REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0078AL215_1_5 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : ZHU-JUN 
REMARK  ---------------------------------------------------------- 
TARGET     T0078  
AUTHOR     4070-8855-4894  
METHOD     The target is compared with PDB25 database (U.Hobohm et al., 1992).  
METHOD     For each structure in PDB25, a model is built in the following way:  
METHOD     the sequence (query) is compared with NR database using transitive   
METHOD     BLAST (Neuwald et al. 1997). Similar sequences are collected and   
METHOD     purged at score 150.  Those sequences are aligned with query   
METHOD     sequence using Bayesian aligner (Zhu et al., 1998) and a   
METHOD     profile-like model is built (Lawrence et al. 1993; Gribskov et al.,  
METHOD     1987; unpublished result by Jun Zhu, Roland Luthy and Charlse E.   
METHOD     Lawrence).  Then, the target file is compared with the models   
METHOD     derived from PDB25.  
MODEL     1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 2tys_B 
ATOM      1  N   GLY   186      86.257  11.547  27.802  1.00  0.00              
ATOM      2  CA  GLY   186      87.200  12.587  28.244  1.00  0.00              
ATOM      3  C   GLY   186      87.095  13.779  27.309  1.00  0.00              
ATOM      4  O   GLY   186      86.339  13.715  26.307  1.00  0.00              
ATOM      5  N   SER   187      87.803  14.831  27.633  1.00  0.00              
ATOM      6  CA  SER   187      87.860  16.043  26.811  1.00  0.00              
ATOM      7  C   SER   187      89.326  16.415  26.530  1.00  0.00              
ATOM      8  O   SER   187      90.247  16.081  27.289  1.00  0.00              
ATOM      9  N   VAL   188      89.495  17.091  25.416  1.00  0.00              
ATOM     10  CA  VAL   188      90.785  17.574  24.906  1.00  0.00              
ATOM     11  C   VAL   188      90.578  19.012  24.432  1.00  0.00              
ATOM     12  O   VAL   188      89.613  19.280  23.688  1.00  0.00              
ATOM     13  N   PRO   189      91.451  19.901  24.878  1.00  0.00              
ATOM     14  CA  PRO   189      91.341  21.322  24.542  1.00  0.00              
ATOM     15  C   PRO   189      91.878  21.610  23.131  1.00  0.00              
ATOM     16  O   PRO   189      92.543  20.752  22.543  1.00  0.00              
ATOM     17  N   ASP   190      91.584  22.799  22.667  1.00  0.00              
ATOM     18  CA  ASP   190      92.049  23.313  21.369  1.00  0.00              
ATOM     19  C   ASP   190      93.592  23.161  21.295  1.00  0.00              
ATOM     20  O   ASP   190      94.124  22.660  20.310  1.00  0.00              
ATOM     21  N   ASP   191      94.247  23.676  22.329  1.00  0.00              
ATOM     22  CA  ASP   191      95.721  23.667  22.396  1.00  0.00              
ATOM     23  C   ASP   191      96.292  22.267  22.336  1.00  0.00              
ATOM     24  O   ASP   191      97.328  22.067  21.663  1.00  0.00              
ATOM     25  N   LEU   192      95.671  21.317  22.995  1.00  0.00              
ATOM     26  CA  LEU   192      96.109  19.925  23.003  1.00  0.00              
ATOM     27  C   LEU   192      95.937  19.274  21.640  1.00  0.00              
ATOM     28  O   LEU   192      96.802  18.484  21.210  1.00  0.00              
ATOM     29  N   ARG   193      94.838  19.620  20.976  1.00  0.00              
ATOM     30  CA  ARG   193      94.557  19.086  19.631  1.00  0.00              
ATOM     31  C   ARG   193      95.582  19.630  18.629  1.00  0.00              
ATOM     32  O   ARG   193      96.028  18.864  17.759  1.00  0.00              
ATOM     33  N   VAL   194      95.902  20.901  18.748  1.00  0.00              
ATOM     34  CA  VAL   194      96.870  21.557  17.856  1.00  0.00              
ATOM     35  C   VAL   194      98.234  20.880  17.943  1.00  0.00              
ATOM     36  O   VAL   194      98.887  20.652  16.904  1.00  0.00              
ATOM     37  N   HIS   195      98.651  20.583  19.169  1.00  0.00              
ATOM     38  CA  HIS   195      99.950  19.930  19.376  1.00  0.00              
ATOM     39  C   HIS   195      99.967  18.553  18.754  1.00  0.00              
ATOM     40  O   HIS   195     100.997  18.162  18.168  1.00  0.00              
ATOM     41  N   GLN   196      98.868  17.824  18.890  1.00  0.00              
ATOM     42  CA  GLN   196      98.756  16.475  18.352  1.00  0.00              
ATOM     43  C   GLN   196      98.800  16.537  16.802  1.00  0.00              
ATOM     44  O   GLN   196      99.363  15.620  16.200  1.00  0.00              
ATOM     45  N   TYR   197      98.203  17.575  16.286  1.00  0.00              
ATOM     46  CA  TYR   197      98.149  17.801  14.816  1.00  0.00              
ATOM     47  C   TYR   197      99.590  17.964  14.296  1.00  0.00              
ATOM     48  O   TYR   197     100.027  17.257  13.381  1.00  0.00              
ATOM     49  N   LEU   198     100.274  18.906  14.897  1.00  0.00              
ATOM     50  CA  LEU   198     101.659  19.263  14.603  1.00  0.00              
ATOM     51  C   LEU   198     102.565  18.037  14.655  1.00  0.00              
ATOM     52  O   LEU   198     103.368  17.802  13.738  1.00  0.00              
END
