REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0071AL019_1_2 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : UCSC-COMPBIO 
REMARK  ---------------------------------------------------------- 
TARGET T0071  
AUTHOR 9070-5088-8627  
REMARK   
REMARK Prediction date: 4 Sept 1998  
REMARK Group name: UCSC-compbio  
REMARK Authors: Christian Barrett, Melissa Cline, Mark Diekhans, Leslie Grate,  
REMARK 	 Kevin Karplus, David Haussler, and Richard Hughey  
REMARK University of California, Santa Cruz  
REMARK   
METHOD Overview  
METHOD   
METHOD Fold recognition was performed using the Target98 (SAM-T98) method  
METHOD [3] using SAM version 2.1.1 [1], a refinement of the methods developed  
METHOD by this group for CASP2 [2].  This method attempts to find and multiply   
METHOD align a set of homologs to a given sequence, then create an HMM from that   
METHOD multiple alignment.  
METHOD   
METHOD First, a set of sequence weights is determined from the alignment.  Next,   
METHOD Modelfromalign is used to build the model from the alignment and the   
METHOD sequence weights.  Finally, hmmscore performs a local, all-paths scoring   
METHOD of the sequences, using a reversed-sequence normalization feature.  
METHOD   
METHOD The weighting method, detailed in upcoming publications [3,4],  
METHOD combines the Henikoffs' scheme [5], Dirichlet mixtures [6], and an  
METHOD entropy method to set the final weights.  
METHOD   
METHOD Alignment generation  
METHOD   
METHOD The initial step uses BLASTP to search NRP twice: once to produce a set  
METHOD of very close homologs, and once to produce a set of possible homologs.  
METHOD   
METHOD The method then uses multiple iterations of a selection, training, and   
METHOD alignment procedure.  Each iteration involves an initial alignment, a set   
METHOD of search sequences, a threshold value, and a transition regularizer.   
METHOD   
METHOD The first iteration uses a single sequence (or seed alignment) as the   
METHOD initial alignment and the close homologs found by BLASTP are used as the   
METHOD search set.  The threshold is set very strictly, so that only good matches   
METHOD to the sequence are considered.  This iteration uses a transition regularizer   
METHOD that was designed to match the gap costs used by BLASTP.  
METHOD   
METHOD On subsequent iterations the input alignment is the output from the  
METHOD previous iteration, the search set is the larger set of possible  
METHOD homologs found by BLASTP, and the thresholds are gradually loosened.  
METHOD The second through second-from-last iteration use a ``long-match''  
METHOD transition regularizer, and the final iteration uses a transition regularizer   
METHOD trained on FSSP alignments.  
METHOD   
METHOD References  
METHOD [1] R. Hughey and A. Krogh, CABIOS 12(2): 95-107, 1996.  
METHOD     http://www.cse.ucsc.edu/research/compbio/sam.html.    
METHOD [2] K. Karplus, K. Sjolander, C. Barrett, M. Cline, D. Haussler, R.  
METHOD     Hughey, L. Holm, and C. Sander, Proteins: Structure, Function, and   
METHOD     Genetics, Suppl. 1, 134-9, 1997.  
METHOD [3] K. Karplus, C. Barrett, and R. Hughey, Technical Report UCSC-CRL-98-06,  
METHOD     Department of Computer Engineering, Univ. of California, Santa Cruz, 1998.  
METHOD [4] J. Park, K. Karplus, C. Barrett, R. Hughey, D. Haussler, T. Hubbard,  
METHOD     and C. Chothia, http://cyrah.med.harvard.edu/~jong/assess_final.html, 1998.  
METHOD [5] S. Henikoff and J. C. Henikoff, JMB, vol 243, pp 574-578, Nov 1994.  
METHOD [6] K. Sjolander, K. Karplus, M. P. Brown, R. Hughey, A. Krogh, I. S.  
METHOD    Mian, and D. Haussler, CABIOS 12(4):327-345, 1996.  
METHOD   
METHOD   
METHOD Based on the commonness of SH3 domains in proteins associated with  
METHOD endocytosis (in particular in EGF which binds to Eps15), we were  
METHOD hoping that the ear-domain of the alpha adaptin would also contain SH3  
METHOD domains.  
METHOD   
METHOD Our top two scores were in range the where about half the hits were  
METHOD false positives in our tests.  The top hit (for 2reb) did not have the  
METHOD hoped-for barrels, but the second hit (for 1hvc) had barrels similar to  
METHOD SH3 domains.  We first tried to align the two domains of T0071 to the  
METHOD two barrels of 1hvc, but later decided to use an alignment to 1aa3 (a  
METHOD fragment of 2reb) for the first domain, and 1hvc only for the second  
METHOD domain.  We had two other possible hits for the first domain (5cytR  
METHOD and 1kjs), but preferred the better-scoring 1aa3/2reb hit.  
METHOD   
METHOD The automatic alignment for 1hvc covered the first barrel and the  
METHOD first two strands of the second barrel.  Most of the alignment came  
METHOD from the second domain.  We finally decided to thread the barrel  
METHOD differently, with the two strands coming from the end of the second  
METHOD T0071 domain (where the automatic alignment had switched to the other  
METHOD barrel), rather from the beginning as in 1hvc.  The chain breaks are  
METHOD located so that the rearrangement can be made with minimal change to  
METHOD the structure, though the binding site in the center of 1hvc may be  
METHOD lost.  
