REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0080AL215_1_3 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : ZHU-JUN 
REMARK  ---------------------------------------------------------- 
TARGET     T0080  
AUTHOR     4070-8855-4894  
METHOD     The target is compared with PDB25 database (U.Hobohm et al., 1992).  
METHOD     For each structure in PDB25, a model is built in the following way:  
METHOD     the sequence (query) is compared with NR database using transitive   
METHOD     BLAST (Neuwald et al. 1997). Similar sequences are collected and   
METHOD     purged at score 150.  Those sequences are aligned with query   
METHOD     sequence using Bayesian aligner (Zhu et al., 1998) and a   
METHOD     profile-like model is built (Lawrence et al. 1993; Gribskov et al.,  
METHOD     1987; unpublished result by Jun Zhu, Roland Luthy and Charlse E.   
METHOD     Lawrence).  Then, the target file is compared with the models   
METHOD     derived from PDB25.  
MODEL     1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1bcp_B 
ATOM      1  N   GLN   195     -18.677  21.017  18.321  1.00  0.00              
ATOM      2  CA  GLN   195     -19.836  20.303  17.866  1.00  0.00              
ATOM      3  C   GLN   195     -20.999  21.089  18.288  1.00  0.00              
ATOM      4  O   GLN   195     -21.532  20.866  19.363  1.00  0.00              
ATOM      5  N   LEU   196     -21.449  21.985  17.433  1.00  0.00              
ATOM      6  CA  LEU   196     -22.560  22.838  17.774  1.00  0.00              
ATOM      7  C   LEU   196     -23.781  22.175  18.399  1.00  0.00              
ATOM      8  O   LEU   196     -24.441  22.773  19.264  1.00  0.00              
ATOM      9  N   ARG   197     -24.058  20.935  18.007  1.00  0.00              
ATOM     10  CA  ARG   197     -25.205  20.247  18.575  1.00  0.00              
ATOM     11  C   ARG   197     -26.516  20.614  17.871  1.00  0.00              
ATOM     12  O   ARG   197     -27.563  19.992  18.125  1.00  0.00              
ATOM     13  N   SER   198     -26.498  21.623  16.995  1.00  0.00              
ATOM     14  CA  SER   198     -27.720  21.973  16.298  1.00  0.00              
ATOM     15  C   SER   198     -28.127  20.818  15.369  1.00  0.00              
ATOM     16  O   SER   198     -27.388  19.809  15.228  1.00  0.00              
ATOM     17  N   THR   199     -29.347  20.885  14.795  1.00  0.00              
ATOM     18  CA  THR   199     -29.762  19.796  13.896  1.00  0.00              
ATOM     19  C   THR   199     -29.147  20.031  12.509  1.00  0.00              
ATOM     20  O   THR   199     -28.874  21.184  12.097  1.00  0.00              
ATOM     21  N   LEU   200     -28.936  18.938  11.790  1.00  0.00              
ATOM     22  CA  LEU   200     -28.343  18.999  10.457  1.00  0.00              
ATOM     23  C   LEU   200     -29.295  19.513   9.370  1.00  0.00              
ATOM     24  O   LEU   200     -29.482  18.864   8.336  1.00  0.00              
ATOM     25  N   ARG   201     -29.941  20.647   9.596  1.00  0.00              
ATOM     26  CA  ARG   201     -30.808  21.151   8.546  1.00  0.00              
ATOM     27  C   ARG   201     -29.875  21.894   7.618  1.00  0.00              
ATOM     28  O   ARG   201     -28.753  22.232   7.989  1.00  0.00              
ATOM     29  N   LYS   202     -30.372  22.193   6.436  1.00  0.00              
ATOM     30  CA  LYS   202     -29.597  22.874   5.406  1.00  0.00              
ATOM     31  C   LYS   202     -29.660  24.381   5.591  1.00  0.00              
ATOM     32  O   LYS   202     -30.672  24.912   6.022  1.00  0.00              
ATOM     33  N   GLY   203     -28.585  25.065   5.271  1.00  0.00              
ATOM     34  CA  GLY   203     -28.593  26.513   5.337  1.00  0.00              
