REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0079AL019_1_2 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : UCSC-COMPBIO 
REMARK  ---------------------------------------------------------- 
TARGET T0079  
AUTHOR 9070-5088-8627  
REMARK   
REMARK Prediction date: Monday June 22, 1998  
REMARK Group name: UCSC-compbio  
REMARK Authors: Christian Barrett, Melissa Cline, Mark Diekens, Leslie Grate,  
REMARK 	 Kevin Karplus, David Haussler and Richard Hughey  
REMARK University of California, Santa Cruz  
REMARK   
METHOD Overview  
METHOD   
METHOD Fold recognition was performed using the Target98 (SAM-T98) method  
METHOD [3] using SAM version 2.1.1 [1], a refinement of the methods developed  
METHOD by this group for CASP2 [2].  This method attempts to find and multiply   
METHOD align a set of homologs to a given sequence, then create an HMM from that   
METHOD multiple alignment.  
METHOD   
METHOD First, a set of sequence weights is determined from the alignment.  Next,   
METHOD Modelfromalign is used to build the model from the alignment and the   
METHOD sequence weights.  Finally, hmmscore performs a local, all-paths scoring   
METHOD of the sequences, using a reversed-sequence normalization feature.  
METHOD   
METHOD The weighting method, detailed in upcoming publications [3,4],  
METHOD combines the Henikoffs' scheme [5], Dirichlet mixtures [6], and an  
METHOD entropy method to set the final weights.  
METHOD   
METHOD Alignment generation  
METHOD   
METHOD The initial step uses BLASTP to search NRP twice: once to produce a set  
METHOD of very close homologs, and once to produce a set of possible homologs.  
METHOD   
METHOD The method then uses multiple iterations of a selection, training, and   
METHOD alignment procedure.  Each iteration involves an initial alignment, a set   
METHOD of search sequences, a threshold value, and a transition regularizer.   
METHOD   
METHOD The first iteration uses a single sequence (or seed alignment) as the   
METHOD initial alignment and the close homologs found by BLASTP are used as the   
METHOD search set.  The threshold is set very strictly, so that only good matches   
METHOD to the sequence are considered.  This iteration uses a transition regularizer   
METHOD that was designed to match the gap costs used by BLASTP.  
METHOD   
METHOD On subsequent iterations the input alignment is the output from the  
METHOD previous iteration, the search set is the larger set of possible  
METHOD homologs found by BLASTP, and the thresholds are gradually loosened.  
METHOD The second through second-from-last iteration use a ``long-match''  
METHOD transition regularizer, and the final iteration uses a transition regularizer   
METHOD trained on FSSP alignments.  
METHOD   
METHOD References  
METHOD [1] R. Hughey and A. Krogh, CABIOS 12(2): 95-107, 1996.  
METHOD     http://www.cse.ucsc.edu/research/compbio/sam.html.    
METHOD [2] K. Karplus, K. Sjolander, C. Barrett, M. Cline, D. Haussler, R.  
METHOD     Hughey, L. Holm, and C. Sander, Proteins: Structure, Function, and   
METHOD     Genetics, Suppl. 1, 134-9, 1997.  
METHOD [3] K. Karplus, C. Barrett, and R. Hughey, Technical Report UCSC-CRL-98-06,  
METHOD     Department of Computer Engineering, Univ. of California, Santa Cruz, 1998.  
METHOD [4] J. Park, K. Karplus, C. Barrett, R. Hughey, D. Haussler, T. Hubbard,  
METHOD     and C. Chothia, http://cyrah.med.harvard.edu/~jong/assess_final.html, 1998.  
METHOD [5] S. Henikoff and J. C. Henikoff, JMB, vol 243, pp 574-578, Nov 1994.  
METHOD [6] K. Sjolander, K. Karplus, M. P. Brown, R. Hughey, A. Krogh, I. S.  
METHOD    Mian, and D. Haussler, CABIOS 12(4):327-345, 1996.  
METHOD   
METHOD   
METHOD We found no close homologs with wu-blast or double-blast, but our  
METHOD method got a fairly strong hit for 1neq (score -9.7, which is the  
METHOD range where only about 25% of the hits are false positives).  Most of  
METHOD the other hits were also to DNA-binding proteins, so we had reasonable  
METHOD confidence in there being a helix-turn-helix domain.  
