REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0057AL215_1_9 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : ZHU-JUN 
REMARK  ---------------------------------------------------------- 
TARGET     T0057  
AUTHOR     4070-8855-4894  
METHOD     The target is compared with PDB25 database (U.Hobohm et al., 1992).  
METHOD     For each structure in PDB25, a model is built in the following way:  
METHOD     the sequence (query) is compared with NR database using transitive   
METHOD     BLAST (Neuwald et al. 1997). Similar sequences are collected and   
METHOD     purged at score 150.  Those sequences are aligned with query   
METHOD     sequence using Bayesian aligner (Zhu et al., 1998) and a   
METHOD     profile-like model is built (Lawrence et al. 1993; Gribskov et al.,  
METHOD     1987; unpublished result by Jun Zhu, Roland Luthy and Charlse E.   
METHOD     Lawrence).  Then, the target file is compared with the models   
METHOD     derived from PDB25.  
MODEL     1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1hdg_O 
ATOM      1  N   ALA   162       8.182  53.838 127.507  1.00  0.00              
ATOM      2  CA  ALA   162       8.917  52.588 127.595  1.00  0.00              
ATOM      3  C   ALA   162      10.349  52.880 127.209  1.00  0.00              
ATOM      4  O   ALA   162      10.610  53.347 126.112  1.00  0.00              
ATOM      5  N   THR   163      11.268  52.697 128.142  1.00  0.00              
ATOM      6  CA  THR   163      12.669  52.919 127.842  1.00  0.00              
ATOM      7  C   THR   163      13.353  51.578 127.539  1.00  0.00              
ATOM      8  O   THR   163      13.154  50.586 128.273  1.00  0.00              
ATOM      9  N   ILE   164      14.034  51.514 126.395  1.00  0.00              
ATOM     10  CA  ILE   164      14.802  50.326 125.976  1.00  0.00              
ATOM     11  C   ILE   164      16.149  50.779 126.517  1.00  0.00              
ATOM     12  O   ILE   164      16.795  51.693 125.983  1.00  0.00              
ATOM     13  N   VAL   165      16.522  50.147 127.619  1.00  0.00              
ATOM     14  CA  VAL   165      17.652  50.545 128.430  1.00  0.00              
ATOM     15  C   VAL   165      18.841  49.576 128.490  1.00  0.00              
ATOM     16  O   VAL   165      18.651  48.380 128.589  1.00  0.00              
ATOM     17  N   ARG   166      20.067  50.088 128.445  1.00  0.00              
ATOM     18  CA  ARG   166      21.243  49.225 128.569  1.00  0.00              
ATOM     19  C   ARG   166      21.250  48.626 129.976  1.00  0.00              
ATOM     20  O   ARG   166      20.650  49.194 130.893  1.00  0.00              
ATOM     21  N   ARG   167      21.925  47.506 130.174  1.00  0.00              
ATOM     22  CA  ARG   167      21.939  46.922 131.501  1.00  0.00              
ATOM     23  C   ARG   167      22.833  47.730 132.453  1.00  0.00              
ATOM     24  O   ARG   167      23.605  48.583 132.005  1.00  0.00              
ATOM     25  N   ALA   168      22.683  47.517 133.759  1.00  0.00              
ATOM     26  CA  ALA   168      23.489  48.223 134.757  1.00  0.00              
ATOM     27  C   ALA   168      23.966  47.260 135.844  1.00  0.00              
ATOM     28  O   ALA   168      23.587  46.084 135.865  1.00  0.00              
ATOM     29  N   ALA   169      24.756  47.779 136.776  1.00  0.00              
ATOM     30  CA  ALA   169      25.279  46.964 137.855  1.00  0.00              
ATOM     31  C   ALA   169      24.230  46.498 138.839  1.00  0.00              
ATOM     32  O   ALA   169      24.544  45.784 139.778  1.00  0.00              
ATOM     33  N   ASP   170      22.982  46.884 138.636  1.00  0.00              
ATOM     34  CA  ASP   170      21.957  46.423 139.541  1.00  0.00              
ATOM     35  C   ASP   170      21.490  45.072 139.052  1.00  0.00              
ATOM     36  O   ASP   170      20.723  44.387 139.724  1.00  0.00              
ATOM     37  N   GLN   171      21.937  44.698 137.862  1.00  0.00              
ATOM     38  CA  GLN   171      21.552  43.431 137.272  1.00  0.00              
ATOM     39  C   GLN   171      22.516  42.298 137.626  1.00  0.00              
ATOM     40  O   GLN   171      23.335  42.459 138.531  1.00  0.00              
ATOM     41  N   LYS   172      22.396  41.158 136.943  1.00  0.00              
ATOM     42  CA  LYS   172      23.213  39.973 137.227  1.00  0.00              
ATOM     43  C   LYS   172      23.882  39.420 135.996  1.00  0.00              
ATOM     44  O   LYS   172      23.318  39.494 134.914  1.00  0.00              
ATOM     45  N   GLU   173      25.038  38.778 136.174  1.00  0.00              
ATOM     46  CA  GLU   173      25.776  38.160 135.060  1.00  0.00              
ATOM     47  C   GLU   173      24.975  36.941 134.604  1.00  0.00              
ATOM     48  O   GLU   173      24.639  36.815 133.434  1.00  0.00              
ATOM     49  N   VAL   174      24.658  36.053 135.537  1.00  0.00              
ATOM     50  CA  VAL   174      23.849  34.876 135.244  1.00  0.00              
ATOM     51  C   VAL   174      22.769  34.837 136.320  1.00  0.00              
ATOM     52  O   VAL   174      22.862  35.543 137.305  1.00  0.00              
ATOM     53  N   LYS   175      21.747  34.023 136.134  1.00  0.00              
ATOM     54  CA  LYS   175      20.648  33.935 137.085  1.00  0.00              
ATOM     55  C   LYS   175      21.068  33.866 138.559  1.00  0.00              
ATOM     56  O   LYS   175      21.606  32.865 139.003  1.00  0.00              
ATOM     57  N   LYS   176      20.806  34.938 139.302  1.00  0.00              
ATOM     58  CA  LYS   176      21.150  35.057 140.720  1.00  0.00              
ATOM     59  C   LYS   176      20.019  35.786 141.420  1.00  0.00              
ATOM     60  O   LYS   176      19.362  36.622 140.812  1.00  0.00              
ATOM     61  N   GLY   177      19.810  35.527 142.722  1.00  0.00              
ATOM     62  CA  GLY   177      18.734  36.188 143.488  1.00  0.00              
ATOM     63  C   GLY   177      18.769  37.708 143.401  1.00  0.00              
ATOM     64  O   GLY   177      19.845  38.318 143.370  1.00  0.00              
ATOM     65  N   PRO   178      17.589  38.314 143.387  1.00  0.00              
ATOM     66  CA  PRO   178      17.455  39.760 143.312  1.00  0.00              
ATOM     67  C   PRO   178      16.029  40.051 143.802  1.00  0.00              
ATOM     68  O   PRO   178      15.183  39.162 143.784  1.00  0.00              
ATOM     69  N   ILE   179      15.768  41.258 144.297  1.00  0.00              
ATOM     70  CA  ILE   179      14.414  41.606 144.739  1.00  0.00              
ATOM     71  C   ILE   179      13.475  41.408 143.556  1.00  0.00              
ATOM     72  O   ILE   179      12.451  40.749 143.649  1.00  0.00              
END
