REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0052AL168_1_1 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : EISENBERG 
REMARK  ---------------------------------------------------------- 
TARGET T0052  
AUTHOR 4438-1214-3249  
METHOD Alignment of two halves of target to each other.  PHD prediction based  
METHOD on this multiple alignment.  H3PD method (Rice and Eisenberg).  Ten   
METHOD of the top 20 results came from the same class of small inhibitors.  
METHOD Top member of that class chosen.  Alignment duplicated according to  
METHOD alignment of halves, with suspicious end segment dropped.  
MODEL 1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1chl 
ATOM      1  N   THR     7      -5.490  -0.049   8.648  1.00  0.00              
ATOM      2  CA  THR     7      -4.494   0.525   7.699  1.00  0.00              
ATOM      3  C   THR     7      -3.180  -0.251   7.810  1.00  0.00              
ATOM      4  O   THR     7      -2.903  -0.881   8.811  1.00  0.00              
ATOM      5  N   CYS     8      -2.369  -0.211   6.789  1.00  0.00              
ATOM      6  CA  CYS     8      -1.074  -0.949   6.836  1.00  0.00              
ATOM      7  C   CYS     8       0.081   0.051   6.918  1.00  0.00              
ATOM      8  O   CYS     8      -0.125   1.248   6.966  1.00  0.00              
ATOM      9  N   TYR     9       1.295  -0.428   6.937  1.00  0.00              
ATOM     10  CA  TYR     9       2.458   0.497   7.016  1.00  0.00              
ATOM     11  C   TYR     9       2.249   1.661   6.040  1.00  0.00              
ATOM     12  O   TYR     9       1.533   1.534   5.066  1.00  0.00              
ATOM     13  N   ASN    10       2.887   2.758   6.339  1.00  0.00              
ATOM     14  CA  ASN    10       2.747   3.936   5.458  1.00  0.00              
ATOM     15  C   ASN    10       3.174   3.583   4.031  1.00  0.00              
ATOM     16  O   ASN    10       3.263   2.427   3.667  1.00  0.00              
ATOM     17  N   SER    11       3.442   4.571   3.221  1.00  0.00              
ATOM     18  CA  SER    11       3.864   4.296   1.826  1.00  0.00              
ATOM     19  C   SER    11       5.068   5.171   1.472  1.00  0.00              
ATOM     20  O   SER    11       4.967   6.097   0.692  1.00  0.00              
ATOM     21  N   ALA    12       6.207   4.881   2.038  1.00  0.00              
ATOM     22  CA  ALA    12       7.419   5.692   1.734  1.00  0.00              
ATOM     23  C   ALA    12       8.662   4.814   1.879  1.00  0.00              
ATOM     24  O   ALA    12       9.675   5.235   2.400  1.00  0.00              
ATOM     25  N   ILE    13       8.591   3.593   1.424  1.00  0.00              
ATOM     26  CA  ILE    13       9.767   2.687   1.538  1.00  0.00              
ATOM     27  C   ILE    13      10.080   2.081   0.169  1.00  0.00              
ATOM     28  O   ILE    13       9.200   1.861  -0.639  1.00  0.00              
ATOM     29  N   GLN    14      11.327   1.808  -0.096  1.00  0.00              
ATOM     30  CA  GLN    14      11.698   1.215  -1.411  1.00  0.00              
ATOM     31  C   GLN    14      11.068   2.030  -2.541  1.00  0.00              
ATOM     32  O   GLN    14      10.678   3.167  -2.361  1.00  0.00              
ATOM     33  N   GLY    15      10.966   1.454  -3.707  1.00  0.00              
ATOM     34  CA  GLY    15      10.364   2.187  -4.855  1.00  0.00              
ATOM     35  C   GLY    15       9.844   1.179  -5.879  1.00  0.00              
ATOM     36  O   GLY    15       8.756   1.312  -6.403  1.00  0.00              
ATOM     37  N   SER    16      10.617   0.172  -6.167  1.00  0.00              
ATOM     38  CA  SER    16      10.176  -0.850  -7.158  1.00  0.00              
ATOM     39  C   SER    16       9.398  -1.956  -6.441  1.00  0.00              
ATOM     40  O   SER    16       8.997  -2.933  -7.041  1.00  0.00              
ATOM     41  N   VAL    17       9.179  -1.810  -5.162  1.00  0.00              
ATOM     42  CA  VAL    17       8.425  -2.853  -4.412  1.00  0.00              
ATOM     43  C   VAL    17       7.770  -2.226  -3.177  1.00  0.00              
ATOM     44  O   VAL    17       8.007  -2.639  -2.059  1.00  0.00              
ATOM     45  N   LEU    18       6.944  -1.233  -3.372  1.00  0.00              
ATOM     46  CA  LEU    18       6.270  -0.581  -2.212  1.00  0.00              
ATOM     47  C   LEU    18       4.778  -0.907  -2.250  1.00  0.00              
ATOM     48  O   LEU    18       4.212  -1.400  -1.294  1.00  0.00              
