PFRMAT TS 
TARGET T0064 
AUTHOR 9098-1319-9502 
REMARK Enoch S. Huang and Jay W. Ponder 
METHOD 
METHOD Model of sin-r fragment (two helices of multimerization domain).  
METHOD The fragment was modeled from 1cos_C (first helix) and 1cos_B  
METHOD (second helix) after manual alignment. Side-chains were placed with  
METHOD the software SCWRL (Bower MJ, Cohen FE, Dunbrack RL, Jr.   
METHOD J Mol Biol 1997; 267:1268-82). 
METHOD 
MODEL 1 
PARENT 1cos_B 1cos_C 
ATOM      1  N   GLY A  72      -1.041 -25.483  24.450  1.00  0.00 
ATOM      2  CA  GLY A  72      -0.994 -24.060  24.827  1.00  0.00 
ATOM      3  C   GLY A  72       0.400 -23.472  24.815  1.00  0.00 
ATOM      4  O   GLY A  72       0.622 -22.301  24.477  1.00  0.00 
ATOM      5  N   GLN A  73       1.382 -24.247  25.203  1.00  0.00 
ATOM      6  CA  GLN A  73       2.757 -23.761  25.104  1.00  0.00 
ATOM      7  C   GLN A  73       3.289 -23.640  23.652  1.00  0.00 
ATOM      8  O   GLN A  73       3.986 -22.682  23.334  1.00  0.00 
ATOM      9  CB  GLN A  73       3.714 -24.704  25.837  1.00  0.00 
ATOM     10  CG  GLN A  73       3.570 -24.678  27.350  1.00  0.00 
ATOM     11  CD  GLN A  73       4.488 -25.669  28.038  1.00  0.00 
ATOM     12  OE1 GLN A  73       5.230 -26.401  27.384  1.00  0.00 
ATOM     13  NE2 GLN A  73       4.439 -25.696  29.366  1.00  0.00 
ATOM     14  N   LEU A  74       2.886 -24.571  22.741  1.00  0.00 
ATOM     15  CA  LEU A  74       3.233 -24.469  21.321  1.00  0.00 
ATOM     16  C   LEU A  74       2.543 -23.286  20.693  1.00  0.00 
ATOM     17  O   LEU A  74       3.097 -22.513  19.894  1.00  0.00 
ATOM     18  CB  LEU A  74       2.805 -25.733  20.573  1.00  0.00 
ATOM     19  CG  LEU A  74       3.660 -26.981  20.804  1.00  0.00 
ATOM     20  CD1 LEU A  74       3.063 -28.183  20.088  1.00  0.00 
ATOM     21  CD2 LEU A  74       5.073 -26.769  20.281  1.00  0.00 
ATOM     22  N   ASP A  75       1.267 -23.229  20.966  1.00  0.00 
ATOM     23  CA  ASP A  75       0.508 -22.110  20.487  1.00  0.00 
ATOM     24  C   ASP A  75       1.133 -20.760  20.840  1.00  0.00 
ATOM     25  O   ASP A  75       1.057 -19.835  20.031  1.00  0.00 
ATOM     26  CB  ASP A  75      -0.900 -22.122  21.087  1.00  0.00 
ATOM     27  CG  ASP A  75      -1.764 -23.233  20.524  1.00  0.00 
ATOM     28  OD1 ASP A  75      -3.005 -23.111  20.592  1.00  0.00 
ATOM     29  OD2 ASP A  75      -1.201 -24.224  20.016  1.00  0.00 
ATOM     30  N   SER A  76       1.861 -20.689  21.957  1.00  0.00 
ATOM     31  CA  SER A  76       2.453 -19.430  22.362  1.00  0.00 
ATOM     32  C   SER A  76       3.626 -19.128  21.520  1.00  0.00 
ATOM     33  O   SER A  76       4.024 -17.985  21.308  1.00  0.00 
ATOM     34  CB  SER A  76       2.903 -19.495  23.823  1.00  0.00 
ATOM     35  OG  SER A  76       1.805 -19.741  24.685  1.00  0.00 
ATOM     36  N   GLU A  77       4.276 -20.221  21.203  1.00  0.00 
ATOM     37  CA  GLU A  77       5.474 -20.162  20.439  1.00  0.00 
ATOM     38  C   GLU A  77       5.264 -19.819  18.987  1.00  0.00 
