REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0068AL215_1_1 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : ZHU-JUN 
REMARK  ---------------------------------------------------------- 
TARGET     T0068  
AUTHOR     4070-8855-4894  
METHOD     The target is compared with PDB25 database (U.Hobohm et al., 1992).  
METHOD     For each structure in PDB25, a model is built in the following way:  
METHOD     the sequence (query) is compared with NR database using transitive   
METHOD     BLAST (Neuwald et al. 1997). Similar sequences are collected and   
METHOD     purged at score 150.  Those sequences are aligned with query   
METHOD     sequence using Bayesian aligner (Zhu et al., 1998) and a   
METHOD     profile-like model is built (Lawrence et al. 1993; Gribskov et al.,  
METHOD     1987; unpublished result by Jun Zhu, Roland Luthy and Charlse E.   
METHOD     Lawrence).  Then, the target file is compared with the models   
METHOD     derived from PDB25.  
MODEL     1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1rmg 
ATOM      1  N   ALA    20       2.466  88.029 111.520  1.00  0.00              
ATOM      2  CA  ALA    20       1.846  88.889 112.518  1.00  0.00              
ATOM      3  C   ALA    20       2.614  88.936 113.815  1.00  0.00              
ATOM      4  O   ALA    20       2.092  89.410 114.820  1.00  0.00              
ATOM      5  N   ASP    21       3.835  88.403 113.809  1.00  0.00              
ATOM      6  CA  ASP    21       4.677  88.370 115.007  1.00  0.00              
ATOM      7  C   ASP    21       3.884  87.792 116.201  1.00  0.00              
ATOM      8  O   ASP    21       4.049  88.211 117.354  1.00  0.00              
ATOM      9  N   SER    22       3.096  86.751 115.936  1.00  0.00              
ATOM     10  CA  SER    22       2.245  86.170 116.981  1.00  0.00              
ATOM     11  C   SER    22       1.909  84.691 116.710  1.00  0.00              
ATOM     12  O   SER    22       2.009  83.844 117.597  1.00  0.00              
ATOM     13  N   SER    23       1.483  84.398 115.491  1.00  0.00              
ATOM     14  CA  SER    23       1.127  83.037 115.075  1.00  0.00              
ATOM     15  C   SER    23       2.407  82.200 114.846  1.00  0.00              
ATOM     16  O   SER    23       3.268  82.581 114.041  1.00  0.00              
ATOM     17  N   THR    24       2.525  81.084 115.564  1.00  0.00              
ATOM     18  CA  THR    24       3.677  80.176 115.476  1.00  0.00              
ATOM     19  C   THR    24       4.017  79.820 114.031  1.00  0.00              
ATOM     20  O   THR    24       3.201  79.246 113.314  1.00  0.00              
ATOM     21  N   ALA    25       5.218  80.176 113.599  1.00  0.00              
ATOM     22  CA  ALA    25       5.639  79.909 112.233  1.00  0.00              
ATOM     23  C   ALA    25       6.274  78.520 112.117  1.00  0.00              
ATOM     24  O   ALA    25       6.454  78.001 111.011  1.00  0.00              
ATOM     25  N   THR    26       6.542  77.889 113.257  1.00  0.00              
ATOM     26  CA  THR    26       7.162  76.560 113.249  1.00  0.00              
ATOM     27  C   THR    26       6.520  75.548 112.310  1.00  0.00              
ATOM     28  O   THR    26       7.172  75.011 111.407  1.00  0.00              
ATOM     29  N   SER    27       5.217  75.280 112.483  1.00  0.00              
ATOM     30  CA  SER    27       4.458  74.331 111.660  1.00  0.00              
ATOM     31  C   SER    27       4.541  74.591 110.163  1.00  0.00              
ATOM     32  O   SER    27       4.708  73.651 109.375  1.00  0.00              
ATOM     33  N   THR    28       4.454  75.865 109.769  1.00  0.00              
ATOM     34  CA  THR    28       4.531  76.259 108.363  1.00  0.00              
ATOM     35  C   THR    28       5.876  75.892 107.764  1.00  0.00              
ATOM     36  O   THR    28       5.951  75.414 106.635  1.00  0.00              
ATOM     37  N   ILE    29       6.951  76.206 108.481  1.00  0.00              
ATOM     38  CA  ILE    29       8.292  75.874 108.011  1.00  0.00              
ATOM     39  C   ILE    29       8.372  74.354 107.848  1.00  0.00              
ATOM     40  O   ILE    29       8.882  73.861 106.840  1.00  0.00              
