REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0079AL156_1_1 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : BENNER-COHEN 
REMARK  ---------------------------------------------------------- 
TARGET T0079  
AUTHOR 5529-3140-9255  
REMARK Prediction team BENNER-COHEN has two group leaders,  
REMARK but we will consistently use Steven Benner's predictor  
REMARK number to avoid confusion concerning a second team  
REMARK connected with Fred Cohen (called Cohen, Fred).  
REMARK (Fred Cohen's number as a group leader is 6140-7890-6093).  
REMARK Prediction team members: D.L.Gerloff, G.Cannarozzi,  
REMARK M.Joachimiak, F.E.Cohen & S.A.Benner.  
REMARK  
REMARK This threading alignment prediction is NOT accompanied by  
REMARK a separate secondary structure submission !!  
REMARK   
METHOD Comments and method remarks will follow. Methods used  
METHOD are similar to what we described in our prediction for  
METHOD T0074.  
METHOD   
MODEL  1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1oct_C 
ATOM      1  N   SER    15     -14.435  43.392  -9.286  1.00  0.00              
ATOM      2  CA  SER    15     -14.131  42.228 -10.109  1.00  0.00              
ATOM      3  C   SER    15     -14.648  40.937  -9.501  1.00  0.00              
ATOM      4  O   SER    15     -15.211  40.094 -10.198  1.00  0.00              
ATOM      5  N   ILE    16     -14.444  40.793  -8.197  1.00  0.00              
ATOM      6  CA  ILE    16     -14.889  39.613  -7.482  1.00  0.00              
ATOM      7  C   ILE    16     -16.379  39.431  -7.739  1.00  0.00              
ATOM      8  O   ILE    16     -16.810  38.389  -8.248  1.00  0.00              
ATOM      9  N   LEU    17     -17.136  40.497  -7.482  1.00  0.00              
ATOM     10  CA  LEU    17     -18.586  40.492  -7.654  1.00  0.00              
ATOM     11  C   LEU    17     -19.065  40.200  -9.076  1.00  0.00              
ATOM     12  O   LEU    17     -19.745  39.192  -9.305  1.00  0.00              
ATOM     13  N   ASP    18     -18.735  41.079 -10.021  1.00  0.00              
ATOM     14  CA  ASP    18     -19.158  40.877 -11.408  1.00  0.00              
ATOM     15  C   ASP    18     -18.796  39.463 -11.838  1.00  0.00              
ATOM     16  O   ASP    18     -19.572  38.794 -12.523  1.00  0.00              
ATOM     17  N   TRP    19     -17.641  38.995 -11.376  1.00  0.00              
ATOM     18  CA  TRP    19     -17.199  37.661 -11.719  1.00  0.00              
ATOM     19  C   TRP    19     -18.198  36.635 -11.226  1.00  0.00              
ATOM     20  O   TRP    19     -18.549  35.716 -11.962  1.00  0.00              
ATOM     21  N   ILE    20     -18.668  36.795  -9.992  1.00  0.00              
ATOM     22  CA  ILE    20     -19.629  35.847  -9.438  1.00  0.00              
ATOM     23  C   ILE    20     -20.896  35.797 -10.294  1.00  0.00              
ATOM     24  O   ILE    20     -21.418  34.716 -10.578  1.00  0.00              
ATOM     25  N   GLU    21     -21.337  36.963 -10.763  1.00  0.00              
ATOM     26  CA  GLU    21     -22.535  37.056 -11.594  1.00  0.00              
ATOM     27  C   GLU    21     -22.327  36.347 -12.916  1.00  0.00              
ATOM     28  O   GLU    21     -22.925  35.300 -13.165  1.00  0.00              
ATOM     29  N   ASP    22     -21.460  36.921 -13.750  1.00  0.00              
ATOM     30  CA  ASP    22     -21.147  36.358 -15.056  1.00  0.00              
ATOM     31  C   ASP    22     -20.975  34.843 -14.975  1.00  0.00              
ATOM     32  O   ASP    22     -21.649  34.098 -15.680  1.00  0.00              
