REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0081AL019_1 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : UCSC-COMPBIO 
REMARK  ---------------------------------------------------------- 
TARGET T0081  
AUTHOR 9070-5088-8627  
REMARK   
REMARK Prediction date: Monday June 22, 1998  
REMARK Group name: UCSC-compbio  
REMARK Authors: Christian Barrett, Melissa Cline, Mark Diekens, Leslie Grate,  
REMARK 	 Kevin Karplus, David Haussler and Richard Hughey  
REMARK University of California, Santa Cruz  
REMARK   
METHOD Overview  
METHOD   
METHOD Fold recognition was performed using the Target98 (SAM-T98) method  
METHOD [3] using SAM version 2.1.1 [1], a refinement of the methods developed  
METHOD by this group for CASP2 [2].  This method attempts to find and multiply   
METHOD align a set of homologs to a given sequence, then create an HMM from that   
METHOD multiple alignment.  
METHOD   
METHOD First, a set of sequence weights is determined from the alignment.  Next,   
METHOD Modelfromalign is used to build the model from the alignment and the   
METHOD sequence weights.  Finally, hmmscore performs a local, all-paths scoring   
METHOD of the sequences, using a reversed-sequence normalization feature.  
METHOD   
METHOD The weighting method, detailed in upcoming publications [3,4],  
METHOD combines the Henikoffs' scheme [5], Dirichlet mixtures [6], and an  
METHOD entropy method to set the final weights.  
METHOD   
METHOD Alignment generation  
METHOD   
METHOD The initial step uses BLASTP to search NRP twice: once to produce a set  
METHOD of very close homologs, and once to produce a set of possible homologs.  
METHOD   
METHOD The method then uses multiple iterations of a selection, training, and   
METHOD alignment procedure.  Each iteration involves an initial alignment, a set   
METHOD of search sequences, a threshold value, and a transition regularizer.   
METHOD   
METHOD The first iteration uses a single sequence (or seed alignment) as the   
METHOD initial alignment and the close homologs found by BLASTP are used as the   
METHOD search set.  The threshold is set very strictly, so that only good matches   
METHOD to the sequence are considered.  This iteration uses a transition regularizer   
METHOD that was designed to match the gap costs used by BLASTP.  
METHOD   
METHOD On subsequent iterations the input alignment is the output from the  
METHOD previous iteration, the search set is the larger set of possible  
METHOD homologs found by BLASTP, and the thresholds are gradually loosened.  
METHOD The second through second-from-last iteration use a ``long-match''  
METHOD transition regularizer, and the final iteration uses a transition regularizer   
METHOD trained on FSSP alignments.  
METHOD   
METHOD References  
METHOD [1] R. Hughey and A. Krogh, CABIOS 12(2): 95-107, 1996.  
METHOD     http://www.cse.ucsc.edu/research/compbio/sam.html.    
METHOD [2] K. Karplus, K. Sjolander, C. Barrett, M. Cline, D. Haussler, R.  
METHOD     Hughey, L. Holm, and C. Sander, Proteins: Structure, Function, and   
METHOD     Genetics, Suppl. 1, 134-9, 1997.  
METHOD [3] K. Karplus, C. Barrett, and R. Hughey, Technical Report UCSC-CRL-98-06,  
METHOD     Department of Computer Engineering, Univ. of California, Santa Cruz, 1998.  
METHOD [4] J. Park, K. Karplus, C. Barrett, R. Hughey, D. Haussler, T. Hubbard,  
METHOD     and C. Chothia, http://cyrah.med.harvard.edu/~jong/assess_final.html, 1998.  
METHOD [5] S. Henikoff and J. C. Henikoff, JMB, vol 243, pp 574-578, Nov 1994.  
METHOD [6] K. Sjolander, K. Karplus, M. P. Brown, R. Hughey, A. Krogh, I. S.  
METHOD    Mian, and D. Haussler, CABIOS 12(4):327-345, 1996.  
METHOD   
METHOD   
METHOD We have submitted 3chy as the template for T0081.  With a score of  
METHOD -4.250, it was one of our top FSSP alignments.  While we have not  
METHOD calibrated these FSSP models, we estimate by analogy to our target98  
METHOD models that this structure is a false positive with roughly a 60%  
METHOD likelihood.  
METHOD   
METHOD We had a number of hits in this range (where we expect most to  
METHOD be false positives), but found that the known active site residues  
METHOD of T0081 only clustered nicely near the active site of 3chy.  Active  
METHOD site residues were taken from  
METHOD   
METHOD  Saadat D, et al.   
METHOD  Identification of catalytic bases in the active site of  
METHOD    Escherichia coli methylglyoxal synthase: cloning, expression, and  
METHOD    functional characterization of conserved aspartic acid residues.   
METHOD  Biochemistry. 1998 Jul 14; 37(28): 10074-10086.   
METHOD   
METHOD Our main competing structure for 3chy was 1auoA.  It displayed   
METHOD encouraging residue conservation in the core and clustered some of the  
METHOD active site residues fairly well.  Noting that 3chy and 1auoA are both  
METHOD composed of a central beta sheet sandwiched between alpha helices, we  
METHOD felt encouraged that we had the correct fold.  Since the 3chy alignment  
METHOD was the least disruptive and only single model predictions are being  
METHOD allowed for this CASP, we chose to 3chy over 1auoA.  