METHOD   
METHOD We aligned the first half of T0079 to 1neq, and then treated the  
METHOD second half as a separate target.  Somewhat surprisingly, we again had  
METHOD a fairly strong hit on DNA-binding proteins (1san at -8.03, in a range  
METHOD where about 60% of the hits are false positives).  The two  
METHOD domains seem to be too close to bind DNA simultaneously.  
METHOD   
METHOD We hand-edited the alignments to make the domain boundary match up and  
METHOD to improve the alignment to 1san.  We have considerably more  
METHOD confidence in the 1neq alignment than the 1san alignment.  
MODEL 1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1san 
ATOM      1  N   ARG    63      -7.594   3.999   9.389  1.00  0.00              
ATOM      2  CA  ARG    63      -8.182   2.671   9.309  1.00  0.00              
ATOM      3  C   ARG    63      -8.437   2.326   7.843  1.00  0.00              
ATOM      4  O   ARG    63      -8.026   1.258   7.389  1.00  0.00              
ATOM      5  N   LYS    64      -9.092   3.230   7.104  1.00  0.00              
ATOM      6  CA  LYS    64      -9.337   3.040   5.681  1.00  0.00              
ATOM      7  C   LYS    64      -8.037   2.749   4.947  1.00  0.00              
ATOM      8  O   LYS    64      -7.939   1.731   4.274  1.00  0.00              
ATOM      9  N   MET    65      -7.051   3.641   5.061  1.00  0.00              
ATOM     10  CA  MET    65      -5.785   3.487   4.376  1.00  0.00              
ATOM     11  C   MET    65      -5.207   2.098   4.654  1.00  0.00              
ATOM     12  O   MET    65      -4.899   1.355   3.725  1.00  0.00              
ATOM     13  N   THR    66      -5.123   1.719   5.930  1.00  0.00              
ATOM     14  CA  THR    66      -4.663   0.396   6.331  1.00  0.00              
ATOM     15  C   THR    66      -5.508  -0.710   5.664  1.00  0.00              
ATOM     16  O   THR    66      -4.973  -1.710   5.189  1.00  0.00              
ATOM     17  N   GLU    67      -6.838  -0.547   5.641  1.00  0.00              
ATOM     18  CA  GLU    67      -7.764  -1.461   4.975  1.00  0.00              
ATOM     19  C   GLU    67      -7.378  -1.644   3.509  1.00  0.00              
ATOM     20  O   GLU    67      -7.171  -2.765   3.048  1.00  0.00              
ATOM     21  N   ILE    68      -7.300  -0.525   2.789  1.00  0.00              
ATOM     22  CA  ILE    68      -7.032  -0.481   1.367  1.00  0.00              
ATOM     23  C   ILE    68      -5.678  -1.120   1.105  1.00  0.00              
ATOM     24  O   ILE    68      -5.517  -1.877   0.158  1.00  0.00              
ATOM     25  N   ALA    69      -4.705  -0.846   1.969  1.00  0.00              
ATOM     26  CA  ALA    69      -3.404  -1.457   1.880  1.00  0.00              
ATOM     27  C   ALA    69      -3.491  -2.972   1.989  1.00  0.00              
ATOM     28  O   ALA    69      -2.902  -3.668   1.165  1.00  0.00              
ATOM     29  N   GLN    70      -4.209  -3.506   2.979  1.00  0.00              
ATOM     30  CA  GLN    70      -4.281  -4.935   3.155  1.00  0.00              
ATOM     31  C   GLN    70      -5.010  -5.549   1.946  1.00  0.00              
ATOM     32  O   GLN    70      -4.575  -6.543   1.374  1.00  0.00              
ATOM     33  N   LYS    71      -6.099  -4.911   1.513  1.00  0.00              
ATOM     34  CA  LYS    71      -6.820  -5.227   0.283  1.00  0.00              
ATOM     35  C   LYS    71      -5.873  -5.246  -0.924  1.00  0.00              
ATOM     36  O   LYS    71      -5.904  -6.188  -1.717  1.00  0.00              
ATOM     37  N   LEU    72      -5.005  -4.242  -1.059  1.00  0.00              
ATOM     38  CA  LEU    72      -4.045  -4.201  -2.145  1.00  0.00              