ATOM     49  N   THR    19       4.139  -0.634  -3.353  1.00  0.00              
ATOM     50  CA  THR    19       2.681  -0.923  -3.465  1.00  0.00              
ATOM     51  C   THR    19       2.472  -2.410  -3.767  1.00  0.00              
ATOM     52  O   THR    19       1.370  -2.849  -4.031  1.00  0.00              
ATOM     53  N   SER    20       3.518  -3.188  -3.732  1.00  0.00              
ATOM     54  CA  SER    20       3.373  -4.643  -4.017  1.00  0.00              
ATOM     55  C   SER    20       2.846  -5.360  -2.771  1.00  0.00              
ATOM     56  O   SER    20       2.440  -6.503  -2.829  1.00  0.00              
ATOM     57  N   THR    21       2.851  -4.702  -1.643  1.00  0.00              
ATOM     58  CA  THR    21       2.352  -5.359  -0.399  1.00  0.00              
ATOM     59  C   THR    21       1.326  -4.461   0.299  1.00  0.00              
ATOM     60  O   THR    21       0.625  -4.893   1.192  1.00  0.00              
ATOM     61  N   CYS    22       1.225  -3.221  -0.094  1.00  0.00              
ATOM     62  CA  CYS    22       0.235  -2.317   0.558  1.00  0.00              
ATOM     63  C   CYS    22      -1.177  -2.762   0.174  1.00  0.00              
ATOM     64  O   CYS    22      -1.962  -3.161   1.010  1.00  0.00              
ATOM     65  N   GLU    23      -1.502  -2.700  -1.087  1.00  0.00              
ATOM     66  CA  GLU    23      -2.860  -3.123  -1.530  1.00  0.00              
ATOM     67  C   GLU    23      -3.180  -4.497  -0.942  1.00  0.00              
ATOM     68  O   GLU    23      -4.254  -4.727  -0.426  1.00  0.00              
ATOM     69  N   ARG    24      -2.256  -5.415  -1.030  1.00  0.00              
ATOM     70  CA  ARG    24      -2.505  -6.783  -0.490  1.00  0.00              
ATOM     71  C   ARG    24      -2.771  -6.712   1.016  1.00  0.00              
ATOM     72  O   ARG    24      -3.593  -7.435   1.543  1.00  0.00              
ATOM     73  N   THR    25      -2.085  -5.850   1.715  1.00  0.00              
ATOM     74  CA  THR    25      -2.307  -5.746   3.185  1.00  0.00              
ATOM     75  C   THR    25      -3.801  -5.589   3.458  1.00  0.00              
ATOM     76  O   THR    25      -4.343  -6.177   4.373  1.00  0.00              
ATOM     77  N   ASN    26      -4.467  -4.792   2.673  1.00  0.00              
ATOM     78  CA  ASN    26      -5.926  -4.584   2.885  1.00  0.00              
ATOM     79  C   ASN    26      -6.717  -5.746   2.279  1.00  0.00              
ATOM     80  O   ASN    26      -7.740  -6.146   2.797  1.00  0.00              
ATOM     81  N   GLY    27      -6.257  -6.292   1.188  1.00  0.00              
ATOM     82  CA  GLY    27      -6.992  -7.426   0.559  1.00  0.00              
ATOM     83  C   GLY    27      -6.379  -7.742  -0.806  1.00  0.00              
ATOM     84  O   GLY    27      -6.027  -8.869  -1.092  1.00  0.00              
ATOM     85  N   GLY    28      -6.245  -6.757  -1.651  1.00  0.00              
ATOM     86  CA  GLY    28      -5.656  -7.000  -2.990  1.00  0.00              
ATOM     87  C   GLY    28      -6.707  -6.744  -4.070  1.00  0.00              
ATOM     88  O   GLY    28      -7.875  -6.566  -3.785  1.00  0.00              
ATOM     89  N   TYR    29      -6.478  -1.622  -1.744  1.00  0.00              
ATOM     90  CA  TYR    29      -5.443  -1.023  -0.857  1.00  0.00              
ATOM     91  C   TYR    29      -4.409  -0.277  -1.703  1.00  0.00              
ATOM     92  O   TYR    29      -3.848  -0.817  -2.635  1.00  0.00              
ATOM     93  N   ASN    30      -4.156   0.966  -1.390  1.00  0.00              
ATOM     94  CA  ASN    30      -3.162   1.741  -2.185  1.00  0.00              
ATOM     95  C   ASN    30      -2.418   2.724  -1.278  1.00  0.00              
ATOM     96  O   ASN    30      -2.603   2.746  -0.076  1.00  0.00              
ATOM     97  N   THR    31      -1.572   3.536  -1.854  1.00  0.00              
ATOM     98  CA  THR    31      -0.799   4.521  -1.047  1.00  0.00              
ATOM     99  C   THR    31      -1.553   5.859  -1.000  1.00  0.00              
ATOM    100  O   THR    31      -1.472   6.650  -1.919  1.00  0.00              
ATOM    101  N   SER    32      -2.285   6.131   0.053  1.00  0.00              
ATOM    102  CA  SER    32      -3.024   7.422   0.122  1.00  0.00              
ATOM    103  C   SER    32      -2.191   8.448   0.890  1.00  0.00              
ATOM    104  O   SER    32      -2.161   8.452   2.104  1.00  0.00              
END