MODEL 1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 3chy 
ATOM      1  N   PRO     9      39.362  22.441   8.844  1.00  0.00              
ATOM      2  CA  PRO     9      39.866  21.059   8.959  1.00  0.00              
ATOM      3  C   PRO     9      41.199  20.759   8.249  1.00  0.00              
ATOM      4  O   PRO     9      41.543  20.967   7.074  1.00  0.00              
ATOM      5  N   ALA    10      42.080  20.206   9.027  1.00  0.00              
ATOM      6  CA  ALA    10      43.425  19.735   8.836  1.00  0.00              
ATOM      7  C   ALA    10      43.389  18.455   7.985  1.00  0.00              
ATOM      8  O   ALA    10      42.585  17.614   8.424  1.00  0.00              
ATOM      9  N   ARG    11      44.159  18.342   6.916  1.00  0.00              
ATOM     10  CA  ARG    11      44.119  17.105   6.147  1.00  0.00              
ATOM     11  C   ARG    11      44.704  15.915   6.915  1.00  0.00              
ATOM     12  O   ARG    11      44.551  14.758   6.475  1.00  0.00              
ATOM     13  N   LYS    12      45.355  16.227   8.047  1.00  0.00              
ATOM     14  CA  LYS    12      45.918  15.101   8.820  1.00  0.00              
ATOM     15  C   LYS    12      44.994  14.653   9.949  1.00  0.00              
ATOM     16  O   LYS    12      45.443  13.788  10.711  1.00  0.00              
ATOM     17  N   HIS    13      43.784  15.167   9.988  1.00  0.00              
ATOM     18  CA  HIS    13      42.800  14.764  10.998  1.00  0.00              
ATOM     19  C   HIS    13      42.770  13.224  10.991  1.00  0.00              
ATOM     20  O   HIS    13      42.647  12.618   9.899  1.00  0.00              
ATOM     21  N   ILE    14      42.807  12.585  12.143  1.00  0.00              
ATOM     22  CA  ILE    14      42.788  11.087  12.105  1.00  0.00              
ATOM     23  C   ILE    14      41.367  10.497  12.113  1.00  0.00              
ATOM     24  O   ILE    14      40.644  10.758  13.107  1.00  0.00              
ATOM     25  N   ALA    15      40.966   9.773  11.112  1.00  0.00              
ATOM     26  CA  ALA    15      39.620   9.225  11.057  1.00  0.00              
ATOM     27  C   ALA    15      39.548   7.793  11.557  1.00  0.00              
ATOM     28  O   ALA    15      40.526   7.087  11.313  1.00  0.00              
ATOM     29  N   LEU    16      38.438   7.363  12.131  1.00  0.00              
ATOM     30  CA  LEU    16      38.249   5.964  12.522  1.00  0.00              
ATOM     31  C   LEU    16      37.025   5.532  11.651  1.00  0.00              
ATOM     32  O   LEU    16      35.999   6.216  11.790  1.00  0.00              
ATOM     33  N   VAL    17      37.175   4.546  10.771  1.00  0.00              
ATOM     34  CA  VAL    17      36.051   4.078   9.925  1.00  0.00              
ATOM     35  C   VAL    17      35.540   2.750  10.572  1.00  0.00              
ATOM     36  O   VAL    17      36.331   1.796  10.630  1.00  0.00              
ATOM     37  N   ALA    18      34.309   2.680  10.936  1.00  0.00              
ATOM     38  CA  ALA    18      33.741   1.537  11.645  1.00  0.00              
ATOM     39  C   ALA    18      32.622   0.890  10.850  1.00  0.00              
ATOM     40  O   ALA    18      31.598   1.575  10.569  1.00  0.00              
ATOM     41  N   HIS    19      32.870  -0.392  10.518  1.00  0.00              
ATOM     42  CA  HIS    19      31.811  -1.156   9.804  1.00  0.00              
ATOM     43  C   HIS    19      32.151  -2.673   9.908  1.00  0.00              
ATOM     44  O   HIS    19      33.379  -2.849  10.028  1.00  0.00              
ATOM     45  N   ASP    20      31.125  -3.526   9.812  1.00  0.00              
ATOM     46  CA  ASP    20      31.552  -4.975   9.930  1.00  0.00              
ATOM     47  C   ASP    20      31.881  -5.497   8.543  1.00  0.00              
ATOM     48  O   ASP    20      32.194  -6.716   8.428  1.00  0.00              
ATOM     49  N   HIS    21      31.794  -4.730   7.494  1.00  0.00              
ATOM     50  CA  HIS    21      32.160  -5.228   6.162  1.00  0.00              
ATOM     51  C   HIS    21      33.489  -4.570   5.761  1.00  0.00              
ATOM     52  O   HIS    21      33.542  -3.331   5.611  1.00  0.00              
ATOM     53  N   LYS    23      34.513  -5.419   5.627  1.00  0.00              
ATOM     54  CA  LYS    23      35.826  -4.868   5.227  1.00  0.00              
ATOM     55  C   LYS    23      35.731  -4.168   3.854  1.00  0.00              
ATOM     56  O   LYS    23      36.451  -3.151   3.664  1.00  0.00              
ATOM     57  N   GLN    24      34.923  -4.589   2.911  1.00  0.00              
ATOM     58  CA  GLN    24      34.876  -3.922   1.618  1.00  0.00              
ATOM     59  C   GLN    24      34.343  -2.493   1.777  1.00  0.00              
ATOM     60  O   GLN    24      34.903  -1.568   1.134  1.00  0.00              