ATOM     39  C   LEU    72      -3.050  -5.347  -1.979  1.00  0.00              
ATOM     40  O   LEU    72      -2.681  -5.960  -2.969  1.00  0.00              
ATOM     41  N   LYS    73      -2.622  -5.647  -0.749  1.00  0.00              
ATOM     42  CA  LYS    73      -1.671  -6.715  -0.446  1.00  0.00              
ATOM     43  C   LYS    73      -2.246  -8.092  -0.795  1.00  0.00              
ATOM     44  O   LYS    73      -1.555  -8.957  -1.329  1.00  0.00              
ATOM     45  N   GLU    74      -3.523  -8.297  -0.471  1.00  0.00              
ATOM     46  CA  GLU    74      -4.285  -9.471  -0.856  1.00  0.00              
ATOM     47  C   GLU    74      -4.318  -9.573  -2.384  1.00  0.00              
ATOM     48  O   GLU    74      -3.971 -10.604  -2.955  1.00  0.00              
ATOM     49  N   SER    75      -4.764  -8.495  -3.032  1.00  0.00              
ATOM     50  CA  SER    75      -4.901  -8.393  -4.479  1.00  0.00              
ATOM     51  C   SER    75      -3.581  -8.683  -5.206  1.00  0.00              
ATOM     52  O   SER    75      -3.537  -9.479  -6.142  1.00  0.00              
ATOM     53  N   ASN    76      -2.516  -8.002  -4.788  1.00  0.00              
ATOM     54  CA  ASN    76      -1.197  -8.003  -5.399  1.00  0.00              
ATOM     55  C   ASN    76      -0.129  -7.964  -4.302  1.00  0.00              
ATOM     56  O   ASN    76      -0.286  -7.283  -3.297  1.00  0.00              
ATOM     57  N   PRO    78       1.028  -8.580  -4.553  1.00  0.00              
ATOM     58  CA  PRO    78       2.160  -8.516  -3.644  1.00  0.00              
ATOM     59  C   PRO    78       3.159  -7.386  -3.935  1.00  0.00              
ATOM     60  O   PRO    78       3.798  -6.904  -2.993  1.00  0.00              
ATOM     61  N   ILE    79       3.396  -7.016  -5.199  1.00  0.00              
ATOM     62  CA  ILE    79       4.501  -6.149  -5.575  1.00  0.00              
ATOM     63  C   ILE    79       3.989  -4.954  -6.383  1.00  0.00              
ATOM     64  O   ILE    79       3.515  -5.108  -7.504  1.00  0.00              
ATOM     65  N   LEU    80       4.098  -3.751  -5.816  1.00  0.00              
ATOM     66  CA  LEU    80       3.503  -2.557  -6.383  1.00  0.00              
ATOM     67  C   LEU    80       4.439  -1.860  -7.358  1.00  0.00              
ATOM     68  O   LEU    80       5.399  -1.202  -6.946  1.00  0.00              
ATOM     69  N   TYR    81       4.097  -1.954  -8.640  1.00  0.00              
ATOM     70  CA  TYR    81       4.799  -1.268  -9.714  1.00  0.00              
ATOM     71  C   TYR    81       4.493   0.233  -9.691  1.00  0.00              
ATOM     72  O   TYR    81       3.635   0.697  -8.940  1.00  0.00              
ATOM     73  N   LEU    82       5.214   0.988 -10.523  1.00  0.00              
ATOM     74  CA  LEU    82       5.258   2.446 -10.515  1.00  0.00              
ATOM     75  C   LEU    82       3.837   3.025 -10.526  1.00  0.00              
ATOM     76  O   LEU    82       3.456   3.781  -9.625  1.00  0.00              
ATOM     77  N   ALA    83       3.068   2.699 -11.567  1.00  0.00              
ATOM     78  CA  ALA    83       1.769   3.313 -11.795  1.00  0.00              
ATOM     79  C   ALA    83       0.782   2.911 -10.703  1.00  0.00              
ATOM     80  O   ALA    83       0.154   3.771 -10.089  1.00  0.00              
ATOM     81  N   GLU    84       0.657   1.610 -10.432  1.00  0.00              
ATOM     82  CA  GLU    84      -0.292   1.140  -9.453  1.00  0.00              
ATOM     83  C   GLU    84       0.044   1.706  -8.070  1.00  0.00              
ATOM     84  O   GLU    84      -0.851   2.157  -7.370  1.00  0.00              
ATOM     85  N   ARG    85       1.321   1.745  -7.675  1.00  0.00              