ATOM     41  N   GLN    30       7.836  73.612 108.815  1.00  0.00              
ATOM     42  CA  GLN    30       7.851  72.144 108.725  1.00  0.00              
ATOM     43  C   GLN    30       7.080  71.605 107.512  1.00  0.00              
ATOM     44  O   GLN    30       7.555  70.688 106.833  1.00  0.00              
ATOM     45  N   LYS    31       5.892  72.154 107.245  1.00  0.00              
ATOM     46  CA  LYS    31       5.108  71.730 106.079  1.00  0.00              
ATOM     47  C   LYS    31       5.782  72.158 104.777  1.00  0.00              
ATOM     48  O   LYS    31       5.723  71.441 103.778  1.00  0.00              
ATOM     49  N   ALA    32       6.409  73.331 104.777  1.00  0.00              
ATOM     50  CA  ALA    32       7.090  73.806 103.580  1.00  0.00              
ATOM     51  C   ALA    32       8.290  72.899 103.306  1.00  0.00              
ATOM     52  O   ALA    32       8.579  72.574 102.159  1.00  0.00              
ATOM     53  N   LEU    33       8.988  72.488 104.364  1.00  0.00              
ATOM     54  CA  LEU    33      10.150  71.614 104.216  1.00  0.00              
ATOM     55  C   LEU    33       9.728  70.281 103.633  1.00  0.00              
ATOM     56  O   LEU    33      10.340  69.803 102.680  1.00  0.00              
ATOM     57  N   ASN    34       8.674  69.694 104.195  1.00  0.00              
ATOM     58  CA  ASN    34       8.160  68.409 103.717  1.00  0.00              
ATOM     59  C   ASN    34       7.900  68.414 102.200  1.00  0.00              
ATOM     60  O   ASN    34       8.217  67.437 101.496  1.00  0.00              
ATOM     61  N   ASN    35       7.392  69.538 101.690  1.00  0.00              
ATOM     62  CA  ASN    35       7.087  69.672 100.263  1.00  0.00              
ATOM     63  C   ASN    35       8.289  70.020  99.394  1.00  0.00              
ATOM     64  O   ASN    35       8.363  69.603  98.237  1.00  0.00              
ATOM     65  N   CYS    36       9.246  70.751  99.957  1.00  0.00              
ATOM     66  CA  CYS    36      10.425  71.181  99.202  1.00  0.00              
ATOM     67  C   CYS    36      11.782  70.532  99.537  1.00  0.00              
ATOM     68  O   CYS    36      12.764  70.803  98.862  1.00  0.00              
ATOM     69  N   ASP    37      11.828  69.661 100.537  1.00  0.00              
ATOM     70  CA  ASP    37      13.077  69.028 100.957  1.00  0.00              
ATOM     71  C   ASP    37      13.852  68.260  99.885  1.00  0.00              
ATOM     72  O   ASP    37      15.033  67.968 100.070  1.00  0.00              
ATOM     73  N   GLN    38      13.211  67.920  98.773  1.00  0.00              
ATOM     74  CA  GLN    38      13.923  67.214  97.717  1.00  0.00              
ATOM     75  C   GLN    38      13.933  68.065  96.459  1.00  0.00              
ATOM     76  O   GLN    38      12.991  68.024  95.672  1.00  0.00              
ATOM     77  N   GLY    39      14.976  68.867  96.289  1.00  0.00              
ATOM     78  CA  GLY    39      15.086  69.706  95.111  1.00  0.00              
ATOM     79  C   GLY    39      14.456  71.094  95.134  1.00  0.00              
ATOM     80  O   GLY    39      14.717  71.875  94.216  1.00  0.00              
ATOM     81  N   LYS    40      13.694  71.435  96.169  1.00  0.00              
ATOM     82  CA  LYS    40      13.048  72.742  96.202  1.00  0.00              
ATOM     83  C   LYS    40      13.655  73.793  97.116  1.00  0.00              
ATOM     84  O   LYS    40      14.704  73.584  97.720  1.00  0.00              
ATOM     85  N   ALA    41      12.961  74.910  97.274  1.00  0.00              
ATOM     86  CA  ALA    41      13.453  75.987  98.109  1.00  0.00              
ATOM     87  C   ALA    41      12.372  76.472  99.061  1.00  0.00              
ATOM     88  O   ALA    41      11.282  76.830  98.620  1.00  0.00              
ATOM     89  N   VAL    42      12.660  76.459 100.360  1.00  0.00              
ATOM     90  CA  VAL    42      11.719  76.947 101.362  1.00  0.00              
ATOM     91  C   VAL    42      11.978  78.449 101.460  1.00  0.00              
ATOM     92  O   VAL    42      13.094  78.885 101.751  1.00  0.00              
ATOM     93  N   ARG    43      10.929  79.230 101.244  1.00  0.00              
ATOM     94  CA  ARG    43      11.047  80.666 101.218  1.00  0.00              