ATOM     61  N   MET    25      33.333  -2.345   2.624  1.00  0.00              
ATOM     62  CA  MET    25      32.758  -0.963   2.790  1.00  0.00              
ATOM     63  C   MET    25      33.811  -0.101   3.472  1.00  0.00              
ATOM     64  O   MET    25      33.937   1.070   3.053  1.00  0.00              
ATOM     65  N   LEU    26      34.540  -0.670   4.417  1.00  0.00              
ATOM     66  CA  LEU    26      35.630   0.118   5.108  1.00  0.00              
ATOM     67  C   LEU    26      36.665   0.560   4.066  1.00  0.00              
ATOM     68  O   LEU    26      37.153   1.694   4.152  1.00  0.00              
ATOM     69  N   MET    27      37.013  -0.284   3.113  1.00  0.00              
ATOM     70  CA  MET    27      37.960   0.012   2.052  1.00  0.00              
ATOM     71  C   MET    27      37.457   1.148   1.139  1.00  0.00              
ATOM     72  O   MET    27      38.208   2.013   0.704  1.00  0.00              
ATOM     73  N   SER    28      36.162   1.090   0.828  1.00  0.00              
ATOM     74  CA  SER    28      35.480   2.111   0.006  1.00  0.00              
ATOM     75  C   SER    28      35.620   3.493   0.667  1.00  0.00              
ATOM     76  O   SER    28      36.065   4.465   0.005  1.00  0.00              
ATOM     77  N   TRP    29      35.218   3.523   1.946  1.00  0.00              
ATOM     78  CA  TRP    29      35.304   4.818   2.693  1.00  0.00              
ATOM     79  C   TRP    29      36.745   5.384   2.742  1.00  0.00              
ATOM     80  O   TRP    29      37.048   6.587   2.562  1.00  0.00              
ATOM     81  N   VAL    30      37.664   4.462   3.055  1.00  0.00              
ATOM     82  CA  VAL    30      39.075   4.807   3.161  1.00  0.00              
ATOM     83  C   VAL    30      39.502   5.372   1.801  1.00  0.00              
ATOM     84  O   VAL    30      40.188   6.408   1.805  1.00  0.00              
ATOM     85  N   GLU    31      39.114   4.765   0.711  1.00  0.00              
ATOM     86  CA  GLU    31      39.513   5.290  -0.613  1.00  0.00              
ATOM     87  C   GLU    31      38.894   6.621  -0.959  1.00  0.00              
ATOM     88  O   GLU    31      39.549   7.463  -1.596  1.00  0.00              
ATOM     89  N   ARG    32      37.648   6.793  -0.551  1.00  0.00              
ATOM     90  CA  ARG    32      36.972   8.106  -0.812  1.00  0.00              
ATOM     91  C   ARG    32      37.692   9.168   0.080  1.00  0.00              
ATOM     92  O   ARG    32      37.897  10.237  -0.519  1.00  0.00              
ATOM     93  N   HIS    33      38.076   8.874   1.316  1.00  0.00              
ATOM     94  CA  HIS    33      38.729   9.936   2.089  1.00  0.00              
ATOM     95  C   HIS    33      40.062  10.286   1.425  1.00  0.00              
ATOM     96  O   HIS    33      40.446  11.454   1.383  1.00  0.00              
ATOM     97  N   GLN    34      40.693   9.191   0.947  1.00  0.00              
ATOM     98  CA  GLN    34      42.030   9.394   0.304  1.00  0.00              
ATOM     99  C   GLN    34      41.913  10.303  -0.900  1.00  0.00              
ATOM    100  O   GLN    34      42.791  11.175  -1.098  1.00  0.00              
ATOM    101  N   PRO    35      40.858  10.160  -1.652  1.00  0.00              
ATOM    102  CA  PRO    35      40.600  11.001  -2.853  1.00  0.00              
ATOM    103  C   PRO    35      40.427  12.446  -2.433  1.00  0.00              
ATOM    104  O   PRO    35      40.868  13.367  -3.183  1.00  0.00              
ATOM    105  N   LEU    36      39.876  12.711  -1.257  1.00  0.00              
ATOM    106  CA  LEU    36      39.697  14.104  -0.801  1.00  0.00              
ATOM    107  C   LEU    36      40.993  14.628  -0.176  1.00  0.00              
ATOM    108  O   LEU    36      40.941  15.839   0.062  1.00  0.00              
ATOM    109  N   LEU    37      42.011  13.875   0.101  1.00  0.00              
ATOM    110  CA  LEU    37      43.214  14.364   0.729  1.00  0.00              
ATOM    111  C   LEU    37      43.365  14.003   2.196  1.00  0.00              
ATOM    112  O   LEU    37      44.308  14.435   2.864  1.00  0.00              
ATOM    113  N   GLU    38      42.515  13.097   2.689  1.00  0.00              
ATOM    114  CA  GLU    38      42.513  12.608   4.071  1.00  0.00              
ATOM    115  C   GLU    38      43.092  11.179   4.090  1.00  0.00              
ATOM    116  O   GLU    38      42.423  10.214   3.709  1.00  0.00              
ATOM    117  N   GLN    39      44.347  11.108   4.510  1.00  0.00              
ATOM    118  CA  GLN    39      45.055   9.819   4.499  1.00  0.00              
ATOM    119  C   GLN    39      45.270   9.231   5.872  1.00  0.00              
ATOM    120  O   GLN    39      45.763   8.084   5.853  1.00  0.00              
ATOM    121  N   GLY    66      44.961   9.864   6.940  1.00  0.00              
ATOM    122  CA  GLY    66      45.240   9.226   8.268  1.00  0.00              