ATOM     86  CA  ARG    85       1.709   2.373  -6.417  1.00  0.00              
ATOM     87  C   ARG    85       1.216   3.816  -6.355  1.00  0.00              
ATOM     88  O   ARG    85       0.733   4.255  -5.316  1.00  0.00              
ATOM     89  N   TYR    86       1.344   4.559  -7.458  1.00  0.00              
ATOM     90  CA  TYR    86       0.806   5.910  -7.517  1.00  0.00              
ATOM     91  C   TYR    86      -0.707   5.877  -7.302  1.00  0.00              
ATOM     92  O   TYR    86      -1.229   6.612  -6.470  1.00  0.00              
ATOM     93  N   GLY    87      -1.415   5.018  -8.033  1.00  0.00              
ATOM     94  CA  GLY    87      -2.848   4.877  -7.940  1.00  0.00              
ATOM     95  C   GLY    87      -3.279   4.621  -6.496  1.00  0.00              
ATOM     96  O   GLY    87      -4.089   5.376  -5.959  1.00  0.00              
ATOM     97  N   PHE    88      -2.753   3.572  -5.851  1.00  0.00              
ATOM     98  CA  PHE    88      -3.093   3.322  -4.463  1.00  0.00              
ATOM     99  C   PHE    88      -2.686   4.535  -3.622  1.00  0.00              
ATOM    100  O   PHE    88      -3.474   4.997  -2.802  1.00  0.00              
ATOM    101  N   GLU    89      -1.495   5.101  -3.834  1.00  0.00              
ATOM    102  CA  GLU    89      -1.079   6.269  -3.076  1.00  0.00              
ATOM    103  C   GLU    89      -2.064   7.426  -3.205  1.00  0.00              
ATOM    104  O   GLU    89      -2.268   8.129  -2.222  1.00  0.00              
ATOM    105  N   SER    90      -2.695   7.609  -4.369  1.00  0.00              
ATOM    106  CA  SER    90      -3.731   8.615  -4.578  1.00  0.00              
ATOM    107  C   SER    90      -4.999   8.214  -3.836  1.00  0.00              
ATOM    108  O   SER    90      -5.550   9.012  -3.083  1.00  0.00              
ATOM    109  N   GLN    91      -5.295   6.406  -1.303  1.00  0.00              
ATOM    110  CA  GLN    91      -5.072   6.576   0.118  1.00  0.00              
ATOM    111  C   GLN    91      -4.962   8.060   0.428  1.00  0.00              
ATOM    112  O   GLN    91      -5.528   8.554   1.399  1.00  0.00              
ATOM    113  N   GLN    92      -4.133   8.721  -0.371  1.00  0.00              
ATOM    114  CA  GLN    92      -3.468   9.981  -0.150  1.00  0.00              
ATOM    115  C   GLN    92      -2.335   9.851   0.872  1.00  0.00              
ATOM    116  O   GLN    92      -2.419  10.310   2.009  1.00  0.00              
ATOM    117  N   THR    93      -1.252   9.202   0.427  1.00  0.00              
ATOM    118  CA  THR    93       0.050   9.168   1.062  1.00  0.00              
ATOM    119  C   THR    93       1.121   9.396  -0.004  1.00  0.00              
ATOM    120  O   THR    93       0.842   9.359  -1.199  1.00  0.00              
ATOM    121  N   LEU    94       2.362   9.615   0.435  1.00  0.00              
ATOM    122  CA  LEU    94       3.432  10.153  -0.399  1.00  0.00              
ATOM    123  C   LEU    94       4.280   9.070  -1.092  1.00  0.00              
ATOM    124  O   LEU    94       5.475   9.288  -1.293  1.00  0.00              
ATOM    125  N   THR    95       3.692   7.926  -1.473  1.00  0.00              
ATOM    126  CA  THR    95       4.306   6.874  -2.299  1.00  0.00              
ATOM    127  C   THR    95       5.333   6.065  -1.495  1.00  0.00              
ATOM    128  O   THR    95       5.135   4.882  -1.214  1.00  0.00              
ATOM    129  N   ARG    96       6.378   6.751  -1.031  1.00  0.00              
ATOM    130  CA  ARG    96       7.433   6.251  -0.158  1.00  0.00              
ATOM    131  C   ARG    96       6.800   5.411   0.947  1.00  0.00              
