REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0051AL215_1_1 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : ZHU-JUN 
REMARK  ---------------------------------------------------------- 
TARGET     T0051  
AUTHOR     4070-8855-4894  
METHOD     The target is compared with PDB25 database (U.Hobohm et al., 1992).  
METHOD     For each structure in PDB25, a model is built in the following way:  
METHOD     the sequence (query) is compared with NR database using transitive   
METHOD     BLAST (Neuwald et al. 1997). Similar sequences are collected and   
METHOD     purged at score 150.  Those sequences are aligned with query   
METHOD     sequence using Bayesian aligner (Zhu et al., 1998) and a   
METHOD     profile-like model is built (Lawrence et al. 1993; Gribskov et al.,  
METHOD     1987; unpublished result by Jun Zhu, Roland Luthy and Charlse E.   
METHOD     Lawrence).  Then, the target file is compared with the models   
METHOD     derived from PDB25.  
MODEL     1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1dos_A 
ATOM      1  N   ALA    35      13.680  15.161  25.920  1.00  0.00              
ATOM      2  CA  ALA    35      12.611  15.736  25.110  1.00  0.00              
ATOM      3  C   ALA    35      12.121  14.753  24.048  1.00  0.00              
ATOM      4  O   ALA    35      10.951  14.776  23.673  1.00  0.00              
ATOM      5  N   VAL    36      13.012  13.883  23.579  1.00  0.00              
ATOM      6  CA  VAL    36      12.649  12.866  22.590  1.00  0.00              
ATOM      7  C   VAL    36      11.545  11.975  23.180  1.00  0.00              
ATOM      8  O   VAL    36      10.503  11.762  22.562  1.00  0.00              
ATOM      9  N   ASP    37      11.762  11.496  24.402  1.00  0.00              
ATOM     10  CA  ASP    37      10.772  10.652  25.062  1.00  0.00              
ATOM     11  C   ASP    37       9.493  11.420  25.357  1.00  0.00              
ATOM     12  O   ASP    37       8.413  10.843  25.347  1.00  0.00              
ATOM     13  N   TYR    38       9.604  12.715  25.614  1.00  0.00              
ATOM     14  CA  TYR    38       8.418  13.531  25.878  1.00  0.00              
ATOM     15  C   TYR    38       7.557  13.640  24.631  1.00  0.00              
ATOM     16  O   TYR    38       6.328  13.611  24.711  1.00  0.00              
ATOM     17  N   LEU    39       8.206  13.758  23.475  1.00  0.00              
ATOM     18  CA  LEU    39       7.492  13.852  22.211  1.00  0.00              
ATOM     19  C   LEU    39       6.735  12.548  21.986  1.00  0.00              
ATOM     20  O   LEU    39       5.559  12.567  21.611  1.00  0.00              
ATOM     21  N   LYS    40       7.393  11.420  22.246  1.00  0.00              
ATOM     22  CA  LYS    40       6.756  10.112  22.075  1.00  0.00              
ATOM     23  C   LYS    40       5.602   9.906  23.061  1.00  0.00              
ATOM     24  O   LYS    40       4.590   9.303  22.708  1.00  0.00              
ATOM     25  N   LYS    41       5.743  10.439  24.277  1.00  0.00              
ATOM     26  CA  LYS    41       4.696  10.350  25.294  1.00  0.00              
ATOM     27  C   LYS    41       3.447  11.085  24.805  1.00  0.00              
ATOM     28  O   LYS    41       2.344  10.531  24.832  1.00  0.00              
ATOM     29  N   ILE    42       3.625  12.317  24.333  1.00  0.00              
ATOM     30  CA  ILE    42       2.509  13.126  23.832  1.00  0.00              
ATOM     31  C   ILE    42       1.860  12.472  22.610  1.00  0.00              
ATOM     32  O   ILE    42       0.634  12.522  22.440  1.00  0.00              
ATOM     33  N   PRO    43       2.680  11.847  21.770  1.00  0.00              
ATOM     34  CA  PRO    43       2.190  11.159  20.583  1.00  0.00              
ATOM     35  C   PRO    43       1.251  10.029  21.003  1.00  0.00              
ATOM     36  O   PRO    43       0.164   9.890  20.451  1.00  0.00              
ATOM     37  N   ALA    44       1.659   9.246  22.000  1.00  0.00              
ATOM     38  CA  ALA    44       0.824   8.151  22.481  1.00  0.00              
ATOM     39  C   ALA    44      -0.449   8.647  23.152  1.00  0.00              
ATOM     40  O   ALA    44      -1.508   8.059  22.972  1.00  0.00              
ATOM     41  N   GLU    45      -0.349   9.765  23.870  1.00  0.00              
ATOM     42  CA  GLU    45      -1.490  10.369  24.559  1.00  0.00              
ATOM     43  C   GLU    45      -2.538  10.871  23.565  1.00  0.00              
ATOM     44  O   GLU    45      -3.742  10.769  23.815  1.00  0.00              
ATOM     45  N   LYS    46      -2.069  11.432  22.451  1.00  0.00              
ATOM     46  CA  LYS    46      -2.953  11.975  21.427  1.00  0.00              
ATOM     47  C   LYS    46      -3.252  11.034  20.267  1.00  0.00              
ATOM     48  O   LYS    46      -3.821  11.446  19.267  1.00  0.00              
ATOM     49  N   ASN    47      -2.835   9.781  20.392  1.00  0.00              
ATOM     50  CA  ASN    47      -3.098   8.779  19.364  1.00  0.00              
ATOM     51  C   ASN    47      -2.536   9.095  17.974  1.00  0.00              
ATOM     52  O   ASN    47      -3.250   8.987  16.971  1.00  0.00              
ATOM     53  N   PHE    48      -1.268   9.487  17.908  1.00  0.00              
ATOM     54  CA  PHE    48      -0.629   9.784  16.628  1.00  0.00              
ATOM     55  C   PHE    48       0.810   9.295  16.614  1.00  0.00              
ATOM     56  O   PHE    48       1.373   8.984  17.666  1.00  0.00              
ATOM     57  N   ALA    49       1.371   9.161  15.413  1.00  0.00              
ATOM     58  CA  ALA    49       2.756   8.732  15.234  1.00  0.00              
ATOM     59  C   ALA    49       3.426   9.746  14.321  1.00  0.00              
ATOM     60  O   ALA    49       2.753  10.446  13.560  1.00  0.00              
ATOM     61  N   GLU    50       4.743   9.852  14.423  1.00  0.00              
ATOM     62  CA  GLU    50       5.497  10.788  13.612  1.00  0.00              
ATOM     63  C   GLU    50       6.059  10.149  12.354  1.00  0.00              
ATOM     64  O   GLU    50       6.530   9.010  12.378  1.00  0.00              
END