ATOM     33  N   ASN    23     -20.153  34.401 -14.027  1.00  0.00              
ATOM     34  CA  ASN    23     -19.865  32.982 -13.826  1.00  0.00              
ATOM     35  C   ASN    23     -21.096  32.096 -13.702  1.00  0.00              
ATOM     36  O   ASN    23     -21.238  31.097 -14.417  1.00  0.00              
ATOM     37  N   LEU    24     -21.956  32.434 -12.750  1.00  0.00              
ATOM     38  CA  LEU    24     -23.145  31.636 -12.515  1.00  0.00              
ATOM     39  C   LEU    24     -24.154  31.765 -13.646  1.00  0.00              
ATOM     40  O   LEU    24     -24.773  30.772 -14.039  1.00  0.00              
ATOM     41  N   GLU    25     -24.275  32.970 -14.203  1.00  0.00              
ATOM     42  CA  GLU    25     -25.205  33.203 -15.308  1.00  0.00              
ATOM     43  C   GLU    25     -24.838  32.240 -16.426  1.00  0.00              
ATOM     44  O   GLU    25     -25.662  31.433 -16.854  1.00  0.00              
ATOM     45  N   SER    26     -23.556  32.235 -16.781  1.00  0.00              
ATOM     46  CA  SER    26     -23.029  31.376 -17.837  1.00  0.00              
ATOM     47  C   SER    26     -23.164  29.884 -17.532  1.00  0.00              
ATOM     48  O   SER    26     -22.650  29.038 -18.273  1.00  0.00              
ATOM     49  N   PRO    27     -23.848  29.571 -16.435  1.00  0.00              
ATOM     50  CA  PRO    27     -24.054  28.187 -16.058  1.00  0.00              
ATOM     51  C   PRO    27     -22.762  27.489 -15.695  1.00  0.00              
ATOM     52  O   PRO    27     -22.348  26.532 -16.362  1.00  0.00              
ATOM     53  N   LEU    28     -22.106  27.998 -14.656  1.00  0.00              
ATOM     54  CA  LEU    28     -20.854  27.426 -14.188  1.00  0.00              
ATOM     55  C   LEU    28     -20.774  27.452 -12.676  1.00  0.00              
ATOM     56  O   LEU    28     -20.927  28.502 -12.049  1.00  0.00              
ATOM     57  N   SER    29     -20.590  26.271 -12.104  1.00  0.00              
ATOM     58  CA  SER    29     -20.449  26.119 -10.671  1.00  0.00              
ATOM     59  C   SER    29     -19.003  26.492 -10.371  1.00  0.00              
ATOM     60  O   SER    29     -18.169  26.531 -11.277  1.00  0.00              
ATOM     61  N   LEU    30     -18.697  26.768  -9.110  1.00  0.00              
ATOM     62  CA  LEU    30     -17.330  27.100  -8.734  1.00  0.00              
ATOM     63  C   LEU    30     -16.479  25.877  -9.023  1.00  0.00              
ATOM     64  O   LEU    30     -15.297  25.998  -9.323  1.00  0.00              
ATOM     65  N   GLU    31     -17.105  24.703  -8.945  1.00  0.00              
ATOM     66  CA  GLU    31     -16.417  23.449  -9.202  1.00  0.00              
ATOM     67  C   GLU    31     -15.898  23.344 -10.623  1.00  0.00              
ATOM     68  O   GLU    31     -14.785  22.863 -10.850  1.00  0.00              
ATOM     69  N   LYS    32     -16.712  23.777 -11.584  1.00  0.00              
ATOM     70  CA  LYS    32     -16.310  23.752 -12.988  1.00  0.00              
ATOM     71  C   LYS    32     -15.209  24.786 -13.136  1.00  0.00              
ATOM     72  O   LYS    32     -14.072  24.452 -13.474  1.00  0.00              
ATOM     73  N   VAL    33     -15.555  26.031 -12.809  1.00  0.00              
ATOM     74  CA  VAL    33     -14.641  27.163 -12.887  1.00  0.00              
ATOM     75  C   VAL    33     -13.252  26.817 -12.378  1.00  0.00              
ATOM     76  O   VAL    33     -12.248  27.213 -12.966  1.00  0.00              