METHOD   
METHOD We are submitting an alignment to 1hviB, which is the single-domain  
METHOD protein that the chimeric two-domain 1hvc was created from.  Although  
METHOD this change was initially prompted by a temporary bug in the CASP web  
METHOD site, we decided that it made more sense to submit the single-domain  
METHOD protein when we were only aligning to one domain.  The single-domain  
METHOD protein was not found directly by our methods, since the rotation of  
METHOD the barrel is not permissible in a simple alignment.  It was only  
METHOD because of the duplication of the barrel in the 1hvc alignment that we  
METHOD were able to find this rotated alignment.  
METHOD   
MODEL 1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1hvi_B 
ATOM      1  N   PHE   126       6.830  -1.696  20.444  1.00  0.00              
ATOM      2  CA  PHE   126       7.862  -2.675  20.073  1.00  0.00              
ATOM      3  C   PHE   126       8.378  -3.425  21.304  1.00  0.00              
ATOM      4  O   PHE   126       8.817  -2.839  22.290  1.00  0.00              
ATOM      5  N   GLN   127       8.354  -4.740  21.259  1.00  0.00              
ATOM      6  CA  GLN   127       9.060  -5.377  22.393  1.00  0.00              
ATOM      7  C   GLN   127      10.588  -5.245  22.383  1.00  0.00              
ATOM      8  O   GLN   127      11.299  -5.265  23.382  1.00  0.00              
ATOM      9  N   PRO   128      11.074  -5.141  21.156  1.00  0.00              
ATOM     10  CA  PRO   128      12.502  -5.172  20.841  1.00  0.00              
ATOM     11  C   PRO   128      12.982  -3.865  20.277  1.00  0.00              
ATOM     12  O   PRO   128      12.203  -3.041  19.828  1.00  0.00              
ATOM     13  N   THR   129      14.301  -3.741  20.298  1.00  0.00              
ATOM     14  CA  THR   129      14.977  -2.650  19.614  1.00  0.00              
ATOM     15  C   THR   129      15.572  -3.092  18.293  1.00  0.00              
ATOM     16  O   THR   129      16.299  -4.073  18.205  1.00  0.00              
ATOM     17  N   GLU   130      15.198  -2.334  17.257  1.00  0.00              
ATOM     18  CA  GLU   130      15.651  -2.643  15.885  1.00  0.00              
ATOM     19  C   GLU   130      16.324  -1.465  15.181  1.00  0.00              
ATOM     20  O   GLU   130      15.773  -0.384  15.019  1.00  0.00              
ATOM     21  N   MET   131      17.572  -1.694  14.804  1.00  0.00              
ATOM     22  CA  MET   131      18.335  -0.620  14.173  1.00  0.00              
ATOM     23  C   MET   131      18.650  -0.882  12.714  1.00  0.00              
ATOM     24  O   MET   131      18.729  -2.021  12.283  1.00  0.00              
ATOM     25  N   ALA   132      18.816   0.210  11.969  1.00  0.00              
ATOM     26  CA  ALA   132      19.234   0.099  10.569  1.00  0.00              
ATOM     27  C   ALA   132      20.545  -0.652  10.417  1.00  0.00              
ATOM     28  O   ALA   132      21.420  -0.745  11.280  1.00  0.00              
ATOM     29  N   SER   133      20.661  -1.205   9.229  1.00  0.00              
ATOM     30  CA  SER   133      21.894  -1.934   8.968  1.00  0.00              
ATOM     31  C   SER   133      23.193  -1.150   9.262  1.00  0.00              
ATOM     32  O   SER   133      23.420   0.000   8.924  1.00  0.00              
ATOM     33  N   GLN   134      24.026  -1.847  10.013  1.00  0.00              
ATOM     34  CA  GLN   134      25.357  -1.350  10.383  1.00  0.00              
ATOM     35  C   GLN   134      26.233  -2.476  10.877  1.00  0.00              
ATOM     36  O   GLN   134      25.775  -3.544  11.262  1.00  0.00              
ATOM     37  N   ASP   135      27.527  -2.245  10.810  1.00  0.00              
ATOM     38  CA  ASP   135      28.397  -3.384  11.159  1.00  0.00              
ATOM     39  C   ASP   135      29.134  -3.251  12.452  1.00  0.00              
ATOM     40  O   ASP   135      30.290  -2.885  12.557  1.00  0.00              
ATOM     41  N   PHE   136      28.379  -3.613  13.451  1.00  0.00              
ATOM     42  CA  PHE   136      28.919  -3.787  14.793  1.00  0.00              
ATOM     43  C   PHE   136      29.894  -4.949  14.906  1.00  0.00              
ATOM     44  O   PHE   136      29.648  -6.019  14.350  1.00  0.00              
ATOM     45  N   PHE   137      30.994  -4.694  15.648  1.00  0.00              
ATOM     46  CA  PHE   137      31.801  -5.814  16.111  1.00  0.00              
ATOM     47  C   PHE   137      31.047  -6.622  17.159  1.00  0.00              
