REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0068AL215_1_3 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : ZHU-JUN 
REMARK  ---------------------------------------------------------- 
TARGET     T0068  
AUTHOR     4070-8855-4894  
METHOD     The target is compared with PDB25 database (U.Hobohm et al., 1992).  
METHOD     For each structure in PDB25, a model is built in the following way:  
METHOD     the sequence (query) is compared with NR database using transitive   
METHOD     BLAST (Neuwald et al. 1997). Similar sequences are collected and   
METHOD     purged at score 150.  Those sequences are aligned with query   
METHOD     sequence using Bayesian aligner (Zhu et al., 1998) and a   
METHOD     profile-like model is built (Lawrence et al. 1993; Gribskov et al.,  
METHOD     1987; unpublished result by Jun Zhu, Roland Luthy and Charlse E.   
METHOD     Lawrence).  Then, the target file is compared with the models   
METHOD     derived from PDB25.  
MODEL     1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1rmg 
ATOM      1  N   TRP   135      17.159  87.402 110.020  1.00  0.00              
ATOM      2  CA  TRP   135      17.713  87.254 111.353  1.00  0.00              
ATOM      3  C   TRP   135      16.844  86.414 112.236  1.00  0.00              
ATOM      4  O   TRP   135      15.661  86.227 111.964  1.00  0.00              
ATOM      5  N   GLU   136      17.442  85.942 113.319  1.00  0.00              
ATOM      6  CA  GLU   136      16.725  85.201 114.328  1.00  0.00              
ATOM      7  C   GLU   136      17.043  85.949 115.615  1.00  0.00              
ATOM      8  O   GLU   136      18.217  86.136 115.954  1.00  0.00              
ATOM      9  N   LEU   137      16.000  86.467 116.263  1.00  0.00              
ATOM     10  CA  LEU   137      16.119  87.187 117.530  1.00  0.00              
ATOM     11  C   LEU   137      15.751  86.174 118.611  1.00  0.00              
ATOM     12  O   LEU   137      14.569  85.910 118.846  1.00  0.00              
ATOM     13  N   ALA   138      16.762  85.639 119.287  1.00  0.00              
ATOM     14  CA  ALA   138      16.538  84.628 120.307  1.00  0.00              
ATOM     15  C   ALA   138      16.041  85.053 121.672  1.00  0.00              
ATOM     16  O   ALA   138      15.653  84.198 122.469  1.00  0.00              
ATOM     17  N   ALA   139      16.107  86.345 121.980  1.00  0.00              
ATOM     18  CA  ALA   139      15.650  86.849 123.271  1.00  0.00              
ATOM     19  C   ALA   139      16.223  86.063 124.453  1.00  0.00              
ATOM     20  O   ALA   139      15.548  85.834 125.476  1.00  0.00              
ATOM     21  N   ASP   140      17.499  85.712 124.334  1.00  0.00              
ATOM     22  CA  ASP   140      18.162  84.979 125.389  1.00  0.00              
ATOM     23  C   ASP   140      18.216  85.716 126.704  1.00  0.00              
ATOM     24  O   ASP   140      18.261  85.089 127.752  1.00  0.00              
ATOM     25  N   ALA   141      18.155  87.040 126.682  1.00  0.00              
ATOM     26  CA  ALA   141      18.255  87.795 127.921  1.00  0.00              
ATOM     27  C   ALA   141      17.158  87.441 128.923  1.00  0.00              
ATOM     28  O   ALA   141      17.363  87.531 130.140  1.00  0.00              
ATOM     29  N   LYS   142      16.002  87.011 128.432  1.00  0.00              
ATOM     30  CA  LYS   142      14.923  86.653 129.356  1.00  0.00              
ATOM     31  C   LYS   142      15.410  85.568 130.336  1.00  0.00              
ATOM     32  O   LYS   142      15.088  85.596 131.515  1.00  0.00              
ATOM     33  N   VAL   143      16.242  84.658 129.840  1.00  0.00              
ATOM     34  CA  VAL   143      16.807  83.582 130.647  1.00  0.00              
ATOM     35  C   VAL   143      17.998  84.039 131.477  1.00  0.00              
ATOM     36  O   VAL   143      18.122  83.691 132.659  1.00  0.00              
ATOM     37  N   LYS   144      18.887  84.793 130.835  1.00  0.00              
ATOM     38  CA  LYS   144      20.103  85.271 131.468  1.00  0.00              