ATOM     95  C   ARG    43      10.266  81.340 102.320  1.00  0.00              
ATOM     96  O   ARG    43       9.076  81.079 102.509  1.00  0.00              
ATOM     97  N   LEU    44      10.963  82.198 103.056  1.00  0.00              
ATOM     98  CA  LEU    44      10.396  82.953 104.163  1.00  0.00              
ATOM     99  C   LEU    44      10.492  84.432 103.786  1.00  0.00              
ATOM    100  O   LEU    44      11.564  85.038 103.890  1.00  0.00              
ATOM    101  N   SER    45       9.387  85.016 103.288  1.00  0.00              
ATOM    102  CA  SER    45       9.355  86.428 102.885  1.00  0.00              
ATOM    103  C   SER    45       9.538  87.378 104.057  1.00  0.00              
ATOM    104  O   SER    45       9.349  87.005 105.218  1.00  0.00              
ATOM    105  N   ALA    46       9.902  88.617 103.737  1.00  0.00              
ATOM    106  CA  ALA    46      10.107  89.663 104.728  1.00  0.00              
ATOM    107  C   ALA    46       8.874  89.851 105.619  1.00  0.00              
ATOM    108  O   ALA    46       7.744  89.856 105.133  1.00  0.00              
ATOM    109  N   GLY    47       9.100  90.011 106.918  1.00  0.00              
ATOM    110  CA  GLY    47       8.017  90.170 107.872  1.00  0.00              
ATOM    111  C   GLY    47       8.500  89.710 109.230  1.00  0.00              
ATOM    112  O   GLY    47       9.645  89.294 109.372  1.00  0.00              
ATOM    113  N   SER    48       7.642  89.784 110.235  1.00  0.00              
ATOM    114  CA  SER    48       7.986  89.369 111.587  1.00  0.00              
ATOM    115  C   SER    48       7.200  88.120 111.948  1.00  0.00              
ATOM    116  O   SER    48       5.974  88.090 111.847  1.00  0.00              
ATOM    117  N   THR    49       7.916  87.088 112.367  1.00  0.00              
ATOM    118  CA  THR    49       7.298  85.817 112.710  1.00  0.00              
ATOM    119  C   THR    49       7.700  85.379 114.089  1.00  0.00              
ATOM    120  O   THR    49       8.824  85.617 114.537  1.00  0.00              
ATOM    121  N   SER    50       6.762  84.742 114.766  1.00  0.00              
ATOM    122  CA  SER    50       6.990  84.228 116.095  1.00  0.00              
ATOM    123  C   SER    50       7.260  82.738 115.948  1.00  0.00              
ATOM    124  O   SER    50       6.568  82.053 115.194  1.00  0.00              
ATOM    125  N   VAL    51       8.294  82.250 116.626  1.00  0.00              
ATOM    126  CA  VAL    51       8.631  80.835 116.599  1.00  0.00              
ATOM    127  C   VAL    51       8.302  80.319 117.991  1.00  0.00              
ATOM    128  O   VAL    51       9.004  80.630 118.963  1.00  0.00              
ATOM    129  N   PHE    52       7.199  79.583 118.091  1.00  0.00              
ATOM    130  CA  PHE    52       6.753  79.049 119.375  1.00  0.00              
ATOM    131  C   PHE    52       7.136  77.587 119.601  1.00  0.00              
ATOM    132  O   PHE    52       7.293  77.152 120.737  1.00  0.00              
ATOM    133  N   LEU    53       7.286  76.829 118.524  1.00  0.00              
ATOM    134  CA  LEU    53       7.687  75.427 118.638  1.00  0.00              
ATOM    135  C   LEU    53       8.877  75.236 117.712  1.00  0.00              
ATOM    136  O   LEU    53       8.920  75.816 116.612  1.00  0.00              
ATOM    137  N   SER    54       9.874  74.496 118.191  1.00  0.00              
ATOM    138  CA  SER    54      11.101  74.259 117.435  1.00  0.00              
ATOM    139  C   SER    54      10.884  73.418 116.190  1.00  0.00              
ATOM    140  O   SER    54       9.914  72.669 116.111  1.00  0.00              
ATOM    141  N   GLY    55      11.748  73.586 115.191  1.00  0.00              
ATOM    142  CA  GLY    55      11.637  72.809 113.965  1.00  0.00              
ATOM    143  C   GLY    55      12.878  71.937 113.822  1.00  0.00              
ATOM    144  O   GLY    55      13.989  72.335 114.213  1.00  0.00              
ATOM    145  N   PRO    56      12.669  70.730 113.311  1.00  0.00              
ATOM    146  CA  PRO    56      13.734  69.774 113.071  1.00  0.00              
ATOM    147  C   PRO    56      13.534  69.352 111.636  1.00  0.00              
