PFRMAT     AL 
TARGET     T0071 
AUTHOR     7545-6133-3082 
REMARK 
METHOD   blastp was used to find homologous sequences of which a multiple 
METHOD   sequences alignment was build and used as seed for HMMer. The 
METHOD   resulting hmm was used to search against a version of pdb which 
METHOD   only contains proteins of less than 90% homology. No significant 
METHOD   hits were found during this procedure. 
METHOD   A specifically developed neural network scored all alignments on 
METHOD   basis of their secondary structure overlap. 
METHOD   All scores achieved were fairly low and although 4 of the top ten 
METHOD   folds were immunoglobuline-like beta-sandwiches, it was decided, 
METHOD   there is not enough confidence in this prediction to use one of 
METHOD   the folds as parent. Thus it was decided to make a prediction 
METHOD   stating that the fold for target T0072 is not yet in the database 
METHOD   of known structures. 
MODEL 2 
PARENT NONE 
TER 
END 