ATOM     35  C   GLY   203     -27.842  26.896   4.109  1.00  0.00              
ATOM     36  O   GLY   203     -26.802  26.344   3.866  1.00  0.00              
ATOM     37  N   THR   204     -28.335  27.838   3.332  1.00  0.00              
ATOM     38  CA  THR   204     -27.625  28.203   2.134  1.00  0.00              
ATOM     39  C   THR   204     -27.513  29.694   2.073  1.00  0.00              
ATOM     40  O   THR   204     -28.285  30.397   2.701  1.00  0.00              
ATOM     41  N   ALA   205     -26.513  30.168   1.350  1.00  0.00              
ATOM     42  CA  ALA   205     -26.271  31.597   1.169  1.00  0.00              
ATOM     43  C   ALA   205     -26.067  31.765  -0.333  1.00  0.00              
ATOM     44  O   ALA   205     -25.247  31.087  -0.941  1.00  0.00              
ATOM     45  N   SER   206     -26.850  32.642  -0.928  1.00  0.00              
ATOM     46  CA  SER   206     -26.811  32.835  -2.343  1.00  0.00              
ATOM     47  C   SER   206     -25.925  33.973  -2.743  1.00  0.00              
ATOM     48  O   SER   206     -25.534  34.765  -1.904  1.00  0.00              
ATOM     49  N   ARG   207     -25.536  33.979  -4.019  1.00  0.00              
ATOM     50  CA  ARG   207     -24.673  34.994  -4.624  1.00  0.00              
ATOM     51  C   ARG   207     -23.273  35.120  -4.025  1.00  0.00              
ATOM     52  O   ARG   207     -22.515  36.011  -4.366  1.00  0.00              
ATOM     53  N   VAL   208     -22.883  34.167  -3.208  1.00  0.00              
ATOM     54  CA  VAL   208     -21.561  34.231  -2.588  1.00  0.00              
ATOM     55  C   VAL   208     -20.367  33.883  -3.491  1.00  0.00              
ATOM     56  O   VAL   208     -20.512  33.206  -4.505  1.00  0.00              
ATOM     57  N   LEU   209     -19.187  34.329  -3.086  1.00  0.00              
ATOM     58  CA  LEU   209     -17.942  34.106  -3.822  1.00  0.00              
ATOM     59  C   LEU   209     -16.788  33.658  -2.937  1.00  0.00              
ATOM     60  O   LEU   209     -16.194  34.490  -2.256  1.00  0.00              
ATOM     61  N   LYS   210     -16.410  32.387  -2.995  1.00  0.00              
ATOM     62  CA  LYS   210     -15.304  31.899  -2.169  1.00  0.00              
ATOM     63  C   LYS   210     -14.017  32.753  -2.260  1.00  0.00              
ATOM     64  O   LYS   210     -13.546  33.062  -3.347  1.00  0.00              
ATOM     65  N   ASP   211     -13.498  33.167  -1.108  1.00  0.00              
ATOM     66  CA  ASP   211     -12.279  33.952  -1.034  1.00  0.00              
ATOM     67  C   ASP   211     -11.500  33.584   0.222  1.00  0.00              
ATOM     68  O   ASP   211     -11.876  32.651   0.939  1.00  0.00              
ATOM     69  N   ARG   212     -10.352  34.244   0.398  1.00  0.00              
ATOM     70  CA  ARG   212      -9.481  34.098   1.561  1.00  0.00              
ATOM     71  C   ARG   212      -9.278  32.657   2.015  1.00  0.00              
ATOM     72  O   ARG   212      -9.678  32.276   3.074  1.00  0.00              
ATOM     73  N   GLU   213      -8.595  31.862   1.219  1.00  0.00              
ATOM     74  CA  GLU   213      -8.384  30.459   1.544  1.00  0.00              
ATOM     75  C   GLU   213      -7.490  30.209   2.760  1.00  0.00              
ATOM     76  O   GLU   213      -6.476  30.895   2.924  1.00  0.00              
ATOM     77  N   LEU   214      -7.846  29.209   3.576  1.00  0.00              
ATOM     78  CA  LEU   214      -7.075  28.827   4.778  1.00  0.00              
ATOM     79  C   LEU   214      -6.845  27.332   4.841  1.00  0.00              
ATOM     80  O   LEU   214      -7.750  26.550   4.611  1.00  0.00              
ATOM     81  N   CYS   215      -5.642  26.936   5.201  1.00  0.00              