ATOM    123  C   GLY    66      43.925   8.527   8.652  1.00  0.00              
ATOM    124  O   GLY    66      43.141   9.235   9.320  1.00  0.00              
ATOM    125  N   PRO    67      43.802   7.288   8.270  1.00  0.00              
ATOM    126  CA  PRO    67      42.571   6.524   8.529  1.00  0.00              
ATOM    127  C   PRO    67      42.890   5.207   9.195  1.00  0.00              
ATOM    128  O   PRO    67      43.799   4.518   8.787  1.00  0.00              
ATOM    129  N   MET    68      42.136   4.822  10.188  1.00  0.00              
ATOM    130  CA  MET    68      42.217   3.555  10.885  1.00  0.00              
ATOM    131  C   MET    68      40.799   2.956  10.757  1.00  0.00              
ATOM    132  O   MET    68      39.847   3.703  10.521  1.00  0.00              
ATOM    133  N   GLY    69      40.678   1.692  10.972  1.00  0.00              
ATOM    134  CA  GLY    69      39.459   0.922  10.870  1.00  0.00              
ATOM    135  C   GLY    69      39.140   0.115  12.116  1.00  0.00              
ATOM    136  O   GLY    69      40.005  -0.339  12.837  1.00  0.00              
ATOM    137  N   GLY    70      37.839  -0.126  12.307  1.00  0.00              
ATOM    138  CA  GLY    70      37.315  -0.941  13.444  1.00  0.00              
ATOM    139  C   GLY    70      36.177  -1.773  12.840  1.00  0.00              
ATOM    140  O   GLY    70      35.490  -1.334  11.894  1.00  0.00              
ATOM    141  N   ASP    71      35.932  -2.955  13.464  1.00  0.00              
ATOM    142  CA  ASP    71      34.899  -3.826  12.928  1.00  0.00              
ATOM    143  C   ASP    71      33.590  -3.875  13.618  1.00  0.00              
ATOM    144  O   ASP    71      32.622  -4.474  13.059  1.00  0.00              
ATOM    145  N   GLN    72      33.412  -3.214  14.726  1.00  0.00              
ATOM    146  CA  GLN    72      32.148  -3.146  15.498  1.00  0.00              
ATOM    147  C   GLN    72      32.288  -2.046  16.576  1.00  0.00              
ATOM    148  O   GLN    72      33.421  -1.544  16.671  1.00  0.00              
ATOM    149  N   GLN    73      31.193  -1.703  17.245  1.00  0.00              
ATOM    150  CA  GLN    73      31.258  -0.630  18.251  1.00  0.00              
ATOM    151  C   GLN    73      32.303  -0.843  19.344  1.00  0.00              
ATOM    152  O   GLN    73      33.030   0.066  19.825  1.00  0.00              
ATOM    153  N   VAL    74      32.387  -2.138  19.762  1.00  0.00              
ATOM    154  CA  VAL    74      33.368  -2.487  20.841  1.00  0.00              
ATOM    155  C   VAL    74      34.819  -2.342  20.414  1.00  0.00              
ATOM    156  O   VAL    74      35.656  -1.755  21.094  1.00  0.00              
ATOM    157  N   GLY    75      35.170  -2.804  19.236  1.00  0.00              
ATOM    158  CA  GLY    75      36.476  -2.684  18.631  1.00  0.00              
ATOM    159  C   GLY    75      36.825  -1.173  18.519  1.00  0.00              
ATOM    160  O   GLY    75      37.913  -0.665  18.806  1.00  0.00              
ATOM    161  N   ALA    76      35.772  -0.428  18.112  1.00  0.00              
ATOM    162  CA  ALA    76      36.037   1.042  17.955  1.00  0.00              
ATOM    163  C   ALA    76      36.410   1.713  19.270  1.00  0.00              
ATOM    164  O   ALA    76      37.293   2.564  19.275  1.00  0.00              
ATOM    165  N   LEU    77      35.662   1.376  20.338  1.00  0.00              
ATOM    166  CA  LEU    77      35.960   2.015  21.658  1.00  0.00              
ATOM    167  C   LEU    77      37.354   1.596  22.129  1.00  0.00              
ATOM    168  O   LEU    77      38.031   2.411  22.719  1.00  0.00              
ATOM    169  N   ILE    78      37.755   0.352  21.832  1.00  0.00              
ATOM    170  CA  ILE    78      39.113  -0.160  22.223  1.00  0.00              
ATOM    171  C   ILE    78      40.124   0.800  21.626  1.00  0.00              
ATOM    172  O   ILE    78      41.037   1.309  22.303  1.00  0.00              
ATOM    173  N   SER    79      39.897   1.092  20.343  1.00  0.00              
ATOM    174  CA  SER    79      40.793   2.038  19.631  1.00  0.00              
ATOM    175  C   SER    79      40.685   3.490  20.033  1.00  0.00              
ATOM    176  O   SER    79      41.718   4.143  20.206  1.00  0.00              
ATOM    177  N   GLU    80      39.522   4.072  20.168  1.00  0.00              
ATOM    178  CA  GLU    80      39.387   5.473  20.520  1.00  0.00              
ATOM    179  C   GLU    80      40.033   5.733  21.874  1.00  0.00              
ATOM    180  O   GLU    80      40.452   6.868  22.159  1.00  0.00              
ATOM    181  N   GLY    81      43.333   7.179  22.113  1.00  0.00              
ATOM    182  CA  GLY    81      43.361   8.629  21.957  1.00  0.00              
ATOM    183  C   GLY    81      43.953   8.910  20.549  1.00  0.00              
