REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0074AL212_4 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : BRYANT 
REMARK  ---------------------------------------------------------- 
TARGET T0074  
REMARK =======================================================================  
AUTHOR 2738-1421-4442  
REMARK Prepared by Anna Panchenko, Aron Marchler-Bauer, and Steve Bryant, NCBI   
REMARK =======================================================================  
METHOD Predictions were made with the potential and alignment model used in   
METHOD CASP1 and CASP2 predictions, as described by Madej et al. in Proteins   
METHOD 23:356-369, 1995. Convergence control has been added to the Gibbs-  
METHOD Sampling alignment model. In addition to contact-based threading   
METHOD potentials, PSSMs summarizing sequence conservation in the family   
METHOD represented by the template structure are used to score threading  
METHOD alignments. Threading "cores" summarizing the conserved substructure   
METHOD in the templates used for models below have been based on structure  
METHOD superpositions generated by VAST (Gibrat et al., Curr Opin Struct  
METHOD Biol 1996 Jun;6(3):377-385 ).  
METHOD The alignments have been calculated with the Gibbs Sampling threading  
METHOD engine (and with alignment constraints derived from sequence comparison,  
METHOD based on manually generated alignments, if PSSMs were not used to  
METHOD score alignments, models 3 and 4). The templates were  
METHOD identified by a sequence database search using BLAST, and in threading   
METHOD database-searches using PSSMs. Models 1 and 2 have been calculated  
METHOD with a weight of 1.0 for the PSSM-based scoring function, models 3  
METHOD and 4 with the contact-based threading potential and alignment   
METHOD constraints, model 5 represents the top hit from the automated  
METHOD threading database search.  
REMARK =======================================================================  
MODEL  4  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 2sas 
ATOM      1  N   LYS   125      25.539  -6.533  30.417  1.00  0.00              
ATOM      2  CA  LYS   125      26.433  -5.450  30.082  1.00  0.00              
ATOM      3  C   LYS   125      25.909  -4.706  28.823  1.00  0.00              
ATOM      4  O   LYS   125      25.686  -3.507  28.906  1.00  0.00              
ATOM      5  N   PRO   126      25.745  -5.475  27.780  1.00  0.00              
ATOM      6  CA  PRO   126      25.261  -5.078  26.475  1.00  0.00              
ATOM      7  C   PRO   126      23.983  -4.247  26.588  1.00  0.00              
ATOM      8  O   PRO   126      23.894  -3.167  25.987  1.00  0.00              
ATOM      9  N   GLU   127      23.028  -4.804  27.349  1.00  0.00              
ATOM     10  CA  GLU   127      21.774  -4.103  27.549  1.00  0.00              
ATOM     11  C   GLU   127      21.999  -2.721  28.162  1.00  0.00              
ATOM     12  O   GLU   127      21.409  -1.726  27.749  1.00  0.00              
ATOM     13  N   ASP   128      22.837  -2.679  29.187  1.00  0.00              
ATOM     14  CA  ASP   128      23.155  -1.486  29.945  1.00  0.00              
ATOM     15  C   ASP   128      23.904  -0.453  29.124  1.00  0.00              
ATOM     16  O   ASP   128      23.754   0.765  29.396  1.00  0.00              
ATOM     17  N   LYS   129      24.638  -0.950  28.181  1.00  0.00              
ATOM     18  CA  LYS   129      25.430  -0.124  27.240  1.00  0.00              
ATOM     19  C   LYS   129      24.489   0.704  26.349  1.00  0.00              
ATOM     20  O   LYS   129      24.714   1.923  26.158  1.00  0.00              
ATOM     21  N   ALA   130      23.477   0.062  25.821  1.00  0.00              
ATOM     22  CA  ALA   130      22.476   0.629  24.913  1.00  0.00              
ATOM     23  C   ALA   130      21.552   1.510  25.715  1.00  0.00              
ATOM     24  O   ALA   130      21.069   2.507  25.163  1.00  0.00              