ATOM     77  N   SER    34     -13.198  26.073 -11.283  1.00  0.00              
ATOM     78  CA  SER    34     -11.915  25.695 -10.733  1.00  0.00              
ATOM     79  C   SER    34     -11.177  24.780 -11.683  1.00  0.00              
ATOM     80  O   SER    34     -10.095  25.114 -12.163  1.00  0.00              
ATOM     81  N   GLU    35     -11.818  23.665 -12.021  1.00  0.00              
ATOM     82  CA  GLU    35     -11.233  22.660 -12.905  1.00  0.00              
ATOM     83  C   GLU    35     -11.023  23.095 -14.359  1.00  0.00              
ATOM     84  O   GLU    35     -10.223  22.486 -15.082  1.00  0.00              
ATOM     85  N   ARG    36     -11.719  24.152 -14.780  1.00  0.00              
ATOM     86  CA  ARG    36     -11.583  24.662 -16.143  1.00  0.00              
ATOM     87  C   ARG    36     -10.184  25.236 -16.265  1.00  0.00              
ATOM     88  O   ARG    36      -9.485  25.017 -17.255  1.00  0.00              
ATOM     89  N   SER    37      -9.765  25.933 -15.217  1.00  0.00              
ATOM     90  CA  SER    37      -8.439  26.520 -15.176  1.00  0.00              
ATOM     91  C   SER    37      -7.420  25.393 -15.114  1.00  0.00              
ATOM     92  O   SER    37      -6.236  25.590 -15.402  1.00  0.00              
ATOM     93  N   GLY    38      -5.025  22.914 -11.120  1.00  0.00              
ATOM     94  CA  GLY    38      -6.443  23.194 -11.017  1.00  0.00              
ATOM     95  C   GLY    38      -6.678  23.826  -9.658  1.00  0.00              
ATOM     96  O   GLY    38      -5.826  23.733  -8.768  1.00  0.00              
ATOM     97  N   TYR    39      -7.820  24.481  -9.505  1.00  0.00              
ATOM     98  CA  TYR    39      -8.152  25.117  -8.246  1.00  0.00              
ATOM     99  C   TYR    39      -9.435  24.558  -7.691  1.00  0.00              
ATOM    100  O   TYR    39     -10.467  24.605  -8.346  1.00  0.00              
ATOM    101  N   SER    40      -9.360  24.003  -6.487  1.00  0.00              
ATOM    102  CA  SER    40     -10.527  23.424  -5.841  1.00  0.00              
ATOM    103  C   SER    40     -11.650  24.443  -5.741  1.00  0.00              
ATOM    104  O   SER    40     -11.432  25.655  -5.838  1.00  0.00              
ATOM    105  N   LYS    41     -12.854  23.930  -5.538  1.00  0.00              
ATOM    106  CA  LYS    41     -14.035  24.764  -5.406  1.00  0.00              
ATOM    107  C   LYS    41     -13.859  25.726  -4.237  1.00  0.00              
ATOM    108  O   LYS    41     -14.282  26.883  -4.295  1.00  0.00              
ATOM    109  N   TRP    42     -13.183  25.239  -3.200  1.00  0.00              
ATOM    110  CA  TRP    42     -12.918  26.015  -1.997  1.00  0.00              
ATOM    111  C   TRP    42     -12.244  27.350  -2.308  1.00  0.00              
ATOM    112  O   TRP    42     -12.728  28.398  -1.890  1.00  0.00              
ATOM    113  N   HIS    43     -11.153  27.312  -3.070  1.00  0.00              
ATOM    114  CA  HIS    43     -10.430  28.529  -3.425  1.00  0.00              
ATOM    115  C   HIS    43     -11.306  29.490  -4.211  1.00  0.00              
ATOM    116  O   HIS    43     -11.250  30.703  -4.005  1.00  0.00              
ATOM    117  N   LEU    44     -12.130  28.934  -5.092  1.00  0.00              
ATOM    118  CA  LEU    44     -13.013  29.738  -5.923  1.00  0.00              
ATOM    119  C   LEU    44     -14.036  30.445  -5.056  1.00  0.00              
ATOM    120  O   LEU    44     -14.241  31.651  -5.172  1.00  0.00              