ATOM    184  O   GLY    81      44.469   8.079  19.765  1.00  0.00              
ATOM    185  N   LYS    82      43.849  10.202  20.265  1.00  0.00              
ATOM    186  CA  LYS    82      44.325  10.838  19.043  1.00  0.00              
ATOM    187  C   LYS    82      43.362  10.945  17.870  1.00  0.00              
ATOM    188  O   LYS    82      43.806  11.546  16.864  1.00  0.00              
ATOM    189  N   ILE    83      42.147  10.469  17.958  1.00  0.00              
ATOM    190  CA  ILE    83      41.220  10.545  16.803  1.00  0.00              
ATOM    191  C   ILE    83      40.524  11.895  16.659  1.00  0.00              
ATOM    192  O   ILE    83      40.238  12.565  17.695  1.00  0.00              
ATOM    193  N   ASP    84      40.269  12.259  15.415  1.00  0.00              
ATOM    194  CA  ASP    84      39.540  13.518  15.178  1.00  0.00              
ATOM    195  C   ASP    84      38.156  13.369  14.601  1.00  0.00              
ATOM    196  O   ASP    84      37.432  14.375  14.569  1.00  0.00              
ATOM    197  N   VAL    85      37.824  12.155  14.113  1.00  0.00              
ATOM    198  CA  VAL    85      36.472  12.087  13.481  1.00  0.00              
ATOM    199  C   VAL    85      36.126  10.619  13.393  1.00  0.00              
ATOM    200  O   VAL    85      37.084   9.845  13.111  1.00  0.00              
ATOM    201  N   LEU    86      34.908  10.230  13.553  1.00  0.00              
ATOM    202  CA  LEU    86      34.446   8.846  13.444  1.00  0.00              
ATOM    203  C   LEU    86      33.362   8.735  12.352  1.00  0.00              
ATOM    204  O   LEU    86      32.463   9.597  12.285  1.00  0.00              
ATOM    205  N   ILE    87      33.462   7.726  11.540  1.00  0.00              
ATOM    206  CA  ILE    87      32.425   7.428  10.502  1.00  0.00              
ATOM    207  C   ILE    87      31.961   6.023  10.934  1.00  0.00              
ATOM    208  O   ILE    87      32.862   5.119  10.953  1.00  0.00              
ATOM    209  N   PHE    88      30.725   5.832  11.232  1.00  0.00              
ATOM    210  CA  PHE    88      30.294   4.516  11.687  1.00  0.00              
ATOM    211  C   PHE    88      29.008   4.129  11.043  1.00  0.00              
ATOM    212  O   PHE    88      28.099   4.946  10.856  1.00  0.00              
ATOM    213  N   PHE    89      28.933   2.833  10.740  1.00  0.00              
ATOM    214  CA  PHE    89      27.670   2.307  10.177  1.00  0.00              
ATOM    215  C   PHE    89      26.708   2.177  11.360  1.00  0.00              
ATOM    216  O   PHE    89      27.013   1.925  12.520  1.00  0.00              
ATOM    217  N   TRP    90      25.423   2.309  11.030  1.00  0.00              
ATOM    218  CA  TRP    90      24.332   2.152  11.998  1.00  0.00              
ATOM    219  C   TRP    90      24.194   0.680  12.438  1.00  0.00              
ATOM    220  O   TRP    90      23.880   0.479  13.618  1.00  0.00              
ATOM    221  N   ASP    91      24.373  -0.250  11.484  1.00  0.00              
ATOM    222  CA  ASP    91      24.127  -1.669  11.869  1.00  0.00              
ATOM    223  C   ASP    91      25.385  -2.481  12.035  1.00  0.00              
ATOM    224  O   ASP    91      26.003  -2.812  11.008  1.00  0.00              
ATOM    225  N   ASP    99      25.713  -2.871  13.261  1.00  0.00              
ATOM    226  CA  ASP    99      26.937  -3.652  13.507  1.00  0.00              
ATOM    227  C   ASP    99      26.585  -4.598  14.663  1.00  0.00              
ATOM    228  O   ASP    99      25.770  -4.130  15.440  1.00  0.00              
ATOM    229  N   PRO   100      27.194  -5.761  14.684  1.00  0.00              
ATOM    230  CA  PRO   100      26.951  -6.667  15.808  1.00  0.00              
ATOM    231  C   PRO   100      27.632  -6.220  17.066  1.00  0.00              
ATOM    232  O   PRO   100      28.553  -5.385  17.046  1.00  0.00              
ATOM    233  N   ASP   101      27.210  -6.737  18.198  1.00  0.00              
ATOM    234  CA  ASP   101      27.809  -6.494  19.527  1.00  0.00              
ATOM    235  C   ASP   101      27.507  -5.076  20.013  1.00  0.00              
ATOM    236  O   ASP   101      26.842  -5.038  21.088  1.00  0.00              
ATOM    237  N   VAL   102      27.979  -4.076  19.335  1.00  0.00              
ATOM    238  CA  VAL   102      27.643  -2.689  19.746  1.00  0.00              
ATOM    239  C   VAL   102      27.302  -1.965  18.445  1.00  0.00              
ATOM    240  O   VAL   102      28.275  -1.871  17.652  1.00  0.00              
ATOM    241  N   LYS   103      26.052  -1.593  18.263  1.00  0.00              
ATOM    242  CA  LYS   103      25.684  -0.919  16.971  1.00  0.00              
ATOM    243  C   LYS   103      26.082   0.570  16.926  1.00  0.00              
ATOM    244  O   LYS   103      26.697   1.065  17.865  1.00  0.00              