ATOM     25  N   LYS   131      21.271   1.125  26.954  1.00  0.00              
ATOM     26  CA  LYS   131      20.444   1.999  27.813  1.00  0.00              
ATOM     27  C   LYS   131      21.212   3.310  28.066  1.00  0.00              
ATOM     28  O   LYS   131      20.694   4.429  27.973  1.00  0.00              
ATOM     29  N   TYR   132      22.488   3.206  28.346  1.00  0.00              
ATOM     30  CA  TYR   132      23.312   4.409  28.556  1.00  0.00              
ATOM     31  C   TYR   132      23.178   5.253  27.279  1.00  0.00              
ATOM     32  O   TYR   132      22.887   6.456  27.325  1.00  0.00              
ATOM     33  N   ASP   133      23.349   4.587  26.127  1.00  0.00              
ATOM     34  CA  ASP   133      23.232   5.205  24.821  1.00  0.00              
ATOM     35  C   ASP   133      22.006   6.072  24.706  1.00  0.00              
ATOM     36  O   ASP   133      22.158   7.245  24.305  1.00  0.00              
ATOM     37  N   ALA   134      20.835   5.583  24.978  1.00  0.00              
ATOM     38  CA  ALA   134      19.601   6.422  24.906  1.00  0.00              
ATOM     39  C   ALA   134      19.576   7.512  25.947  1.00  0.00              
ATOM     40  O   ALA   134      18.976   8.623  25.749  1.00  0.00              
ATOM     41  N   ILE   135      20.172   7.285  27.117  1.00  0.00              
ATOM     42  CA  ILE   135      20.132   8.331  28.180  1.00  0.00              
ATOM     43  C   ILE   135      20.834   9.535  27.559  1.00  0.00              
ATOM     44  O   ILE   135      20.283  10.618  27.402  1.00  0.00              
ATOM     45  N   PHE   136      22.070   9.247  27.151  1.00  0.00              
ATOM     46  CA  PHE   136      23.021  10.192  26.624  1.00  0.00              
ATOM     47  C   PHE   136      22.738  10.933  25.338  1.00  0.00              
ATOM     48  O   PHE   136      23.128  12.103  25.252  1.00  0.00              
ATOM     49  N   ASP   137      22.208  10.258  24.347  1.00  0.00              
ATOM     50  CA  ASP   137      21.949  10.798  23.016  1.00  0.00              
ATOM     51  C   ASP   137      20.518  11.176  22.807  1.00  0.00              
ATOM     52  O   ASP   137      20.197  12.089  22.038  1.00  0.00              
ATOM     53  N   LEU   139      19.534  13.313  27.586  1.00  0.00              
ATOM     54  CA  LEU   139      20.435  14.228  28.303  1.00  0.00              
ATOM     55  C   LEU   139      21.113  15.143  27.294  1.00  0.00              
ATOM     56  O   LEU   139      22.320  15.053  27.014  1.00  0.00              
ATOM     57  N   SER   140      20.307  16.050  26.759  1.00  0.00              
ATOM     58  CA  SER   140      20.771  17.021  25.725  1.00  0.00              
ATOM     59  C   SER   140      21.910  17.904  26.209  1.00  0.00              
ATOM     60  O   SER   140      22.853  18.109  25.437  1.00  0.00              
ATOM     61  N   PRO   141      21.825  18.364  27.455  1.00  0.00              
ATOM     62  CA  PRO   141      22.854  19.223  28.019  1.00  0.00              
ATOM     63  C   PRO   141      24.014  18.469  28.645  1.00  0.00              
ATOM     64  O   PRO   141      24.823  19.146  29.314  1.00  0.00              
ATOM     65  N   VAL   142      24.051  17.162  28.557  1.00  0.00              
ATOM     66  CA  VAL   142      25.188  16.397  29.097  1.00  0.00              
ATOM     67  C   VAL   142      25.577  16.516  30.523  1.00  0.00              
ATOM     68  O   VAL   142      26.807  16.523  30.836  1.00  0.00              
ATOM     69  N   ASN   143      24.695  16.529  31.506  1.00  0.00              
ATOM     70  CA  ASN   143      25.141  16.637  32.919  1.00  0.00              
ATOM     71  C   ASN   143      24.925  15.381  33.714  1.00  0.00              
ATOM     72  O   ASN   143      25.135  15.355  34.947  1.00  0.00              
ATOM     73  N   GLY   144      24.535  14.262  33.088  1.00  0.00              
ATOM     74  CA  GLY   144      24.346  12.992  33.741  1.00  0.00              