ATOM     39  C   LYS   144      19.832  86.188 132.642  1.00  0.00              
ATOM     40  O   LYS   144      20.554  86.135 133.627  1.00  0.00              
ATOM     41  N   LYS   145      18.782  87.006 132.552  1.00  0.00              
ATOM     42  CA  LYS   145      18.406  87.887 133.650  1.00  0.00              
ATOM     43  C   LYS   145      18.096  87.034 134.900  1.00  0.00              
ATOM     44  O   LYS   145      18.322  87.470 136.028  1.00  0.00              
ATOM     45  N   LEU   146      17.649  85.791 134.693  1.00  0.00              
ATOM     46  CA  LEU   146      17.324  84.881 135.796  1.00  0.00              
ATOM     47  C   LEU   146      18.410  83.860 136.143  1.00  0.00              
ATOM     48  O   LEU   146      18.156  82.925 136.893  1.00  0.00              
ATOM     49  N   LYS   147      19.590  83.989 135.557  1.00  0.00              
ATOM     50  CA  LYS   147      20.663  83.059 135.863  1.00  0.00              
ATOM     51  C   LYS   147      20.550  81.699 135.204  1.00  0.00              
ATOM     52  O   LYS   147      21.217  80.761 135.640  1.00  0.00              
ATOM     53  N   GLN   148      19.766  81.595 134.131  1.00  0.00              
ATOM     54  CA  GLN   148      19.582  80.319 133.435  1.00  0.00              
ATOM     55  C   GLN   148      19.899  80.393 131.937  1.00  0.00              
ATOM     56  O   GLN   148      20.307  81.436 131.430  1.00  0.00              
ATOM     57  N   ASN   149      19.692  79.283 131.234  1.00  0.00              
ATOM     58  CA  ASN   149      19.945  79.183 129.796  1.00  0.00              
ATOM     59  C   ASN   149      18.762  78.489 129.136  1.00  0.00              
ATOM     60  O   ASN   149      18.105  77.676 129.758  1.00  0.00              
ATOM     61  N   THR   150      18.518  78.779 127.866  1.00  0.00              
ATOM     62  CA  THR   150      17.417  78.152 127.157  1.00  0.00              
ATOM     63  C   THR   150      17.912  77.388 125.943  1.00  0.00              
ATOM     64  O   THR   150      19.037  76.888 125.919  1.00  0.00              
ATOM     65  N   PRO   151      17.089  77.322 124.910  1.00  0.00              
ATOM     66  CA  PRO   151      17.454  76.602 123.696  1.00  0.00              
ATOM     67  C   PRO   151      18.639  77.238 122.965  1.00  0.00              
ATOM     68  O   PRO   151      18.999  78.385 123.221  1.00  0.00              
ATOM     69  N   ARG   152      19.246  76.459 122.074  1.00  0.00              
ATOM     70  CA  ARG   152      20.319  76.918 121.208  1.00  0.00              
ATOM     71  C   ARG   152      19.508  77.406 120.011  1.00  0.00              
ATOM     72  O   ARG   152      18.374  76.948 119.814  1.00  0.00              
ATOM     73  N   LEU   153      20.077  78.279 119.188  1.00  0.00              
ATOM     74  CA  LEU   153      19.344  78.747 118.012  1.00  0.00              
ATOM     75  C   LEU   153      19.457  77.806 116.809  1.00  0.00              
ATOM     76  O   LEU   153      18.463  77.254 116.348  1.00  0.00              
ATOM     77  N   ILE   154      20.669  77.583 116.323  1.00  0.00              
ATOM     78  CA  ILE   154      20.842  76.778 115.127  1.00  0.00              
ATOM     79  C   ILE   154      21.848  75.625 115.246  1.00  0.00              
ATOM     80  O   ILE   154      22.980  75.811 115.709  1.00  0.00              
ATOM     81  N   GLN   155      21.438  74.440 114.808  1.00  0.00              
ATOM     82  CA  GLN   155      22.332  73.291 114.838  1.00  0.00              
ATOM     83  C   GLN   155      22.225  72.489 113.555  1.00  0.00              
ATOM     84  O   GLN   155      21.127  72.132 113.130  1.00  0.00              
ATOM     85  N   ILE   156      23.356  72.280 112.893  1.00  0.00              
ATOM     86  CA  ILE   156      23.389  71.484 111.676  1.00  0.00              
ATOM     87  C   ILE   156      24.138  70.215 112.074  1.00  0.00              
ATOM     88  O   ILE   156      25.211  70.298 112.679  1.00  0.00              