ATOM    245  N   ALA   104      25.734   1.221  15.805  1.00  0.00              
ATOM    246  CA  ALA   104      26.101   2.638  15.628  1.00  0.00              
ATOM    247  C   ALA   104      25.529   3.554  16.676  1.00  0.00              
ATOM    248  O   ALA   104      26.321   4.409  17.160  1.00  0.00              
ATOM    249  N   LEU   105      24.277   3.445  17.072  1.00  0.00              
ATOM    250  CA  LEU   105      23.667   4.297  18.071  1.00  0.00              
ATOM    251  C   LEU   105      24.308   4.080  19.452  1.00  0.00              
ATOM    252  O   LEU   105      24.544   5.062  20.197  1.00  0.00              
ATOM    253  N   LEU   106      24.612   2.795  19.750  1.00  0.00              
ATOM    254  CA  LEU   106      25.256   2.486  21.052  1.00  0.00              
ATOM    255  C   LEU   106      26.651   3.057  21.124  1.00  0.00              
ATOM    256  O   LEU   106      27.053   3.662  22.138  1.00  0.00              
ATOM    257  N   ARG   107      27.437   2.943  20.046  1.00  0.00              
ATOM    258  CA  ARG   107      28.768   3.536  19.955  1.00  0.00              
ATOM    259  C   ARG   107      28.672   5.066  20.136  1.00  0.00              
ATOM    260  O   ARG   107      29.438   5.670  20.902  1.00  0.00              
ATOM    261  N   LEU   108      27.775   5.724  19.410  1.00  0.00              
ATOM    262  CA  LEU   108      27.608   7.185  19.503  1.00  0.00              
ATOM    263  C   LEU   108      27.226   7.630  20.932  1.00  0.00              
ATOM    264  O   LEU   108      27.806   8.595  21.448  1.00  0.00              
ATOM    265  N   ALA   109      26.294   6.967  21.578  1.00  0.00              
ATOM    266  CA  ALA   109      25.897   7.338  22.948  1.00  0.00              
ATOM    267  C   ALA   109      27.072   7.225  23.885  1.00  0.00              
ATOM    268  O   ALA   109      27.280   8.034  24.803  1.00  0.00              
ATOM    269  N   THR   110      27.912   6.218  23.696  1.00  0.00              
ATOM    270  CA  THR   110      29.090   5.952  24.525  1.00  0.00              
ATOM    271  C   THR   110      30.134   7.062  24.330  1.00  0.00              
ATOM    272  O   THR   110      30.717   7.489  25.330  1.00  0.00              
ATOM    273  N   VAL   111      30.325   7.459  23.070  1.00  0.00              
ATOM    274  CA  VAL   111      31.273   8.514  22.765  1.00  0.00              
ATOM    275  C   VAL   111      30.775   9.833  23.380  1.00  0.00              
ATOM    276  O   VAL   111      31.630  10.512  23.999  1.00  0.00              
ATOM    277  N   TRP   112      33.721  13.428  24.236  1.00  0.00              
ATOM    278  CA  TRP   112      32.348  13.830  23.987  1.00  0.00              
ATOM    279  C   TRP   112      32.155  14.759  22.811  1.00  0.00              
ATOM    280  O   TRP   112      30.981  14.746  22.414  1.00  0.00              
ATOM    281  N   ASN   113      33.138  15.444  22.324  1.00  0.00              
ATOM    282  CA  ASN   113      32.904  16.357  21.214  1.00  0.00              
ATOM    283  C   ASN   113      33.317  15.765  19.866  1.00  0.00              
ATOM    284  O   ASN   113      33.183  16.450  18.813  1.00  0.00              
ATOM    285  N   ILE   114      33.858  14.547  19.842  1.00  0.00              
ATOM    286  CA  ILE   114      34.280  14.026  18.537  1.00  0.00              
ATOM    287  C   ILE   114      33.151  13.992  17.500  1.00  0.00              
ATOM    288  O   ILE   114      32.079  13.374  17.823  1.00  0.00              
ATOM    289  N   PRO   115      33.402  14.490  16.312  1.00  0.00              
ATOM    290  CA  PRO   115      32.378  14.433  15.241  1.00  0.00              
ATOM    291  C   PRO   115      32.116  12.951  14.861  1.00  0.00              
ATOM    292  O   PRO   115      33.070  12.138  14.777  1.00  0.00              
ATOM    293  N   VAL   116      30.834  12.648  14.720  1.00  0.00              
ATOM    294  CA  VAL   116      30.413  11.263  14.328  1.00  0.00              
ATOM    295  C   VAL   116      29.491  11.346  13.119  1.00  0.00              
ATOM    296  O   VAL   116      28.431  12.024  13.254  1.00  0.00              
ATOM    297  N   ALA   117      29.882  10.725  12.031  1.00  0.00              
ATOM    298  CA  ALA   117      29.014  10.711  10.844  1.00  0.00              
ATOM    299  C   ALA   117      28.466   9.248  10.782  1.00  0.00              
ATOM    300  O   ALA   117      29.268   8.298  10.782  1.00  0.00              
ATOM    301  N   THR   118      27.177   9.196  10.824  1.00  0.00              
ATOM    302  CA  THR   118      26.454   7.897  10.823  1.00  0.00              
ATOM    303  C   THR   118      26.181   7.489   9.372  1.00  0.00              
ATOM    304  O   THR   118      25.660   8.324   8.595  1.00  0.00              
ATOM    305  N   ASN   119      26.453   6.253   9.029  1.00  0.00              
ATOM    306  CA  ASN   119      26.201   5.679   7.693  1.00  0.00              