ATOM     75  C   GLY   144      22.993  12.838  34.394  1.00  0.00              
ATOM     76  O   GLY   144      22.803  11.882  35.183  1.00  0.00              
ATOM     77  N   PHE   145      22.115  13.783  34.097  1.00  0.00              
ATOM     78  CA  PHE   145      20.755  13.819  34.647  1.00  0.00              
ATOM     79  C   PHE   145      19.819  14.327  33.514  1.00  0.00              
ATOM     80  O   PHE   145      20.277  15.173  32.759  1.00  0.00              
ATOM     81  N   LEU   146      18.623  13.815  33.573  1.00  0.00              
ATOM     82  CA  LEU   146      17.506  14.157  32.730  1.00  0.00              
ATOM     83  C   LEU   146      16.722  15.185  33.624  1.00  0.00              
ATOM     84  O   LEU   146      16.496  14.833  34.785  1.00  0.00              
ATOM     85  N   SER   147      16.354  16.296  33.052  1.00  0.00              
ATOM     86  CA  SER   147      15.603  17.344  33.797  1.00  0.00              
ATOM     87  C   SER   147      14.833  18.170  32.782  1.00  0.00              
ATOM     88  O   SER   147      15.326  18.022  31.645  1.00  0.00              
ATOM     89  N   SER   158       6.378  18.388  27.296  1.00  0.00              
ATOM     90  CA  SER   158       5.981  18.597  28.699  1.00  0.00              
ATOM     91  C   SER   158       5.357  17.316  29.250  1.00  0.00              
ATOM     92  O   SER   158       5.688  16.806  30.319  1.00  0.00              
ATOM     93  N   LYS   159       4.451  16.836  28.472  1.00  0.00              
ATOM     94  CA  LYS   159       3.663  15.620  28.618  1.00  0.00              
ATOM     95  C   LYS   159       4.625  14.425  28.624  1.00  0.00              
ATOM     96  O   LYS   159       4.449  13.425  29.322  1.00  0.00              
ATOM     97  N   LEU   160       5.697  14.495  27.846  1.00  0.00              
ATOM     98  CA  LEU   160       6.688  13.418  27.850  1.00  0.00              
ATOM     99  C   LEU   160       7.454  13.467  29.184  1.00  0.00              
ATOM    100  O   LEU   160       7.473  12.427  29.943  1.00  0.00              
ATOM    101  N   PRO   161       8.022  14.576  29.540  1.00  0.00              
ATOM    102  CA  PRO   161       8.776  14.762  30.781  1.00  0.00              
ATOM    103  C   PRO   161       7.959  14.301  32.007  1.00  0.00              
ATOM    104  O   PRO   161       8.437  13.625  32.923  1.00  0.00              
ATOM    105  N   VAL   162       6.700  14.710  31.995  1.00  0.00              
ATOM    106  CA  VAL   162       5.736  14.377  33.037  1.00  0.00              
ATOM    107  C   VAL   162       5.636  12.871  33.192  1.00  0.00              
ATOM    108  O   VAL   162       5.694  12.351  34.311  1.00  0.00              
ATOM    109  N   ASP   163       5.490  12.155  32.098  1.00  0.00              
ATOM    110  CA  ASP   163       5.368  10.683  32.187  1.00  0.00              
ATOM    111  C   ASP   163       6.702  10.076  32.589  1.00  0.00              
ATOM    112  O   ASP   163       6.650   9.034  33.290  1.00  0.00              
ATOM    113  N   ILE   164       7.817  10.631  32.148  1.00  0.00              
ATOM    114  CA  ILE   164       9.101  10.029  32.546  1.00  0.00              
ATOM    115  C   ILE   164       9.321  10.305  34.048  1.00  0.00              
ATOM    116  O   ILE   164       9.589   9.331  34.782  1.00  0.00              
ATOM    117  N   LEU   165       9.267  11.573  34.416  1.00  0.00              
ATOM    118  CA  LEU   165       9.437  12.021  35.808  1.00  0.00              
ATOM    119  C   LEU   165       8.577  11.191  36.764  1.00  0.00              
ATOM    120  O   LEU   165       9.059  10.712  37.806  1.00  0.00              
ATOM    121  N   GLY   166       7.322  11.026  36.464  1.00  0.00              
ATOM    122  CA  GLY   166       6.377  10.260  37.291  1.00  0.00              
ATOM    123  C   GLY   166       6.591   8.779  37.370  1.00  0.00              
ATOM    124  O   GLY   166       5.896   8.044  38.101  1.00  0.00              