ATOM     89  N   ASN   157      23.544  69.052 111.810  1.00  0.00              
ATOM     90  CA  ASN   157      24.164  67.771 112.171  1.00  0.00              
ATOM     91  C   ASN   157      24.184  66.870 110.965  1.00  0.00              
ATOM     92  O   ASN   157      23.145  66.596 110.352  1.00  0.00              
ATOM     93  N   LYS   158      25.374  66.432 110.594  1.00  0.00              
ATOM     94  CA  LYS   158      25.489  65.555 109.464  1.00  0.00              
ATOM     95  C   LYS   158      24.929  66.161 108.181  1.00  0.00              
ATOM     96  O   LYS   158      24.131  65.533 107.470  1.00  0.00              
ATOM     97  N   SER   159      25.315  67.405 107.919  1.00  0.00              
ATOM     98  CA  SER   159      24.905  68.127 106.716  1.00  0.00              
ATOM     99  C   SER   159      26.165  68.191 105.874  1.00  0.00              
ATOM    100  O   SER   159      27.261  68.472 106.391  1.00  0.00              
ATOM    101  N   LYS   160      26.017  67.919 104.586  1.00  0.00              
ATOM    102  CA  LYS   160      27.145  67.884 103.674  1.00  0.00              
ATOM    103  C   LYS   160      26.904  68.689 102.402  1.00  0.00              
ATOM    104  O   LYS   160      25.793  68.665 101.855  1.00  0.00              
ATOM    105  N   ASN   161      27.958  69.354 101.909  1.00  0.00              
ATOM    106  CA  ASN   161      27.894  70.202 100.703  1.00  0.00              
ATOM    107  C   ASN   161      26.880  71.303 100.968  1.00  0.00              
ATOM    108  O   ASN   161      25.776  71.290 100.408  1.00  0.00              
ATOM    109  N   PHE   162      27.272  72.282 101.779  1.00  0.00              
ATOM    110  CA  PHE   162      26.358  73.352 102.156  1.00  0.00              
ATOM    111  C   PHE   162      27.042  74.691 102.395  1.00  0.00              
ATOM    112  O   PHE   162      28.268  74.781 102.463  1.00  0.00              
ATOM    113  N   THR   163      26.230  75.726 102.566  1.00  0.00              
ATOM    114  CA  THR   163      26.751  77.039 102.911  1.00  0.00              
ATOM    115  C   THR   163      25.677  77.724 103.736  1.00  0.00              
ATOM    116  O   THR   163      24.482  77.440 103.603  1.00  0.00              
ATOM    117  N   LEU   164      26.123  78.517 104.684  1.00  0.00              
ATOM    118  CA  LEU   164      25.229  79.272 105.530  1.00  0.00              
ATOM    119  C   LEU   164      25.834  80.663 105.448  1.00  0.00              
ATOM    120  O   LEU   164      27.026  80.849 105.700  1.00  0.00              
ATOM    121  N   TYR   165      25.053  81.635 105.007  1.00  0.00              
ATOM    122  CA  TYR   165      25.603  82.974 104.862  1.00  0.00              
ATOM    123  C   TYR   165      24.546  84.051 104.798  1.00  0.00              
ATOM    124  O   TYR   165      23.371  83.779 104.516  1.00  0.00              
ATOM    125  N   ASN   166      24.990  85.281 105.024  1.00  0.00              
ATOM    126  CA  ASN   166      24.127  86.439 104.957  1.00  0.00              
ATOM    127  C   ASN   166      22.965  86.436 105.914  1.00  0.00              
ATOM    128  O   ASN   166      21.884  86.893 105.571  1.00  0.00              
ATOM    129  N   VAL   167      23.174  85.906 107.110  1.00  0.00              
ATOM    130  CA  VAL   167      22.114  85.900 108.094  1.00  0.00              
ATOM    131  C   VAL   167      22.674  86.421 109.407  1.00  0.00              
ATOM    132  O   VAL   167      23.893  86.471 109.600  1.00  0.00              
ATOM    133  N   SER   168      21.775  86.795 110.303  1.00  0.00              
ATOM    134  CA  SER   168      22.129  87.364 111.591  1.00  0.00              
ATOM    135  C   SER   168      21.498  86.534 112.710  1.00  0.00              
ATOM    136  O   SER   168      20.321  86.168 112.619  1.00  0.00              
ATOM    137  N   LEU   169      22.286  86.204 113.732  1.00  0.00              
ATOM    138  CA  LEU   169      21.806  85.425 114.880  1.00  0.00              
ATOM    139  C   LEU   169      22.028  86.307 116.097  1.00  0.00              