ATOM    132  O   ARG    96       7.190   4.266   1.177  1.00  0.00              
ATOM    133  N   THR    97       5.806   6.008   1.605  1.00  0.00              
ATOM    134  CA  THR    97       5.075   5.415   2.706  1.00  0.00              
ATOM    135  C   THR    97       4.411   4.103   2.293  1.00  0.00              
ATOM    136  O   THR    97       4.450   3.132   3.040  1.00  0.00              
ATOM    137  N   PHE    98       3.795   4.081   1.111  1.00  0.00              
ATOM    138  CA  PHE    98       3.094   2.915   0.586  1.00  0.00              
ATOM    139  C   PHE    98       4.107   1.811   0.327  1.00  0.00              
ATOM    140  O   PHE    98       3.884   0.669   0.713  1.00  0.00              
ATOM    141  N   LYS    99       5.227   2.148  -0.316  1.00  0.00              
ATOM    142  CA  LYS    99       6.296   1.197  -0.582  1.00  0.00              
ATOM    143  C   LYS    99       6.792   0.580   0.734  1.00  0.00              
ATOM    144  O   LYS    99       6.848  -0.644   0.867  1.00  0.00              
ATOM    145  N   ASN   100       7.145   1.429   1.706  1.00  0.00              
ATOM    146  CA  ASN   100       7.547   1.001   3.043  1.00  0.00              
ATOM    147  C   ASN   100       6.482   0.090   3.654  1.00  0.00              
ATOM    148  O   ASN   100       6.795  -1.024   4.074  1.00  0.00              
ATOM    149  N   TYR   101       5.226   0.544   3.676  1.00  0.00              
ATOM    150  CA  TYR   101       4.128  -0.230   4.222  1.00  0.00              
ATOM    151  C   TYR   101       4.096  -1.605   3.558  1.00  0.00              
ATOM    152  O   TYR   101       4.056  -2.620   4.245  1.00  0.00              
ATOM    153  N   PHE   102       4.157  -1.643   2.226  1.00  0.00              
ATOM    154  CA  PHE   102       4.125  -2.876   1.456  1.00  0.00              
ATOM    155  C   PHE   102       5.262  -3.811   1.835  1.00  0.00              
ATOM    156  O   PHE   102       5.051  -5.019   1.921  1.00  0.00              
ATOM    157  N   ASP   103       6.472  -3.282   2.023  1.00  0.00              
ATOM    158  CA  ASP   103       7.584  -4.132   2.409  1.00  0.00              
ATOM    159  C   ASP   103       7.361  -4.670   3.823  1.00  0.00              
ATOM    160  O   ASP   103       7.373  -5.881   4.041  1.00  0.00              
ATOM    161  N   VAL   104       7.117  -3.776   4.781  1.00  0.00              
ATOM    162  CA  VAL   104       6.918  -4.157   6.175  1.00  0.00              
ATOM    163  C   VAL   104       5.760  -5.147   6.328  1.00  0.00              
ATOM    164  O   VAL   104       5.840  -6.097   7.109  1.00  0.00              
ATOM    165  N   PRO   105       4.700  -4.957   5.539  1.00  0.00              
ATOM    166  CA  PRO   105       3.571  -5.868   5.455  1.00  0.00              
ATOM    167  C   PRO   105       4.032  -7.302   5.229  1.00  0.00              
ATOM    168  O   PRO   105       3.409  -8.202   5.768  1.00  0.00              
ATOM    169  N   PRO   106       5.104  -7.542   4.470  1.00  0.00              
ATOM    170  CA  PRO   106       5.607  -8.898   4.279  1.00  0.00              
ATOM    171  C   PRO   106       6.101  -9.453   5.616  1.00  0.00              
ATOM    172  O   PRO   106       5.758 -10.562   6.032  1.00  0.00              
ATOM    173  N   HIS   107       6.904  -8.655   6.314  1.00  0.00              
ATOM    174  CA  HIS   107       7.527  -9.059   7.549  1.00  0.00              
ATOM    175  C   HIS   107       6.495  -9.226   8.664  1.00  0.00              
ATOM    176  O   HIS   107       6.761  -9.995   9.590  1.00  0.00              
ATOM    177  N   LYS   108       5.339  -8.554   8.576  1.00  0.00              
ATOM    178  CA  LYS   108       4.193  -8.837   9.439  1.00  0.00              