ATOM     39  O   GLU A  77       6.007 -18.974  18.489  1.00  0.00 
ATOM     40  CB  GLU A  77       6.193 -21.512  20.466  1.00  0.00 
ATOM     41  CG  GLU A  77       6.788 -21.872  21.817  1.00  0.00 
ATOM     42  CD  GLU A  77       7.434 -23.243  21.823  1.00  0.00 
ATOM     43  OE1 GLU A  77       7.394 -23.924  20.777  1.00  0.00 
ATOM     44  OE2 GLU A  77       7.982 -23.637  22.874  1.00  0.00 
ATOM     45  N   TRP A  78       4.186 -20.375  18.386  1.00  0.00 
ATOM     46  CA  TRP A  78       3.742 -20.036  17.018  1.00  0.00 
ATOM     47  C   TRP A  78       3.291 -18.570  16.915  1.00  0.00 
ATOM     48  O   TRP A  78       3.096 -18.095  15.820  1.00  0.00 
ATOM     49  CB  TRP A  78       2.564 -20.919  16.602  1.00  0.00 
ATOM     50  CG  TRP A  78       2.923 -22.365  16.449  1.00  0.00 
ATOM     51  CD1 TRP A  78       2.736 -23.359  17.365  1.00  0.00 
ATOM     52  CD2 TRP A  78       3.534 -22.981  15.307  1.00  0.00 
ATOM     53  NE1 TRP A  78       3.191 -24.556  16.867  1.00  0.00 
ATOM     54  CE2 TRP A  78       3.686 -24.351  15.604  1.00  0.00 
ATOM     55  CE3 TRP A  78       3.966 -22.510  14.064  1.00  0.00 
ATOM     56  CZ2 TRP A  78       4.251 -25.252  14.704  1.00  0.00 
ATOM     57  CZ3 TRP A  78       4.526 -23.407  13.174  1.00  0.00 
ATOM     58  CH2 TRP A  78       4.665 -24.762  13.495  1.00  0.00 
ATOM     59  N   GLU A  79       2.869 -17.988  18.053  1.00  0.00 
ATOM     60  CA  GLU A  79       2.405 -16.623  18.257  1.00  0.00 
ATOM     61  C   GLU A  79       3.626 -15.704  18.229  1.00  0.00 
ATOM     62  O   GLU A  79       3.646 -14.700  17.528  1.00  0.00 
ATOM     63  CB  GLU A  79       1.691 -16.495  19.604  1.00  0.00 
ATOM     64  CG  GLU A  79       1.040 -15.141  19.835  1.00  0.00 
ATOM     65  CD  GLU A  79       0.333 -15.055  21.173  1.00  0.00 
ATOM     66  OE1 GLU A  79       0.347 -16.058  21.917  1.00  0.00 
ATOM     67  OE2 GLU A  79      -0.236 -13.985  21.478  1.00  0.00 
ATOM     68  N   LYS A  80       4.655 -16.111  18.976  1.00  0.00 
ATOM     69  CA  LYS A  80       5.975 -15.478  19.077  1.00  0.00 
ATOM     70  C   LYS A  80       6.598 -15.219  17.714  1.00  0.00 
ATOM     71  O   LYS A  80       6.686 -14.079  17.313  1.00  0.00 
ATOM     72  CB  LYS A  80       6.939 -16.371  19.860  1.00  0.00 
ATOM     73  CG  LYS A  80       8.269 -15.713  20.188  1.00  0.00 
ATOM     74  CD  LYS A  80       9.165 -16.645  20.988  1.00  0.00 
ATOM     75  CE  LYS A  80      10.502 -15.992  21.299  1.00  0.00 
ATOM     76  NZ  LYS A  80      11.386 -16.890  22.093  1.00  0.00 
ATOM     77  N   LEU A  81       6.987 -16.298  17.014  1.00  0.00 
ATOM     78  CA  LEU A  81       7.484 -16.309  15.638  1.00  0.00 
ATOM     79  C   LEU A  81       6.630 -15.490  14.667  1.00  0.00 
ATOM     80  O   LEU A  81       7.168 -14.728  13.852  1.00  0.00 
ATOM     81  CB  LEU A  81       7.521 -17.738  15.094  1.00  0.00 
ATOM     82  CG  LEU A  81       8.183 -17.927  13.727  1.00  0.00 