ATOM    140  O   LEU   169      23.158  86.741 116.375  1.00  0.00              
ATOM    141  N   ILE   170      20.952  86.575 116.825  1.00  0.00              
ATOM    142  CA  ILE   170      21.031  87.467 117.959  1.00  0.00              
ATOM    143  C   ILE   170      20.496  86.890 119.250  1.00  0.00              
ATOM    144  O   ILE   170      19.457  86.233 119.262  1.00  0.00              
ATOM    145  N   ASN   171      21.239  87.137 120.328  1.00  0.00              
ATOM    146  CA  ASN   171      20.886  86.761 121.685  1.00  0.00              
ATOM    147  C   ASN   171      20.329  85.343 121.889  1.00  0.00              
ATOM    148  O   ASN   171      19.192  85.172 122.335  1.00  0.00              
ATOM    149  N   SER   172      21.135  84.334 121.579  1.00  0.00              
ATOM    150  CA  SER   172      20.715  82.947 121.793  1.00  0.00              
ATOM    151  C   SER   172      20.580  82.662 123.289  1.00  0.00              
ATOM    152  O   SER   172      21.348  83.181 124.098  1.00  0.00              
ATOM    153  N   PRO   173      19.550  81.899 123.685  1.00  0.00              
ATOM    154  CA  PRO   173      19.421  81.600 125.117  1.00  0.00              
ATOM    155  C   PRO   173      20.659  80.782 125.548  1.00  0.00              
ATOM    156  O   PRO   173      21.103  80.851 126.700  1.00  0.00              
ATOM    157  N   ASN   174      21.228  80.043 124.595  1.00  0.00              
ATOM    158  CA  ASN   174      22.430  79.244 124.831  1.00  0.00              
ATOM    159  C   ASN   174      23.400  79.409 123.641  1.00  0.00              
ATOM    160  O   ASN   174      23.865  80.518 123.375  1.00  0.00              
ATOM    161  N   PHE   175      23.682  78.335 122.904  1.00  0.00              
ATOM    162  CA  PHE   175      24.599  78.403 121.758  1.00  0.00              
ATOM    163  C   PHE   175      23.919  79.045 120.586  1.00  0.00              
ATOM    164  O   PHE   175      22.696  78.934 120.445  1.00  0.00              
ATOM    165  N   HIS   176      24.712  79.680 119.721  1.00  0.00              
ATOM    166  CA  HIS   176      24.182  80.325 118.518  1.00  0.00              
ATOM    167  C   HIS   176      24.198  79.427 117.284  1.00  0.00              
ATOM    168  O   HIS   176      23.149  79.186 116.685  1.00  0.00              
ATOM    169  N   VAL   177      25.362  78.871 116.945  1.00  0.00              
ATOM    170  CA  VAL   177      25.488  78.058 115.734  1.00  0.00              
ATOM    171  C   VAL   177      26.514  76.931 115.941  1.00  0.00              
ATOM    172  O   VAL   177      27.691  77.181 116.218  1.00  0.00              
ATOM    173  N   VAL   178      26.038  75.694 115.818  1.00  0.00              
ATOM    174  CA  VAL   178      26.864  74.508 115.972  1.00  0.00              
ATOM    175  C   VAL   178      26.778  73.665 114.719  1.00  0.00              
ATOM    176  O   VAL   178      25.689  73.456 114.177  1.00  0.00              
ATOM    177  N   PHE   179      27.929  73.205 114.248  1.00  0.00              
ATOM    178  CA  PHE   179      27.990  72.326 113.095  1.00  0.00              
ATOM    179  C   PHE   179      28.553  71.028 113.655  1.00  0.00              
ATOM    180  O   PHE   179      29.724  70.951 114.040  1.00  0.00              
ATOM    181  N   SER   180      27.657  70.067 113.834  1.00  0.00              
ATOM    182  CA  SER   180      27.972  68.763 114.402  1.00  0.00              
ATOM    183  C   SER   180      28.192  67.765 113.282  1.00  0.00              
ATOM    184  O   SER   180      27.256  67.389 112.579  1.00  0.00              
ATOM    185  N   ASP   181      29.448  67.387 113.075  1.00  0.00              
ATOM    186  CA  ASP   181      29.806  66.398 112.053  1.00  0.00              
ATOM    187  C   ASP   181      29.290  66.774 110.679  1.00  0.00              
ATOM    188  O   ASP   181      28.511  66.040 110.081  1.00  0.00              
ATOM    189  N   GLY   182      29.722  67.927 110.182  1.00  0.00              