ATOM    307  C   ASN   119      25.054   4.634   7.821  1.00  0.00              
ATOM    308  O   ASN   119      25.146   3.832   8.758  1.00  0.00              
ATOM    309  N   VAL   120      24.156   4.731   6.867  1.00  0.00              
ATOM    310  CA  VAL   120      23.034   3.754   6.917  1.00  0.00              
ATOM    311  C   VAL   120      22.658   3.286   5.495  1.00  0.00              
ATOM    312  O   VAL   120      22.918   3.990   4.532  1.00  0.00              
ATOM    313  N   ALA   121      22.081   2.084   5.389  1.00  0.00              
ATOM    314  CA  ALA   121      21.651   1.535   4.103  1.00  0.00              
ATOM    315  C   ALA   121      20.289   2.152   3.707  1.00  0.00              
ATOM    316  O   ALA   121      19.923   2.184   2.516  1.00  0.00              
ATOM    317  N   THR   122      19.557   2.631   4.676  1.00  0.00              
ATOM    318  CA  THR   122      18.256   3.232   4.304  1.00  0.00              
ATOM    319  C   THR   122      17.839   4.225   5.345  1.00  0.00              
ATOM    320  O   THR   122      17.866   3.852   6.558  1.00  0.00              
ATOM    321  N   ALA   123      17.467   5.396   4.880  1.00  0.00              
ATOM    322  CA  ALA   123      17.033   6.429   5.834  1.00  0.00              
ATOM    323  C   ALA   123      15.637   6.134   6.401  1.00  0.00              
ATOM    324  O   ALA   123      14.762   5.723   5.599  1.00  0.00              
ATOM    325  N   ASP   124      15.418   6.298   7.677  1.00  0.00              
ATOM    326  CA  ASP   124      14.116   6.101   8.296  1.00  0.00              
ATOM    327  C   ASP   124      14.018   7.299   9.256  1.00  0.00              
ATOM    328  O   ASP   124      14.956   7.453  10.028  1.00  0.00              
ATOM    329  N   PHE   125      12.914   8.000   9.175  1.00  0.00              
ATOM    330  CA  PHE   125      12.736   9.158  10.050  1.00  0.00              
ATOM    331  C   PHE   125      13.114   8.919  11.517  1.00  0.00              
ATOM    332  O   PHE   125      13.796   9.749  12.145  1.00  0.00              
ATOM    333  N   ILE   126      12.639   7.796  12.068  1.00  0.00              
ATOM    334  CA  ILE   126      12.939   7.544  13.491  1.00  0.00              
ATOM    335  C   ILE   126      14.427   7.355  13.743  1.00  0.00              
ATOM    336  O   ILE   126      14.817   7.763  14.813  1.00  0.00              
ATOM    337  N   ILE   127      15.071   6.695  12.784  1.00  0.00              
ATOM    338  CA  ILE   127      16.507   6.453  12.916  1.00  0.00              
ATOM    339  C   ILE   127      17.280   7.793  12.913  1.00  0.00              
ATOM    340  O   ILE   127      18.175   7.957  13.766  1.00  0.00              
ATOM    341  N   GLN   128      16.880   8.670  11.992  1.00  0.00              
ATOM    342  CA  GLN   128      17.505  10.019  11.844  1.00  0.00              
ATOM    343  C   GLN   128      17.314  10.847  13.133  1.00  0.00              
ATOM    344  O   GLN   128      18.317  11.396  13.652  1.00  0.00              
ATOM    345  N   SER   129      16.111  10.817  13.651  1.00  0.00              
ATOM    346  CA  SER   129      15.883  11.572  14.942  1.00  0.00              
ATOM    347  C   SER   129      16.639  10.938  16.108  1.00  0.00              
ATOM    348  O   SER   129      17.268  11.715  16.876  1.00  0.00              
ATOM    349  N   PRO   130      23.302  12.888  19.434  1.00  0.00              
ATOM    350  CA  PRO   130      24.604  13.559  19.226  1.00  0.00              
ATOM    351  C   PRO   130      25.294  13.413  17.883  1.00  0.00              
ATOM    352  O   PRO   130      26.436  13.918  17.765  1.00  0.00              
ATOM    353  N   HIS   131      24.707  12.715  16.941  1.00  0.00              
ATOM    354  CA  HIS   131      25.343  12.484  15.626  1.00  0.00              
ATOM    355  C   HIS   131      25.588  13.829  14.937  1.00  0.00              
ATOM    356  O   HIS   131      24.666  14.688  14.993  1.00  0.00              
ATOM    357  N   PHE   132      26.740  13.952  14.352  1.00  0.00              
ATOM    358  CA  PHE   132      27.087  15.187  13.619  1.00  0.00              
ATOM    359  C   PHE   132      26.380  15.218  12.260  1.00  0.00              
ATOM    360  O   PHE   132      26.112  16.337  11.757  1.00  0.00              
ATOM    361  N   ASN   133      26.078  14.086  11.652  1.00  0.00              
ATOM    362  CA  ASN   133      25.382  14.046  10.337  1.00  0.00              
ATOM    363  C   ASN   133      25.113  12.523  10.086  1.00  0.00              
ATOM    364  O   ASN   133      25.485  11.656  10.909  1.00  0.00              
ATOM    365  N   ASP   134      24.447  12.337   8.976  1.00  0.00              
ATOM    366  CA  ASP   134      24.071  10.948   8.560  1.00  0.00              
ATOM    367  C   ASP   134      24.075  10.997   7.041  1.00  0.00              