ATOM     48  O   PHE   137      30.112  -6.210  17.849  1.00  0.00              
ATOM     49  N   GLN   138      31.496  -7.852  17.238  1.00  0.00              
ATOM     50  CA  GLN   138      30.709  -8.693  18.115  1.00  0.00              
ATOM     51  C   GLN   138      30.154  -9.920  17.448  1.00  0.00              
ATOM     52  O   GLN   138      30.077 -10.101  16.246  1.00  0.00              
ATOM     53  N   ARG   139      29.784 -10.818  18.325  1.00  0.00              
ATOM     54  CA  ARG   139      29.124 -11.998  17.777  1.00  0.00              
ATOM     55  C   ARG   139      27.617 -11.755  17.566  1.00  0.00              
ATOM     56  O   ARG   139      26.987 -10.994  18.282  1.00  0.00              
ATOM     57  N   TRP   140      27.053 -12.419  16.581  1.00  0.00              
ATOM     58  CA  TRP   140      25.604 -12.269  16.472  1.00  0.00              
ATOM     59  C   TRP   140      24.818 -13.564  16.313  1.00  0.00              
ATOM     60  O   TRP   140      25.334 -14.613  15.992  1.00  0.00              
ATOM     61  N   LYS   141      23.533 -13.476  16.540  1.00  0.00              
ATOM     62  CA  LYS   141      22.685 -14.618  16.192  1.00  0.00              
ATOM     63  C   LYS   141      21.664 -14.214  15.164  1.00  0.00              
ATOM     64  O   LYS   141      21.158 -13.105  15.184  1.00  0.00              
ATOM     65  N   PRO   146      21.349 -15.123  14.263  1.00  0.00              
ATOM     66  CA  PRO   146      20.285 -14.784  13.311  1.00  0.00              
ATOM     67  C   PRO   146      18.911 -14.818  13.970  1.00  0.00              
ATOM     68  O   PRO   146      18.632 -15.579  14.883  1.00  0.00              
ATOM     69  N   GLN   147      18.044 -13.964  13.480  1.00  0.00              
ATOM     70  CA  GLN   147      16.710 -13.983  14.082  1.00  0.00              
ATOM     71  C   GLN   147      15.621 -13.455  13.145  1.00  0.00              
ATOM     72  O   GLN   147      15.865 -12.679  12.240  1.00  0.00              
ATOM     73  N   GLN   148      14.391 -13.893  13.369  1.00  0.00              
ATOM     74  CA  GLN   148      13.262 -13.293  12.631  1.00  0.00              
ATOM     75  C   GLN   148      12.261 -12.533  13.489  1.00  0.00              
ATOM     76  O   GLN   148      11.747 -13.046  14.478  1.00  0.00              
ATOM     77  N   GLU   149      12.026 -11.281  13.090  1.00  0.00              
ATOM     78  CA  GLU   149      10.983 -10.531  13.817  1.00  0.00              
ATOM     79  C   GLU   149       9.826 -10.051  12.963  1.00  0.00              
ATOM     80  O   GLU   149       9.935  -9.818  11.774  1.00  0.00              
ATOM     81  N   VAL   150       8.684  -9.989  13.597  1.00  0.00              
ATOM     82  CA  VAL   150       7.481  -9.730  12.843  1.00  0.00              
ATOM     83  C   VAL   150       6.919  -8.370  13.101  1.00  0.00              
ATOM     84  O   VAL   150       7.176  -7.704  14.095  1.00  0.00              
ATOM     85  N   GLN   151       6.115  -7.975  12.160  1.00  0.00              
ATOM     86  CA  GLN   151       5.476  -6.676  12.329  1.00  0.00              
ATOM     87  C   GLN   151       4.130  -6.673  11.661  1.00  0.00              
ATOM     88  O   GLN   151       3.561  -7.726  11.456  1.00  0.00              
ATOM     89  N   ASN   152       3.609  -5.530  11.281  1.00  0.00              
ATOM     90  CA  ASN   152       2.256  -5.662  10.751  1.00  0.00              
ATOM     91  C   ASN   152       2.077  -6.490   9.448  1.00  0.00              
ATOM     92  O   ASN   152       1.107  -7.208   9.220  1.00  0.00              
ATOM     93  N   ILE   153       3.090  -6.393   8.586  1.00  0.00              
ATOM     94  CA  ILE   153       2.899  -7.037   7.279  1.00  0.00              
ATOM     95  C   ILE   153       3.589  -8.389   7.096  1.00  0.00              
ATOM     96  O   ILE   153       3.601  -8.981   6.038  1.00  0.00              
ATOM     97  N   PHE   154       4.192  -8.871   8.168  1.00  0.00              
ATOM     98  CA  PHE   154       5.003 -10.073   8.059  1.00  0.00              
ATOM     99  C   PHE   154       6.336  -9.957   8.785  1.00  0.00              
ATOM    100  O   PHE   154       6.531  -9.151   9.681  1.00  0.00              
ATOM    101  N   LYS   155       7.251 -10.813   8.393  1.00  0.00              
ATOM    102  CA  LYS   155       8.524 -10.946   9.137  1.00  0.00              
ATOM    103  C   LYS   155       9.756 -10.527   8.385  1.00  0.00              
ATOM    104  O   LYS   155       9.846 -10.615   7.177  1.00  0.00              