ATOM    125  N   ARG   167       7.538   8.228  36.643  1.00  0.00              
ATOM    126  CA  ARG   167       7.840   6.805  36.612  1.00  0.00              
ATOM    127  C   ARG   167       9.240   6.459  37.116  1.00  0.00              
ATOM    128  O   ARG   167       9.459   5.320  37.595  1.00  0.00              
ATOM    129  N   VAL   168      10.143   7.380  36.924  1.00  0.00              
ATOM    130  CA  VAL   168      11.542   7.116  37.259  1.00  0.00              
ATOM    131  C   VAL   168      12.053   7.948  38.395  1.00  0.00              
ATOM    132  O   VAL   168      13.035   7.508  38.983  1.00  0.00              
ATOM    133  N   TRP   169      11.397   9.065  38.683  1.00  0.00              
ATOM    134  CA  TRP   169      11.900   9.891  39.791  1.00  0.00              
ATOM    135  C   TRP   169      11.385   9.322  41.141  1.00  0.00              
ATOM    136  O   TRP   169      10.371   9.804  41.680  1.00  0.00              
ATOM    137  N   MET   179      12.739   9.526  44.330  1.00  0.00              
ATOM    138  CA  MET   179      12.791  10.430  45.470  1.00  0.00              
ATOM    139  C   MET   179      12.191  11.815  45.233  1.00  0.00              
ATOM    140  O   MET   179      12.597  12.753  45.973  1.00  0.00              
ATOM    141  N   LEU   180      11.335  12.001  44.283  1.00  0.00              
ATOM    142  CA  LEU   180      10.675  13.232  43.972  1.00  0.00              
ATOM    143  C   LEU   180      11.401  14.551  43.934  1.00  0.00              
ATOM    144  O   LEU   180      10.742  15.560  44.321  1.00  0.00              
ATOM    145  N   ASP   181      12.586  14.662  43.409  1.00  0.00              
ATOM    146  CA  ASP   181      13.364  15.871  43.228  1.00  0.00              
ATOM    147  C   ASP   181      13.401  16.370  41.771  1.00  0.00              
ATOM    148  O   ASP   181      14.426  17.002  41.429  1.00  0.00              
ATOM    149  N   ARG   182      12.456  16.101  40.918  1.00  0.00              
ATOM    150  CA  ARG   182      12.380  16.523  39.514  1.00  0.00              
ATOM    151  C   ARG   182      13.618  16.324  38.666  1.00  0.00              
ATOM    152  O   ARG   182      13.836  17.052  37.654  1.00  0.00              
ATOM    153  N   ASP   183      14.468  15.426  39.050  1.00  0.00              
ATOM    154  CA  ASP   183      15.696  15.097  38.300  1.00  0.00              
ATOM    155  C   ASP   183      15.628  13.575  38.097  1.00  0.00              
ATOM    156  O   ASP   183      15.306  12.894  39.105  1.00  0.00              
ATOM    157  N   GLU   184      15.834  13.089  36.881  1.00  0.00              
ATOM    158  CA  GLU   184      15.853  11.622  36.712  1.00  0.00              
ATOM    159  C   GLU   184      17.364  11.324  36.611  1.00  0.00              
ATOM    160  O   GLU   184      18.040  11.887  35.721  1.00  0.00              
ATOM    161  N   PHE   185      17.903  10.517  37.523  1.00  0.00              
ATOM    162  CA  PHE   185      19.366  10.261  37.356  1.00  0.00              
ATOM    163  C   PHE   185      19.501   9.013  36.502  1.00  0.00              
ATOM    164  O   PHE   185      18.487   8.348  36.202  1.00  0.00              
ATOM    165  N   ALA   186      20.714   8.708  36.165  1.00  0.00              
ATOM    166  CA  ALA   186      21.106   7.509  35.409  1.00  0.00              
ATOM    167  C   ALA   186      20.595   6.256  36.127  1.00  0.00              
ATOM    168  O   ALA   186      19.946   5.406  35.514  1.00  0.00              
ATOM    169  N   VAL   187      20.935   6.166  37.403  1.00  0.00              
ATOM    170  CA  VAL   187      20.487   5.071  38.280  1.00  0.00              
ATOM    171  C   VAL   187      18.980   4.940  38.282  1.00  0.00              
ATOM    172  O   VAL   187      18.455   3.808  38.120  1.00  0.00              
ATOM    173  N   ALA   188      18.204   6.006  38.422  1.00  0.00              
ATOM    174  CA  ALA   188      16.740   5.844  38.381  1.00  0.00              
