PFRMAT SS 
TARGET T0059 
AUTHOR 7936-3040-4355 
REMARK ---------------------------- 
METHOD Secondary structure prediction by bootstrapping a multiple 
METHOD sequence alignment (using a home-grown multiple sequence 
METHOD alignment method involving intermediate sequences) and getting 
METHOD a prediction from three different methods and taking the consensus. 
REMARK ---------------------------- 
MODEL 1 
M C 1.0 
S C 1.0 
I C 1.0 
G C 1.0 
V C 0.7 
P C 0.7 
I C 0.7 
K H 0.7 
V H 0.3 
L H 0.3 
H H 0.3 
E C 0.7 
A C 0.7 
E C 1.0 
G C 1.0 
H C 1.0 
I E 0.7 
V E 1.0 
T E 1.0 
C E 1.0 
E E 1.0 
T E 1.0 
N C 1.0 
T C 1.0 
G C 1.0 
E C 1.0 
V C 0.7 
Y E 0.7 
R E 0.7 
G E 0.7 
K E 0.7 
L E 0.7 
I E 0.7 
E E 0.7 
A C 0.7 
E C 1.0 
D C 1.0 
N C 1.0 
M C 0.7 
N C 0.7 
C C 0.7 
Q H 0.3 
M H 0.3 
S H 0.3 
N E 0.7 
I E 1.0 
T E 1.0 
V E 1.0 
T E 1.0 
Y C 0.7 
R C 0.7 
D C 1.0 
G C 1.0 
R C 1.0 
V C 1.0 
A C 1.0 
Q C 0.7 
L E 0.7 
E E 0.7 
Q E 0.7 
V E 1.0 
Y E 1.0 
I E 1.0 
R C 0.7 
G C 1.0 
S C 1.0 
K C 1.0 
I E 1.0 
R E 1.0 
F E 1.0 
L E 1.0 
I E 1.0 
L C 0.7 
P C 1.0 
D C 1.0 
END 
