REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0080AL215_1_1 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : ZHU-JUN 
REMARK  ---------------------------------------------------------- 
TARGET     T0080  
AUTHOR     4070-8855-4894  
METHOD     The target is compared with PDB25 database (U.Hobohm et al., 1992).  
METHOD     For each structure in PDB25, a model is built in the following way:  
METHOD     the sequence (query) is compared with NR database using transitive   
METHOD     BLAST (Neuwald et al. 1997). Similar sequences are collected and   
METHOD     purged at score 150.  Those sequences are aligned with query   
METHOD     sequence using Bayesian aligner (Zhu et al., 1998) and a   
METHOD     profile-like model is built (Lawrence et al. 1993; Gribskov et al.,  
METHOD     1987; unpublished result by Jun Zhu, Roland Luthy and Charlse E.   
METHOD     Lawrence).  Then, the target file is compared with the models   
METHOD     derived from PDB25.  
MODEL     1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1bcp_B 
ATOM      1  N   GLN   105      -0.712  24.968  27.359  1.00  0.00              
ATOM      2  CA  GLN   105      -0.230  25.793  26.254  1.00  0.00              
ATOM      3  C   GLN   105       0.927  25.189  25.462  1.00  0.00              
ATOM      4  O   GLN   105       1.599  24.228  25.883  1.00  0.00              
ATOM      5  N   VAL   106       1.223  25.783  24.329  1.00  0.00              
ATOM      6  CA  VAL   106       2.263  25.187  23.528  1.00  0.00              
ATOM      7  C   VAL   106       3.511  25.993  23.374  1.00  0.00              
ATOM      8  O   VAL   106       3.480  27.226  23.353  1.00  0.00              
ATOM      9  N   LEU   107       4.638  25.286  23.303  1.00  0.00              
ATOM     10  CA  LEU   107       6.007  25.770  23.155  1.00  0.00              
ATOM     11  C   LEU   107       6.420  26.148  21.738  1.00  0.00              
ATOM     12  O   LEU   107       5.864  25.677  20.741  1.00  0.00              
ATOM     13  N   VAL   108       7.479  26.938  21.665  1.00  0.00              
ATOM     14  CA  VAL   108       8.044  27.396  20.394  1.00  0.00              
ATOM     15  C   VAL   108       7.023  28.063  19.495  1.00  0.00              
ATOM     16  O   VAL   108       7.301  28.234  18.320  1.00  0.00              
ATOM     17  N   ARG   109       5.841  28.365  20.018  1.00  0.00              
ATOM     18  CA  ARG   109       4.807  28.993  19.224  1.00  0.00              
ATOM     19  C   ARG   109       4.060  27.978  18.385  1.00  0.00              
ATOM     20  O   ARG   109       3.101  28.312  17.684  1.00  0.00              
ATOM     21  N   ARG   110       4.431  26.718  18.525  1.00  0.00              
ATOM     22  CA  ARG   110       3.808  25.695  17.736  1.00  0.00              
ATOM     23  C   ARG   110       2.564  25.142  18.355  1.00  0.00              
ATOM     24  O   ARG   110       2.592  24.101  19.011  1.00  0.00              
ATOM     25  N   LEU   111       1.463  25.851  18.159  1.00  0.00              
ATOM     26  CA  LEU   111       0.188  25.363  18.663  1.00  0.00              
ATOM     27  C   LEU   111       0.033  24.013  18.006  1.00  0.00              
ATOM     28  O   LEU   111       0.533  23.804  16.908  1.00  0.00              
ATOM     29  N   PRO   112      -0.578  23.057  18.671  1.00  0.00              
ATOM     30  CA  PRO   112      -0.691  21.748  18.030  1.00  0.00              
ATOM     31  C   PRO   112      -1.641  21.737  16.857  1.00  0.00              
ATOM     32  O   PRO   112      -2.426  22.670  16.638  1.00  0.00              
ATOM     33  N   ASN   113      -1.617  20.624  16.145  1.00  0.00              
ATOM     34  CA  ASN   113      -2.471  20.448  14.985  1.00  0.00              
ATOM     35  C   ASN   113      -3.932  20.445  15.380  1.00  0.00              
ATOM     36  O   ASN   113      -4.315  19.846  16.366  1.00  0.00              
ATOM     37  N   GLY   114      -4.764  21.072  14.568  1.00  0.00              
ATOM     38  CA  GLY   114      -6.193  21.140  14.836  1.00  0.00              
ATOM     39  C   GLY   114      -6.522  22.100  15.957  1.00  0.00              
ATOM     40  O   GLY   114      -7.656  22.093  16.429  1.00  0.00              
ATOM     41  N   THR   115      -5.553  22.926  16.366  1.00  0.00              
ATOM     42  CA  THR   115      -5.744  23.945  17.405  1.00  0.00              
ATOM     43  C   THR   115      -4.961  25.151  16.906  1.00  0.00              
ATOM     44  O   THR   115      -4.070  24.976  16.099  1.00  0.00              
ATOM     45  N   GLU   116      -5.219  26.347  17.408  1.00  0.00              
ATOM     46  CA  GLU   116      -4.515  27.530  16.931  1.00  0.00              
ATOM     47  C   GLU   116      -4.421  28.619  17.993  1.00  0.00              
ATOM     48  O   GLU   116      -5.281  28.718  18.855  1.00  0.00              
END
