PFRMAT AL 
TARGET T0067 
AUTHOR 6795-8227-6214 
REMARK CASP3 Prediction by Michael Bass on 8/20/98 
METHOD AmgenThread.  Gapped alignments with no end penalties. 
METHOD Uses residue-based statistical potentials.  Specific 
METHOD potentials include exposed surface area, inter-residue 
METHOD distance-dependent contacts, and backbone dihedral 
METHOD angle preferences.  The search database is against the 
METHOD Hobohm PDB-SELECT list, Oct 97, at the 45% identity or 
METHOD less level containing 1,247 structures. 
METHOD This is an automatic prediction method. 
REMARK Results from database search: 
REMARK Sequence "t0067" has a possible match 
REMARK pdb1ncx       4.878     0.172     6.879  MOLECULE: TROPONIN C; 
REMARK                                          SCOP: Alpha; EF-hand 
REMARK pdb1ofv       4.485     0.162    -4.780  FLAVODOXIN (OXIDIZED FORM) 
REMARK                                          SCOP: A/B; Flavodoxin-like 
REMARK pdb1jcv       4.124     0.152    -0.393  MOLECULE: CU/ZN SUPEROXIDE DISMUTASE; 
REMARK                                          SCOP: Beta; Immunoglobulin-like beta-sandwich 
REMARK pdb2bb2       3.971     0.148     8.245  BETA-B2-CRYSTALLIN 
REMARK pdb1ukz       3.798     0.144   -18.227  URIDYLATE KINASE (E.C.2.7.4.-) COMPLEXED WITH ADP AND AMP 
REMARK                                          SCOP: A/B; P-loop containing nucleotide triphosphate hydrolases 
REMARK pdb1amm       3.563     0.137    -4.094  MOLECULE: GAMMA B-CRYSTALLIN; 
REMARK                                          SCOP: 1-85: Beta; Crystallins/protein S 
REMARK                                          SCOP: 86-174: Beta; Crystallins/protein S 
REMARK pdb1nfn       3.530     0.136    -5.111  MOLECULE: APOLIPOPROTEIN E3; 
REMARK                                          SCOP: Alpha; Four-helical up-and-down bundle 
REMARK pdb1isc_A     3.467     0.135     4.435  IRON(III) SUPEROXIDE DISMUTASE (E.C.1.15.1.1) COMPLEXED 
REMARK                                          SCOP: 1-82: Alpha; Long alpha-hairpin 
REMARK                                          SCOP: 83-192: A+B; Fe,Mn superoxide dismutase (SOD), C-terminal domain 
REMARK pdb1ad2       3.402     0.133    -4.579  MOLECULE: RIBOSOMAL PROTEIN L1; 
REMARK                                          SCOP: Multi; Ribosomal protein L1 
REMARK pdb1erw       3.276     0.130     6.600  MOLECULE: THIOREDOXIN; 
MODEL  1 
PARENT NONE 
TER 
END 