ATOM    105  N   ALA   156      10.751 -10.103   9.112  1.00  0.00              
ATOM    106  CA  ALA   156      12.009  -9.869   8.409  1.00  0.00              
ATOM    107  C   ALA   156      13.128 -10.534   9.141  1.00  0.00              
ATOM    108  O   ALA   156      13.031 -10.808  10.335  1.00  0.00              
ATOM    109  N   LYS   157      14.203 -10.744   8.392  1.00  0.00              
ATOM    110  CA  LYS   157      15.393 -11.283   9.037  1.00  0.00              
ATOM    111  C   LYS   157      16.363 -10.250   9.560  1.00  0.00              
ATOM    112  O   LYS   157      16.721  -9.275   8.914  1.00  0.00              
ATOM    113  N   HIS   158      16.791 -10.502  10.799  1.00  0.00              
ATOM    114  CA  HIS   158      17.748  -9.615  11.489  1.00  0.00              
ATOM    115  C   HIS   158      18.921 -10.330  12.159  1.00  0.00              
ATOM    116  O   HIS   158      18.907 -11.524  12.425  1.00  0.00              
ATOM    117  N   PRO   159      19.944  -9.542  12.480  1.00  0.00              
ATOM    118  CA  PRO   159      20.991 -10.076  13.367  1.00  0.00              
ATOM    119  C   PRO   159      20.935  -9.533  14.785  1.00  0.00              
ATOM    120  O   PRO   159      20.812  -8.353  15.050  1.00  0.00              
ATOM    121  N   MET   160      20.984 -10.467  15.705  1.00  0.00              
ATOM    122  CA  MET   160      20.904 -10.160  17.138  1.00  0.00              
ATOM    123  C   MET   160      22.256  -9.994  17.847  1.00  0.00              
ATOM    124  O   MET   160      23.054 -10.907  17.968  1.00  0.00              
ATOM    125  N   ASP   161      22.434  -8.788  18.354  1.00  0.00              
ATOM    126  CA  ASP   161      23.576  -8.463  19.213  1.00  0.00              
ATOM    127  C   ASP   161      23.171  -8.246  20.680  1.00  0.00              
ATOM    128  O   ASP   161      22.213  -7.562  21.022  1.00  0.00              
ATOM    129  N   THR   162      23.920  -8.857  21.572  1.00  0.00              
ATOM    130  CA  THR   162      23.588  -8.627  22.993  1.00  0.00              
ATOM    131  C   THR   162      24.514  -7.674  23.700  1.00  0.00              
ATOM    132  O   THR   162      25.626  -7.470  23.250  1.00  0.00              
ATOM    133  N   GLU   163      24.062  -7.108  24.817  1.00  0.00              
ATOM    134  CA  GLU   163      24.929  -6.218  25.611  1.00  0.00              
ATOM    135  C   GLU   163      25.393  -4.930  24.973  1.00  0.00              
ATOM    136  O   GLU   163      26.453  -4.417  25.280  1.00  0.00              
ATOM    137  N   ILE   164      24.598  -4.408  24.049  1.00  0.00              
ATOM    138  CA  ILE   164      24.997  -3.148  23.415  1.00  0.00              
ATOM    139  C   ILE   164      24.614  -1.945  24.288  1.00  0.00              
ATOM    140  O   ILE   164      23.505  -1.793  24.775  1.00  0.00              
ATOM    141  N   LYS   166      25.588  -1.064  24.449  1.00  0.00              
ATOM    142  CA  LYS   166      25.302   0.240  25.057  1.00  0.00              
ATOM    143  C   LYS   166      24.758   1.255  24.075  1.00  0.00              
ATOM    144  O   LYS   166      25.352   1.628  23.077  1.00  0.00              
ATOM    145  N   ALA   167      23.590   1.730  24.421  1.00  0.00              
ATOM    146  CA  ALA   167      23.061   2.881  23.684  1.00  0.00              
ATOM    147  C   ALA   167      22.801   4.024  24.636  1.00  0.00              
ATOM    148  O   ALA   167      22.374   3.872  25.765  1.00  0.00              
ATOM    149  N   LYS   168      23.059   5.201  24.164  1.00  0.00              
ATOM    150  CA  LYS   168      22.658   6.303  24.994  1.00  0.00              
ATOM    151  C   LYS   168      21.521   7.139  24.423  1.00  0.00              
ATOM    152  O   LYS   168      21.547   7.700  23.343  1.00  0.00              
ATOM    153  N   ILE   169      20.463   7.198  25.178  1.00  0.00              
ATOM    154  CA  ILE   169      19.251   7.833  24.653  1.00  0.00              
ATOM    155  C   ILE   169      18.951   9.144  25.342  1.00  0.00              
ATOM    156  O   ILE   169      18.648   9.211  26.537  1.00  0.00              
ATOM    157  N   ILE   170      19.106  10.227  24.579  1.00  0.00              
ATOM    158  CA  ILE   170      18.976  11.561  25.253  1.00  0.00              
ATOM    159  C   ILE   170      19.703  11.695  26.607  1.00  0.00              
ATOM    160  O   ILE   170      19.174  12.058  27.650  1.00  0.00              
ATOM    161  N   GLY   171      20.971  11.285  26.556  1.00  0.00              