ATOM     83  CD1 LEU A  81       9.656 -17.553  13.788  1.00  0.00 
ATOM     84  CD2 LEU A  81       8.079 -19.375  13.274  1.00  0.00 
ATOM     85  N   VAL A  82       5.301 -15.651  14.762  1.00  0.00 
ATOM     86  CA  VAL A  82       4.356 -14.887  13.949  1.00  0.00 
ATOM     87  C   VAL A  82       4.377 -13.399  14.269  1.00  0.00 
ATOM     88  O   VAL A  82       4.234 -12.535  13.412  1.00  0.00 
ATOM     89  CB  VAL A  82       2.908 -15.367  14.166  1.00  0.00 
ATOM     90  CG1 VAL A  82       1.929 -14.438  13.467  1.00  0.00 
ATOM     91  CG2 VAL A  82       2.723 -16.770  13.606  1.00  0.00 
ATOM     92  N   ARG A  83       4.695 -13.104  15.508  1.00  0.00 
ATOM     93  CA  ARG A  83       4.839 -11.738  15.879  1.00  0.00 
ATOM     94  C   ARG A  83       6.061 -11.164  15.154  1.00  0.00 
ATOM     95  O   ARG A  83       5.975 -10.089  14.544  1.00  0.00 
ATOM     96  CB  ARG A  83       5.037 -11.612  17.390  1.00  0.00 
ATOM     97  CG  ARG A  83       3.795 -11.922  18.208  1.00  0.00 
ATOM     98  CD  ARG A  83       4.059 -11.765  19.696  1.00  0.00 
ATOM     99  NE  ARG A  83       2.891 -12.120  20.499  1.00  0.00 
ATOM    100  CZ  ARG A  83       2.890 -12.190  21.827  1.00  0.00 
ATOM    101  NH1 ARG A  83       1.781 -12.520  22.472  1.00  0.00 
ATOM    102  NH2 ARG A  83       4.000 -11.930  22.504  1.00  0.00 
ATOM    103  N   ASP A  84       7.162 -11.944  15.110  1.00  0.00 
ATOM    104  CA  ASP A  84       8.402 -11.596  14.378  1.00  0.00 
ATOM    105  C   ASP A  84       8.289 -11.464  12.853  1.00  0.00 
ATOM    106  O   ASP A  84       8.829 -10.538  12.294  1.00  0.00 
ATOM    107  CB  ASP A  84       9.477 -12.659  14.608  1.00  0.00 
ATOM    108  CG  ASP A  84      10.049 -12.615  16.011  1.00  0.00 
ATOM    109  OD1 ASP A  84      11.053 -13.314  16.265  1.00  0.00 
ATOM    110  OD2 ASP A  84       9.494 -11.883  16.857  1.00  0.00 
ATOM    111  N   ALA A  85       7.642 -12.390  12.150  1.00  0.00 
ATOM    112  CA  ALA A  85       7.617 -12.280  10.704  1.00  0.00 
ATOM    113  C   ALA A  85       6.982 -10.996  10.241  1.00  0.00 
ATOM    114  O   ALA A  85       7.636 -10.150   9.627  1.00  0.00 
ATOM    115  CB  ALA A  85       6.825 -13.429  10.099  1.00  0.00 
ATOM    116  N   MET A  86       5.679 -10.889  10.497  1.00  0.00 
ATOM    117  CA  MET A  86       4.905  -9.733  10.097  1.00  0.00 
ATOM    118  C   MET A  86       5.502  -8.386  10.597  1.00  0.00 
ATOM    119  O   MET A  86       5.081  -7.313  10.187  1.00  0.00 
ATOM    120  CB  MET A  86       3.482  -9.821  10.653  1.00  0.00 
ATOM    121  CG  MET A  86       2.625 -10.891   9.996  1.00  0.00 
ATOM    122  SD  MET A  86       2.382 -10.602   8.233  1.00  0.00 
ATOM    123  CE  MET A  86       1.313  -9.165   8.269  1.00  0.00 
ATOM    124  N   THR A  87       6.550  -8.439  11.449  1.00  0.00 
ATOM    125  CA  THR A  87       7.322  -7.249  11.815  1.00  0.00 
ATOM    126  C   THR A  87       8.469  -6.987  10.793  1.00  0.00 
