REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0054AL215_1_3 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : ZHU-JUN 
REMARK  ---------------------------------------------------------- 
TARGET     T0054  
AUTHOR     4070-8855-4894  
METHOD     The target is compared with PDB25 database (U.Hobohm et al., 1992).  
METHOD     For each structure in PDB25, a model is built in the following way:  
METHOD     the sequence (query) is compared with NR database using transitive   
METHOD     BLAST (Neuwald et al. 1997). Similar sequences are collected and   
METHOD     purged at score 150.  Those sequences are aligned with query   
METHOD     sequence using Bayesian aligner (Zhu et al., 1998) and a   
METHOD     profile-like model is built (Lawrence et al. 1993; Gribskov et al.,  
METHOD     1987; unpublished result by Jun Zhu, Roland Luthy and Charlse E.   
METHOD     Lawrence).  Then, the target file is compared with the models   
METHOD     derived from PDB25.  
MODEL     1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 2nac_A 
ATOM      1  N   VAL   110      13.282  42.540  49.923  1.00  0.00              
ATOM      2  CA  VAL   110      13.142  43.689  49.053  1.00  0.00              
ATOM      3  C   VAL   110      13.649  43.381  47.629  1.00  0.00              
ATOM      4  O   VAL   110      13.045  43.841  46.653  1.00  0.00              
ATOM      5  N   ALA   111      14.749  42.677  47.482  1.00  0.00              
ATOM      6  CA  ALA   111      15.280  42.322  46.190  1.00  0.00              
ATOM      7  C   ALA   111      14.358  41.356  45.447  1.00  0.00              
ATOM      8  O   ALA   111      14.378  41.352  44.225  1.00  0.00              
ATOM      9  N   SER   112      13.621  40.525  46.104  1.00  0.00              
ATOM     10  CA  SER   112      12.730  39.576  45.528  1.00  0.00              
ATOM     11  C   SER   112      11.426  40.284  45.175  1.00  0.00              
ATOM     12  O   SER   112      10.821  40.090  44.114  1.00  0.00              
ATOM     13  N   LYS   113      11.030  41.114  46.147  1.00  0.00              
ATOM     14  CA  LYS   113       9.806  41.887  45.893  1.00  0.00              
ATOM     15  C   LYS   113       9.895  42.847  44.694  1.00  0.00              
ATOM     16  O   LYS   113       8.933  43.111  43.963  1.00  0.00              
ATOM     17  N   SER   114      11.024  43.471  44.415  1.00  0.00              
ATOM     18  CA  SER   114      11.320  44.418  43.403  1.00  0.00              
ATOM     19  C   SER   114      11.734  43.786  42.096  1.00  0.00              
ATOM     20  O   SER   114      12.036  44.460  41.121  1.00  0.00              
ATOM     21  N   SER   115      11.791  42.452  41.993  1.00  0.00              
ATOM     22  CA  SER   115      12.173  41.714  40.832  1.00  0.00              
ATOM     23  C   SER   115      13.618  41.715  40.479  1.00  0.00              
ATOM     24  O   SER   115      13.975  41.374  39.348  1.00  0.00              
ATOM     25  N   HIS   116      14.558  42.088  41.362  1.00  0.00              
ATOM     26  CA  HIS   116      15.976  42.148  41.017  1.00  0.00              
ATOM     27  C   HIS   116      16.591  40.776  41.109  1.00  0.00              
ATOM     28  O   HIS   116      17.407  40.421  40.301  1.00  0.00              
ATOM     29  N   SER   117      16.127  40.059  42.114  1.00  0.00              
ATOM     30  CA  SER   117      16.520  38.706  42.376  1.00  0.00              
ATOM     31  C   SER   117      15.334  37.795  41.872  1.00  0.00              
ATOM     32  O   SER   117      14.207  38.047  42.179  1.00  0.00              
ATOM     33  N   ARG   118      15.633  36.681  41.257  1.00  0.00              
ATOM     34  CA  ARG   118      14.691  35.703  40.762  1.00  0.00              
ATOM     35  C   ARG   118      14.368  34.551  41.666  1.00  0.00              
ATOM     36  O   ARG   118      13.397  33.789  41.505  1.00  0.00              
ATOM     37  N   GLY   119      15.136  34.433  42.774  1.00  0.00              
ATOM     38  CA  GLY   119      14.866  33.423  43.766  1.00  0.00              
ATOM     39  C   GLY   119      15.908  33.431  44.936  1.00  0.00              
ATOM     40  O   GLY   119      17.051  33.876  44.675  1.00  0.00              
ATOM     41  N   SER   120      15.448  32.932  46.027  1.00  0.00              
ATOM     42  CA  SER   120      16.302  32.793  47.223  1.00  0.00              
ATOM     43  C   SER   120      15.821  31.537  47.919  1.00  0.00              
ATOM     44  O   SER   120      14.643  31.280  48.138  1.00  0.00              
ATOM     45  N   ALA   121      16.816  30.678  48.295  1.00  0.00              
ATOM     46  CA  ALA   121      16.489  29.517  49.035  1.00  0.00              
ATOM     47  C   ALA   121      17.635  29.155  50.069  1.00  0.00              
ATOM     48  O   ALA   121      18.732  29.467  49.704  1.00  0.00              
ATOM     49  N   ILE   122      17.231  28.458  51.053  1.00  0.00              
ATOM     50  CA  ILE   122      18.198  27.935  52.025  1.00  0.00              
ATOM     51  C   ILE   122      17.447  27.337  53.164  1.00  0.00              
ATOM     52  O   ILE   122      16.217  27.294  53.149  1.00  0.00              
ATOM     53  N   ASP   123      18.199  26.849  54.181  1.00  0.00              
ATOM     54  CA  ASP   123      17.616  26.258  55.361  1.00  0.00              
ATOM     55  C   ASP   123      18.075  26.965  56.648  1.00  0.00              
ATOM     56  O   ASP   123      17.671  26.484  57.695  1.00  0.00              
END