ATOM    121  N   GLN    45     -14.650  29.679  -4.164  1.00  0.00              
ATOM    122  CA  GLN    45     -15.654  30.201  -3.253  1.00  0.00              
ATOM    123  C   GLN    45     -15.070  31.316  -2.417  1.00  0.00              
ATOM    124  O   GLN    45     -15.642  32.396  -2.328  1.00  0.00              
ATOM    125  N   ARG    46     -13.913  31.047  -1.824  1.00  0.00              
ATOM    126  CA  ARG    46     -13.243  32.026  -0.987  1.00  0.00              
ATOM    127  C   ARG    46     -12.879  33.276  -1.746  1.00  0.00              
ATOM    128  O   ARG    46     -12.929  34.369  -1.189  1.00  0.00              
ATOM    129  N   MET    47     -12.508  33.124  -3.014  1.00  0.00              
ATOM    130  CA  MET    47     -12.146  34.288  -3.810  1.00  0.00              
ATOM    131  C   MET    47     -13.381  35.145  -4.025  1.00  0.00              
ATOM    132  O   MET    47     -13.314  36.371  -3.967  1.00  0.00              
ATOM    133  N   PHE    48     -14.511  34.491  -4.258  1.00  0.00              
ATOM    134  CA  PHE    48     -15.749  35.207  -4.483  1.00  0.00              
ATOM    135  C   PHE    48     -16.188  35.945  -3.236  1.00  0.00              
ATOM    136  O   PHE    48     -16.604  37.098  -3.301  1.00  0.00              
ATOM    137  N   LYS    49     -16.050  35.289  -2.094  1.00  0.00              
ATOM    138  CA  LYS    49     -16.441  35.879  -0.824  1.00  0.00              
ATOM    139  C   LYS    49     -15.400  36.843  -0.263  1.00  0.00              
ATOM    140  O   LYS    49     -15.564  37.351   0.849  1.00  0.00              
ATOM    141  N   LYS    50     -14.345  37.107  -1.035  1.00  0.00              
ATOM    142  CA  LYS    50     -13.259  37.989  -0.603  1.00  0.00              
ATOM    143  C   LYS    50     -12.647  37.485   0.694  1.00  0.00              
ATOM    144  O   LYS    50     -12.163  38.262   1.512  1.00  0.00              
ATOM    145  N   GLU    51     -12.685  36.170   0.866  1.00  0.00              
ATOM    146  CA  GLU    51     -12.160  35.516   2.048  1.00  0.00              
ATOM    147  C   GLU    51     -10.729  35.015   1.825  1.00  0.00              
ATOM    148  O   GLU    51     -10.418  33.844   2.057  1.00  0.00              
ATOM    149  N   THR    52      -9.863  35.910   1.358  1.00  0.00              
ATOM    150  CA  THR    52      -8.457  35.585   1.112  1.00  0.00              
ATOM    151  C   THR    52      -7.599  36.822   1.346  1.00  0.00              
ATOM    152  O   THR    52      -8.112  37.934   1.465  1.00  0.00              
ATOM    153  N   GLY    53      -6.289  36.619   1.428  1.00  0.00              
ATOM    154  CA  GLY    53      -5.361  37.716   1.652  1.00  0.00              
ATOM    155  C   GLY    53      -5.329  38.623   0.441  1.00  0.00              
ATOM    156  O   GLY    53      -5.494  38.176  -0.690  1.00  0.00              
ATOM    157  N   HIS    54      -5.099  39.902   0.688  1.00  0.00              
ATOM    158  CA  HIS    54      -5.033  40.881  -0.376  1.00  0.00              
ATOM    159  C   HIS    54      -4.101  40.431  -1.494  1.00  0.00              
ATOM    160  O   HIS    54      -4.406  40.609  -2.665  1.00  0.00              
ATOM    161  N   SER    55      -2.979  39.826  -1.120  1.00  0.00              
ATOM    162  CA  SER    55      -2.002  39.350  -2.091  1.00  0.00              
ATOM    163  C   SER    55      -2.549  38.213  -2.934  1.00  0.00              
ATOM    164  O   SER    55      -2.440  38.228  -4.154  1.00  0.00              
END