ATOM    127  O   THR A  87       8.825  -5.857  10.445  1.00  0.00 
ATOM    128  CB  THR A  87       7.966  -7.401  13.206  1.00  0.00 
ATOM    129  OG1 THR A  87       6.950  -7.672  14.178  1.00  0.00 
ATOM    130  CG2 THR A  87       8.693  -6.124  13.598  1.00  0.00 
ATOM    154  N   LYS A  92      17.086 -15.262   8.574  1.00  0.00 
ATOM    155  CA  LYS A  92      16.119 -16.225   7.983  1.00  0.00 
ATOM    156  C   LYS A  92      16.335 -17.639   8.543  1.00  0.00 
ATOM    157  O   LYS A  92      15.431 -18.404   8.936  1.00  0.00 
ATOM    158  CB  LYS A  92      16.284 -16.285   6.463  1.00  0.00 
ATOM    159  CG  LYS A  92      15.770 -15.054   5.735  1.00  0.00 
ATOM    160  CD  LYS A  92      15.964 -15.181   4.233  1.00  0.00 
ATOM    161  CE  LYS A  92      15.462 -13.944   3.505  1.00  0.00 
ATOM    162  NZ  LYS A  92      15.679 -14.040   2.034  1.00  0.00 
ATOM    163  N   LYS A  93      17.612 -17.964   8.627  1.00  0.00 
ATOM    164  CA  LYS A  93      18.051 -19.247   9.163  1.00  0.00 
ATOM    165  C   LYS A  93      17.639 -19.501  10.585  1.00  0.00 
ATOM    166  O   LYS A  93      17.152 -20.575  10.898  1.00  0.00 
ATOM    167  CB  LYS A  93      19.577 -19.346   9.133  1.00  0.00 
ATOM    168  CG  LYS A  93      20.121 -20.695   9.575  1.00  0.00 
ATOM    169  CD  LYS A  93      21.639 -20.732   9.495  1.00  0.00 
ATOM    170  CE  LYS A  93      22.183 -22.074   9.956  1.00  0.00 
ATOM    171  NZ  LYS A  93      23.669 -22.130   9.872  1.00  0.00 
ATOM    172  N   GLN A  94      17.840 -18.487  11.433  1.00  0.00 
ATOM    173  CA  GLN A  94      17.324 -18.517  12.815  1.00  0.00 
ATOM    174  C   GLN A  94      15.825 -18.793  12.832  1.00  0.00 
ATOM    175  O   GLN A  94      15.381 -19.664  13.537  1.00  0.00 
ATOM    176  CB  GLN A  94      17.571 -17.176  13.508  1.00  0.00 
ATOM    177  CG  GLN A  94      17.161 -17.149  14.971  1.00  0.00 
ATOM    178  CD  GLN A  94      17.453 -15.816  15.634  1.00  0.00 
ATOM    179  OE1 GLN A  94      17.998 -14.907  15.008  1.00  0.00 
ATOM    180  NE2 GLN A  94      17.091 -15.697  16.906  1.00  0.00 
ATOM    181  N   PHE A  95      15.018 -18.058  12.062  1.00  0.00 
ATOM    182  CA  PHE A  95      13.582 -18.305  12.034  1.00  0.00 
ATOM    183  C   PHE A  95      13.326 -19.699  11.516  1.00  0.00 
ATOM    184  O   PHE A  95      12.307 -20.298  11.824  1.00  0.00 
ATOM    185  CB  PHE A  95      12.883 -17.297  11.121  1.00  0.00 
ATOM    186  CG  PHE A  95      12.805 -15.911  11.693  1.00  0.00 
ATOM    187  CD1 PHE A  95      13.726 -14.943  11.330  1.00  0.00 
ATOM    188  CD2 PHE A  95      11.813 -15.573  12.598  1.00  0.00 
ATOM    189  CE1 PHE A  95      13.655 -13.667  11.857  1.00  0.00 
ATOM    190  CE2 PHE A  95      11.743 -14.298  13.125  1.00  0.00 
ATOM    191  CZ  PHE A  95      12.658 -13.347  12.759  1.00  0.00 
ATOM    192  N   ARG A  96      14.189 -20.137  10.600  1.00  0.00 
ATOM    193  CA  ARG A  96      14.042 -21.434   9.943  1.00  0.00 
ATOM    194  C   ARG A  96      14.244 -22.625  10.898  1.00  0.00 