ATOM    162  CA  GLY   171      21.779  11.327  27.778  1.00  0.00              
ATOM    163  C   GLY   171      21.657  10.166  28.744  1.00  0.00              
ATOM    164  O   GLY   171      22.447   9.978  29.645  1.00  0.00              
ATOM    165  N   PHE   172      20.631   9.365  28.553  1.00  0.00              
ATOM    166  CA  PHE   172      20.490   8.197  29.436  1.00  0.00              
ATOM    167  C   PHE   172      21.039   6.902  28.900  1.00  0.00              
ATOM    168  O   PHE   172      20.663   6.457  27.830  1.00  0.00              
ATOM    169  N   GLY   173      21.921   6.291  29.655  1.00  0.00              
ATOM    170  CA  GLY   173      22.410   5.015  29.135  1.00  0.00              
ATOM    171  C   GLY   173      21.517   3.790  29.327  1.00  0.00              
ATOM    172  O   GLY   173      20.794   3.627  30.299  1.00  0.00              
ATOM    173  N   SER   174      21.591   2.920  28.331  1.00  0.00              
ATOM    174  CA  SER   174      20.872   1.663  28.458  1.00  0.00              
ATOM    175  C   SER   174      21.728   0.584  27.825  1.00  0.00              
ATOM    176  O   SER   174      22.520   0.820  26.926  1.00  0.00              
ATOM    177  N   ALA   175      21.611  -0.605  28.347  1.00  0.00              
ATOM    178  CA  ALA   175      22.436  -1.670  27.799  1.00  0.00              
ATOM    179  C   ALA   175      21.599  -2.898  27.546  1.00  0.00              
ATOM    180  O   ALA   175      20.908  -3.406  28.407  1.00  0.00              
ATOM    181  N   LEU   176      21.642  -3.374  26.320  1.00  0.00              
ATOM    182  CA  LEU   176      20.831  -4.559  26.043  1.00  0.00              
ATOM    183  C   LEU   176      20.922  -5.154  24.649  1.00  0.00              
ATOM    184  O   LEU   176      21.839  -4.930  23.884  1.00  0.00              
ATOM    185  N   LEU   177      19.912  -5.938  24.347  1.00  0.00              
ATOM    186  CA  LEU   177      19.905  -6.562  23.013  1.00  0.00              
ATOM    187  C   LEU   177      19.380  -5.629  21.939  1.00  0.00              
ATOM    188  O   LEU   177      18.333  -4.998  22.043  1.00  0.00              
ATOM    189  N   GLU   178      20.153  -5.593  20.872  1.00  0.00              
ATOM    190  CA  GLU   178      19.775  -4.842  19.675  1.00  0.00              
ATOM    191  C   GLU   178      19.716  -5.761  18.474  1.00  0.00              
ATOM    192  O   GLU   178      20.576  -6.596  18.279  1.00  0.00              
ATOM    193  N   GLU   179      18.643  -5.589  17.709  1.00  0.00              
ATOM    194  CA  GLU   179      18.480  -6.309  16.432  1.00  0.00              
ATOM    195  C   GLU   179      18.822  -5.426  15.242  1.00  0.00              
ATOM    196  O   GLU   179      18.439  -4.271  15.153  1.00  0.00              
ATOM    197  N   VAL   180      19.589  -5.980  14.340  1.00  0.00              
ATOM    198  CA  VAL   180      20.017  -5.148  13.211  1.00  0.00              
ATOM    199  C   VAL   180      19.534  -5.720  11.897  1.00  0.00              
ATOM    200  O   VAL   180      19.693  -6.891  11.604  1.00  0.00              
ATOM    201  N   ASP   181      18.969  -4.853  11.096  1.00  0.00              
ATOM    202  CA  ASP   181      18.536  -5.321   9.785  1.00  0.00              
ATOM    203  C   ASP   181      17.972  -4.223   8.896  1.00  0.00              
ATOM    204  O   ASP   181      18.117  -3.041   9.159  1.00  0.00              
ATOM    205  N   PRO   182      17.318  -4.646   7.804  1.00  0.00              
ATOM    206  CA  PRO   182      16.812  -3.653   6.819  1.00  0.00              
ATOM    207  C   PRO   182      15.555  -2.870   7.198  1.00  0.00              
ATOM    208  O   PRO   182      14.622  -2.754   6.424  1.00  0.00              
ATOM    209  N   ASN   183      15.541  -2.285   8.387  1.00  0.00              
ATOM    210  CA  ASN   183      14.426  -1.363   8.758  1.00  0.00              
ATOM    211  C   ASN   183      14.495   0.058   8.157  1.00  0.00              
ATOM    212  O   ASN   183      15.568   0.635   8.034  1.00  0.00              
ATOM    213  N   PRO   184      13.344   0.639   7.785  1.00  0.00              
ATOM    214  CA  PRO   184      13.317   2.058   7.371  1.00  0.00              
ATOM    215  C   PRO   184      13.734   3.058   8.448  1.00  0.00              
ATOM    216  O   PRO   184      14.331   4.110   8.232  1.00  0.00              
ATOM    217  N   ALA   185      13.358   2.675   9.673  1.00  0.00              
ATOM    218  CA  ALA   185      13.543   3.565  10.829  1.00  0.00              