ATOM    190  CA  GLY   182      29.307  68.384 108.872  1.00  0.00              
ATOM    191  C   GLY   182      30.528  68.377 107.988  1.00  0.00              
ATOM    192  O   GLY   182      31.647  68.240 108.482  1.00  0.00              
ATOM    193  N   ASP   183      30.323  68.488 106.683  1.00  0.00              
ATOM    194  CA  ASP   183      31.449  68.499 105.767  1.00  0.00              
ATOM    195  C   ASP   183      31.184  69.217 104.458  1.00  0.00              
ATOM    196  O   ASP   183      30.029  69.385 104.051  1.00  0.00              
ATOM    197  N   GLY   184      32.271  69.681 103.839  1.00  0.00              
ATOM    198  CA  GLY   184      32.241  70.396 102.572  1.00  0.00              
ATOM    199  C   GLY   184      31.306  71.585 102.711  1.00  0.00              
ATOM    200  O   GLY   184      30.358  71.755 101.921  1.00  0.00              
ATOM    201  N   PHE   185      31.585  72.415 103.716  1.00  0.00              
ATOM    202  CA  PHE   185      30.731  73.561 103.967  1.00  0.00              
ATOM    203  C   PHE   185      31.451  74.890 103.975  1.00  0.00              
ATOM    204  O   PHE   185      32.671  74.936 104.129  1.00  0.00              
ATOM    205  N   THR   186      30.702  75.967 103.741  1.00  0.00              
ATOM    206  CA  THR   186      31.252  77.319 103.749  1.00  0.00              
ATOM    207  C   THR   186      30.288  78.176 104.533  1.00  0.00              
ATOM    208  O   THR   186      29.070  78.147 104.311  1.00  0.00              
ATOM    209  N   ALA   187      30.827  78.892 105.501  1.00  0.00              
ATOM    210  CA  ALA   187      30.032  79.749 106.362  1.00  0.00              
ATOM    211  C   ALA   187      30.668  81.130 106.265  1.00  0.00              
ATOM    212  O   ALA   187      31.879  81.270 106.449  1.00  0.00              
ATOM    213  N   TRP   188      29.872  82.138 105.927  1.00  0.00              
ATOM    214  CA  TRP   188      30.411  83.489 105.774  1.00  0.00              
ATOM    215  C   TRP   188      29.347  84.595 105.779  1.00  0.00              
ATOM    216  O   TRP   188      28.152  84.322 105.647  1.00  0.00              
ATOM    217  N   LYS   189      29.802  85.841 105.904  1.00  0.00              
ATOM    218  CA  LYS   189      28.926  87.013 105.910  1.00  0.00              
ATOM    219  C   LYS   189      27.825  86.865 106.949  1.00  0.00              
ATOM    220  O   LYS   189      26.626  86.841 106.626  1.00  0.00              
ATOM    221  N   THR   190      28.246  86.748 108.202  1.00  0.00              
ATOM    222  CA  THR   190      27.320  86.594 109.300  1.00  0.00              
ATOM    223  C   THR   190      27.730  87.475 110.452  1.00  0.00              
ATOM    224  O   THR   190      28.918  87.742 110.647  1.00  0.00              
ATOM    225  N   THR   191      26.731  87.887 111.226  1.00  0.00              
ATOM    226  CA  THR   191      26.936  88.677 112.426  1.00  0.00              
ATOM    227  C   THR   191      26.200  87.847 113.488  1.00  0.00              
ATOM    228  O   THR   191      25.088  87.362 113.238  1.00  0.00              
ATOM    229  N   ILE   192      26.871  87.599 114.608  1.00  0.00              
ATOM    230  CA  ILE   192      26.342  86.830 115.727  1.00  0.00              
ATOM    231  C   ILE   192      26.586  87.721 116.928  1.00  0.00              
ATOM    232  O   ILE   192      27.733  88.101 117.224  1.00  0.00              
ATOM    233  N   LYS   193      25.510  88.099 117.598  1.00  0.00              
ATOM    234  CA  LYS   193      25.645  88.981 118.736  1.00  0.00              
ATOM    235  C   LYS   193      24.815  88.469 119.886  1.00  0.00              
ATOM    236  O   LYS   193      23.586  88.511 119.828  1.00  0.00              
ATOM    237  N   THR   194      25.493  88.044 120.951  1.00  0.00              
ATOM    238  CA  THR   194      24.826  87.517 122.124  1.00  0.00              
ATOM    239  C   THR   194      25.213  88.209 123.413  1.00  0.00              
ATOM    240  O   THR   194      25.954  89.200 123.399  1.00  0.00              
END
