REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0071AL215_1_1 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : ZHU-JUN 
REMARK  ---------------------------------------------------------- 
TARGET     T0071  
AUTHOR     4070-8855-4894  
METHOD     The target is compared with PDB25 database (U.Hobohm et al., 1992).  
METHOD     For each structure in PDB25, a model is built in the following way:  
METHOD     the sequence (query) is compared with NR database using transitive   
METHOD     BLAST (Neuwald et al. 1997). Similar sequences are collected and   
METHOD     purged at score 150.  Those sequences are aligned with query   
METHOD     sequence using Bayesian aligner (Zhu et al., 1998) and a   
METHOD     profile-like model is built (Lawrence et al. 1993; Gribskov et al.,  
METHOD     1987; unpublished result by Jun Zhu, Roland Luthy and Charlse E.   
METHOD     Lawrence).  Then, the target file is compared with the models   
METHOD     derived from PDB25.  
MODEL     1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1huw 
ATOM      1  N   PHE     8     -15.309  -7.827 -48.542  1.00  0.00              
ATOM      2  CA  PHE     8     -15.460  -9.231 -48.169  1.00  0.00              
ATOM      3  C   PHE     8     -15.661  -9.465 -46.667  1.00  0.00              
ATOM      4  O   PHE     8     -14.993  -8.820 -45.844  1.00  0.00              
ATOM      5  N   VAL     9     -16.574 -10.383 -46.268  1.00  0.00              
ATOM      6  CA  VAL     9     -16.856 -10.717 -44.881  1.00  0.00              
ATOM      7  C   VAL     9     -15.661 -11.265 -44.135  1.00  0.00              
ATOM      8  O   VAL     9     -15.009 -12.233 -44.490  1.00  0.00              
ATOM      9  N   CYS    10     -15.390 -10.590 -43.047  1.00  0.00              
ATOM     10  CA  CYS    10     -14.239 -10.919 -42.247  1.00  0.00              
ATOM     11  C   CYS    10     -14.478 -11.713 -40.932  1.00  0.00              
ATOM     12  O   CYS    10     -13.573 -11.824 -40.099  1.00  0.00              
ATOM     13  N   LYS    11     -15.654 -12.296 -40.639  1.00  0.00              
ATOM     14  CA  LYS    11     -15.785 -13.180 -39.482  1.00  0.00              
ATOM     15  C   LYS    11     -16.099 -14.544 -40.061  1.00  0.00              
ATOM     16  O   LYS    11     -16.972 -14.678 -40.905  1.00  0.00              
ATOM     17  N   ASN    12     -15.395 -15.613 -39.686  1.00  0.00              
ATOM     18  CA  ASN    12     -15.607 -16.941 -40.243  1.00  0.00              
ATOM     19  C   ASN    12     -16.953 -17.465 -39.850  1.00  0.00              
ATOM     20  O   ASN    12     -17.475 -17.144 -38.775  1.00  0.00              
ATOM     21  N   ASN    13     -17.507 -18.220 -40.782  1.00  0.00              
ATOM     22  CA  ASN    13     -18.793 -18.862 -40.560  1.00  0.00              
ATOM     23  C   ASN    13     -18.885 -19.613 -39.224  1.00  0.00              
ATOM     24  O   ASN    13     -19.890 -19.437 -38.560  1.00  0.00              
ATOM     25  N   GLY    14     -17.891 -20.360 -38.738  1.00  0.00              
ATOM     26  CA  GLY    14     -18.031 -21.097 -37.505  1.00  0.00              
ATOM     27  C   GLY    14     -18.196 -20.250 -36.251  1.00  0.00              
ATOM     28  O   GLY    14     -18.849 -20.657 -35.275  1.00  0.00              
ATOM     29  N   VAL    15     -17.564 -19.065 -36.282  1.00  0.00              
ATOM     30  CA  VAL    15     -17.691 -18.122 -35.188  1.00  0.00              
