C 0.90 
D C 0.90 
M C 1.00 
T H 0.50 
D H 0.60 
F H 0.60 
V H 0.60 
F H 0.40 
Q C 1.00 
A C 1.00 
A C 1.00 
V C 1.00 
P C 1.00 
K C 1.00 
T C 1.00 
F C 1.00 
Q E 1.00 
L E 1.00 
Q E 1.00 
L C 0.90 
L C 0.60 
S C 0.60 
P C 0.60 
S C 0.60 
S C 0.90 
S E 0.70 
V E 0.70 
V E 0.70 
P E 0.70 
A C 0.90 
F C 0.90 
N C 0.90 
T C 1.00 
G E 1.00 
T E 1.00 
I E 1.00 
T E 0.80 
Q C 0.90 
V C 0.90 
I C 0.90 
K C 0.90 
V C 0.90 
L C 0.90 
N C 0.90 
P C 0.90 
Q C 0.90 
K H 0.70 
Q H 0.80 
Q H 0.70 
L H 0.60 
R H 0.50 
M H 0.50 
R H 0.40 
I C 1.00 
K C 1.00 
L C 1.00 
T C 1.00 
Y C 0.90 
N C 0.90 
H C 0.90 
K C 1.00 
G C 1.00 
S H 0.80 
A H 0.90 
M H 0.90 
Q H 0.90 
D H 0.90 
L H 0.90 
A H 0.90 
E H 0.90 
V H 0.90 
N H 0.50 
N C 0.90 
F C 0.90 
P C 0.90 
P C 0.90 
Q C 1.00 
S C 1.00 
W C 1.00 
Q C 1.00 
END 