ATOM     82  CA  CYS   215      -5.346  25.536   5.324  1.00  0.00              
ATOM     83  C   CYS   215      -4.342  25.356   6.442  1.00  0.00              
ATOM     84  O   CYS   215      -3.706  26.320   6.890  1.00  0.00              
ATOM     85  N   SER   216      -4.196  24.104   6.864  1.00  0.00              
ATOM     86  CA  SER   216      -3.322  23.734   7.958  1.00  0.00              
ATOM     87  C   SER   216      -3.114  22.227   7.992  1.00  0.00              
ATOM     88  O   SER   216      -3.948  21.452   7.556  1.00  0.00              
ATOM     89  N   GLY   217      -2.013  21.821   8.583  1.00  0.00              
ATOM     90  CA  GLY   217      -1.660  20.429   8.680  1.00  0.00              
ATOM     91  C   GLY   217      -2.746  19.613   9.327  1.00  0.00              
ATOM     92  O   GLY   217      -3.256  19.980  10.340  1.00  0.00              
ATOM     93  N   PRO   218      -3.100  18.498   8.731  1.00  0.00              
ATOM     94  CA  PRO   218      -4.144  17.616   9.254  1.00  0.00              
ATOM     95  C   PRO   218      -5.415  18.260   9.694  1.00  0.00              
ATOM     96  O   PRO   218      -6.140  17.709  10.514  1.00  0.00              
ATOM     97  N   SER   219      -5.700  19.434   9.171  1.00  0.00              
ATOM     98  CA  SER   219      -6.932  20.041   9.550  1.00  0.00              
ATOM     99  C   SER   219      -7.842  20.200   8.340  1.00  0.00              
ATOM    100  O   SER   219      -7.915  19.310   7.493  1.00  0.00              
ATOM    101  N   LYS   220      -8.519  21.339   8.251  1.00  0.00              
ATOM    102  CA  LYS   220      -9.476  21.558   7.210  1.00  0.00              
ATOM    103  C   LYS   220      -9.087  22.734   6.348  1.00  0.00              
ATOM    104  O   LYS   220      -8.252  23.549   6.774  1.00  0.00              
ATOM    105  N   LEU   221      -9.671  22.762   5.130  1.00  0.00              
ATOM    106  CA  LEU   221      -9.505  23.795   4.092  1.00  0.00              
ATOM    107  C   LEU   221     -10.792  24.588   4.138  1.00  0.00              
ATOM    108  O   LEU   221     -11.874  24.015   4.070  1.00  0.00              
ATOM    109  N   CYS   222     -10.663  25.901   4.272  1.00  0.00              
ATOM    110  CA  CYS   222     -11.806  26.804   4.407  1.00  0.00              
ATOM    111  C   CYS   222     -11.731  27.956   3.460  1.00  0.00              
ATOM    112  O   CYS   222     -10.668  28.284   2.943  1.00  0.00              
ATOM    113  N   GLN   223     -12.852  28.638   3.332  1.00  0.00              
ATOM    114  CA  GLN   223     -12.909  29.812   2.526  1.00  0.00              
ATOM    115  C   GLN   223     -13.957  30.690   3.137  1.00  0.00              
ATOM    116  O   GLN   223     -14.819  30.218   3.845  1.00  0.00              
ATOM    117  N   ALA   224     -13.793  31.984   2.931  1.00  0.00              
ATOM    118  CA  ALA   224     -14.707  33.013   3.381  1.00  0.00              
ATOM    119  C   ALA   224     -15.508  33.404   2.121  1.00  0.00              
ATOM    120  O   ALA   224     -14.924  33.845   1.134  1.00  0.00              
ATOM    121  N   LEU   225     -16.818  33.182   2.124  1.00  0.00              
ATOM    122  CA  LEU   225     -17.650  33.518   1.001  1.00  0.00              
ATOM    123  C   LEU   225     -18.157  34.913   1.181  1.00  0.00              
ATOM    124  O   LEU   225     -18.941  35.143   2.067  1.00  0.00              
ATOM    125  N   ALA   226     -17.726  35.858   0.368  1.00  0.00              
ATOM    126  CA  ALA   226     -18.205  37.229   0.526  1.00  0.00              
ATOM    127  C   ALA   226     -19.382  37.564  -0.389  1.00  0.00              
ATOM    128  O   ALA   226     -19.769  36.782  -1.257  1.00  0.00              
END