ATOM    219  C   ALA   185      14.248   2.876  12.004  1.00  0.00              
ATOM    220  O   ALA   185      14.041   1.705  12.273  1.00  0.00              
ATOM    221  N   ASN   186      15.109   3.603  12.692  1.00  0.00              
ATOM    222  CA  ASN   186      15.586   3.036  13.963  1.00  0.00              
ATOM    223  C   ASN   186      14.502   3.056  15.077  1.00  0.00              
ATOM    224  O   ASN   186      13.842   4.048  15.359  1.00  0.00              
ATOM    225  N   PHE   187      14.308   1.900  15.671  1.00  0.00              
ATOM    226  CA  PHE   187      13.226   1.763  16.650  1.00  0.00              
ATOM    227  C   PHE   187      13.765   1.468  18.026  1.00  0.00              
ATOM    228  O   PHE   187      14.399   0.446  18.220  1.00  0.00              
ATOM    229  N   VAL   188      13.490   2.365  18.976  1.00  0.00              
ATOM    230  CA  VAL   188      13.782   1.997  20.374  1.00  0.00              
ATOM    231  C   VAL   188      12.559   1.366  21.064  1.00  0.00              
ATOM    232  O   VAL   188      11.521   1.975  21.238  1.00  0.00              
ATOM    233  N   GLY   189      12.736   0.095  21.423  1.00  0.00              
ATOM    234  CA  GLY   189      11.655  -0.693  22.035  1.00  0.00              
ATOM    235  C   GLY   189      11.687  -0.782  23.561  1.00  0.00              
ATOM    236  O   GLY   189      12.553  -0.236  24.237  1.00  0.00              
ATOM    237  N   ALA   190      10.714  -1.511  24.098  1.00  0.00              
ATOM    238  CA  ALA   190      10.549  -1.551  25.572  1.00  0.00              
ATOM    239  C   ALA   190      11.695  -2.096  26.398  1.00  0.00              
ATOM    240  O   ALA   190      11.975  -1.663  27.500  1.00  0.00              
ATOM    241  N   GLY   191      12.439  -3.003  25.796  1.00  0.00              
ATOM    242  CA  GLY   191      13.672  -3.467  26.442  1.00  0.00              
ATOM    243  C   GLY   191      14.704  -2.412  26.827  1.00  0.00              
ATOM    244  O   GLY   191      15.427  -2.548  27.783  1.00  0.00              
ATOM    245  N   ILE   192      14.765  -1.343  26.064  1.00  0.00              
ATOM    246  CA  ILE   192      15.634  -0.225  26.457  1.00  0.00              
ATOM    247  C   ILE   192      14.923   0.978  27.129  1.00  0.00              
ATOM    248  O   ILE   192      15.408   1.678  28.013  1.00  0.00              
ATOM    249  N   ILE   193      13.662   1.162  26.712  1.00  0.00              
ATOM    250  CA  ILE   193      12.804   2.196  27.330  1.00  0.00              
ATOM    251  C   ILE   193      12.587   2.114  28.847  1.00  0.00              
ATOM    252  O   ILE   193      12.609   3.087  29.593  1.00  0.00              
ATOM    253  N   THR   198      12.405   0.884  29.277  1.00  0.00              
ATOM    254  CA  THR   198      12.308   0.598  30.718  1.00  0.00              
ATOM    255  C   THR   198      13.540   0.992  31.465  1.00  0.00              
ATOM    256  O   THR   198      13.473   1.589  32.523  1.00  0.00              
ATOM    257  N   GLN   199      14.689   0.745  30.843  1.00  0.00              
ATOM    258  CA  GLN   199      15.925   1.153  31.501  1.00  0.00              
ATOM    259  C   GLN   199      16.168   2.629  31.695  1.00  0.00              
ATOM    260  O   GLN   199      16.824   3.068  32.636  1.00  0.00              
ATOM    261  N   ILE   200      15.601   3.411  30.766  1.00  0.00              
ATOM    262  CA  ILE   200      15.706   4.858  30.975  1.00  0.00              
ATOM    263  C   ILE   200      14.615   5.529  31.836  1.00  0.00              
ATOM    264  O   ILE   200      14.556   6.722  32.053  1.00  0.00              
ATOM    265  N   GLY   201      13.744   4.683  32.371  1.00  0.00              
ATOM    266  CA  GLY   201      12.699   5.183  33.272  1.00  0.00              
ATOM    267  C   GLY   201      11.519   5.791  32.578  1.00  0.00              
ATOM    268  O   GLY   201      10.876   6.709  33.040  1.00  0.00              
ATOM    269  N   CYS   202      11.294   5.265  31.381  1.00  0.00              
ATOM    270  CA  CYS   202      10.321   5.916  30.511  1.00  0.00              
ATOM    271  C   CYS   202       8.920   5.423  30.767  1.00  0.00              
ATOM    272  O   CYS   202       8.690   4.225  30.875  1.00  0.00              
ATOM    273  N   LEU   203       7.993   6.371  30.909  1.00  0.00              
ATOM    274  CA  LEU   203       6.561   6.047  31.118  1.00  0.00              