ATOM    195  O   ARG A  96      13.401 -23.561  10.995  1.00  0.00 
ATOM    196  CB  ARG A  96      15.068 -21.584   8.818  1.00  0.00 
ATOM    197  CG  ARG A  96      14.916 -22.859   8.005  1.00  0.00 
ATOM    198  CD  ARG A  96      15.939 -22.925   6.883  1.00  0.00 
ATOM    199  NE  ARG A  96      15.829 -24.161   6.112  1.00  0.00 
ATOM    200  CZ  ARG A  96      16.640 -24.493   5.113  1.00  0.00 
ATOM    201  NH1 ARG A  96      16.463 -25.639   4.470  1.00  0.00 
ATOM    202  NH2 ARG A  96      17.625 -23.679   4.760  1.00  0.00 
ATOM    203  N   GLU A  97      15.333 -22.526  11.673  1.00  0.00 
ATOM    204  CA  GLU A  97      15.608 -23.501  12.721  1.00  0.00 
ATOM    205  C   GLU A  97      14.427 -23.607  13.709  1.00  0.00 
ATOM    206  O   GLU A  97      13.874 -24.685  13.921  1.00  0.00 
ATOM    207  CB  GLU A  97      16.854 -23.098  13.514  1.00  0.00 
ATOM    208  CG  GLU A  97      17.296 -24.128  14.541  1.00  0.00 
ATOM    209  CD  GLU A  97      18.538 -23.701  15.297  1.00  0.00 
ATOM    210  OE1 GLU A  97      19.057 -22.601  15.013  1.00  0.00 
ATOM    211  OE2 GLU A  97      18.992 -24.466  16.173  1.00  0.00 
ATOM    212  N   PHE A  98      13.978 -22.438  14.214  1.00  0.00 
ATOM    213  CA  PHE A  98      12.909 -22.254  15.184  1.00  0.00 
ATOM    214  C   PHE A  98      11.639 -22.935  14.720  1.00  0.00 
ATOM    215  O   PHE A  98      11.085 -23.767  15.427  1.00  0.00 
ATOM    216  CB  PHE A  98      12.612 -20.765  15.377  1.00  0.00 
ATOM    217  CG  PHE A  98      11.499 -20.490  16.348  1.00  0.00 
ATOM    218  CD1 PHE A  98      11.712 -20.584  17.712  1.00  0.00 
ATOM    219  CD2 PHE A  98      10.240 -20.138  15.897  1.00  0.00 
ATOM    220  CE1 PHE A  98      10.687 -20.332  18.605  1.00  0.00 
ATOM    221  CE2 PHE A  98       9.215 -19.886  16.790  1.00  0.00 
ATOM    222  CZ  PHE A  98       9.436 -19.981  18.138  1.00  0.00 
ATOM    223  N   LEU A  99      11.205 -22.624  13.493  1.00  0.00 
ATOM    224  CA  LEU A  99      10.065 -23.300  12.842  1.00  0.00 
ATOM    225  C   LEU A  99      10.223 -24.812  12.752  1.00  0.00 
ATOM    226  O   LEU A  99       9.280 -25.551  12.920  1.00  0.00 
ATOM    227  CB  LEU A  99       9.885 -22.788  11.412  1.00  0.00 
ATOM    228  CG  LEU A  99       8.666 -23.314  10.652  1.00  0.00 
ATOM    229  CD1 LEU A  99       7.378 -22.873  11.330  1.00  0.00 
ATOM    230  CD2 LEU A  99       8.656 -22.791   9.224  1.00  0.00 
ATOM    231  N   ASP A 100      11.375 -25.272  12.339  1.00  0.00 
ATOM    232  CA  ASP A 100      11.616 -26.700  12.309  1.00  0.00 
ATOM    233  C   ASP A 100      11.516 -27.357  13.714  1.00  0.00 
ATOM    234  O   ASP A 100      10.992 -28.475  13.851  1.00  0.00 
ATOM    235  CB  ASP A 100      13.016 -26.996  11.768  1.00  0.00 
ATOM    236  CG  ASP A 100      13.229 -28.468  11.479  1.00  0.00 
ATOM    237  OD1 ASP A 100      13.957 -28.785  10.515  1.00  0.00 
ATOM    238  OD2 ASP A 100      12.668 -29.307  12.215  1.00  0.00 
TER 
END 