ATOM    175  C   ALA   188      16.271   5.454  36.980  1.00  0.00              
ATOM    176  O   ALA   188      15.321   4.651  36.848  1.00  0.00              
ATOM    177  N   MET   189      16.921   5.986  35.967  1.00  0.00              
ATOM    178  CA  MET   189      16.637   5.673  34.568  1.00  0.00              
ATOM    179  C   MET   189      16.982   4.197  34.308  1.00  0.00              
ATOM    180  O   MET   189      16.227   3.528  33.538  1.00  0.00              
ATOM    181  N   PHE   190      18.052   3.723  34.927  1.00  0.00              
ATOM    182  CA  PHE   190      18.446   2.270  34.744  1.00  0.00              
ATOM    183  C   PHE   190      17.328   1.432  35.367  1.00  0.00              
ATOM    184  O   PHE   190      16.708   0.562  34.742  1.00  0.00              
ATOM    185  N   LEU   191      17.027   1.738  36.625  1.00  0.00              
ATOM    186  CA  LEU   191      15.947   1.107  37.396  1.00  0.00              
ATOM    187  C   LEU   191      14.675   1.053  36.620  1.00  0.00              
ATOM    188  O   LEU   191      14.011   0.004  36.624  1.00  0.00              
ATOM    189  N   VAL   192      14.260   2.137  35.984  1.00  0.00              
ATOM    190  CA  VAL   192      13.037   2.182  35.170  1.00  0.00              
ATOM    191  C   VAL   192      13.138   1.130  34.056  1.00  0.00              
ATOM    192  O   VAL   192      12.192   0.363  33.812  1.00  0.00              
ATOM    193  N   TYR   193      14.274   1.073  33.418  1.00  0.00              
ATOM    194  CA  TYR   193      14.456   0.082  32.318  1.00  0.00              
ATOM    195  C   TYR   193      14.490  -1.349  32.786  1.00  0.00              
ATOM    196  O   TYR   193      13.896  -2.219  32.097  1.00  0.00              
ATOM    197  N   CYS   194      15.111  -1.597  33.920  1.00  0.00              
ATOM    198  CA  CYS   194      15.149  -2.973  34.476  1.00  0.00              
ATOM    199  C   CYS   194      13.749  -3.454  34.758  1.00  0.00              
ATOM    200  O   CYS   194      13.451  -4.632  34.537  1.00  0.00              
ATOM    201  N   ALA   195      12.921  -2.539  35.207  1.00  0.00              
ATOM    202  CA  ALA   195      11.490  -2.864  35.522  1.00  0.00              
ATOM    203  C   ALA   195      10.779  -3.196  34.228  1.00  0.00              
ATOM    204  O   ALA   195      10.291  -4.312  34.081  1.00  0.00              
ATOM    205  N   LEU   196      10.712  -2.363  33.199  1.00  0.00              
ATOM    206  CA  LEU   196      10.027  -2.708  31.951  1.00  0.00              
ATOM    207  C   LEU   196      10.622  -3.824  31.127  1.00  0.00              
ATOM    208  O   LEU   196       9.874  -4.489  30.394  1.00  0.00              
ATOM    209  N   GLU   197      11.937  -4.021  31.156  1.00  0.00              
ATOM    210  CA  GLU   197      12.467  -5.134  30.317  1.00  0.00              
ATOM    211  C   GLU   197      11.921  -6.408  30.941  1.00  0.00              
ATOM    212  O   GLU   197      11.479  -7.369  30.304  1.00  0.00              
ATOM    213  N   LYS   198      11.928  -6.373  32.277  1.00  0.00              
ATOM    214  CA  LYS   198      11.463  -7.537  33.056  1.00  0.00              
ATOM    215  C   LYS   198      10.146  -8.081  32.547  1.00  0.00              
ATOM    216  O   LYS   198       9.971  -9.320  32.601  1.00  0.00              
ATOM    217  N   GLU   199       9.262  -7.252  32.034  1.00  0.00              
ATOM    218  CA  GLU   199       7.949  -7.647  31.534  1.00  0.00              
ATOM    219  C   GLU   199       7.367  -6.968  30.309  1.00  0.00              
ATOM    220  O   GLU   199       6.145  -6.675  30.458  1.00  0.00              
ATOM    221  N   PRO   200       7.990  -6.680  29.211  1.00  0.00              
ATOM    222  CA  PRO   200       7.353  -6.040  28.024  1.00  0.00              
ATOM    223  C   PRO   200       7.538  -6.914  26.775  1.00  0.00              
ATOM    224  O   PRO   200       8.567  -7.626  26.715  1.00  0.00              
END