ATOM    275  C   LEU   203       5.581   6.704  30.146  1.00  0.00              
ATOM    276  O   LEU   203       5.836   7.715  29.518  1.00  0.00              
ATOM    277  N   LEU   204       4.407   6.087  30.061  1.00  0.00              
ATOM    278  CA  LEU   204       3.282   6.705  29.347  1.00  0.00              
ATOM    279  C   LEU   204       2.298   7.299  30.293  1.00  0.00              
ATOM    280  O   LEU   204       1.831   6.680  31.232  1.00  0.00              
ATOM    281  N   LEU   210      12.631  14.527  30.445  1.00  0.00              
ATOM    282  CA  LEU   210      11.813  15.241  29.428  1.00  0.00              
ATOM    283  C   LEU   210      10.424  14.640  29.186  1.00  0.00              
ATOM    284  O   LEU   210      10.199  13.459  29.375  1.00  0.00              
ATOM    285  N   GLN   211       9.515  15.512  28.778  1.00  0.00              
ATOM    286  CA  GLN   211       8.204  15.071  28.306  1.00  0.00              
ATOM    287  C   GLN   211       8.081  15.222  26.796  1.00  0.00              
ATOM    288  O   GLN   211       8.229  16.295  26.231  1.00  0.00              
ATOM    289  N   ALA   212       7.779  14.104  26.169  1.00  0.00              
ATOM    290  CA  ALA   212       7.555  14.093  24.725  1.00  0.00              
ATOM    291  C   ALA   212       6.090  13.962  24.358  1.00  0.00              
ATOM    292  O   ALA   212       5.339  13.071  24.727  1.00  0.00              
ATOM    293  N   GLN   213       5.668  14.979  23.632  1.00  0.00              
ATOM    294  CA  GLN   213       4.308  14.916  23.082  1.00  0.00              
ATOM    295  C   GLN   213       4.275  14.082  21.795  1.00  0.00              
ATOM    296  O   GLN   213       5.282  13.755  21.163  1.00  0.00              
ATOM    297  N   MET   214       3.054  13.746  21.444  1.00  0.00              
ATOM    298  CA  MET   214       2.896  12.827  20.314  1.00  0.00              
ATOM    299  C   MET   214       2.289  13.423  19.036  1.00  0.00              
ATOM    300  O   MET   214       1.818  12.724  18.160  1.00  0.00              
ATOM    301  N   TYR   215       2.295  14.760  18.926  1.00  0.00              
ATOM    302  CA  TYR   215       1.861  15.409  17.662  1.00  0.00              
ATOM    303  C   TYR   215       2.658  15.013  16.433  1.00  0.00              
ATOM    304  O   TYR   215       2.163  14.819  15.334  1.00  0.00              
ATOM    305  N   ARG   216       3.940  14.863  16.684  1.00  0.00              
ATOM    306  CA  ARG   216       4.838  14.279  15.700  1.00  0.00              
ATOM    307  C   ARG   216       5.362  12.928  16.129  1.00  0.00              
ATOM    308  O   ARG   216       5.212  12.521  17.264  1.00  0.00              
ATOM    309  N   LEU   217       6.014  12.233  15.208  1.00  0.00              
ATOM    310  CA  LEU   217       6.612  10.961  15.643  1.00  0.00              
ATOM    311  C   LEU   217       7.684  11.164  16.695  1.00  0.00              
ATOM    312  O   LEU   217       8.481  12.053  16.476  1.00  0.00              
ATOM    313  N   THR   218       7.716  10.389  17.787  1.00  0.00              
ATOM    314  CA  THR   218       8.718  10.646  18.832  1.00  0.00              
ATOM    315  C   THR   218      10.138  10.250  18.492  1.00  0.00              
ATOM    316  O   THR   218      10.689   9.305  19.016  1.00  0.00              
ATOM    317  N   LEU   219      10.722  11.015  17.570  1.00  0.00              
ATOM    318  CA  LEU   219      12.150  10.840  17.183  1.00  0.00              
ATOM    319  C   LEU   219      13.177  11.550  18.062  1.00  0.00              
ATOM    320  O   LEU   219      13.128  12.742  18.316  1.00  0.00              
ATOM    321  N   ARG   220      14.112  10.782  18.557  1.00  0.00              
ATOM    322  CA  ARG   220      15.126  11.433  19.376  1.00  0.00              
ATOM    323  C   ARG   220      16.507  11.049  18.885  1.00  0.00              
ATOM    324  O   ARG   220      16.646  10.108  18.114  1.00  0.00              
ATOM    325  N   THR   221      17.525  11.771  19.377  1.00  0.00              
ATOM    326  CA  THR   221      18.930  11.344  19.109  1.00  0.00              
ATOM    327  C   THR   221      19.483  10.291  20.019  1.00  0.00              
ATOM    328  O   THR   221      19.451  10.373  21.238  1.00  0.00              
ATOM    329  N   SER   222      20.047   9.293  19.380  1.00  0.00              
ATOM    330  CA  SER   222      20.765   8.302  20.165  1.00  0.00              
ATOM    331  C   SER   222      22.246   8.272  19.802  1.00  0.00              