ATOM    148  O   PRO    56      12.606  68.624 111.332  1.00  0.00              
ATOM    149  N   LEU    57      14.388  69.844 110.749  1.00  0.00              
ATOM    150  CA  LEU    57      14.292  69.563 109.332  1.00  0.00              
ATOM    151  C   LEU    57      15.328  68.512 108.962  1.00  0.00              
ATOM    152  O   LEU    57      16.526  68.755 109.057  1.00  0.00              
ATOM    153  N   SER    58      14.867  67.364 108.478  1.00  0.00              
ATOM    154  CA  SER    58      15.765  66.269 108.173  1.00  0.00              
ATOM    155  C   SER    58      15.507  65.643 106.821  1.00  0.00              
ATOM    156  O   SER    58      14.471  65.887 106.202  1.00  0.00              
ATOM    157  N   LEU    59      16.494  64.897 106.336  1.00  0.00              
ATOM    158  CA  LEU    59      16.366  64.204 105.069  1.00  0.00              
ATOM    159  C   LEU    59      16.265  65.020 103.797  1.00  0.00              
ATOM    160  O   LEU    59      15.672  64.559 102.804  1.00  0.00              
ATOM    161  N   PRO    60      16.862  66.208 103.789  1.00  0.00              
ATOM    162  CA  PRO    60      16.792  67.025 102.601  1.00  0.00              
ATOM    163  C   PRO    60      17.818  66.622 101.570  1.00  0.00              
ATOM    164  O   PRO    60      18.857  66.057 101.890  1.00  0.00              
ATOM    165  N   SER    61      17.567  66.976 100.327  1.00  0.00              
ATOM    166  CA  SER    61      18.490  66.659  99.275  1.00  0.00              
ATOM    167  C   SER    61      18.308  67.748  98.238  1.00  0.00              
ATOM    168  O   SER    61      17.208  67.926  97.740  1.00  0.00              
ATOM    169  N   GLY    62      19.365  68.503  97.948  1.00  0.00              
ATOM    170  CA  GLY    62      19.306  69.599  96.969  1.00  0.00              
ATOM    171  C   GLY    62      18.197  70.582  97.324  1.00  0.00              
ATOM    172  O   GLY    62      17.339  70.882  96.491  1.00  0.00              
ATOM    173  N   VAL    63      18.256  71.107  98.543  1.00  0.00              
ATOM    174  CA  VAL    63      17.253  72.019  99.059  1.00  0.00              
ATOM    175  C   VAL    63      17.905  73.289  99.648  1.00  0.00              
ATOM    176  O   VAL    63      19.138  73.376  99.752  1.00  0.00              
ATOM    177  N   SER    64      17.091  74.286  99.987  1.00  0.00              
ATOM    178  CA  SER    64      17.592  75.546 100.533  1.00  0.00              
ATOM    179  C   SER    64      16.520  76.261 101.322  1.00  0.00              
ATOM    180  O   SER    64      15.333  75.973 101.183  1.00  0.00              
ATOM    181  N   LEU    65      16.942  77.146 102.212  1.00  0.00              
ATOM    182  CA  LEU    65      16.004  77.915 103.009  1.00  0.00              
ATOM    183  C   LEU    65      16.420  79.361 102.854  1.00  0.00              
ATOM    184  O   LEU    65      17.561  79.719 103.157  1.00  0.00              
ATOM    185  N   LEU    66      15.507  80.164 102.329  1.00  0.00              
ATOM    186  CA  LEU    66      15.739  81.576 102.134  1.00  0.00              
ATOM    187  C   LEU    66      15.002  82.331 103.237  1.00  0.00              
ATOM    188  O   LEU    66      13.766  82.385 103.248  1.00  0.00              
ATOM    189  N   ILE    67      15.762  82.816 104.215  1.00  0.00              
ATOM    190  CA  ILE    67      15.215  83.560 105.339  1.00  0.00              
ATOM    191  C   ILE    67      15.336  85.072 105.081  1.00  0.00              
ATOM    192  O   ILE    67      16.397  85.674 105.312  1.00  0.00              
ATOM    193  N   ASP    68      14.254  85.674 104.587  1.00  0.00              
ATOM    194  CA  ASP    68      14.230  87.107 104.303  1.00  0.00              
ATOM    195  C   ASP    68      13.453  87.943 105.310  1.00  0.00              
ATOM    196  O   ASP    68      13.269  89.134 105.110  1.00  0.00              
ATOM    197  N   LYS    69      13.014  87.307 106.392  1.00  0.00              
ATOM    198  CA  LYS    69      12.273  87.991 107.434  1.00  0.00              
ATOM    199  C   LYS    69      13.002  87.789 108.740  1.00  0.00              
ATOM    200  O   LYS    69      14.124  87.277 108.732  1.00  0.00              
END