ATOM    368  O   ASP   134      23.737  12.036   6.407  1.00  0.00              
ATOM    369  N   ALA   135      24.445   9.854   6.432  1.00  0.00              
ATOM    370  CA  ALA   135      24.577   9.675   4.999  1.00  0.00              
ATOM    371  C   ALA   135      24.059   8.270   4.629  1.00  0.00              
ATOM    372  O   ALA   135      24.289   7.345   5.424  1.00  0.00              
ATOM    373  N   VAL   136      23.413   8.184   3.453  1.00  0.00              
ATOM    374  CA  VAL   136      22.876   6.865   3.039  1.00  0.00              
ATOM    375  C   VAL   136      23.880   6.352   2.040  1.00  0.00              
ATOM    376  O   VAL   136      24.335   7.132   1.146  1.00  0.00              
ATOM    377  N   ASP   137      24.219   5.100   2.225  1.00  0.00              
ATOM    378  CA  ASP   137      25.156   4.401   1.313  1.00  0.00              
ATOM    379  C   ASP   137      24.337   3.685   0.216  1.00  0.00              
ATOM    380  O   ASP   137      23.129   3.333   0.380  1.00  0.00              
ATOM    381  N   PRO   141      24.885   3.493  -0.970  1.00  0.00              
ATOM    382  CA  PRO   141      26.216   3.868  -1.426  1.00  0.00              
ATOM    383  C   PRO   141      26.317   5.356  -1.715  1.00  0.00              
ATOM    384  O   PRO   141      25.312   5.973  -2.095  1.00  0.00              
ATOM    385  N   ASP   142      27.491   5.923  -1.562  1.00  0.00              
ATOM    386  CA  ASP   142      27.723   7.352  -1.804  1.00  0.00              
ATOM    387  C   ASP   142      29.048   7.516  -2.533  1.00  0.00              
ATOM    388  O   ASP   142      29.906   6.619  -2.480  1.00  0.00              
ATOM    389  N   TYR   143      29.184   8.632  -3.157  1.00  0.00              
ATOM    390  CA  TYR   143      30.360   9.032  -3.940  1.00  0.00              
ATOM    391  C   TYR   143      31.255   9.987  -3.166  1.00  0.00              
ATOM    392  O   TYR   143      30.894  10.429  -2.040  1.00  0.00              
ATOM    393  N   GLN   144      32.436  10.259  -3.751  1.00  0.00              
ATOM    394  CA  GLN   144      33.347  11.198  -3.055  1.00  0.00              
ATOM    395  C   GLN   144      32.704  12.573  -2.872  1.00  0.00              
ATOM    396  O   GLN   144      32.800  13.201  -1.800  1.00  0.00              
ATOM    397  N   ARG   145      32.020  13.057  -3.879  1.00  0.00              
ATOM    398  CA  ARG   145      31.404  14.377  -3.800  1.00  0.00              
ATOM    399  C   ARG   145      30.399  14.456  -2.664  1.00  0.00              
ATOM    400  O   ARG   145      30.346  15.504  -2.029  1.00  0.00              
ATOM    401  N   TYR   146      29.619  13.396  -2.500  1.00  0.00              
ATOM    402  CA  TYR   146      28.582  13.391  -1.467  1.00  0.00              
ATOM    403  C   TYR   146      29.288  13.358  -0.085  1.00  0.00              
ATOM    404  O   TYR   146      28.871  14.081   0.843  1.00  0.00              
ATOM    405  N   LEU   147      30.342  12.550   0.005  1.00  0.00              
ATOM    406  CA  LEU   147      31.042  12.508   1.312  1.00  0.00              
ATOM    407  C   LEU   147      31.648  13.879   1.635  1.00  0.00              
ATOM    408  O   LEU   147      31.647  14.341   2.794  1.00  0.00              
ATOM    409  N   ALA   148      32.202  14.520   0.561  1.00  0.00              
ATOM    410  CA  ALA   148      32.856  15.808   0.769  1.00  0.00              
ATOM    411  C   ALA   148      31.881  16.853   1.285  1.00  0.00              
ATOM    412  O   ALA   148      32.180  17.670   2.148  1.00  0.00              
ATOM    413  N   ASP   149      30.714  16.736   0.732  1.00  0.00              
ATOM    414  CA  ASP   149      29.605  17.588   1.072  1.00  0.00              
ATOM    415  C   ASP   149      29.205  17.388   2.512  1.00  0.00              
ATOM    416  O   ASP   149      28.988  18.393   3.220  1.00  0.00              
ATOM    417  N   ARG   150      29.112  16.170   2.931  1.00  0.00              
ATOM    418  CA  ARG   150      28.739  15.856   4.301  1.00  0.00              
ATOM    419  C   ARG   150      29.837  16.373   5.241  1.00  0.00              
ATOM    420  O   ARG   150      29.481  16.972   6.273  1.00  0.00              
ATOM    421  N   LEU   151      31.088  16.119   4.924  1.00  0.00              
ATOM    422  CA  LEU   151      32.181  16.552   5.780  1.00  0.00              
ATOM    423  C   LEU   151      32.194  18.073   5.884  1.00  0.00              
ATOM    424  O   LEU   151      32.384  18.555   7.024  1.00  0.00              
ATOM    425  N   LYS   152      32.086  18.744   4.731  1.00  0.00              
ATOM    426  CA  LYS   152      32.096  20.222   4.803  1.00  0.00              
ATOM    427  C   LYS   152      30.973  20.816   5.677  1.00  0.00              
ATOM    428  O   LYS   152      31.186  21.802   6.436  1.00  0.00              
END