ATOM    332  O   SER   222      22.694   8.576  18.706  1.00  0.00              
ATOM    333  N   LYS   223      23.013   7.887  20.780  1.00  0.00              
ATOM    334  CA  LYS   223      24.406   7.634  20.456  1.00  0.00              
ATOM    335  C   LYS   223      24.705   6.144  20.539  1.00  0.00              
ATOM    336  O   LYS   223      24.410   5.447  21.503  1.00  0.00              
ATOM    337  N   ASP   224      25.273   5.637  19.474  1.00  0.00              
ATOM    338  CA  ASP   224      25.653   4.224  19.471  1.00  0.00              
ATOM    339  C   ASP   224      26.984   4.023  18.767  1.00  0.00              
ATOM    340  O   ASP   224      27.296   4.659  17.782  1.00  0.00              
ATOM    341  N   THR   225      27.848   3.194  19.330  1.00  0.00              
ATOM    342  CA  THR   225      29.251   3.208  18.845  1.00  0.00              
ATOM    343  C   THR   225      29.949   4.580  18.744  1.00  0.00              
ATOM    344  O   THR   225      30.737   4.845  17.854  1.00  0.00              
ATOM    345  N   SER   227      29.592   5.502  19.641  1.00  0.00              
ATOM    346  CA  SER   227      30.106   6.870  19.437  1.00  0.00              
ATOM    347  C   SER   227      29.610   7.672  18.220  1.00  0.00              
ATOM    348  O   SER   227      29.957   8.822  17.992  1.00  0.00              
ATOM    349  N   GLN   228      28.713   7.040  17.457  1.00  0.00              
ATOM    350  CA  GLN   228      27.943   7.826  16.477  1.00  0.00              
ATOM    351  C   GLN   228      26.486   8.175  16.838  1.00  0.00              
ATOM    352  O   GLN   228      25.737   7.445  17.472  1.00  0.00              
ATOM    353  N   ARG   229      26.124   9.378  16.417  1.00  0.00              
ATOM    354  CA  ARG   229      24.758   9.860  16.637  1.00  0.00              
ATOM    355  C   ARG   229      23.785   9.407  15.570  1.00  0.00              
ATOM    356  O   ARG   229      24.042   9.508  14.386  1.00  0.00              
ATOM    357  N   LEU   230      22.638   8.928  16.004  1.00  0.00              
ATOM    358  CA  LEU   230      21.544   8.646  15.060  1.00  0.00              
ATOM    359  C   LEU   230      20.178   9.110  15.529  1.00  0.00              
ATOM    360  O   LEU   230      19.947   9.427  16.682  1.00  0.00              
ATOM    361  N   CYS   231      19.233   9.128  14.623  1.00  0.00              
ATOM    362  CA  CYS   231      17.897   9.328  15.182  1.00  0.00              
ATOM    363  C   CYS   231      17.033   8.070  15.220  1.00  0.00              
ATOM    364  O   CYS   231      17.114   7.175  14.378  1.00  0.00              
ATOM    365  N   GLU   232      16.221   8.024  16.268  1.00  0.00              
ATOM    366  CA  GLU   232      15.423   6.826  16.524  1.00  0.00              
ATOM    367  C   GLU   232      14.055   7.119  17.121  1.00  0.00              
ATOM    368  O   GLU   232      13.828   8.119  17.783  1.00  0.00              
ATOM    369  N   LEU   233      13.136   6.225  16.822  1.00  0.00              
ATOM    370  CA  LEU   233      11.727   6.346  17.244  1.00  0.00              
ATOM    371  C   LEU   233      11.502   5.693  18.610  1.00  0.00              
ATOM    372  O   LEU   233      11.741   4.504  18.777  1.00  0.00              
ATOM    373  N   LEU   234      11.031   6.483  19.574  1.00  0.00              
ATOM    374  CA  LEU   234      10.628   5.848  20.835  1.00  0.00              
ATOM    375  C   LEU   234       9.295   5.128  20.756  1.00  0.00              
ATOM    376  O   LEU   234       8.233   5.697  20.569  1.00  0.00              
ATOM    377  N   SER   235       9.400   3.813  20.854  1.00  0.00              
ATOM    378  CA  SER   235       8.249   3.007  20.515  1.00  0.00              
ATOM    379  C   SER   235       7.755   2.089  21.615  1.00  0.00              
ATOM    380  O   SER   235       8.260   1.021  21.906  1.00  0.00              
ATOM    381  N   GLU   236       6.649   2.506  22.199  1.00  0.00              
ATOM    382  CA  GLU   236       6.076   1.646  23.242  1.00  0.00              
ATOM    383  C   GLU   236       5.381   0.389  22.804  1.00  0.00              
ATOM    384  O   GLU   236       5.078  -0.491  23.584  1.00  0.00              
ATOM    385  N   GLN   237       5.132   0.307  21.499  1.00  0.00              
ATOM    386  CA  GLN   237       4.572  -0.936  20.935  1.00  0.00              
ATOM    387  C   GLN   237       5.544  -2.001  20.363  1.00  0.00              
ATOM    388  O   GLN   237       5.170  -3.060  19.895  1.00  0.00              
END