ATOM    179  C   LYS   108       3.014  -9.452   8.667  1.00  0.00              
ATOM    180  O   LYS   108       1.850  -9.226   8.992  1.00  0.00              
ATOM    181  N   TYR   109       3.277 -10.133   7.555  1.00  0.00              
ATOM    182  CA  TYR   109       2.405 -11.128   6.955  1.00  0.00              
ATOM    183  C   TYR   109       2.727 -12.464   7.609  1.00  0.00              
ATOM    184  O   TYR   109       1.883 -13.110   8.237  1.00  0.00              
ATOM    185  N   ARG   110       3.984 -12.876   7.427  1.00  0.00              
ATOM    186  CA  ARG   110       4.384 -14.260   7.623  1.00  0.00              
ATOM    187  C   ARG   110       4.508 -14.660   9.095  1.00  0.00              
ATOM    188  O   ARG   110       4.658 -15.848   9.390  1.00  0.00              
ATOM    189  N   MET   111       4.379 -13.701  10.015  1.00  0.00              
ATOM    190  CA  MET   111       4.317 -13.982  11.449  1.00  0.00              
ATOM    191  C   MET   111       2.874 -13.990  11.965  1.00  0.00              
ATOM    192  O   MET   111       2.638 -14.440  13.084  1.00  0.00              
ATOM    193  N   THR   112       1.911 -13.620  11.119  1.00  0.00              
ATOM    194  CA  THR   112       0.495 -13.581  11.465  1.00  0.00              
ATOM    195  C   THR   112      -0.192 -14.766  10.797  1.00  0.00              
ATOM    196  O   THR   112      -1.046 -15.425  11.385  1.00  0.00              
ATOM    197  N   ASN   113       0.221 -15.054   9.558  1.00  0.00              
ATOM    198  CA  ASN   113      -0.207 -16.192   8.771  1.00  0.00              
ATOM    199  C   ASN   113       0.441 -17.451   9.348  1.00  0.00              
ATOM    200  O   ASN   113       1.310 -18.063   8.730  1.00  0.00              
ATOM    201  N   MET   114       0.025 -17.800  10.564  1.00  0.00              
ATOM    202  CA  MET   114       0.411 -18.988  11.295  1.00  0.00              
ATOM    203  C   MET   114      -0.590 -20.111  10.989  1.00  0.00              
ATOM    204  O   MET   114      -1.443 -19.959  10.111  1.00  0.00              
ATOM    205  N   GLN   115      -0.468 -21.237  11.697  1.00  0.00              
ATOM    206  CA  GLN   115      -1.272 -22.446  11.638  1.00  0.00              
ATOM    207  C   GLN   115      -1.071 -23.156  10.299  1.00  0.00              
ATOM    208  O   GLN   115      -0.568 -24.274  10.250  1.00  0.00              
ATOM    209  N   GLY   116       0.924 -21.333   7.926  1.00  0.00              
ATOM    210  CA  GLY   116       2.297 -20.937   7.670  1.00  0.00              
ATOM    211  C   GLY   116       3.181 -21.156   8.893  1.00  0.00              
ATOM    212  O   GLY   116       3.692 -20.184   9.464  1.00  0.00              
ATOM    213  N   GLU   117       3.360 -22.421   9.281  1.00  0.00              
ATOM    214  CA  GLU   117       4.460 -22.848  10.138  1.00  0.00              
ATOM    215  C   GLU   117       5.740 -23.183   9.357  1.00  0.00              
ATOM    216  O   GLU   117       6.810 -22.706   9.737  1.00  0.00              
ATOM    217  N   SER   118       5.687 -23.996   8.288  1.00  0.00              
ATOM    218  CA  SER   118       6.875 -24.462   7.596  1.00  0.00              
ATOM    219  C   SER   118       7.314 -23.385   6.598  1.00  0.00              
ATOM    220  O   SER   118       7.285 -23.593   5.387  1.00  0.00              
ATOM    221  N   ARG   119       7.697 -22.225   7.134  1.00  0.00              
ATOM    222  CA  ARG   119       7.871 -20.990   6.391  1.00  0.00              
ATOM    223  C   ARG   119       6.780 -20.011   6.815  1.00  0.00              
ATOM    224  O   ARG   119       5.650 -20.418   7.083  1.00  0.00              
END
