REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0057AL215_1_12 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : ZHU-JUN 
REMARK  ---------------------------------------------------------- 
TARGET     T0057  
AUTHOR     4070-8855-4894  
METHOD     The target is compared with PDB25 database (U.Hobohm et al., 1992).  
METHOD     For each structure in PDB25, a model is built in the following way:  
METHOD     the sequence (query) is compared with NR database using transitive   
METHOD     BLAST (Neuwald et al. 1997). Similar sequences are collected and   
METHOD     purged at score 150.  Those sequences are aligned with query   
METHOD     sequence using Bayesian aligner (Zhu et al., 1998) and a   
METHOD     profile-like model is built (Lawrence et al. 1993; Gribskov et al.,  
METHOD     1987; unpublished result by Jun Zhu, Roland Luthy and Charlse E.   
METHOD     Lawrence).  Then, the target file is compared with the models   
METHOD     derived from PDB25.  
MODEL     1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1hdg_O 
ATOM      1  N   LEU   248      26.868  64.748 126.000  1.00  0.00              
ATOM      2  CA  LEU   248      26.602  65.408 127.264  1.00  0.00              
ATOM      3  C   LEU   248      25.115  65.712 127.481  1.00  0.00              
ATOM      4  O   LEU   248      24.690  66.032 128.595  1.00  0.00              
ATOM      5  N   ILE   249      24.316  65.587 126.429  1.00  0.00              
ATOM      6  CA  ILE   249      22.887  65.858 126.535  1.00  0.00              
ATOM      7  C   ILE   249      22.155  64.916 127.485  1.00  0.00              
ATOM      8  O   ILE   249      22.558  63.767 127.665  1.00  0.00              
ATOM      9  N   SER   250      21.047  65.391 128.046  1.00  0.00              
ATOM     10  CA  SER   250      20.216  64.579 128.926  1.00  0.00              
ATOM     11  C   SER   250      19.395  63.632 128.052  1.00  0.00              
ATOM     12  O   SER   250      19.068  62.514 128.456  1.00  0.00              
ATOM     13  N   SER   251      19.069  64.104 126.850  1.00  0.00              
ATOM     14  CA  SER   251      18.294  63.345 125.882  1.00  0.00              
ATOM     15  C   SER   251      18.469  63.959 124.496  1.00  0.00              
ATOM     16  O   SER   251      18.766  65.153 124.342  1.00  0.00              
ATOM     17  N   LYS   252      18.360  63.135 123.470  1.00  0.00              
ATOM     18  CA  LYS   252      18.505  63.637 122.129  1.00  0.00              
ATOM     19  C   LYS   252      17.224  63.273 121.412  1.00  0.00              
ATOM     20  O   LYS   252      16.917  62.082 121.216  1.00  0.00              
ATOM     21  N   TYR   253      16.441  64.310 121.116  1.00  0.00              
ATOM     22  CA  TYR   253      15.176  64.163 120.431  1.00  0.00              
ATOM     23  C   TYR   253      15.443  63.617 119.017  1.00  0.00              
ATOM     24  O   TYR   253      16.173  64.232 118.233  1.00  0.00              
ATOM     25  N   ASP   254      14.835  62.480 118.685  1.00  0.00              
ATOM     26  CA  ASP   254      15.026  61.856 117.376  1.00  0.00              
ATOM     27  C   ASP   254      13.829  62.152 116.488  1.00  0.00              
ATOM     28  O   ASP   254      12.788  61.495 116.606  1.00  0.00              
ATOM     29  N   ALA   255      14.002  63.105 115.569  1.00  0.00              
ATOM     30  CA  ALA   255      12.947  63.533 114.640  1.00  0.00              
ATOM     31  C   ALA   255      12.524  62.468 113.644  1.00  0.00              
ATOM     32  O   ALA   255      11.446  62.570 113.053  1.00  0.00              
ATOM     33  N   GLU   256      13.377  61.472 113.437  1.00  0.00              
ATOM     34  CA  GLU   256      13.091  60.395 112.498  1.00  0.00              
ATOM     35  C   GLU   256      12.093  59.380 113.026  1.00  0.00              
ATOM     36  O   GLU   256      11.670  58.498 112.296  1.00  0.00              
ATOM     37  N   ALA   257      11.756  59.465 114.304  1.00  0.00              
ATOM     38  CA  ALA   257      10.830  58.523 114.913  1.00  0.00              
ATOM     39  C   ALA   257       9.445  59.107 115.214  1.00  0.00              
ATOM     40  O   ALA   257       8.465  58.352 115.356  1.00  0.00              
ATOM     41  N   THR   258       9.358  60.441 115.267  1.00  0.00              
ATOM     42  CA  THR   258       8.101  61.133 115.554  1.00  0.00              
ATOM     43  C   THR   258       6.981  60.655 114.653  1.00  0.00              
ATOM     44  O   THR   258       7.134  60.592 113.434  1.00  0.00              
ATOM     45  N   ALA   259       5.843  60.370 115.264  1.00  0.00              
ATOM     46  CA  ALA   259       4.693  59.855 114.547  1.00  0.00              
ATOM     47  C   ALA   259       3.421  60.335 115.237  1.00  0.00              
ATOM     48  O   ALA   259       3.392  60.513 116.460  1.00  0.00              
ATOM     49  N   GLU   260       2.392  60.615 114.447  1.00  0.00              
ATOM     50  CA  GLU   260       1.124  61.062 114.995  1.00  0.00              
ATOM     51  C   GLU   260       0.046  60.316 114.248  1.00  0.00              
ATOM     52  O   GLU   260       0.129  60.190 113.028  1.00  0.00              
ATOM     53  N   LEU   261      -0.902  59.734 114.974  1.00  0.00              
ATOM     54  CA  LEU   261      -2.024  59.065 114.335  1.00  0.00              
ATOM     55  C   LEU   261      -3.294  59.641 114.933  1.00  0.00              
ATOM     56  O   LEU   261      -3.359  59.920 116.138  1.00  0.00              
ATOM     57  N   VAL   262      -4.262  59.929 114.065  1.00  0.00              
ATOM     58  CA  VAL   262      -5.514  60.511 114.517  1.00  0.00              
ATOM     59  C   VAL   262      -5.308  61.949 114.966  1.00  0.00              
ATOM     60  O   VAL   262      -6.103  62.483 115.742  1.00  0.00              
ATOM     61  N   GLU   263      -4.219  62.559 114.491  1.00  0.00              
ATOM     62  CA  GLU   263      -3.874  63.931 114.822  1.00  0.00              
ATOM     63  C   GLU   263      -3.687  64.175 116.298  1.00  0.00              
ATOM     64  O   GLU   263      -3.345  65.276 116.683  1.00  0.00              
ATOM     65  N   VAL   264      -3.811  63.142 117.122  1.00  0.00              
ATOM     66  CA  VAL   264      -3.704  63.336 118.552  1.00  0.00              
ATOM     67  C   VAL   264      -2.816  62.366 119.294  1.00  0.00              
ATOM     68  O   VAL   264      -2.388  62.689 120.407  1.00  0.00              
END
