REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0057AL215_1_6 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : ZHU-JUN 
REMARK  ---------------------------------------------------------- 
TARGET     T0057  
AUTHOR     4070-8855-4894  
METHOD     The target is compared with PDB25 database (U.Hobohm et al., 1992).  
METHOD     For each structure in PDB25, a model is built in the following way:  
METHOD     the sequence (query) is compared with NR database using transitive   
METHOD     BLAST (Neuwald et al. 1997). Similar sequences are collected and   
METHOD     purged at score 150.  Those sequences are aligned with query   
METHOD     sequence using Bayesian aligner (Zhu et al., 1998) and a   
METHOD     profile-like model is built (Lawrence et al. 1993; Gribskov et al.,  
METHOD     1987; unpublished result by Jun Zhu, Roland Luthy and Charlse E.   
METHOD     Lawrence).  Then, the target file is compared with the models   
METHOD     derived from PDB25.  
MODEL     1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1hdg_O 
ATOM      1  N   SER    78      34.217  69.318 154.106  1.00  0.00              
ATOM      2  CA  SER    78      33.366  68.977 152.983  1.00  0.00              
ATOM      3  C   SER    78      32.075  69.806 152.946  1.00  0.00              
ATOM      4  O   SER    78      31.270  69.743 153.870  1.00  0.00              
ATOM      5  N   ASP    79      31.887  70.575 151.874  1.00  0.00              
ATOM      6  CA  ASP    79      30.681  71.379 151.705  1.00  0.00              
ATOM      7  C   ASP    79      29.587  70.523 151.091  1.00  0.00              
ATOM      8  O   ASP    79      28.515  70.348 151.684  1.00  0.00              
ATOM      9  N   ILE    80      29.878  69.952 149.920  1.00  0.00              
ATOM     10  CA  ILE    80      28.913  69.114 149.201  1.00  0.00              
ATOM     11  C   ILE    80      29.371  67.686 149.007  1.00  0.00              
ATOM     12  O   ILE    80      30.552  67.410 148.768  1.00  0.00              
ATOM     13  N   VAL    81      28.425  66.772 149.109  1.00  0.00              
ATOM     14  CA  VAL    81      28.713  65.372 148.890  1.00  0.00              
ATOM     15  C   VAL    81      27.850  64.846 147.756  1.00  0.00              
ATOM     16  O   VAL    81      26.673  65.191 147.636  1.00  0.00              
ATOM     17  N   VAL    82      28.470  64.070 146.881  1.00  0.00              
ATOM     18  CA  VAL    82      27.771  63.447 145.775  1.00  0.00              
ATOM     19  C   VAL    82      27.511  62.033 146.266  1.00  0.00              
ATOM     20  O   VAL    82      28.444  61.283 146.547  1.00  0.00              
ATOM     21  N   ASP    83      26.238  61.726 146.484  1.00  0.00              
ATOM     22  CA  ASP    83      25.821  60.426 146.970  1.00  0.00              
ATOM     23  C   ASP    83      25.485  59.489 145.802  1.00  0.00              
ATOM     24  O   ASP    83      24.340  59.450 145.305  1.00  0.00              
ATOM     25  N   THR    84      26.487  58.714 145.388  1.00  0.00              
ATOM     26  CA  THR    84      26.333  57.785 144.276  1.00  0.00              
ATOM     27  C   THR    84      26.584  56.297 144.569  1.00  0.00              
ATOM     28  O   THR    84      27.078  55.568 143.704  1.00  0.00              
ATOM     29  N   THR    85      26.248  55.844 145.778  1.00  0.00              
ATOM     30  CA  THR    85      26.431  54.439 146.149  1.00  0.00              
ATOM     31  C   THR    85      25.201  53.668 145.707  1.00  0.00              
ATOM     32  O   THR    85      25.257  52.461 145.429  1.00  0.00              
ATOM     33  N   PRO    86      24.080  54.378 145.681  1.00  0.00              
ATOM     34  CA  PRO    86      22.828  53.778 145.296  1.00  0.00              
ATOM     35  C   PRO    86      22.099  53.192 146.486  1.00  0.00              
ATOM     36  O   PRO    86      21.001  52.673 146.290  1.00  0.00              
ATOM     37  N   ASN    87      22.666  53.281 147.701  1.00  0.00              
ATOM     38  CA  ASN    87      22.013  52.716 148.900  1.00  0.00              
ATOM     39  C   ASN    87      21.589  53.715 149.987  1.00  0.00              
ATOM     40  O   ASN    87      21.067  53.318 151.023  1.00  0.00              
ATOM     41  N   GLY    88      21.784  55.007 149.749  1.00  0.00              
ATOM     42  CA  GLY    88      21.409  56.022 150.737  1.00  0.00              
ATOM     43  C   GLY    88      20.484  57.029 150.105  1.00  0.00              
ATOM     44  O   GLY    88      20.736  58.229 150.148  1.00  0.00              
ATOM     45  N   VAL    89      19.381  56.523 149.564  1.00  0.00              
ATOM     46  CA  VAL    89      18.410  57.354 148.861  1.00  0.00              
ATOM     47  C   VAL    89      17.326  58.068 149.677  1.00  0.00              
ATOM     48  O   VAL    89      16.775  59.077 149.243  1.00  0.00              
ATOM     49  N   GLY    90      17.021  57.552 150.857  1.00  0.00              
ATOM     50  CA  GLY    90      16.017  58.178 151.707  1.00  0.00              
ATOM     51  C   GLY    90      16.689  59.229 152.573  1.00  0.00              
ATOM     52  O   GLY    90      17.863  59.092 152.930  1.00  0.00              
END