ATOM     31  C   VAL    15     -19.081 -17.523 -35.197  1.00  0.00              
ATOM     32  O   VAL    15     -19.646 -17.338 -34.140  1.00  0.00              
ATOM     33  N   LEU    16     -19.607 -17.179 -36.368  1.00  0.00              
ATOM     34  CA  LEU    16     -20.937 -16.681 -36.488  1.00  0.00              
ATOM     35  C   LEU    16     -21.926 -17.743 -35.979  1.00  0.00              
ATOM     36  O   LEU    16     -22.909 -17.370 -35.344  1.00  0.00              
ATOM     37  N   PHE    17     -21.769 -19.048 -36.272  1.00  0.00              
ATOM     38  CA  PHE    17     -22.703 -20.073 -35.795  1.00  0.00              
ATOM     39  C   PHE    17     -22.571 -20.265 -34.278  1.00  0.00              
ATOM     40  O   PHE    17     -23.530 -20.521 -33.576  1.00  0.00              
ATOM     41  N   GLU    18     -21.376 -20.118 -33.744  1.00  0.00              
ATOM     42  CA  GLU    18     -21.117 -20.238 -32.339  1.00  0.00              
ATOM     43  C   GLU    18     -21.743 -19.143 -31.543  1.00  0.00              
ATOM     44  O   GLU    18     -22.321 -19.398 -30.512  1.00  0.00              
ATOM     45  N   ASN    19     -21.579 -17.922 -32.038  1.00  0.00              
ATOM     46  CA  ASN    19     -22.085 -16.747 -31.391  1.00  0.00              
ATOM     47  C   ASN    19     -23.579 -16.679 -31.402  1.00  0.00              
ATOM     48  O   ASN    19     -24.120 -16.184 -30.414  1.00  0.00              
ATOM     49  N   GLN    20     -24.165 -17.166 -32.505  1.00  0.00              
ATOM     50  CA  GLN    20     -25.600 -17.248 -32.664  1.00  0.00              
ATOM     51  C   GLN    20     -26.120 -18.283 -31.691  1.00  0.00              
ATOM     52  O   GLN    20     -27.095 -17.983 -31.014  1.00  0.00              
ATOM     53  N   LEU    21     -25.526 -19.477 -31.563  1.00  0.00              
ATOM     54  CA  LEU    21     -25.894 -20.429 -30.521  1.00  0.00              
ATOM     55  C   LEU    21     -25.655 -19.856 -29.113  1.00  0.00              
ATOM     56  O   LEU    21     -26.511 -20.076 -28.264  1.00  0.00              
ATOM     57  N   LEU    22     -24.575 -19.169 -28.748  1.00  0.00              
ATOM     58  CA  LEU    22     -24.422 -18.657 -27.399  1.00  0.00              
ATOM     59  C   LEU    22     -25.513 -17.664 -26.953  1.00  0.00              
ATOM     60  O   LEU    22     -25.925 -17.631 -25.796  1.00  0.00              
ATOM     61  N   GLN    23     -25.984 -16.858 -27.896  1.00  0.00              
ATOM     62  CA  GLN    23     -26.995 -15.883 -27.626  1.00  0.00              
ATOM     63  C   GLN    23     -28.291 -16.589 -27.345  1.00  0.00              
ATOM     64  O   GLN    23     -28.989 -16.179 -26.449  1.00  0.00              
ATOM     65  N   ILE    24     -28.610 -17.614 -28.144  1.00  0.00              
ATOM     66  CA  ILE    24     -29.817 -18.394 -27.963  1.00  0.00              
ATOM     67  C   ILE    24     -29.793 -19.176 -26.674  1.00  0.00              
ATOM     68  O   ILE    24     -30.806 -19.260 -26.013  1.00  0.00              
ATOM     69  N   GLY    25     -28.678 -19.768 -26.282  1.00  0.00              
ATOM     70  CA  GLY    25     -28.535 -20.502 -25.023  1.00  0.00              
ATOM     71  C   GLY    25     -28.767 -19.623 -23.779  1.00  0.00              
ATOM     72  O   GLY    25     -29.327 -20.082 -22.782  1.00  0.00              
END
